Rroxscaffold_1G00040150

Rab3 GTPase-activating protein catalytic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0004994
Physical Location & Seq
Reverse (-)
57773078 .. 57778524
5447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00040150.1

Sequence Viewer

Length: 2142 bp
ATGGAGTCCCCCTCCTTCGTATCCAAAGCAAGGACAGCCTTCCATTCCGCCGCGGCTAAAGCGGAGCGAGTTCTCTCTGACTTGAAGCAACCCGATCGCCCAGATTCCGATAGGACGTCGCCGGGGAGTTTGATCCAGCAAGCCGAGGATGAATCGCCGGGGGAGTCGAGGGGTTTCCATGAATCAAAGGCTTTGAGGTGGAGACCTCCGAATATAGGGACAAAGCAGGAATGGCAGGACAGGAAGCAAGAATGGCAGGATAAGTTGAGGAATATTGGGAAAGGAAAGAAAGGAGCTGAAGATACAGAGAAGGCCGAGTATTCATCCATGGCTGTTCCTTATTATGATGAAAATTTGTACATTCTGAACATGAAAAATGATATGGAAGCAAAGAAATACTTGAGTGAGGTTTTTAATATGGTCCATATTAAGAAATTTGGTGATATAAATCCTTTTCTAGTTGTAATTGTGAATGAGATGAATGTAACCGGGGCAGAATTAATTCCCTCAGTTGAAAGCTTAGCTGCGGACAACATAGTGATTCCGCCATTATCTGTTATGAGGCAATTGGCCACAGCTGTTGAGAAATTCCTCACCAGTCAGAGAGAGGGGGGTCTGAGTCTCTCTGCAGTGAAGTCGTTAGTGCTTCGTGAAAAGGATGAAAAGCCATCTGATTTTGGTCATAATGAGAAAGTCCTATCATTGATTCACTCTCTATTTGATGCAGAGGGAAATTTTCTAAGGCGGAAGATCGATTCTGGTTCAGACACGATTACCACGGCATCTATACCAAAAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTAGTTAAGTTAGCTGAAGTCATCGGGAGCTTCAGAACCCTTAAGAAAATGACACTGTTTTGGTGTAGTGTCGTTTCCGAACTTAGAAGACTTTGGTCTGAAGAAGCATATGTACCTAGCATTCCTGTGGATGAGATTCCAGATCTGAATTCTTGTCTTTTGTACCAGCAGTTGCAAGTTATCAATTGTTGTGTTTCCAGGAAAAGGCGACGTGATATTGCCACTGAAACACTGGAGTTTGTAATTAGAGAAGCCAGTCCAAACGCTGAAGAATCATCCGTTTCTACAGACAATGCTGCGGGCCCTATTTTGTATGCTCGAATAAGCACTGGGGAACTGGTTCTCCGATTAGGTGCTGATCGCCCATACGGTAACCTAAAAATGTTGGAAACTGGTGAACCTATGTATACCCCTGTAACTCAGGAAGGACCTTTACTTACTGAAGATCTGATCAAGGAAACAGAGGAGTTTGTGCTTCGAACAGGAAGTGTTGGTGCTGGATGTTCTCAACTCCTCTCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGATTTTGTTAGATGGCATTCTCCTCCCGACTGGACAGAGGCTGAGCCAAGTACCGAGGCTGAATCTCTGGATGGTAATGATGTATCATCCACAAGAGGCCAATTAAGTAGCCGAATGCAAAAAGCAGGCAATCTCTGGCGTGAGCTATGGGATACATCCAAACCAGTTCCAGCAGTAAAACAAGTACCCCTCTTTGACGAGGACTTAGCTGTGGAAGGTATTCTGGATGGTTTTGAGGACATATCACCTTCTGAGCTTTTTGAGCAGCTGTTTATTTCTTTGCTTGGTTTAGGGTTTGTAATTGCTGAGGCCAAATTGTCCACTAACAGCGATTTTTCAAAGCTGTTCTATGAATGCAAGGACTTTGTGGTATCCACTTGTCAAGGCAAAATGTGGACAGAGAAGGTTGACGAGCTTTGTCAGGTATTCGAGACAGTTGAGGCTATGATACTCAATCCAGAGGAAGTCCTAAGAATAATGAAGCAGCCGGAAGAAACCATGACCCCTTCTCCTTCTAGTGAACCAAAAAGTCGTTTCAGGCGGCTGACCCTCAACTTCGGTGGCAAAGATAGACAGTTGAAAAAATCAGCTTCTAAGGACCAGAAGAACTCACAGAGCCCTGGTAGCCAACCATTTTCAAGTTTCTTTGACAACAAGTCATCATTATTTTCAAAAAAGCCTCCTAAGCCTGAAAGTGCATCCCCTGTTGAAAAACCGTCAATTACGGAAGACAATGATTGGACAGTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BSD Rab3-GTPase_cat

Protein Analysis

713

Amino Acids

79.61

Weight (kDa)

5.04

Isoelectric Point (pI)

53.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rab3-GTPase_cat PF13890 391 - 541 1.7e-50 Rab3 GTPase-activating protein catalytic subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 119
AccI GTMKAC 1 cut(s) 1232
AccII CGCG 1 cut(s) 53
AciI CCGC 9 cut(s) 48, 51, 53, 62, 527, 545, 745, 1124, 1930
AclWI GGATC 1 cut(s) 127
AcoI YGGCCR 1 cut(s) 570
AcsI RAATTY 5 cut(s) 352, 434, 587, 733, 973
AcuI CTGAAG 6 cut(s) 318, 841, 861, 945, 1113, 1287
AcyI GRCGYC 1 cut(s) 116
AfaI GTAC 5 cut(s) 359, 939, 989, 1441, 1575
AfiI CCNNNNNNNGG 3 cut(s) 30, 215, 1029
AflII CTTAAG 1 cut(s) 866
AgsI TTSAA 8 cut(s) 85, 515, 1360, 1728, 1969, 2028, 2061, 2099
AhdI GACNNNNNGTC 1 cut(s) 2044
AjiI CACGTC 1 cut(s) 1037
AjnI CCWGG 3 cut(s) 1022, 1372, 2008
AloI GAACNNNNNNTCC 2 cut(s) 1152, 1184
Alw21I GWGCWC 1 cut(s) 811
Alw26I GTCTC 3 cut(s) 196, 626, 1814
AlwI GGATC 1 cut(s) 127
AlwNI CAGNNNCTG 1 cut(s) 1430
AoxI GGCC 5 cut(s) 312, 570, 1126, 1486, 1698
ApaI GGGCCC 1 cut(s) 1130
ApeKI GCWGC 5 cut(s) 524, 1121, 1364, 1654, 1873
ApoI RAATTY 5 cut(s) 352, 434, 587, 733, 973
AseI ATTAAT 1 cut(s) 500
Asp700I GAANNNNTTC 3 cut(s) 501, 1164, 1608
AspS9I GGNCC 5 cut(s) 421, 1126, 1127, 1253, 1987
AsuC2I CCSGG 3 cut(s) 123, 159, 490
AsuHPI GGTGA 4 cut(s) 452, 586, 1232, 1626
AsuII TTCGAA 1 cut(s) 1303
AvaII GGWCC 3 cut(s) 421, 1253, 1987
BaeGI GKGCMC 1 cut(s) 1130
BalI TGGCCA 1 cut(s) 572
BanII GRGCYC 2 cut(s) 1130, 2009
BarI GAAGNNNNNNTAC 4 cut(s) 921, 953, 1242, 1274
BbsI GAAGAC 2 cut(s) 919, 2124
Bbv12I GWGCWC 1 cut(s) 811
BbvCI CCTCAGC 1 cut(s) 1695
BbvI GCAGC 5 cut(s) 511, 1108, 1351, 1666, 1885
BccI CCATC 4 cut(s) 676, 1395, 1454, 1610
BceAI ACGGC 1 cut(s) 795
BcgI CGANNNNNNTGC 4 cut(s) 77, 111, 618, 652
BciT130I CCWGG 3 cut(s) 1024, 1374, 2010
BciVI GTATCC 3 cut(s) 31, 1534, 1771
BclI TGATCA 1 cut(s) 1275
BcnI CCSGG 3 cut(s) 123, 159, 490
BcoDI GTCTC 3 cut(s) 196, 626, 1814
BfaI CTAG 3 cut(s) 458, 942, 1905
BfmI CTRYAG 2 cut(s) 627, 1110
BfrI CTTAAG 1 cut(s) 866
BfuI GTATCC 3 cut(s) 31, 1534, 1771
BglII AGATCT 2 cut(s) 967, 1270
BisI GCNGC 8 cut(s) 51, 54, 525, 1122, 1365, 1655, 1874, 1931
BlpI GCTNAGC 2 cut(s) 520, 1431
BlsI GCNGC 8 cut(s) 52, 55, 526, 1123, 1366, 1656, 1875, 1932
Bme1390I CCNGG 6 cut(s) 123, 159, 490, 1024, 1374, 2010
Bme18I GGWCC 3 cut(s) 421, 1253, 1987
BmeRI GACNNNNNGTC 1 cut(s) 2044
BmgBI CACGTC 1 cut(s) 1037
BmgT120I GGNCC 5 cut(s) 421, 1126, 1127, 1253, 1987
BmiI GGNNCC 1 cut(s) 1128
BmrFI CCNGG 6 cut(s) 123, 159, 490, 1024, 1374, 2010
BmrI ACTGGG 1 cut(s) 1164
BmsI GCATC 3 cut(s) 712, 791, 2096
BmuI ACTGGG 1 cut(s) 1164
BoxI GACNNNNGTC 1 cut(s) 919
BpiI GAAGAC 2 cut(s) 919, 2124
BplI GAGNNNNNCTC 1 cut(s) 28
BpmI CTGGAG 1 cut(s) 1079
Bpu10I CCTNAGC 2 cut(s) 1695, 2073
Bpu1102I GCTNAGC 2 cut(s) 520, 1431
Bpu14I TTCGAA 1 cut(s) 1303
BpuEI CTTGAG 1 cut(s) 421
BpuMI CCSGG 3 cut(s) 123, 159, 490
Bsa29I ATCGAT 1 cut(s) 753
BsaBI GATNNNNATC 1 cut(s) 447
BsaHI GRCGYC 1 cut(s) 116
BsaI GGTCTC 1 cut(s) 196
BsaJI CCNNGG 9 cut(s) 51, 122, 144, 158, 327, 489, 777, 1443, 2008
BsaXI ACNNNNNCTCC 4 cut(s) 1152, 1182, 1882, 1912
Bsc4I CCNNNNNNNGG 3 cut(s) 30, 215, 1029
Bse1I ACTGG 8 cut(s) 597, 1062, 1080, 1159, 1167, 1222, 1424, 1553
Bse8I GATNNNNATC 1 cut(s) 447
BseBI CCWGG 3 cut(s) 1024, 1374, 2010
BseCI ATCGAT 1 cut(s) 753
BseDI CCNNGG 9 cut(s) 51, 122, 144, 158, 327, 489, 777, 1443, 2008
BseJI GATNNNNATC 1 cut(s) 447
BseLI CCNNNNNNNGG 3 cut(s) 30, 215, 1029
BseMII CTCAG 6 cut(s) 522, 608, 1259, 1422, 1632, 1686
BseNI ACTGG 8 cut(s) 597, 1062, 1080, 1159, 1167, 1222, 1424, 1553
BseRI GAGGAG 4 cut(s) 801, 1304, 1328, 1401
BseSI GKGCMC 1 cut(s) 1130
BseXI GCAGC 5 cut(s) 511, 1108, 1351, 1666, 1885
Bsh1236I CGCG 1 cut(s) 53
Bsh1285I CGRYCG 1 cut(s) 97
BshFI GGCC 5 cut(s) 314, 572, 1128, 1488, 1700
BshVI ATCGAT 1 cut(s) 753
BsiEI CGRYCG 1 cut(s) 97
BsiHKAI GWGCWC 1 cut(s) 811
BsiSI CCGG 4 cut(s) 122, 158, 489, 1877
BslFI GGGAC 1 cut(s) 232
BslI CCNNNNNNNGG 3 cut(s) 30, 215, 1029
BsmAI GTCTC 3 cut(s) 196, 626, 1814
BsmFI GGGAC 1 cut(s) 232
BsmI GAATGC 4 cut(s) 945, 1405, 1509, 1748
BsnI GGCC 5 cut(s) 314, 572, 1128, 1488, 1700
Bso31I GGTCTC 1 cut(s) 196
Bsp119I TTCGAA 1 cut(s) 1303
Bsp120I GGGCCC 1 cut(s) 1126
Bsp1286I GDGCHC 3 cut(s) 811, 1130, 2009
Bsp1407I TGTACA 1 cut(s) 357
Bsp143I GATC 7 cut(s) 94, 132, 750, 967, 1183, 1270, 1275
Bsp1720I GCTNAGC 2 cut(s) 520, 1431
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 9 cut(s) 48, 51, 53, 62, 527, 545, 745, 1124, 1930
BspANI GGCC 5 cut(s) 314, 572, 1128, 1488, 1700
BspCNI CTCAG 6 cut(s) 521, 609, 1258, 1423, 1633, 1687
BspDI ATCGAT 1 cut(s) 753
BspFNI CGCG 1 cut(s) 53
BspLI GGNNCC 1 cut(s) 1128
BspMAI CTGCAG 1 cut(s) 631
BspPI GGATC 1 cut(s) 127
BspT104I TTCGAA 1 cut(s) 1303
BspTI CTTAAG 1 cut(s) 866
BspTNI GGTCTC 1 cut(s) 196
BsrGI TGTACA 1 cut(s) 357
BsrI ACTGG 8 cut(s) 597, 1062, 1080, 1159, 1167, 1222, 1424, 1553
BssECI CCNNGG 9 cut(s) 51, 122, 144, 158, 327, 489, 777, 1443, 2008
BssMI GATC 7 cut(s) 94, 132, 750, 967, 1183, 1270, 1275
BssNAI GTATAC 1 cut(s) 1233
BssNI GRCGYC 1 cut(s) 116
BssT1I CCWWGG 1 cut(s) 327
Bst1107I GTATAC 1 cut(s) 1233
Bst2UI CCWGG 3 cut(s) 1024, 1374, 2010
Bst4CI ACNGT 6 cut(s) 882, 1196, 1825, 1965, 2106, 2134
BstACI GRCGYC 1 cut(s) 116
BstAFI CTTAAG 1 cut(s) 866
BstAUI TGTACA 1 cut(s) 357
BstBI TTCGAA 1 cut(s) 1303
BstC8I GCNNGC 4 cut(s) 141, 1126, 1353, 1516
BstDSI CCRYGG 3 cut(s) 51, 327, 777
BstEII GGTNACC 1 cut(s) 1196
BstFNI CGCG 1 cut(s) 53
BstKTI GATC 7 cut(s) 97, 135, 753, 970, 1186, 1273, 1278
BstMAI GTCTC 3 cut(s) 196, 626, 1814
BstMBI GATC 7 cut(s) 94, 132, 750, 967, 1183, 1270, 1275
BstMCI CGRYCG 1 cut(s) 97
BstMWI GCNNNNNNNGC 8 cut(s) 35, 59, 232, 253, 1361, 1651, 2013, 2074
BstNI CCWGG 3 cut(s) 1024, 1374, 2010
BstNSI RCATGY 1 cut(s) 1351
BstPAI GACNNNNGTC 1 cut(s) 919
BstPI GGTNACC 1 cut(s) 1196
BstSCI CCNGG 6 cut(s) 121, 157, 488, 1022, 1372, 2008
BstSFI CTRYAG 2 cut(s) 627, 1110
BstSLI GKGCMC 1 cut(s) 1130
BstUI CGCG 1 cut(s) 53
BstV1I GCAGC 5 cut(s) 511, 1108, 1351, 1666, 1885
BstV2I GAAGAC 2 cut(s) 919, 2124
BstX2I RGATCY 2 cut(s) 967, 1270
BstYI RGATCY 2 cut(s) 967, 1270
BstZ17I GTATAC 1 cut(s) 1233
Bsu15I ATCGAT 1 cut(s) 753
BsuI GTATCC 3 cut(s) 31, 1534, 1771
BsuRI GGCC 5 cut(s) 314, 572, 1128, 1488, 1700
BsuTUI ATCGAT 1 cut(s) 753
BtgI CCRYGG 3 cut(s) 51, 327, 777
BtrI CACGTC 1 cut(s) 1037
BtsI GCAGTG 1 cut(s) 636
BtsIMutI CAGTG 5 cut(s) 636, 878, 1047, 1055, 1152
Cac8I GCNNGC 4 cut(s) 141, 1126, 1353, 1516
CaiI CAGNNNCTG 1 cut(s) 1430
Cfr13I GGNCC 5 cut(s) 421, 1126, 1127, 1253, 1987
Cfr42I CCGCGG 1 cut(s) 54
ClaI ATCGAT 1 cut(s) 753
Csp6I GTAC 5 cut(s) 358, 938, 988, 1440, 1574
CspCI CAANNNNNGTGG 4 cut(s) 562, 597, 1930, 1965
CviAII CATG 6 cut(s) 179, 328, 370, 803, 1348, 1888
CviQI GTAC 5 cut(s) 358, 938, 988, 1440, 1574
DpnI GATC 7 cut(s) 96, 134, 752, 969, 1185, 1272, 1277
DpnII GATC 7 cut(s) 94, 132, 750, 967, 1183, 1270, 1275
DriI GACNNNNNGTC 1 cut(s) 2044
EaeI YGGCCR 1 cut(s) 570
Eam1105I GACNNNNNGTC 1 cut(s) 2044
EciI GGCGGA 3 cut(s) 37, 534, 760
Eco130I CCWWGG 1 cut(s) 327
Eco24I GRGCYC 2 cut(s) 1130, 2009
Eco31I GGTCTC 1 cut(s) 196
Eco47I GGWCC 3 cut(s) 421, 1253, 1987
Eco57I CTGAAG 6 cut(s) 318, 841, 861, 945, 1113, 1287
Eco91I GGTNACC 1 cut(s) 1196
EcoO109I RGGNCCY 2 cut(s) 1127, 1253
EcoO65I GGTNACC 1 cut(s) 1196
EcoRI GAATTC 1 cut(s) 973
EcoRII CCWGG 3 cut(s) 1022, 1372, 2008
EcoT14I CCWWGG 1 cut(s) 327
EcoT38I GRGCYC 2 cut(s) 1130, 2009
ErhI CCWWGG 1 cut(s) 327
FaeI CATG 6 cut(s) 182, 331, 373, 806, 1351, 1891
FalI AAGNNNNNCTT 2 cut(s) 383, 415
FaqI GGGAC 1 cut(s) 232
FatI CATG 6 cut(s) 178, 327, 369, 802, 1347, 1887
FauI CCCGC 1 cut(s) 1117
FauNDI CATATG 1 cut(s) 934
FbaI TGATCA 1 cut(s) 1275
FblI GTMKAC 1 cut(s) 1232
Fnu4HI GCNGC 8 cut(s) 51, 54, 525, 1122, 1365, 1655, 1874, 1931
FriOI GRGCYC 2 cut(s) 1130, 2009
Fsp4HI GCNGC 8 cut(s) 51, 54, 525, 1122, 1365, 1655, 1874, 1931
FspBI CTAG 3 cut(s) 458, 942, 1905
GluI GCNGC 8 cut(s) 51, 54, 525, 1122, 1365, 1655, 1874, 1931
GsuI CTGGAG 1 cut(s) 1079
HaeIII GGCC 5 cut(s) 314, 572, 1128, 1488, 1700
HapII CCGG 4 cut(s) 122, 158, 489, 1877
Hin1I GRCGYC 1 cut(s) 116
Hin1II CATG 6 cut(s) 182, 331, 373, 806, 1351, 1891
HincII GTYRAC 1 cut(s) 1798
HindII GTYRAC 1 cut(s) 1798
HindIII AAGCTT 1 cut(s) 517
HpaII CCGG 4 cut(s) 122, 158, 489, 1877
HphI GGTGA 4 cut(s) 452, 586, 1232, 1626
Hpy166II GTNNAC 6 cut(s) 1223, 1233, 1710, 1785, 1798, 1910
Hpy8I GTNNAC 6 cut(s) 1223, 1233, 1710, 1785, 1798, 1910
Hpy99I CGWCG 2 cut(s) 121, 1038
HpyAV CCTTC 9 cut(s) 25, 49, 304, 1244, 1598, 1647, 1786, 1905, 1911
HpyCH4III ACNGT 6 cut(s) 882, 1196, 1825, 1965, 2106, 2134
HpyCH4IV ACGT 2 cut(s) 116, 1036
HpyCH4V TGCA 8 cut(s) 629, 725, 1000, 1351, 1367, 1507, 1746, 2087
HpyF10VI GCNNNNNNNGC 8 cut(s) 35, 59, 232, 253, 1361, 1651, 2013, 2074
HpySE526I ACGT 2 cut(s) 116, 1036
Hsp92I GRCGYC 1 cut(s) 116
Hsp92II CATG 6 cut(s) 182, 331, 373, 806, 1351, 1891
Ksp22I TGATCA 1 cut(s) 1275
KspI CCGCGG 1 cut(s) 54
Kzo9I GATC 7 cut(s) 94, 132, 750, 967, 1183, 1270, 1275
LmnI GCTCC 4 cut(s) 64, 293, 814, 852
Lsp1109I GCAGC 5 cut(s) 511, 1108, 1351, 1666, 1885
LweI GCATC 3 cut(s) 712, 791, 2096
MaeI CTAG 3 cut(s) 458, 942, 1905
MaeII ACGT 2 cut(s) 116, 1036
MaeIII GTNAC 3 cut(s) 484, 1196, 1240
MalI GATC 7 cut(s) 96, 134, 752, 969, 1185, 1272, 1277
MboI GATC 7 cut(s) 94, 132, 750, 967, 1183, 1270, 1275
MfeI CAATTG 2 cut(s) 566, 1009
MflI RGATCY 2 cut(s) 967, 1270
MhlI GDGCHC 3 cut(s) 811, 1130, 2009
MlsI TGGCCA 1 cut(s) 572
MluNI TGGCCA 1 cut(s) 572
MlyI GAGTC 3 cut(s) 14, 173, 628
MmeI TCCRAC 1 cut(s) 1191
Mox20I TGGCCA 1 cut(s) 572
MroXI GAANNNNTTC 3 cut(s) 501, 1164, 1608
MscI TGGCCA 1 cut(s) 572
MseI TTAA 6 cut(s) 414, 429, 500, 831, 867, 1493
MslI CAYNNNNRTG 1 cut(s) 950
Msp20I TGGCCA 1 cut(s) 572
MspA1I CMGCKG 3 cut(s) 53, 578, 1657
MspCI CTTAAG 1 cut(s) 866
MspI CCGG 4 cut(s) 122, 158, 489, 1877
MspR9I CCNGG 6 cut(s) 123, 159, 490, 1024, 1374, 2010
MunI CAATTG 2 cut(s) 566, 1009
Mva1269I GAATGC 4 cut(s) 945, 1405, 1509, 1748
MvaI CCWGG 3 cut(s) 1024, 1374, 2010
MvnI CGCG 1 cut(s) 53
MwoI GCNNNNNNNGC 8 cut(s) 35, 59, 232, 253, 1361, 1651, 2013, 2074
NciI CCSGG 3 cut(s) 123, 159, 490
NcoI CCATGG 1 cut(s) 327
NdeI CATATG 1 cut(s) 934
NdeII GATC 7 cut(s) 94, 132, 750, 967, 1183, 1270, 1275
NlaIII CATG 6 cut(s) 182, 331, 373, 806, 1351, 1891
NlaIV GGNNCC 1 cut(s) 1128
NmeAIII GCCGAG 2 cut(s) 169, 340
NspI RCATGY 1 cut(s) 1351
NspV TTCGAA 1 cut(s) 1303
PctI GAATGC 4 cut(s) 945, 1405, 1509, 1748
PdmI GAANNNNTTC 3 cut(s) 501, 1164, 1608
PfeI GAWTC 9 cut(s) 104, 152, 182, 541, 706, 755, 961, 1097, 1451
PfoI TCCNGGA 1 cut(s) 1022
PkrI GCNGC 8 cut(s) 52, 55, 526, 1123, 1366, 1656, 1875, 1932
Ple19I CGATCG 1 cut(s) 97
PleI GAGTC 3 cut(s) 13, 172, 627
PpsI GAGTC 3 cut(s) 13, 172, 627
PpuMI RGGWCCY 1 cut(s) 1253
PshAI GACNNNNGTC 1 cut(s) 919
PshBI ATTAAT 1 cut(s) 500
Psp5II RGGWCCY 1 cut(s) 1253
Psp6I CCWGG 3 cut(s) 1022, 1372, 2008
PspEI GGTNACC 1 cut(s) 1196
PspGI CCWGG 3 cut(s) 1022, 1372, 2008
PspN4I GGNNCC 1 cut(s) 1128
PspOMI GGGCCC 1 cut(s) 1126
PspPI GGNCC 5 cut(s) 421, 1126, 1127, 1253, 1987
PspPPI RGGWCCY 1 cut(s) 1253
PstI CTGCAG 1 cut(s) 631
PstNI CAGNNNCTG 1 cut(s) 1430
PsuI RGATCY 2 cut(s) 967, 1270
PvuI CGATCG 1 cut(s) 97
PvuII CAGCTG 2 cut(s) 578, 1657
RsaI GTAC 5 cut(s) 359, 939, 989, 1441, 1575
RsaNI GTAC 5 cut(s) 358, 938, 988, 1440, 1574
RseI CAYNNNNRTG 1 cut(s) 950
SacII CCGCGG 1 cut(s) 54
SaqAI TTAA 6 cut(s) 414, 429, 500, 831, 867, 1493
SatI GCNGC 8 cut(s) 51, 54, 525, 1122, 1365, 1655, 1874, 1931
Sau3AI GATC 7 cut(s) 94, 132, 750, 967, 1183, 1270, 1275
Sau96I GGNCC 5 cut(s) 421, 1126, 1127, 1253, 1987
SchI GAGTC 3 cut(s) 14, 173, 628
ScrFI CCNGG 6 cut(s) 123, 159, 490, 1024, 1374, 2010
SduI GDGCHC 3 cut(s) 811, 1130, 2009
SfaNI GCATC 3 cut(s) 712, 791, 2096
SfcI CTRYAG 2 cut(s) 627, 1110
Sfr303I CCGCGG 1 cut(s) 54
SfuI TTCGAA 1 cut(s) 1303
SgrBI CCGCGG 1 cut(s) 54
SinI GGWCC 3 cut(s) 421, 1253, 1987
SmiMI CAYNNNNRTG 1 cut(s) 950
SmlI CTYRAG 2 cut(s) 400, 866
SmoI CTYRAG 2 cut(s) 400, 866
SsiI CCGC 9 cut(s) 48, 51, 53, 62, 527, 545, 745, 1124, 1930
SspI AATATT 1 cut(s) 274
SspMI CTAG 3 cut(s) 458, 942, 1905
StyD4I CCNGG 6 cut(s) 121, 157, 488, 1022, 1372, 2008
StyI CCWWGG 1 cut(s) 327
TaaI ACNGT 6 cut(s) 882, 1196, 1825, 1965, 2106, 2134
TaiI ACGT 2 cut(s) 119, 1039
TaqI TCGA 5 cut(s) 167, 753, 1144, 1303, 1818
TatI WGTACW 1 cut(s) 357
TauI GCSGC 3 cut(s) 53, 56, 1933
TfiI GAWTC 9 cut(s) 104, 152, 182, 541, 706, 755, 961, 1097, 1451
Tru1I TTAA 6 cut(s) 414, 429, 500, 831, 867, 1493
Tru9I TTAA 6 cut(s) 414, 429, 500, 831, 867, 1493
TscAI CASTG 5 cut(s) 636, 885, 1054, 1062, 1159
TseI GCWGC 5 cut(s) 524, 1121, 1364, 1654, 1873
TspGWI ACGGA 2 cut(s) 1093, 2129
TspRI CASTG 5 cut(s) 636, 885, 1054, 1062, 1159
Vha464I CTTAAG 1 cut(s) 866
VpaK11BI GGWCC 3 cut(s) 421, 1253, 1987
VspI ATTAAT 1 cut(s) 500
XapI RAATTY 5 cut(s) 352, 434, 587, 733, 973
XceI RCATGY 1 cut(s) 1351
XcmI CCANNNNNNNNNTGG 1 cut(s) 1054
XmiI GTMKAC 1 cut(s) 1232
XmnI GAANNNNTTC 3 cut(s) 501, 1164, 1608
XspI CTAG 3 cut(s) 458, 942, 1905
ZraI GACGTC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.