Rroxscaffold_1G00040880

Rab3 GTPase-activating protein catalytic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0004994
Physical Location & Seq
Reverse (-)
58645281 .. 58650737
5457 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00040880.1

Sequence Viewer

Length: 2046 bp
ATGGAGTCCCCCTCCTTCGTATCCAAAGCAAGGACAGCCTTCCATTCCGCCGCGGCTAAAGCGGAGCGAGTTCTCTCTGACTTGAAGCAACCCGATCGCCCAGATTCCGATAGGACGTCGCCGGGGAGTTTGATCCAGCAAGCCGAGGATGAATCGCCGGGGGAGTCGAGGGGTTTCCATGAATCAAAGGCTTTGAGGTGGAGACCTCCGAATATAGGGACAAAGCAGGAATGGCAGGACAGGAAGCAAGAATGGCAGGATAAGTTGAGGAATATTGGGAAAGGAAAGAAAGGAGCTGAAGATACAGAGAAGGCCGAGTATTCATCCATGGCTGTTCCTTATTATGATGAAAATTTGTACATTCTGAACATGAAAAATGATATGGAAGCAAAGGGGGCAGAATTAATTCCCTCAGTTGAAAGCTTAGCTGCGGACAACATAGTGATTCCGCCATTATCTGTTATGAGGCAATTGGCCACAGCTGTTGAGAAATTCCTCACCAGTCAGAGAGAGGGGGGTCTGAGTCTCTCTGCAGTGAAGTCGTTAGTGCTTCGTGAAAAGGATGAAAAGCCATCTGATTTTGGTCATAATGAGAAAGTCCTATCATTGATTCACTCTCTATTTGATGCAGAGGGAAATTTTCTAAGGCGGAAGATCGATTCTGGTTCAGACACGATTACCACGGCATCTATACCAAAAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTAGTTAAGTTAGCTGAAGTCATCGGGAGCTTCAGAACCCTTAAGAAAATGACACTGTTTTGGTGTAGTGTCGTTTCCGAACTTAGAAGACTTTGGTCTGAAGAAGCATATGTACCTAGCATTCCTGTGGATGAGATTCCAGATCTGAATTCTTGTCTTTTGTACCAGCAGTTGCAAGTTATCAATTGTTGTGTTTCCAGGAAAAGGCGACGTGATATTGCCACTGAAACACTGGAGTTTGTAATTAGAGAAGCCAGTCCAAACGCTGAAGAATCATCCGTTTCTACAGACAATGCTGCGGGCCCTATTTTGTATGCTCGAATAAGCACTGGGGAACTGGTTCTCCGATTAGGTGCTGATCGCCCATACGGTAACCTAAAAATGTTGGAAACTGGTGAACCTATGTATACCCCTGTAACTCAGGAAGGACCTTTACTTACTGAAGATCTGATCAAGGAAACAGAGGAGTTTGTGCTTCGAACAGGAAGTGTTGGTGCTGGATGTTCTCAACTCCTCTCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGATTTTGTTAGATGGCATTCTCCTCCCGACTGGACAGAGGCTGAGCCAAGTACCGAGGCTGAATCTCTGGATGGTAATGATGTATCATCCACAAGAGGCCAATTAAGTAGCCGAATGCAAAAAGCAGGCAATCTCTGGCGTGAGCTATGGGATACATCCAAACCAGTTCCAGCAGTAAAACAAGTACCCCTCTTTGACGAGGACTTAGCTGTGGAAGGTATTCTGGATGGTTTTGAGGACATATCACCTTCTGAGCTTTTTGAGCAGCTGTTTATTTCTTTGCTTGGTTTAGGGTTTGTAATTGCTGAGGCCAAATTGTCCACTAACAGCGATTTTTCAAAGCTGTTCTATGAATGCAAGGACTTTGTGGTATCCACTTGTCAAGGCAAAATGTGGACAGAGAAGGTTGACGAGCTTTGTCAGGTATTCGAGACAGTTGAGGCTATGATACTCAATCCAGAGGAAGTCCTAAGAATAATGAAGCAGCCGGAAGAAACCATGACCCCTTCTCCTTCTAGTGAACCAAAAAGTCGTTTCAGGCGGCTGACCCTCAACTTCGGTGGCAAAGATAGACAGTTGAAAAAATCAGCTTCTAAGGACCAGAAGAACTCACAGAGCCCTGGTAGCCAACCATTTTCAAGTTTCTTTGACAACAAGTCATCATTATTTTCAAAAAAGCCTCCTAAGCCTGAAAGTGCATCCCCTGTTGAAAAACCGTCAATTACGGAAGACAATGATTGGACAGTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BSD Rab3-GTPase_cat

Protein Analysis

681

Amino Acids

75.89

Weight (kDa)

5.0

Isoelectric Point (pI)

54.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rab3-GTPase_cat PF13890 359 - 509 1.6e-50 Rab3 GTPase-activating protein catalytic subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 119
AccI GTMKAC 1 cut(s) 1136
AccII CGCG 1 cut(s) 53
AciI CCGC 9 cut(s) 48, 51, 53, 62, 431, 449, 649, 1028, 1834
AclWI GGATC 1 cut(s) 127
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 4 cut(s) 352, 491, 637, 877
AcuI CTGAAG 6 cut(s) 318, 745, 765, 849, 1017, 1191
AcyI GRCGYC 1 cut(s) 116
AfaI GTAC 5 cut(s) 359, 843, 893, 1345, 1479
AfiI CCNNNNNNNGG 3 cut(s) 30, 215, 933
AflII CTTAAG 1 cut(s) 770
AgsI TTSAA 8 cut(s) 85, 419, 1264, 1632, 1873, 1932, 1965, 2003
AhdI GACNNNNNGTC 1 cut(s) 1948
AjiI CACGTC 1 cut(s) 941
AjnI CCWGG 3 cut(s) 926, 1276, 1912
AloI GAACNNNNNNTCC 2 cut(s) 1056, 1088
Alw21I GWGCWC 1 cut(s) 715
Alw26I GTCTC 3 cut(s) 196, 530, 1718
AlwI GGATC 1 cut(s) 127
AlwNI CAGNNNCTG 1 cut(s) 1334
AoxI GGCC 5 cut(s) 312, 474, 1030, 1390, 1602
ApaI GGGCCC 1 cut(s) 1034
ApeKI GCWGC 5 cut(s) 428, 1025, 1268, 1558, 1777
ApoI RAATTY 4 cut(s) 352, 491, 637, 877
AseI ATTAAT 1 cut(s) 404
Asp700I GAANNNNTTC 3 cut(s) 405, 1068, 1512
AspS9I GGNCC 4 cut(s) 1030, 1031, 1157, 1891
AsuC2I CCSGG 2 cut(s) 123, 159
AsuHPI GGTGA 3 cut(s) 490, 1136, 1530
AsuII TTCGAA 1 cut(s) 1207
AvaII GGWCC 2 cut(s) 1157, 1891
BaeGI GKGCMC 1 cut(s) 1034
BalI TGGCCA 1 cut(s) 476
BanII GRGCYC 2 cut(s) 1034, 1913
BarI GAAGNNNNNNTAC 4 cut(s) 825, 857, 1146, 1178
BbsI GAAGAC 2 cut(s) 823, 2028
Bbv12I GWGCWC 1 cut(s) 715
BbvCI CCTCAGC 1 cut(s) 1599
BbvI GCAGC 5 cut(s) 415, 1012, 1255, 1570, 1789
BccI CCATC 4 cut(s) 580, 1299, 1358, 1514
BceAI ACGGC 1 cut(s) 699
BcgI CGANNNNNNTGC 4 cut(s) 77, 111, 522, 556
BciT130I CCWGG 3 cut(s) 928, 1278, 1914
BciVI GTATCC 3 cut(s) 31, 1438, 1675
BclI TGATCA 1 cut(s) 1179
BcnI CCSGG 2 cut(s) 123, 159
BcoDI GTCTC 3 cut(s) 196, 530, 1718
BfaI CTAG 2 cut(s) 846, 1809
BfmI CTRYAG 2 cut(s) 531, 1014
BfrI CTTAAG 1 cut(s) 770
BfuI GTATCC 3 cut(s) 31, 1438, 1675
BglII AGATCT 2 cut(s) 871, 1174
BisI GCNGC 8 cut(s) 51, 54, 429, 1026, 1269, 1559, 1778, 1835
BlpI GCTNAGC 2 cut(s) 424, 1335
BlsI GCNGC 8 cut(s) 52, 55, 430, 1027, 1270, 1560, 1779, 1836
Bme1390I CCNGG 5 cut(s) 123, 159, 928, 1278, 1914
Bme18I GGWCC 2 cut(s) 1157, 1891
BmeRI GACNNNNNGTC 1 cut(s) 1948
BmgBI CACGTC 1 cut(s) 941
BmgT120I GGNCC 4 cut(s) 1030, 1031, 1157, 1891
BmiI GGNNCC 1 cut(s) 1032
BmrFI CCNGG 5 cut(s) 123, 159, 928, 1278, 1914
BmrI ACTGGG 1 cut(s) 1068
BmsI GCATC 3 cut(s) 616, 695, 2000
BmuI ACTGGG 1 cut(s) 1068
BoxI GACNNNNGTC 1 cut(s) 823
BpiI GAAGAC 2 cut(s) 823, 2028
BplI GAGNNNNNCTC 1 cut(s) 28
BpmI CTGGAG 1 cut(s) 983
Bpu10I CCTNAGC 2 cut(s) 1599, 1977
Bpu1102I GCTNAGC 2 cut(s) 424, 1335
Bpu14I TTCGAA 1 cut(s) 1207
BpuMI CCSGG 2 cut(s) 123, 159
Bsa29I ATCGAT 1 cut(s) 657
BsaHI GRCGYC 1 cut(s) 116
BsaI GGTCTC 1 cut(s) 196
BsaJI CCNNGG 8 cut(s) 51, 122, 144, 158, 327, 681, 1347, 1912
BsaXI ACNNNNNCTCC 4 cut(s) 1056, 1086, 1786, 1816
Bsc4I CCNNNNNNNGG 3 cut(s) 30, 215, 933
Bse1I ACTGG 8 cut(s) 501, 966, 984, 1063, 1071, 1126, 1328, 1457
BseBI CCWGG 3 cut(s) 928, 1278, 1914
BseCI ATCGAT 1 cut(s) 657
BseDI CCNNGG 8 cut(s) 51, 122, 144, 158, 327, 681, 1347, 1912
BseLI CCNNNNNNNGG 3 cut(s) 30, 215, 933
BseMII CTCAG 6 cut(s) 426, 512, 1163, 1326, 1536, 1590
BseNI ACTGG 8 cut(s) 501, 966, 984, 1063, 1071, 1126, 1328, 1457
BseRI GAGGAG 4 cut(s) 705, 1208, 1232, 1305
BseSI GKGCMC 1 cut(s) 1034
BseXI GCAGC 5 cut(s) 415, 1012, 1255, 1570, 1789
Bsh1236I CGCG 1 cut(s) 53
Bsh1285I CGRYCG 1 cut(s) 97
BshFI GGCC 5 cut(s) 314, 476, 1032, 1392, 1604
BshVI ATCGAT 1 cut(s) 657
BsiEI CGRYCG 1 cut(s) 97
BsiHKAI GWGCWC 1 cut(s) 715
BsiSI CCGG 3 cut(s) 122, 158, 1781
BslFI GGGAC 1 cut(s) 232
BslI CCNNNNNNNGG 3 cut(s) 30, 215, 933
BsmAI GTCTC 3 cut(s) 196, 530, 1718
BsmFI GGGAC 1 cut(s) 232
BsmI GAATGC 4 cut(s) 849, 1309, 1413, 1652
BsnI GGCC 5 cut(s) 314, 476, 1032, 1392, 1604
Bso31I GGTCTC 1 cut(s) 196
Bsp119I TTCGAA 1 cut(s) 1207
Bsp120I GGGCCC 1 cut(s) 1030
Bsp1286I GDGCHC 3 cut(s) 715, 1034, 1913
Bsp1407I TGTACA 1 cut(s) 357
Bsp143I GATC 7 cut(s) 94, 132, 654, 871, 1087, 1174, 1179
Bsp1720I GCTNAGC 2 cut(s) 424, 1335
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 9 cut(s) 48, 51, 53, 62, 431, 449, 649, 1028, 1834
BspANI GGCC 5 cut(s) 314, 476, 1032, 1392, 1604
BspCNI CTCAG 6 cut(s) 425, 513, 1162, 1327, 1537, 1591
BspDI ATCGAT 1 cut(s) 657
BspFNI CGCG 1 cut(s) 53
BspLI GGNNCC 1 cut(s) 1032
BspMAI CTGCAG 1 cut(s) 535
BspPI GGATC 1 cut(s) 127
BspT104I TTCGAA 1 cut(s) 1207
BspTI CTTAAG 1 cut(s) 770
BspTNI GGTCTC 1 cut(s) 196
BsrGI TGTACA 1 cut(s) 357
BsrI ACTGG 8 cut(s) 501, 966, 984, 1063, 1071, 1126, 1328, 1457
BssECI CCNNGG 8 cut(s) 51, 122, 144, 158, 327, 681, 1347, 1912
BssMI GATC 7 cut(s) 94, 132, 654, 871, 1087, 1174, 1179
BssNAI GTATAC 1 cut(s) 1137
BssNI GRCGYC 1 cut(s) 116
BssT1I CCWWGG 1 cut(s) 327
Bst1107I GTATAC 1 cut(s) 1137
Bst2UI CCWGG 3 cut(s) 928, 1278, 1914
Bst4CI ACNGT 6 cut(s) 786, 1100, 1729, 1869, 2010, 2038
BstACI GRCGYC 1 cut(s) 116
BstAFI CTTAAG 1 cut(s) 770
BstAUI TGTACA 1 cut(s) 357
BstBI TTCGAA 1 cut(s) 1207
BstC8I GCNNGC 4 cut(s) 141, 1030, 1257, 1420
BstDSI CCRYGG 3 cut(s) 51, 327, 681
BstEII GGTNACC 1 cut(s) 1100
BstFNI CGCG 1 cut(s) 53
BstKTI GATC 7 cut(s) 97, 135, 657, 874, 1090, 1177, 1182
BstMAI GTCTC 3 cut(s) 196, 530, 1718
BstMBI GATC 7 cut(s) 94, 132, 654, 871, 1087, 1174, 1179
BstMCI CGRYCG 1 cut(s) 97
BstMWI GCNNNNNNNGC 9 cut(s) 35, 59, 232, 253, 395, 1265, 1555, 1917, 1978
BstNI CCWGG 3 cut(s) 928, 1278, 1914
BstNSI RCATGY 1 cut(s) 1255
BstPAI GACNNNNGTC 1 cut(s) 823
BstPI GGTNACC 1 cut(s) 1100
BstSCI CCNGG 5 cut(s) 121, 157, 926, 1276, 1912
BstSFI CTRYAG 2 cut(s) 531, 1014
BstSLI GKGCMC 1 cut(s) 1034
BstUI CGCG 1 cut(s) 53
BstV1I GCAGC 5 cut(s) 415, 1012, 1255, 1570, 1789
BstV2I GAAGAC 2 cut(s) 823, 2028
BstX2I RGATCY 2 cut(s) 871, 1174
BstYI RGATCY 2 cut(s) 871, 1174
BstZ17I GTATAC 1 cut(s) 1137
Bsu15I ATCGAT 1 cut(s) 657
BsuI GTATCC 3 cut(s) 31, 1438, 1675
BsuRI GGCC 5 cut(s) 314, 476, 1032, 1392, 1604
BsuTUI ATCGAT 1 cut(s) 657
BtgI CCRYGG 3 cut(s) 51, 327, 681
BtrI CACGTC 1 cut(s) 941
BtsI GCAGTG 1 cut(s) 540
BtsIMutI CAGTG 5 cut(s) 540, 782, 951, 959, 1056
Cac8I GCNNGC 4 cut(s) 141, 1030, 1257, 1420
CaiI CAGNNNCTG 1 cut(s) 1334
Cfr13I GGNCC 4 cut(s) 1030, 1031, 1157, 1891
Cfr42I CCGCGG 1 cut(s) 54
ClaI ATCGAT 1 cut(s) 657
Csp6I GTAC 5 cut(s) 358, 842, 892, 1344, 1478
CspCI CAANNNNNGTGG 4 cut(s) 466, 501, 1834, 1869
CviAII CATG 6 cut(s) 179, 328, 370, 707, 1252, 1792
CviQI GTAC 5 cut(s) 358, 842, 892, 1344, 1478
DpnI GATC 7 cut(s) 96, 134, 656, 873, 1089, 1176, 1181
DpnII GATC 7 cut(s) 94, 132, 654, 871, 1087, 1174, 1179
DriI GACNNNNNGTC 1 cut(s) 1948
EaeI YGGCCR 1 cut(s) 474
Eam1105I GACNNNNNGTC 1 cut(s) 1948
EciI GGCGGA 3 cut(s) 37, 438, 664
Eco130I CCWWGG 1 cut(s) 327
Eco24I GRGCYC 2 cut(s) 1034, 1913
Eco31I GGTCTC 1 cut(s) 196
Eco47I GGWCC 2 cut(s) 1157, 1891
Eco57I CTGAAG 6 cut(s) 318, 745, 765, 849, 1017, 1191
Eco91I GGTNACC 1 cut(s) 1100
EcoO109I RGGNCCY 2 cut(s) 1031, 1157
EcoO65I GGTNACC 1 cut(s) 1100
EcoRI GAATTC 1 cut(s) 877
EcoRII CCWGG 3 cut(s) 926, 1276, 1912
EcoT14I CCWWGG 1 cut(s) 327
EcoT38I GRGCYC 2 cut(s) 1034, 1913
ErhI CCWWGG 1 cut(s) 327
FaeI CATG 6 cut(s) 182, 331, 373, 710, 1255, 1795
FaqI GGGAC 1 cut(s) 232
FatI CATG 6 cut(s) 178, 327, 369, 706, 1251, 1791
FauI CCCGC 1 cut(s) 1021
FauNDI CATATG 1 cut(s) 838
FbaI TGATCA 1 cut(s) 1179
FblI GTMKAC 1 cut(s) 1136
Fnu4HI GCNGC 8 cut(s) 51, 54, 429, 1026, 1269, 1559, 1778, 1835
FriOI GRGCYC 2 cut(s) 1034, 1913
Fsp4HI GCNGC 8 cut(s) 51, 54, 429, 1026, 1269, 1559, 1778, 1835
FspBI CTAG 2 cut(s) 846, 1809
GluI GCNGC 8 cut(s) 51, 54, 429, 1026, 1269, 1559, 1778, 1835
GsuI CTGGAG 1 cut(s) 983
HaeIII GGCC 5 cut(s) 314, 476, 1032, 1392, 1604
HapII CCGG 3 cut(s) 122, 158, 1781
Hin1I GRCGYC 1 cut(s) 116
Hin1II CATG 6 cut(s) 182, 331, 373, 710, 1255, 1795
HincII GTYRAC 1 cut(s) 1702
HindII GTYRAC 1 cut(s) 1702
HindIII AAGCTT 1 cut(s) 421
HpaII CCGG 3 cut(s) 122, 158, 1781
HphI GGTGA 3 cut(s) 490, 1136, 1530
Hpy166II GTNNAC 6 cut(s) 1127, 1137, 1614, 1689, 1702, 1814
Hpy8I GTNNAC 6 cut(s) 1127, 1137, 1614, 1689, 1702, 1814
Hpy99I CGWCG 2 cut(s) 121, 942
HpyAV CCTTC 9 cut(s) 25, 49, 304, 1148, 1502, 1551, 1690, 1809, 1815
HpyCH4III ACNGT 6 cut(s) 786, 1100, 1729, 1869, 2010, 2038
HpyCH4IV ACGT 2 cut(s) 116, 940
HpyCH4V TGCA 8 cut(s) 533, 629, 904, 1255, 1271, 1411, 1650, 1991
HpyF10VI GCNNNNNNNGC 9 cut(s) 35, 59, 232, 253, 395, 1265, 1555, 1917, 1978
HpySE526I ACGT 2 cut(s) 116, 940
Hsp92I GRCGYC 1 cut(s) 116
Hsp92II CATG 6 cut(s) 182, 331, 373, 710, 1255, 1795
Ksp22I TGATCA 1 cut(s) 1179
KspI CCGCGG 1 cut(s) 54
Kzo9I GATC 7 cut(s) 94, 132, 654, 871, 1087, 1174, 1179
LmnI GCTCC 4 cut(s) 64, 293, 718, 756
Lsp1109I GCAGC 5 cut(s) 415, 1012, 1255, 1570, 1789
LweI GCATC 3 cut(s) 616, 695, 2000
MaeI CTAG 2 cut(s) 846, 1809
MaeII ACGT 2 cut(s) 116, 940
MaeIII GTNAC 2 cut(s) 1100, 1144
MalI GATC 7 cut(s) 96, 134, 656, 873, 1089, 1176, 1181
MboI GATC 7 cut(s) 94, 132, 654, 871, 1087, 1174, 1179
MfeI CAATTG 2 cut(s) 470, 913
MflI RGATCY 2 cut(s) 871, 1174
MhlI GDGCHC 3 cut(s) 715, 1034, 1913
MlsI TGGCCA 1 cut(s) 476
MluNI TGGCCA 1 cut(s) 476
MlyI GAGTC 3 cut(s) 14, 173, 532
MmeI TCCRAC 1 cut(s) 1095
Mox20I TGGCCA 1 cut(s) 476
MroXI GAANNNNTTC 3 cut(s) 405, 1068, 1512
MscI TGGCCA 1 cut(s) 476
MseI TTAA 4 cut(s) 404, 735, 771, 1397
MslI CAYNNNNRTG 1 cut(s) 854
Msp20I TGGCCA 1 cut(s) 476
MspA1I CMGCKG 3 cut(s) 53, 482, 1561
MspCI CTTAAG 1 cut(s) 770
MspI CCGG 3 cut(s) 122, 158, 1781
MspR9I CCNGG 5 cut(s) 123, 159, 928, 1278, 1914
MunI CAATTG 2 cut(s) 470, 913
Mva1269I GAATGC 4 cut(s) 849, 1309, 1413, 1652
MvaI CCWGG 3 cut(s) 928, 1278, 1914
MvnI CGCG 1 cut(s) 53
MwoI GCNNNNNNNGC 9 cut(s) 35, 59, 232, 253, 395, 1265, 1555, 1917, 1978
NciI CCSGG 2 cut(s) 123, 159
NcoI CCATGG 1 cut(s) 327
NdeI CATATG 1 cut(s) 838
NdeII GATC 7 cut(s) 94, 132, 654, 871, 1087, 1174, 1179
NlaIII CATG 6 cut(s) 182, 331, 373, 710, 1255, 1795
NlaIV GGNNCC 1 cut(s) 1032
NmeAIII GCCGAG 2 cut(s) 169, 340
NspI RCATGY 1 cut(s) 1255
NspV TTCGAA 1 cut(s) 1207
PctI GAATGC 4 cut(s) 849, 1309, 1413, 1652
PdmI GAANNNNTTC 3 cut(s) 405, 1068, 1512
PfeI GAWTC 9 cut(s) 104, 152, 182, 445, 610, 659, 865, 1001, 1355
PfoI TCCNGGA 1 cut(s) 926
PkrI GCNGC 8 cut(s) 52, 55, 430, 1027, 1270, 1560, 1779, 1836
Ple19I CGATCG 1 cut(s) 97
PleI GAGTC 3 cut(s) 13, 172, 531
PpsI GAGTC 3 cut(s) 13, 172, 531
PpuMI RGGWCCY 1 cut(s) 1157
PshAI GACNNNNGTC 1 cut(s) 823
PshBI ATTAAT 1 cut(s) 404
Psp5II RGGWCCY 1 cut(s) 1157
Psp6I CCWGG 3 cut(s) 926, 1276, 1912
PspEI GGTNACC 1 cut(s) 1100
PspGI CCWGG 3 cut(s) 926, 1276, 1912
PspN4I GGNNCC 1 cut(s) 1032
PspOMI GGGCCC 1 cut(s) 1030
PspPI GGNCC 4 cut(s) 1030, 1031, 1157, 1891
PspPPI RGGWCCY 1 cut(s) 1157
PstI CTGCAG 1 cut(s) 535
PstNI CAGNNNCTG 1 cut(s) 1334
PsuI RGATCY 2 cut(s) 871, 1174
PvuI CGATCG 1 cut(s) 97
PvuII CAGCTG 2 cut(s) 482, 1561
RsaI GTAC 5 cut(s) 359, 843, 893, 1345, 1479
RsaNI GTAC 5 cut(s) 358, 842, 892, 1344, 1478
RseI CAYNNNNRTG 1 cut(s) 854
SacII CCGCGG 1 cut(s) 54
SaqAI TTAA 4 cut(s) 404, 735, 771, 1397
SatI GCNGC 8 cut(s) 51, 54, 429, 1026, 1269, 1559, 1778, 1835
Sau3AI GATC 7 cut(s) 94, 132, 654, 871, 1087, 1174, 1179
Sau96I GGNCC 4 cut(s) 1030, 1031, 1157, 1891
SchI GAGTC 3 cut(s) 14, 173, 532
ScrFI CCNGG 5 cut(s) 123, 159, 928, 1278, 1914
SduI GDGCHC 3 cut(s) 715, 1034, 1913
SfaNI GCATC 3 cut(s) 616, 695, 2000
SfcI CTRYAG 2 cut(s) 531, 1014
Sfr303I CCGCGG 1 cut(s) 54
SfuI TTCGAA 1 cut(s) 1207
SgrBI CCGCGG 1 cut(s) 54
SinI GGWCC 2 cut(s) 1157, 1891
SmiMI CAYNNNNRTG 1 cut(s) 854
SmlI CTYRAG 1 cut(s) 770
SmoI CTYRAG 1 cut(s) 770
SsiI CCGC 9 cut(s) 48, 51, 53, 62, 431, 449, 649, 1028, 1834
SspI AATATT 1 cut(s) 274
SspMI CTAG 2 cut(s) 846, 1809
StyD4I CCNGG 5 cut(s) 121, 157, 926, 1276, 1912
StyI CCWWGG 1 cut(s) 327
TaaI ACNGT 6 cut(s) 786, 1100, 1729, 1869, 2010, 2038
TaiI ACGT 2 cut(s) 119, 943
TaqI TCGA 5 cut(s) 167, 657, 1048, 1207, 1722
TatI WGTACW 1 cut(s) 357
TauI GCSGC 3 cut(s) 53, 56, 1837
TfiI GAWTC 9 cut(s) 104, 152, 182, 445, 610, 659, 865, 1001, 1355
Tru1I TTAA 4 cut(s) 404, 735, 771, 1397
Tru9I TTAA 4 cut(s) 404, 735, 771, 1397
TscAI CASTG 5 cut(s) 540, 789, 958, 966, 1063
TseI GCWGC 5 cut(s) 428, 1025, 1268, 1558, 1777
TspDTI ATGAA 9 cut(s) 165, 195, 312, 363, 386, 579, 695, 1659, 1787
TspGWI ACGGA 2 cut(s) 997, 2033
TspRI CASTG 5 cut(s) 540, 789, 958, 966, 1063
Vha464I CTTAAG 1 cut(s) 770
VpaK11BI GGWCC 2 cut(s) 1157, 1891
VspI ATTAAT 1 cut(s) 404
XapI RAATTY 4 cut(s) 352, 491, 637, 877
XceI RCATGY 1 cut(s) 1255
XcmI CCANNNNNNNNNTGG 1 cut(s) 958
XmiI GTMKAC 1 cut(s) 1136
XmnI GAANNNNTTC 3 cut(s) 405, 1068, 1512
XspI CTAG 2 cut(s) 846, 1809
ZraI GACGTC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.