RchiOBHm_Chr5g0040501

Rab3 GTPase-activating protein catalytic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0004994
Physical Location & Seq
Forward (+)
35189915 .. 35195349
5435 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31900

Sequence Viewer

Length: 2094 bp
ATGGAGTCCCCCTCCTTCGTATCCAAAGCAAGGACAGCCTTCCATTCCGCCGCGGCTAAAGCGGAGCGAGTTCTCTCTGACTTGAAGCAACCCGATCGCCCAGATTCCGATAGGACGTCGCCGAGGATTTTGATCCAGCAAGCCGAGGATGAATCGCCGGGGGAGTCGAGGGGTTTCCATGAATCAAAGGCTTTGAGGTGGAGACCTCCGAATATAGGGACAAAGCAGGAATGGCAGGACAGGAAGCAAGAATGGCAGGATAAGTTGAGGAATATTGGAAAAGGAAAGAAAGGAGTTGAAGATACAGAGAAGGCCGAGTATTCATCCATGGCTGTTCCTTATTATGATGAAAATTTGTACATTCTGAACATGAAAAATGATATGGAAGCAAAGGGGGCAGAATTAATTCCCTCAGTTGAAAGCTTAGCTGCGGACAACATAGTGATTCCGCCATTATCTGTTATGAGGCAATTGGCCACAGCTGTTGAGGCTGGAAAGAAGTCTAAATCAATGAAAGATCTTTTGGCATCATCAGGAAATTCCTCACCAGTCAGAGAGAGGGGGGGTCTGAGTCTCTCTGCTGTAAAGTCATTAGTGCTTCGTGAAAAGGAGGAAAAGCCATCTGATTTTGGTCATAATGAGAAAGTCCTATCATTGATTCACTCTTTATTTGATGCAGAGGGAAATTTTCTAAGGCGGAAGATCGATTCTGGTTCAGACACGATTACCATGGCATCTATACCAAAAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTAGTTAAGTTAGCGGAAGTCATTGGGAGCTTCAGAACCCTTAAGAAAATGACACTGTTTTGGTGTAGTGTTGTTTCCGAACTTAGAAGACTTTGGTCTGAAGAAGCATATGTACCTAGCATTCCTGTGGATGAGATTCCAGATCTGAATTCTTGTCTTTTGTACCAGCGGTTGCAAGTTATCAATTGTTGTGTTTCCAGGAAAAGGCGACGTGATATTGCCACTGAAACACTAGAGTTTGTAATTAGAGAAGCCAGTCCAAACGCTGAAGAATCATCCGTTTCTACAGACAATGCTGTGGGCCCTGTTTTGTATGCTCGTATAAGCACTGGGGAACTGGTTCTCCGATTAGGTGCTGATCGCCCATACGGTAACCTAAAAATGTTGGAAACTGGTGAACCTATGTATACCCCTGTAACTCAGGAAGGACCTTTACTTACTGAAGATCTGATCAAGGAAACAGAGGAGTTTGTGCTTCGAACGGGAAGTGTTGGTGCTGGATGTTCTCAACTCCTCTCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGATTTTGTTAGATGGCATTCTCCTCCTGACTGGACAGAGGCTGAGCCAAGTACCGAGGCTGAATCTCTGGATGGTAATGACGTATCATCTGCAAGAGGCCAATTAAGTAGCCGAATGCAAAAAGCAGGCAATCTCTGGCATGAGCTATGGGATACATCCAAACCAGTTCCAGCAGTAAAACAAGTACCCCTCTTTGATGAGGACTTAGCTGTGGAAGGTATTCTGGATGGTTTTGAGGACATATCACCTTCTGAGCTTTTTGAGCAGCTGTTTATTTCTTTGCTTGGTTTAGGGTTTGTAATTGCTGAGGCCAAATTGTCCACTAACAGCGATTTTTCAAAGCTGTTCTATGAATGCAAGGACTTTGTGGTATCCACTTGTCAAGGCAAAATGTGGACAGAGAAGGTTGAAGAGCTTTGTCAGGTATTTGAAACAGTTGAGGCTATGATACTCAATCCAGAGGAAGTCCTAAGAATAATGAAGCAGCCGGAAGAAACCATGACCCCTTCTCCTTCTAGTGAACCAAAAAGTCGTTTCAGGCGACTGACCCTCAACTTCGGTGGCAAAGATAGACAGTTGAAAAAATCAGCCTCTAAGGACCAGAAGAACTCACAAAGCCCTGGTAGCCAACCATTTTCAAGTTTCTTTGACAACAAGTCATCATTATTTTCAAAAAAGCCTCCTAAGCCTGAAAGTGCATCCCCTGTTGAAAAACCGTCAATTACGGAAGACAATGATTGGACAGTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BSD Rab3-GTPase_cat

Protein Analysis

697

Amino Acids

77.62

Weight (kDa)

5.16

Isoelectric Point (pI)

56.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rab3-GTPase_cat PF13890 375 - 525 2e-50 Rab3 GTPase-activating protein catalytic subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 119
AccI GTMKAC 1 cut(s) 1184
AccII CGCG 1 cut(s) 53
AciI CCGC 9 cut(s) 48, 51, 53, 62, 431, 449, 697, 791, 946
AclWI GGATC 1 cut(s) 127
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 4 cut(s) 352, 538, 685, 925
AcuI CTGAAG 4 cut(s) 793, 897, 1065, 1239
AcyI GRCGYC 1 cut(s) 116
AfaI GTAC 5 cut(s) 359, 891, 941, 1393, 1527
AfiI CCNNNNNNNGG 3 cut(s) 30, 215, 981
AflII CTTAAG 1 cut(s) 818
AhdI GACNNNNNGTC 1 cut(s) 1996
AjiI CACGTC 1 cut(s) 989
AjnI CCWGG 3 cut(s) 974, 1324, 1960
AjuI GAANNNNNNNTTGG 2 cut(s) 506, 538
AloI GAACNNNNNNTCC 2 cut(s) 1104, 1136
Alw21I GWGCWC 1 cut(s) 763
Alw26I GTCTC 2 cut(s) 196, 578
AlwI GGATC 1 cut(s) 127
AlwNI CAGNNNCTG 1 cut(s) 1382
AoxI GGCC 5 cut(s) 312, 474, 1078, 1438, 1650
ApaI GGGCCC 1 cut(s) 1082
ApeKI GCWGC 4 cut(s) 428, 1316, 1606, 1825
ApoI RAATTY 4 cut(s) 352, 538, 685, 925
AseI ATTAAT 1 cut(s) 404
Asp700I GAANNNNTTC 3 cut(s) 405, 1116, 1560
AspS9I GGNCC 4 cut(s) 1078, 1079, 1205, 1939
AsuC2I CCSGG 1 cut(s) 159
AsuHPI GGTGA 3 cut(s) 537, 1184, 1578
AsuII TTCGAA 1 cut(s) 1255
AvaII GGWCC 2 cut(s) 1205, 1939
BaeGI GKGCMC 1 cut(s) 1082
BalI TGGCCA 1 cut(s) 476
BanII GRGCYC 1 cut(s) 1082
BarI GAAGNNNNNNTAC 4 cut(s) 873, 905, 1194, 1226
BbsI GAAGAC 2 cut(s) 871, 2076
Bbv12I GWGCWC 1 cut(s) 763
BbvCI CCTCAGC 1 cut(s) 1647
BbvI GCAGC 4 cut(s) 415, 1303, 1618, 1837
BccI CCATC 4 cut(s) 628, 1347, 1406, 1562
BcgI CGANNNNNNTGC 2 cut(s) 77, 111
BciT130I CCWGG 3 cut(s) 976, 1326, 1962
BciVI GTATCC 3 cut(s) 31, 1486, 1723
BclI TGATCA 1 cut(s) 1227
BcnI CCSGG 1 cut(s) 159
BcoDI GTCTC 2 cut(s) 196, 578
BfaI CTAG 3 cut(s) 894, 1010, 1857
BfmI CTRYAG 1 cut(s) 1062
BfrI CTTAAG 1 cut(s) 818
BfuI GTATCC 3 cut(s) 31, 1486, 1723
BglII AGATCT 3 cut(s) 517, 919, 1222
BisI GCNGC 6 cut(s) 51, 54, 429, 1317, 1607, 1826
BlpI GCTNAGC 2 cut(s) 424, 1383
BlsI GCNGC 6 cut(s) 52, 55, 430, 1318, 1608, 1827
Bme1390I CCNGG 4 cut(s) 159, 976, 1326, 1962
Bme18I GGWCC 2 cut(s) 1205, 1939
BmeRI GACNNNNNGTC 1 cut(s) 1996
BmgBI CACGTC 1 cut(s) 989
BmgT120I GGNCC 4 cut(s) 1078, 1079, 1205, 1939
BmiI GGNNCC 1 cut(s) 1080
BmrFI CCNGG 4 cut(s) 159, 976, 1326, 1962
BmrI ACTGGG 1 cut(s) 1116
BmsI GCATC 4 cut(s) 536, 664, 743, 2048
BmuI ACTGGG 1 cut(s) 1116
BoxI GACNNNNGTC 1 cut(s) 871
BpiI GAAGAC 2 cut(s) 871, 2076
BplI GAGNNNNNCTC 1 cut(s) 28
Bpu10I CCTNAGC 2 cut(s) 1647, 2025
Bpu1102I GCTNAGC 2 cut(s) 424, 1383
Bpu14I TTCGAA 1 cut(s) 1255
BpuMI CCSGG 1 cut(s) 159
Bsa29I ATCGAT 1 cut(s) 705
BsaBI GATNNNNATC 1 cut(s) 131
BsaHI GRCGYC 1 cut(s) 116
BsaI GGTCTC 1 cut(s) 196
BsaJI CCNNGG 8 cut(s) 51, 122, 144, 158, 327, 729, 1395, 1960
BsaXI ACNNNNNCTCC 4 cut(s) 1104, 1134, 1834, 1864
Bsc4I CCNNNNNNNGG 3 cut(s) 30, 215, 981
Bse1I ACTGG 7 cut(s) 548, 1032, 1111, 1119, 1174, 1376, 1505
Bse8I GATNNNNATC 1 cut(s) 131
BseBI CCWGG 3 cut(s) 976, 1326, 1962
BseCI ATCGAT 1 cut(s) 705
BseDI CCNNGG 8 cut(s) 51, 122, 144, 158, 327, 729, 1395, 1960
BseGI GGATG 9 cut(s) 154, 323, 913, 1052, 1283, 1417, 1496, 1573, 2039
BseJI GATNNNNATC 1 cut(s) 131
BseLI CCNNNNNNNGG 3 cut(s) 30, 215, 981
BseMII CTCAG 6 cut(s) 426, 560, 1211, 1374, 1584, 1638
BseNI ACTGG 7 cut(s) 548, 1032, 1111, 1119, 1174, 1376, 1505
BseRI GAGGAG 4 cut(s) 753, 1256, 1280, 1353
BseSI GKGCMC 1 cut(s) 1082
BseXI GCAGC 4 cut(s) 415, 1303, 1618, 1837
Bsh1236I CGCG 1 cut(s) 53
Bsh1285I CGRYCG 1 cut(s) 97
BshFI GGCC 5 cut(s) 314, 476, 1080, 1440, 1652
BshVI ATCGAT 1 cut(s) 705
BsiEI CGRYCG 1 cut(s) 97
BsiHKAI GWGCWC 1 cut(s) 763
BsiSI CCGG 2 cut(s) 158, 1829
BslFI GGGAC 1 cut(s) 232
BslI CCNNNNNNNGG 3 cut(s) 30, 215, 981
BsmAI GTCTC 2 cut(s) 196, 578
BsmFI GGGAC 1 cut(s) 232
BsmI GAATGC 4 cut(s) 897, 1357, 1461, 1700
BsnI GGCC 5 cut(s) 314, 476, 1080, 1440, 1652
Bso31I GGTCTC 1 cut(s) 196
Bsp119I TTCGAA 1 cut(s) 1255
Bsp120I GGGCCC 1 cut(s) 1078
Bsp1286I GDGCHC 2 cut(s) 763, 1082
Bsp1407I TGTACA 1 cut(s) 357
Bsp143I GATC 8 cut(s) 94, 132, 517, 702, 919, 1135, 1222, 1227
Bsp1720I GCTNAGC 2 cut(s) 424, 1383
Bsp19I CCATGG 2 cut(s) 327, 729
BspACI CCGC 9 cut(s) 48, 51, 53, 62, 431, 449, 697, 791, 946
BspANI GGCC 5 cut(s) 314, 476, 1080, 1440, 1652
BspCNI CTCAG 6 cut(s) 425, 561, 1210, 1375, 1585, 1639
BspDI ATCGAT 1 cut(s) 705
BspFNI CGCG 1 cut(s) 53
BspLI GGNNCC 1 cut(s) 1080
BspPI GGATC 1 cut(s) 127
BspQI GCTCTTC 1 cut(s) 1746
BspT104I TTCGAA 1 cut(s) 1255
BspTI CTTAAG 1 cut(s) 818
BspTNI GGTCTC 1 cut(s) 196
BsrGI TGTACA 1 cut(s) 357
BsrI ACTGG 7 cut(s) 548, 1032, 1111, 1119, 1174, 1376, 1505
BssECI CCNNGG 8 cut(s) 51, 122, 144, 158, 327, 729, 1395, 1960
BssMI GATC 8 cut(s) 94, 132, 517, 702, 919, 1135, 1222, 1227
BssNAI GTATAC 1 cut(s) 1185
BssNI GRCGYC 1 cut(s) 116
BssT1I CCWWGG 2 cut(s) 327, 729
Bst1107I GTATAC 1 cut(s) 1185
Bst2UI CCWGG 3 cut(s) 976, 1326, 1962
Bst4CI ACNGT 6 cut(s) 834, 1148, 1777, 1917, 2058, 2086
Bst6I CTCTTC 1 cut(s) 1746
BstACI GRCGYC 1 cut(s) 116
BstAFI CTTAAG 1 cut(s) 818
BstAUI TGTACA 1 cut(s) 357
BstBI TTCGAA 1 cut(s) 1255
BstC8I GCNNGC 3 cut(s) 141, 1305, 1468
BstDSI CCRYGG 3 cut(s) 51, 327, 729
BstEII GGTNACC 1 cut(s) 1148
BstF5I GGATG 9 cut(s) 154, 323, 913, 1052, 1283, 1417, 1496, 1573, 2039
BstFNI CGCG 1 cut(s) 53
BstKTI GATC 8 cut(s) 97, 135, 520, 705, 922, 1138, 1225, 1230
BstMAI GTCTC 2 cut(s) 196, 578
BstMBI GATC 8 cut(s) 94, 132, 517, 702, 919, 1135, 1222, 1227
BstMCI CGRYCG 1 cut(s) 97
BstNI CCWGG 3 cut(s) 976, 1326, 1962
BstNSI RCATGY 1 cut(s) 1303
BstPAI GACNNNNGTC 1 cut(s) 871
BstPI GGTNACC 1 cut(s) 1148
BstSCI CCNGG 4 cut(s) 157, 974, 1324, 1960
BstSFI CTRYAG 1 cut(s) 1062
BstSLI GKGCMC 1 cut(s) 1082
BstUI CGCG 1 cut(s) 53
BstV1I GCAGC 4 cut(s) 415, 1303, 1618, 1837
BstV2I GAAGAC 2 cut(s) 871, 2076
BstX2I RGATCY 3 cut(s) 517, 919, 1222
BstYI RGATCY 3 cut(s) 517, 919, 1222
BstZ17I GTATAC 1 cut(s) 1185
Bsu15I ATCGAT 1 cut(s) 705
BsuI GTATCC 3 cut(s) 31, 1486, 1723
BsuRI GGCC 5 cut(s) 314, 476, 1080, 1440, 1652
BsuTUI ATCGAT 1 cut(s) 705
BtgI CCRYGG 3 cut(s) 51, 327, 729
BtrI CACGTC 1 cut(s) 989
BtsCI GGATG 9 cut(s) 154, 323, 913, 1052, 1283, 1417, 1496, 1573, 2039
BtsIMutI CAGTG 3 cut(s) 830, 999, 1104
Cac8I GCNNGC 3 cut(s) 141, 1305, 1468
CaiI CAGNNNCTG 1 cut(s) 1382
Cfr13I GGNCC 4 cut(s) 1078, 1079, 1205, 1939
Cfr42I CCGCGG 1 cut(s) 54
ClaI ATCGAT 1 cut(s) 705
Csp6I GTAC 5 cut(s) 358, 890, 940, 1392, 1526
CspCI CAANNNNNGTGG 4 cut(s) 466, 501, 1882, 1917
CviAII CATG 8 cut(s) 179, 328, 370, 730, 755, 1300, 1481, 1840
CviQI GTAC 5 cut(s) 358, 890, 940, 1392, 1526
DpnI GATC 8 cut(s) 96, 134, 519, 704, 921, 1137, 1224, 1229
DpnII GATC 8 cut(s) 94, 132, 517, 702, 919, 1135, 1222, 1227
DriI GACNNNNNGTC 1 cut(s) 1996
EaeI YGGCCR 1 cut(s) 474
Eam1104I CTCTTC 1 cut(s) 1746
Eam1105I GACNNNNNGTC 1 cut(s) 1996
EarI CTCTTC 1 cut(s) 1746
EciI GGCGGA 3 cut(s) 37, 438, 712
Eco130I CCWWGG 2 cut(s) 327, 729
Eco24I GRGCYC 1 cut(s) 1082
Eco31I GGTCTC 1 cut(s) 196
Eco47I GGWCC 2 cut(s) 1205, 1939
Eco57I CTGAAG 4 cut(s) 793, 897, 1065, 1239
Eco91I GGTNACC 1 cut(s) 1148
EcoO109I RGGNCCY 2 cut(s) 1079, 1205
EcoO65I GGTNACC 1 cut(s) 1148
EcoRI GAATTC 1 cut(s) 925
EcoRII CCWGG 3 cut(s) 974, 1324, 1960
EcoT14I CCWWGG 2 cut(s) 327, 729
EcoT38I GRGCYC 1 cut(s) 1082
ErhI CCWWGG 2 cut(s) 327, 729
FaeI CATG 8 cut(s) 182, 331, 373, 733, 758, 1303, 1484, 1843
FaqI GGGAC 1 cut(s) 232
FatI CATG 8 cut(s) 178, 327, 369, 729, 754, 1299, 1480, 1839
FauNDI CATATG 1 cut(s) 886
FbaI TGATCA 1 cut(s) 1227
FblI GTMKAC 1 cut(s) 1184
Fnu4HI GCNGC 6 cut(s) 51, 54, 429, 1317, 1607, 1826
FokI GGATG 9 cut(s) 161, 310, 920, 1039, 1290, 1424, 1483, 1580, 2026
FriOI GRGCYC 1 cut(s) 1082
Fsp4HI GCNGC 6 cut(s) 51, 54, 429, 1317, 1607, 1826
FspBI CTAG 3 cut(s) 894, 1010, 1857
GluI GCNGC 6 cut(s) 51, 54, 429, 1317, 1607, 1826
HaeIII GGCC 5 cut(s) 314, 476, 1080, 1440, 1652
HapII CCGG 2 cut(s) 158, 1829
Hin1I GRCGYC 1 cut(s) 116
Hin1II CATG 8 cut(s) 182, 331, 373, 733, 758, 1303, 1484, 1843
HindIII AAGCTT 1 cut(s) 421
HpaII CCGG 2 cut(s) 158, 1829
HphI GGTGA 3 cut(s) 537, 1184, 1578
Hpy166II GTNNAC 5 cut(s) 1175, 1185, 1662, 1737, 1862
Hpy188III TCNNGA 9 cut(s) 534, 602, 767, 917, 1199, 1367, 1409, 1565, 1799
Hpy8I GTNNAC 5 cut(s) 1175, 1185, 1662, 1737, 1862
Hpy99I CGWCG 2 cut(s) 121, 990
HpyAV CCTTC 9 cut(s) 25, 49, 304, 1196, 1550, 1599, 1738, 1857, 1863
HpyCH4III ACNGT 6 cut(s) 834, 1148, 1777, 1917, 2058, 2086
HpyCH4IV ACGT 3 cut(s) 116, 988, 1422
HpyCH4V TGCA 8 cut(s) 677, 952, 1303, 1319, 1433, 1459, 1698, 2039
HpySE526I ACGT 3 cut(s) 116, 988, 1422
Hsp92I GRCGYC 1 cut(s) 116
Hsp92II CATG 8 cut(s) 182, 331, 373, 733, 758, 1303, 1484, 1843
Ksp22I TGATCA 1 cut(s) 1227
KspI CCGCGG 1 cut(s) 54
Kzo9I GATC 8 cut(s) 94, 132, 517, 702, 919, 1135, 1222, 1227
LguI GCTCTTC 1 cut(s) 1746
LmnI GCTCC 3 cut(s) 64, 766, 804
Lsp1109I GCAGC 4 cut(s) 415, 1303, 1618, 1837
LweI GCATC 4 cut(s) 536, 664, 743, 2048
MaeI CTAG 3 cut(s) 894, 1010, 1857
MaeII ACGT 3 cut(s) 116, 988, 1422
MaeIII GTNAC 2 cut(s) 1148, 1192
MalI GATC 8 cut(s) 96, 134, 519, 704, 921, 1137, 1224, 1229
MboI GATC 8 cut(s) 94, 132, 517, 702, 919, 1135, 1222, 1227
MfeI CAATTG 2 cut(s) 470, 961
MflI RGATCY 3 cut(s) 517, 919, 1222
MhlI GDGCHC 2 cut(s) 763, 1082
MlsI TGGCCA 1 cut(s) 476
MluNI TGGCCA 1 cut(s) 476
MlyI GAGTC 3 cut(s) 14, 173, 580
MmeI TCCRAC 1 cut(s) 1143
Mox20I TGGCCA 1 cut(s) 476
MroXI GAANNNNTTC 3 cut(s) 405, 1116, 1560
MscI TGGCCA 1 cut(s) 476
MseI TTAA 4 cut(s) 404, 783, 819, 1445
MslI CAYNNNNRTG 1 cut(s) 902
Msp20I TGGCCA 1 cut(s) 476
MspA1I CMGCKG 4 cut(s) 53, 482, 946, 1609
MspCI CTTAAG 1 cut(s) 818
MspI CCGG 2 cut(s) 158, 1829
MspR9I CCNGG 4 cut(s) 159, 976, 1326, 1962
MunI CAATTG 2 cut(s) 470, 961
Mva1269I GAATGC 4 cut(s) 897, 1357, 1461, 1700
MvaI CCWGG 3 cut(s) 976, 1326, 1962
MvnI CGCG 1 cut(s) 53
NciI CCSGG 1 cut(s) 159
NcoI CCATGG 2 cut(s) 327, 729
NdeI CATATG 1 cut(s) 886
NdeII GATC 8 cut(s) 94, 132, 517, 702, 919, 1135, 1222, 1227
NlaIII CATG 8 cut(s) 182, 331, 373, 733, 758, 1303, 1484, 1843
NlaIV GGNNCC 1 cut(s) 1080
NmeAIII GCCGAG 3 cut(s) 147, 169, 340
NspI RCATGY 1 cut(s) 1303
NspV TTCGAA 1 cut(s) 1255
PciSI GCTCTTC 1 cut(s) 1746
PcsI WCGNNNNNNNCGW 1 cut(s) 1879
PctI GAATGC 4 cut(s) 897, 1357, 1461, 1700
PdmI GAANNNNTTC 3 cut(s) 405, 1116, 1560
PfeI GAWTC 9 cut(s) 104, 152, 182, 445, 658, 707, 913, 1049, 1403
PfoI TCCNGGA 1 cut(s) 974
PkrI GCNGC 6 cut(s) 52, 55, 430, 1318, 1608, 1827
Ple19I CGATCG 1 cut(s) 97
PleI GAGTC 3 cut(s) 13, 172, 579
PpsI GAGTC 3 cut(s) 13, 172, 579
PpuMI RGGWCCY 1 cut(s) 1205
PshAI GACNNNNGTC 1 cut(s) 871
PshBI ATTAAT 1 cut(s) 404
Psp5II RGGWCCY 1 cut(s) 1205
Psp6I CCWGG 3 cut(s) 974, 1324, 1960
PspEI GGTNACC 1 cut(s) 1148
PspGI CCWGG 3 cut(s) 974, 1324, 1960
PspN4I GGNNCC 1 cut(s) 1080
PspOMI GGGCCC 1 cut(s) 1078
PspPI GGNCC 4 cut(s) 1078, 1079, 1205, 1939
PspPPI RGGWCCY 1 cut(s) 1205
PstNI CAGNNNCTG 1 cut(s) 1382
PsuI RGATCY 3 cut(s) 517, 919, 1222
PvuI CGATCG 1 cut(s) 97
PvuII CAGCTG 2 cut(s) 482, 1609
RsaI GTAC 5 cut(s) 359, 891, 941, 1393, 1527
RsaNI GTAC 5 cut(s) 358, 890, 940, 1392, 1526
RseI CAYNNNNRTG 1 cut(s) 902
SacII CCGCGG 1 cut(s) 54
SapI GCTCTTC 1 cut(s) 1746
SaqAI TTAA 4 cut(s) 404, 783, 819, 1445
SatI GCNGC 6 cut(s) 51, 54, 429, 1317, 1607, 1826
Sau3AI GATC 8 cut(s) 94, 132, 517, 702, 919, 1135, 1222, 1227
Sau96I GGNCC 4 cut(s) 1078, 1079, 1205, 1939
SchI GAGTC 3 cut(s) 14, 173, 580
ScrFI CCNGG 4 cut(s) 159, 976, 1326, 1962
SduI GDGCHC 2 cut(s) 763, 1082
SfaNI GCATC 4 cut(s) 536, 664, 743, 2048
SfcI CTRYAG 1 cut(s) 1062
Sfr303I CCGCGG 1 cut(s) 54
SfuI TTCGAA 1 cut(s) 1255
SgrBI CCGCGG 1 cut(s) 54
SinI GGWCC 2 cut(s) 1205, 1939
SmiMI CAYNNNNRTG 1 cut(s) 902
SmlI CTYRAG 1 cut(s) 818
SmoI CTYRAG 1 cut(s) 818
SsiI CCGC 9 cut(s) 48, 51, 53, 62, 431, 449, 697, 791, 946
SspI AATATT 1 cut(s) 274
SspMI CTAG 3 cut(s) 894, 1010, 1857
StyD4I CCNGG 4 cut(s) 157, 974, 1324, 1960
StyI CCWWGG 2 cut(s) 327, 729
TaaI ACNGT 6 cut(s) 834, 1148, 1777, 1917, 2058, 2086
TaiI ACGT 3 cut(s) 119, 991, 1425
TaqI TCGA 3 cut(s) 167, 705, 1255
TatI WGTACW 1 cut(s) 357
TauI GCSGC 2 cut(s) 53, 56
TfiI GAWTC 9 cut(s) 104, 152, 182, 445, 658, 707, 913, 1049, 1403
Tru1I TTAA 4 cut(s) 404, 783, 819, 1445
Tru9I TTAA 4 cut(s) 404, 783, 819, 1445
TscAI CASTG 3 cut(s) 837, 1006, 1111
TseI GCWGC 4 cut(s) 428, 1316, 1606, 1825
TspDTI ATGAA 9 cut(s) 165, 195, 312, 363, 386, 527, 743, 1707, 1835
TspGWI ACGGA 2 cut(s) 1045, 2081
TspRI CASTG 3 cut(s) 837, 1006, 1111
Vha464I CTTAAG 1 cut(s) 818
VpaK11BI GGWCC 2 cut(s) 1205, 1939
VspI ATTAAT 1 cut(s) 404
XapI RAATTY 4 cut(s) 352, 538, 685, 925
XceI RCATGY 1 cut(s) 1303
XmiI GTMKAC 1 cut(s) 1184
XmnI GAANNNNTTC 3 cut(s) 405, 1116, 1560
XspI CTAG 3 cut(s) 894, 1010, 1857
ZraI GACGTC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.