Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0004994

Physical Location & Seq

Genomic Coordinates Forward (+)

13579870 .. 13586235

Gene Structure 6366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G216600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGCCATGTCCCCAGCCTAAGTGCTCCCCATCAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTACAACTGCAAACATGGACTCCATTTTGGGCTATGGCGCAGTCATCTCACTGAGAGCTTAACGTGCGCACTCCCGGCGCAGGATATGGAGTCGCCCTCCTTTGTATCCAAAGCGAGGACCGCCTTCCATTCTGCGGCGGCTAAAGCGGAGCGAGTTTTCTCTGACTTGAAGCCCGCTCGAGATTCTGATAAGCAATCGCCCAAGAATTTGATTAATCAAGCAGATGATGAACCGCCAAGTAACGAGGGCGAGTCAAAGGGTTCCAATGAATTAAAGCATTTGAGGTGGAGACCTCCAAACATAGGGACAAAGCAAGAATGGCAGGATAGACTTAGGAACATTGGAAAAGGAAAAAAAGAAGTTGAAGACGAGAAGGCCGAATATTCAACCATGGCGGTTCCGTTCTATGATGAGAATTTGTACCTGCTGAACATGAAAAATGATATTGAAGCAAAGGGGGCAGAGATGATTCCCTCAGTTGAAAGCTTTGTTGCAGACAACATTGTGATTCCTCCATTGTCTGTTATGAGGCAATTGGCTACAGCTGTTGAGGCTGGAAAGAAGTTAAAATCATTGAAAGATTTTTTGGCAACATCAGGAAGTTCCTCACCTGTCAGGGAGAGAGCAAGCCTGAGTCTCTATGCAGTGAGGTCCTTAGTGCTTCGTGAAAAGGATGAAAGGCCATCGGATTTTGGTAATAATGAGAAGGTTCTATCATTGATCCGCTCGCTGTTTGATGCAGAGGGAAATTTTCTAAGACGGAAGATCGATTCTGGTTCCGAGGCAATTACAGCGGCATCTTTGCCAAGAGATATTCACGGTGCTCCTCCTGAAAGCCTGGTTGTTAAGCTAGCTGAAGTTGTTGGGAGCTTCAGAACCCTCAAGAAAATGACACTGTTTTGGTGCAGAGTTGTTGAAGAGCTGAGAAGACTTTGGTCTGAAGAAGAACATGTACCTAGCATCCCCATAGATGAGATTCCAGATCTGAATTCCTGTCTTTTGTATCAGCGGTTGCAAGTTATCAACTGTTGTATTTCCAGGAAAAGGCGGCGTGCTATTGCCACTGAAACATTAGACTTTGTAATAACGGAAGCCAGTCCAAAGGCAGAAGAATCTGCCATCTCCAATGACAATCCTGCAGGCCCTATGTTGTATGCTAGACTAAGCACTGGGGAACTTGTCCTCCGACTAGGTGCTGATCGACCATTTGGTAATGTGACAATGTTGGAAACTGGGGAACCTGTGTACTGCCCTGTGACCCAGGAAGGACCTTTGCTAACTGAAGATCTTATCAAAGAAACAGAAGAGTTTGTGCTTCGAACAGGAAGCGTTGGTGCTGGATGTTCTCAACTCCTATCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGATTTTGTGAGATGGCACTCCCCTCCTGACTGGTCGGAGACTGAACCAGAGGATAGAGACTCTTTTGATGGTAGTGATGCATTGTCCACAAGAGGATATCTAAGCAGTCGAATGCAAAAAGAAGGCAATTTGTGGCGTGAGTTTTGGGACACATCCAAGCCAGTTCCAGCAGTTAAACAAGTACCCCTCTTTGATGAGGATTTAGCAGTAGAAGGTATCCTGGATGGTTTTGATGACATATCACCTTCCGAGCTTTTTGAGCAGCTGTTTGTTTCTTTGCTTGGTTTAGGCTTTGTAATTGCTGAGGCTAAACTGTCCAGTAGTAGTGATTTTTCGAAGCTGTTCTATGAATGCAAGGAATATGTGGTTTCCACTTGTCAAAGCAGCACCCGGACTGAGAAGGTTGATGAGCTTTGCCAGGTATATGAAACAGTGGAGACTATGTTACAGAATCCAGAGGAAGTCCTAAAAATGATGAAGCAACCGGAAGAATCAACGACCCCTTCCGGTGAACCAAAACGGCGTTTTAAGAGGCTCATCCTCAACTTCGGTGGCAAAGATAGACAGTTAAAAAAATCAGCTTCAAAGGATCAGAAGAACTCAACGAGCCCTAGTAGCCAACCATTTTCAAGTTTCTTTGACAACAAGTCATCACTATTTTCAAAAAAGCCTCCGAAGCCTGAAAATACATCCCCTGCTGAAAAACCTTCGATTACAGACGAAAATGATTGGACGGTTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BSD Rab3-GTPase_cat

Protein Analysis

737

Amino Acids

82.2

Weight (kDa)

5.24

Isoelectric Point (pI)

57.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004994)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55060 AT5G55060 AT5G55060
fragaria_vesca	FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020
malus_domestica	MD03G1198400.v1.1 MD11G1214500.v1.1
prunus_persica	Prupe.4G216600_v2.0.a1 Prupe.4G216600_v2.0.a1
pyrus_communis	pycom03g15000 pycom11g18890
rosa_chinensis	RchiOBHm_Chr5g0040501
rosa_laevigata	RLG00000033984
rosa_multiflora	Rmu_sc0010369.1_g000012
rosa_roxburghii	Rroxscaffold_1G00040150 Rroxscaffold_1G00040880
rosa_rugosa	Rorug05G0185300
rosa_samantha	Rh5BG276200 Rh5CG309100 Rh5DG284700
rosa_wichuraiana	Rw5G015460 Rw5G025490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	130
Acc36I	ACCTGC	1 cut(s)	495
AccBSI	CCGCTC	2 cut(s)	239, 789
AclWI	GGATC	2 cut(s)	778, 2064
AcsI	RAATTY	4 cut(s)	268, 478, 811, 1051
AcuI	CTGAAG	4 cut(s)	919, 939, 1023, 1365
AfaI	GTAC	4 cut(s)	485, 1017, 1310, 1650
AfiI	CCNNNNNNNGG	5 cut(s)	142, 177, 196, 365, 1107
AflIII	ACRYGT	1 cut(s)	1012
AhdI	GACNNNNNGTC	1 cut(s)	2113
AjnI	CCWGG	6 cut(s)	900, 1100, 1323, 1450, 1686, 1884
AjuI	GAANNNNNNNTTGG	2 cut(s)	632, 664
AloI	GAACNNNNNNTCC	2 cut(s)	1230, 1262
Alw21I	GWGCWC	2 cut(s)	26, 889
Alw26I	GTCTC	5 cut(s)	346, 704, 1499, 1518, 1898
AlwI	GGATC	2 cut(s)	778, 2064
Ama87I	CYCGRG	1 cut(s)	240
AoxI	GGCC	3 cut(s)	438, 743, 1204
ApeKI	GCWGC	3 cut(s)	1442, 1729, 1851
ApoI	RAATTY	4 cut(s)	268, 478, 811, 1051
AseI	ATTAAT	1 cut(s)	276
Asp700I	GAANNNNTTC	1 cut(s)	1808
AspLEI	GCGC	3 cut(s)	102, 131, 142
AspS9I	GGNCC	4 cut(s)	180, 714, 1205, 1331
AsuC2I	CCSGG	2 cut(s)	137, 1858
AsuHPI	GGTGA	3 cut(s)	663, 1701, 1988
AsuII	TTCGAA	2 cut(s)	1381, 1802
AsuNHI	GCTAGC	1 cut(s)	913
AvaI	CYCGRG	1 cut(s)	240
AvaII	GGWCC	3 cut(s)	180, 714, 1331
BanII	GRGCYC	1 cut(s)	2078
BarI	GAAGNNNNNNTAC	2 cut(s)	999, 1031
BbsI	GAAGAC	2 cut(s)	435, 997
Bbv12I	GWGCWC	2 cut(s)	26, 889
BbvCI	CCTCAGC	1 cut(s)	1770
BbvI	GCAGC	3 cut(s)	1429, 1741, 1863
BccI	CCATC	6 cut(s)	37, 754, 1190, 1473, 1529, 1685
BceAI	ACGGC	1 cut(s)	2003
BciT130I	CCWGG	6 cut(s)	902, 1102, 1325, 1452, 1688, 1886
BciVI	GTATCC	2 cut(s)	178, 1694
BcnI	CCSGG	2 cut(s)	137, 1858
BcoDI	GTCTC	5 cut(s)	346, 704, 1499, 1518, 1898
BfaI	CTAG	5 cut(s)	914, 1020, 1221, 1253, 2079
BfmI	CTRYAG	2 cut(s)	603, 1200
BfuAI	ACCTGC	1 cut(s)	495
BfuI	GTATCC	2 cut(s)	178, 1694
BglII	AGATCT	2 cut(s)	1045, 1348
BisI	GCNGC	7 cut(s)	198, 201, 858, 1112, 1443, 1730, 1852
BlsI	GCNGC	7 cut(s)	199, 202, 859, 1113, 1444, 1731, 1853
Bme1390I	CCNGG	8 cut(s)	137, 902, 1102, 1325, 1452, 1688, 1858, 1886
Bme18I	GGWCC	3 cut(s)	180, 714, 1331
BmeRI	GACNNNNNGTC	1 cut(s)	2113
BmeT110I	CYCGRG	1 cut(s)	240
BmgT120I	GGNCC	4 cut(s)	180, 714, 1205, 1331
BmiI	GGNNCC	4 cut(s)	325, 462, 841, 1302
BmrFI	CCNGG	8 cut(s)	137, 902, 1102, 1325, 1452, 1688, 1858, 1886
BmrI	ACTGGG	2 cut(s)	1242, 1305
BmsI	GCATC	4 cut(s)	790, 869, 1032, 1534
BmtI	GCTAGC	1 cut(s)	917
BmuI	ACTGGG	2 cut(s)	1242, 1305
BoxI	GACNNNNGTC	1 cut(s)	997
BpiI	GAAGAC	2 cut(s)	435, 997
BplI	GAGNNNNNCTC	2 cut(s)	143, 175
Bpu10I	CCTNAGC	1 cut(s)	1770
Bpu14I	TTCGAA	2 cut(s)	1381, 1802
BpuEI	CTTGAG	1 cut(s)	929
BpuMI	CCSGG	2 cut(s)	137, 1858
Bsa29I	ATCGAT	1 cut(s)	831
BsaI	GGTCTC	1 cut(s)	346
BsaJI	CCNNGG	3 cut(s)	453, 843, 1323
BsaWI	WCCGGW	2 cut(s)	1951, 1973
BsaXI	ACNNNNNCTCC	6 cut(s)	66, 96, 1230, 1260, 1895, 1925
Bsc4I	CCNNNNNNNGG	5 cut(s)	142, 177, 196, 365, 1107
Bse1I	ACTGG	6 cut(s)	1158, 1237, 1300, 1502, 1628, 1785
BseBI	CCWGG	6 cut(s)	902, 1102, 1325, 1452, 1688, 1886
BseCI	ATCGAT	1 cut(s)	831
BseDI	CCNNGG	3 cut(s)	453, 843, 1323
BseGI	GGATG	7 cut(s)	742, 1023, 1409, 1619, 1696, 2004, 2156
BseLI	CCNNNNNNNGG	5 cut(s)	142, 177, 196, 365, 1107
BseMII	CTCAG	6 cut(s)	105, 552, 686, 977, 1761, 1854
BseNI	ACTGG	6 cut(s)	1158, 1237, 1300, 1502, 1628, 1785
BseRI	GAGGAG	1 cut(s)	879
BseXI	GCAGC	3 cut(s)	1429, 1741, 1863
BseYI	CCCAGC	1 cut(s)	12
BsgI	GTGCAG	1 cut(s)	988
BshFI	GGCC	3 cut(s)	440, 745, 1206
BshVI	ATCGAT	1 cut(s)	831
BsiHKAI	GWGCWC	2 cut(s)	26, 889
BsiHKCI	CYCGRG	1 cut(s)	240
BsiSI	CCGG	4 cut(s)	137, 1858, 1952, 1974
BslFI	GGGAC	2 cut(s)	382, 1628
BslI	CCNNNNNNNGG	5 cut(s)	142, 177, 196, 365, 1107
BsmAI	GTCTC	5 cut(s)	346, 704, 1499, 1518, 1898
BsmFI	GGGAC	2 cut(s)	382, 1628
BsmI	GAATGC	2 cut(s)	1584, 1823
BsnI	GGCC	3 cut(s)	440, 745, 1206
Bso31I	GGTCTC	1 cut(s)	346
BsoBI	CYCGRG	1 cut(s)	240
Bsp119I	TTCGAA	2 cut(s)	1381, 1802
Bsp1286I	GDGCHC	3 cut(s)	26, 889, 2078
Bsp143I	GATC	6 cut(s)	783, 828, 1045, 1261, 1348, 2056
Bsp19I	CCATGG	1 cut(s)	453
BspANI	GGCC	3 cut(s)	440, 745, 1206
BspCNI	CTCAG	6 cut(s)	106, 551, 687, 978, 1762, 1855
BspDI	ATCGAT	1 cut(s)	831
BspLI	GGNNCC	4 cut(s)	325, 462, 841, 1302
BspMAI	CTGCAG	1 cut(s)	1204
BspMI	ACCTGC	1 cut(s)	495
BspOI	GCTAGC	1 cut(s)	917
BspPI	GGATC	2 cut(s)	778, 2064
BspQI	GCTCTTC	1 cut(s)	975
BspT104I	TTCGAA	2 cut(s)	1381, 1802
BspTNI	GGTCTC	1 cut(s)	346
BsrBI	CCGCTC	2 cut(s)	239, 789
BsrI	ACTGG	6 cut(s)	1158, 1237, 1300, 1502, 1628, 1785
BssECI	CCNNGG	3 cut(s)	453, 843, 1323
BssMI	GATC	6 cut(s)	783, 828, 1045, 1261, 1348, 2056
BssT1I	CCWWGG	1 cut(s)	453
Bst2UI	CCWGG	6 cut(s)	902, 1102, 1325, 1452, 1688, 1886
Bst4CI	ACNGT	7 cut(s)	884, 960, 1091, 1782, 1900, 2034, 2203
Bst6I	CTCTTC	2 cut(s)	975, 1362
BstBI	TTCGAA	2 cut(s)	1381, 1802
BstC8I	GCNNGC	7 cut(s)	237, 691, 791, 915, 1116, 1204, 1431
BstDSI	CCRYGG	1 cut(s)	453
BstF5I	GGATG	7 cut(s)	742, 1023, 1409, 1619, 1696, 2004, 2156
BstHHI	GCGC	3 cut(s)	102, 131, 142
BstKTI	GATC	6 cut(s)	786, 831, 1048, 1264, 1351, 2059
BstMAI	GTCTC	5 cut(s)	346, 704, 1499, 1518, 1898
BstMBI	GATC	6 cut(s)	783, 828, 1045, 1261, 1348, 2056
BstNI	CCWGG	6 cut(s)	902, 1102, 1325, 1452, 1688, 1886
BstNSI	RCATGY	2 cut(s)	1016, 1429
BstPAI	GACNNNNGTC	1 cut(s)	997
BstSCI	CCNGG	8 cut(s)	135, 900, 1100, 1323, 1450, 1686, 1856, 1884
BstSFI	CTRYAG	2 cut(s)	603, 1200
BstV1I	GCAGC	3 cut(s)	1429, 1741, 1863
BstV2I	GAAGAC	2 cut(s)	435, 997
BstX2I	RGATCY	2 cut(s)	1045, 1348
BstYI	RGATCY	2 cut(s)	1045, 1348
Bsu15I	ATCGAT	1 cut(s)	831
BsuI	GTATCC	2 cut(s)	178, 1694
BsuRI	GGCC	3 cut(s)	440, 745, 1206
BsuTUI	ATCGAT	1 cut(s)	831
BtgI	CCRYGG	1 cut(s)	453
BtsCI	GGATG	7 cut(s)	742, 1023, 1409, 1619, 1696, 2004, 2156
BtsI	GCAGTG	1 cut(s)	714
BtsIMutI	CAGTG	6 cut(s)	111, 714, 956, 1125, 1230, 1905
BveI	ACCTGC	1 cut(s)	495
Cac8I	GCNNGC	7 cut(s)	237, 691, 791, 915, 1116, 1204, 1431
CfoI	GCGC	3 cut(s)	102, 131, 142
Cfr13I	GGNCC	4 cut(s)	180, 714, 1205, 1331
ClaI	ATCGAT	1 cut(s)	831
Csp6I	GTAC	4 cut(s)	484, 1016, 1309, 1649
CspCI	CAANNNNNGTGG	2 cut(s)	1999, 2034
CviAII	CATG	6 cut(s)	6, 77, 454, 496, 1013, 1426
CviQI	GTAC	4 cut(s)	484, 1016, 1309, 1649
DpnI	GATC	6 cut(s)	785, 830, 1047, 1263, 1350, 2058
DpnII	GATC	6 cut(s)	783, 828, 1045, 1261, 1348, 2056
DriI	GACNNNNNGTC	1 cut(s)	2113
Eam1104I	CTCTTC	2 cut(s)	975, 1362
Eam1105I	GACNNNNNGTC	1 cut(s)	2113
EarI	CTCTTC	2 cut(s)	975, 1362
Eco130I	CCWWGG	1 cut(s)	453
Eco24I	GRGCYC	1 cut(s)	2078
Eco31I	GGTCTC	1 cut(s)	346
Eco32I	GATATC	1 cut(s)	1565
Eco47I	GGWCC	3 cut(s)	180, 714, 1331
Eco57I	CTGAAG	4 cut(s)	919, 939, 1023, 1365
Eco88I	CYCGRG	1 cut(s)	240
EcoO109I	RGGNCCY	3 cut(s)	714, 1205, 1331
EcoRI	GAATTC	1 cut(s)	1051
EcoRII	CCWGG	6 cut(s)	900, 1100, 1323, 1450, 1686, 1884
EcoRV	GATATC	1 cut(s)	1565
EcoT14I	CCWWGG	1 cut(s)	453
EcoT22I	ATGCAT	1 cut(s)	1549
EcoT38I	GRGCYC	1 cut(s)	2078
ErhI	CCWWGG	1 cut(s)	453
FaeI	CATG	6 cut(s)	9, 80, 457, 499, 1016, 1429
FaqI	GGGAC	2 cut(s)	382, 1628
FatI	CATG	6 cut(s)	5, 76, 453, 495, 1012, 1425
FauI	CCCGC	1 cut(s)	244
Fnu4HI	GCNGC	7 cut(s)	198, 201, 858, 1112, 1443, 1730, 1852
FokI	GGATG	7 cut(s)	749, 1010, 1416, 1606, 1703, 1991, 2143
FriOI	GRGCYC	1 cut(s)	2078
Fsp4HI	GCNGC	7 cut(s)	198, 201, 858, 1112, 1443, 1730, 1852
FspAI	RTGCGCAY	1 cut(s)	130
FspBI	CTAG	5 cut(s)	914, 1020, 1221, 1253, 2079
FspI	TGCGCA	1 cut(s)	130
GlaI	GCGC	3 cut(s)	101, 130, 141
GluI	GCNGC	7 cut(s)	198, 201, 858, 1112, 1443, 1730, 1852
GsaI	CCCAGC	1 cut(s)	16
HaeIII	GGCC	3 cut(s)	440, 745, 1206
HapII	CCGG	4 cut(s)	137, 1858, 1952, 1974
HhaI	GCGC	3 cut(s)	102, 131, 142
Hin1II	CATG	6 cut(s)	9, 80, 457, 499, 1016, 1429
Hin6I	GCGC	3 cut(s)	100, 129, 140
HinP1I	GCGC	3 cut(s)	100, 129, 140
HindIII	AAGCTT	1 cut(s)	547
HpaII	CCGG	4 cut(s)	137, 1858, 1952, 1974
HphI	GGTGA	3 cut(s)	663, 1701, 1988
Hpy166II	GTNNAC	3 cut(s)	1309, 1554, 1979
Hpy188III	TCNNGA	8 cut(s)	242, 660, 728, 893, 946, 1043, 1493, 1922
Hpy8I	GTNNAC	3 cut(s)	1309, 1554, 1979
HpyCH4III	ACNGT	7 cut(s)	884, 960, 1091, 1782, 1900, 2034, 2203
HpyCH4IV	ACGT	1 cut(s)	125
HpySE526I	ACGT	1 cut(s)	125
Hsp92II	CATG	6 cut(s)	9, 80, 457, 499, 1016, 1429
HspAI	GCGC	3 cut(s)	100, 129, 140
Kzo9I	GATC	6 cut(s)	783, 828, 1045, 1261, 1348, 2056
LguI	GCTCTTC	1 cut(s)	975
LmnI	GCTCC	4 cut(s)	29, 211, 892, 930
Lsp1109I	GCAGC	3 cut(s)	1429, 1741, 1863
LweI	GCATC	4 cut(s)	790, 869, 1032, 1534
MaeI	CTAG	5 cut(s)	914, 1020, 1221, 1253, 2079
MaeII	ACGT	1 cut(s)	125
MaeIII	GTNAC	4 cut(s)	302, 1279, 1318, 1911
MalI	GATC	6 cut(s)	785, 830, 1047, 1263, 1350, 2058
MbiI	CCGCTC	2 cut(s)	239, 789
MboI	GATC	6 cut(s)	783, 828, 1045, 1261, 1348, 2056
MfeI	CAATTG	1 cut(s)	596
MflI	RGATCY	2 cut(s)	1045, 1348
MhlI	GDGCHC	3 cut(s)	26, 889, 2078
MluCI	AATT	9 cut(s)	268, 332, 478, 596, 811, 849, 1051, 1594, 1764
MlyI	GAGTC	5 cut(s)	75, 161, 323, 706, 1520
MmeI	TCCRAC	3 cut(s)	1269, 1273, 1482
Mph1103I	ATGCAT	1 cut(s)	1549
MroXI	GAANNNNTTC	1 cut(s)	1808
MseI	TTAA	8 cut(s)	122, 276, 335, 629, 909, 1641, 1995, 2036
MspA1I	CMGCKG	4 cut(s)	608, 857, 1072, 1732
MspI	CCGG	4 cut(s)	137, 1858, 1952, 1974
MspR9I	CCNGG	8 cut(s)	137, 902, 1102, 1325, 1452, 1688, 1858, 1886
MunI	CAATTG	1 cut(s)	596
Mva1269I	GAATGC	2 cut(s)	1584, 1823
MvaI	CCWGG	6 cut(s)	902, 1102, 1325, 1452, 1688, 1886
NciI	CCSGG	2 cut(s)	137, 1858
NcoI	CCATGG	1 cut(s)	453
NdeII	GATC	6 cut(s)	783, 828, 1045, 1261, 1348, 2056
NheI	GCTAGC	1 cut(s)	913
NlaIII	CATG	6 cut(s)	9, 80, 457, 499, 1016, 1429
NlaIV	GGNNCC	4 cut(s)	325, 462, 841, 1302
NmuCI	GTSAC	2 cut(s)	1279, 1318
NsbI	TGCGCA	1 cut(s)	130
NsiI	ATGCAT	1 cut(s)	1549
NspI	RCATGY	2 cut(s)	1016, 1429
NspV	TTCGAA	2 cut(s)	1381, 1802
PaeR7I	CTCGAG	1 cut(s)	240
PciI	ACATGT	1 cut(s)	1012
PciSI	GCTCTTC	1 cut(s)	975
PcsI	WCGNNNNNNNCGW	1 cut(s)	438
PctI	GAATGC	2 cut(s)	1584, 1823
PdmI	GAANNNNTTC	1 cut(s)	1808
PfeI	GAWTC	8 cut(s)	245, 532, 571, 833, 1039, 1175, 1918, 1958
PfoI	TCCNGGA	2 cut(s)	1100, 1686
PkrI	GCNGC	7 cut(s)	199, 202, 859, 1113, 1444, 1731, 1853
PleI	GAGTC	5 cut(s)	75, 160, 322, 705, 1520
PpsI	GAGTC	5 cut(s)	75, 160, 322, 705, 1520
PpuMI	RGGWCCY	2 cut(s)	714, 1331
PscI	ACATGT	1 cut(s)	1012
PshAI	GACNNNNGTC	1 cut(s)	997
PshBI	ATTAAT	1 cut(s)	276
Psp5II	RGGWCCY	2 cut(s)	714, 1331
Psp6I	CCWGG	6 cut(s)	900, 1100, 1323, 1450, 1686, 1884
PspFI	CCCAGC	1 cut(s)	12
PspGI	CCWGG	6 cut(s)	900, 1100, 1323, 1450, 1686, 1884
PspN4I	GGNNCC	4 cut(s)	325, 462, 841, 1302
PspPI	GGNCC	4 cut(s)	180, 714, 1205, 1331
PspPPI	RGGWCCY	2 cut(s)	714, 1331
PstI	CTGCAG	1 cut(s)	1204
PsuI	RGATCY	2 cut(s)	1045, 1348
PvuII	CAGCTG	2 cut(s)	608, 1732
RsaI	GTAC	4 cut(s)	485, 1017, 1310, 1650
RsaNI	GTAC	4 cut(s)	484, 1016, 1309, 1649
SapI	GCTCTTC	1 cut(s)	975
SaqAI	TTAA	8 cut(s)	122, 276, 335, 629, 909, 1641, 1995, 2036
SatI	GCNGC	7 cut(s)	198, 201, 858, 1112, 1443, 1730, 1852
Sau3AI	GATC	6 cut(s)	783, 828, 1045, 1261, 1348, 2056
Sau96I	GGNCC	4 cut(s)	180, 714, 1205, 1331
SbfI	CCTGCAGG	1 cut(s)	1204
SchI	GAGTC	5 cut(s)	75, 161, 323, 706, 1520
ScrFI	CCNGG	8 cut(s)	137, 902, 1102, 1325, 1452, 1688, 1858, 1886
SdaI	CCTGCAGG	1 cut(s)	1204
SduI	GDGCHC	3 cut(s)	26, 889, 2078
SfaNI	GCATC	4 cut(s)	790, 869, 1032, 1534
SfcI	CTRYAG	2 cut(s)	603, 1200
Sfr274I	CTCGAG	1 cut(s)	240
SfuI	TTCGAA	2 cut(s)	1381, 1802
SinI	GGWCC	3 cut(s)	180, 714, 1331
SlaI	CTCGAG	1 cut(s)	240
SmlI	CTYRAG	2 cut(s)	240, 944
SmoI	CTYRAG	2 cut(s)	240, 944
Sse8387I	CCTGCAGG	1 cut(s)	1204
Sse9I	AATT	9 cut(s)	268, 332, 478, 596, 811, 849, 1051, 1594, 1764
SspI	AATATT	1 cut(s)	446
SspMI	CTAG	5 cut(s)	914, 1020, 1221, 1253, 2079
StyD4I	CCNGG	8 cut(s)	135, 900, 1100, 1323, 1450, 1686, 1856, 1884
StyI	CCWWGG	1 cut(s)	453
TaaI	ACNGT	7 cut(s)	884, 960, 1091, 1782, 1900, 2034, 2203
TaiI	ACGT	1 cut(s)	128
TaqI	TCGA	7 cut(s)	241, 831, 1264, 1381, 1576, 1802, 2177
TasI	AATT	9 cut(s)	268, 332, 478, 596, 811, 849, 1051, 1594, 1764
TatI	WGTACW	1 cut(s)	1308
TauI	GCSGC	4 cut(s)	200, 203, 860, 1114
TfiI	GAWTC	8 cut(s)	245, 532, 571, 833, 1039, 1175, 1918, 1958
Tru1I	TTAA	8 cut(s)	122, 276, 335, 629, 909, 1641, 1995, 2036
Tru9I	TTAA	8 cut(s)	122, 276, 335, 629, 909, 1641, 1995, 2036
TscAI	CASTG	6 cut(s)	118, 714, 963, 1132, 1237, 1905
TseFI	GTSAC	2 cut(s)	1279, 1318
TseI	GCWGC	3 cut(s)	1442, 1729, 1851
Tsp45I	GTSAC	2 cut(s)	1279, 1318
TspDTI	ATGAA	7 cut(s)	306, 345, 512, 753, 1830, 1908, 1958
TspGWI	ACGGA	3 cut(s)	453, 838, 1166
TspRI	CASTG	6 cut(s)	118, 714, 963, 1132, 1237, 1905
VpaK11BI	GGWCC	3 cut(s)	180, 714, 1331
VspI	ATTAAT	1 cut(s)	276
XapI	RAATTY	4 cut(s)	268, 478, 811, 1051
XceI	RCATGY	2 cut(s)	1016, 1429
XhoI	CTCGAG	1 cut(s)	240
XmnI	GAANNNNTTC	1 cut(s)	1808
XspI	CTAG	5 cut(s)	914, 1020, 1221, 1253, 2079
Zsp2I	ATGCAT	1 cut(s)	1549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.