RLG00000033984

Rab3 GTPase-activating protein catalytic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0004994
Physical Location & Seq
Forward (+)
35038955 .. 35044120
5166 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033984

Sequence Viewer

Length: 2115 bp
ATGGAGTCCCCCTCCTTCGTATCCAAAGCAAGGACAGCCTTCCATTCCGCCGCGGCTAAAGCGGAGCGAGTTCTCTCTGACTTGAAGCAACCCGATCGCCCAGATTCCGATAGGACGTCGCCGGGGAGTTTGATCCAGCAAGCCGAGGATGAATCGCCGGGGGAGTCGAGGGGTTTCCATGAATCAAAGGCTTTGAGGTGGAGACCTCCGAATATAGGGACAAAGCAGGAATGGCAGGACAGGAAGCAGGAATGGCAGGACAGGAAGCAAGAATGGCAGGATAAGTTGAGGAATATTGGAAAGGGAAAGAAAGGAGTTGAAGATACAGAGAAGGCCGAGTATTCGTCCATGGCTGTTCCTTATTATGATGAAAATTTGTACATTCTGAACATGAAAAATGATATGGAAGCAAAGGGGGCAGAATTAATTCCCTCAGTTGAAAGCTTAGCTGCAGACAACATAGTGATTCCGCCATTGTCTGTTATGAGGCAATTGGCCACAGCTGTTGAGGCTGGAAAGAAGTCTAAATCAATGAAAGATCTTTTGGCATCATCAGGAAATTCCTCACCAGTCAGAGAGAGGGGGGGTCTGAGTCTCTCTGCAGTGAAGTCATTAGTGCTTCGTGAAAAGGATGAAAAGCCATCTGATTTTGGTCATAATGAGAAAGTCTTATCATTGATTCACTCTCTATTTGACGCAGAGGGAAATTTTCTAAGGCGGAAGATCGATTCTGGTTCAGACACGATTACCACGGCATCTATGCCAAAAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTAGTTAAGTTAGCTGAAGTCATCGGGAGCTTCAGAACCCTTAAGAAAATGACACTGTTTTGGTGTAGTGTTGTTTCCGAACTTAGAAGACTTTGGTCTGAAGAAGCATATGTACCTAGCATTCCTGTGGATGAGATTCCAGATCTGAATTCTTGTCTTTTGTACCAGCGGTTGCAAGTTATCAATTGTTGTGTTTCCAGGAAAAGGCGAAGTGATATTGCCACTGAAACACTAGAGTTTGTAATTAGAGAAGCCAGTCCAAACGCTGAAGAATCATCCGTTTCTACAGACAATGCTGCGGGCCCTATTTTGTATGCTCGAATAAGCACTGGGGAACTGGTTCTCCGATTAGGTGCTGATCGCCCATACGGTAACCTAAAAATGTTGGAAACTGGTGAACCTATGTATACCCCTGTAACTCAGGAAGGACCTTTACTTACTGAAGATCTGATCAAGGAAACAGAGGAGTTTGTGCTTCGAACAGGAAGTGTTGGTGCTGGATGTTCTCAACTCCTCTCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGATTTTGTTAGATGGCATTCTCCTCCTGACTGGACAGAGGCTGAGCCAAGTACCGAGGCTGAATCTCTGGATGGTAATGACGTATCATCCACAAGAGGCCAATTAAGTAGCCGAATGCAAAAAGCAGGCAATCTCTGGCGTGAGCTATGGGATACATCCAAACCAGTTCCAGCAGTAAAACAAGTACCCCTCTTTGACGAGGACTTAGCTGTGGAAGGTATTCTGGATGGTTTTGAGGACATATCACCTTCTGAGCTTTTTGAGCAGCTGTTTATTTCTTTGCTTGGTTTAGGGTTTGTAATTGCTGAGGCCAAATTGTCCACTAACAGCGATTTTTCAAAGCTGTTCTATGAATGCAAGGACTTTGTGGTATCCACTTGTCAAGGAAAAATGTGGACAGAGAAGGTTGATGAGCTTTGTCAGGTATTTGAAACAGTTGAGGCTATGATACTCAATCCAGAGGAAGTCCTAAGAATAATGAAGCAGCCGGAAGAAACCGTGACCCCTTCTCCTTCTAGTGAACCAAAAAGTCGTTTCAGGCGGCTGACCCTCAACTTCGGTGGCAAAGATAGACAGTTGAAAAAATCAGCTTCTAGGGACCAGAAGAACTCACAAAGCCCTGGTAGCCAACCATTTTCAAGTTTCTTTGACAACAAGTCATCATTATTTTCAAAAAAGCCTCCTAAGCCTGAAAGTGCATCCCCTGTTGAAAAGCCGTCAATTACAGAAGACAATGATTGGACAGTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BSD Rab3-GTPase_cat

Protein Analysis

705

Amino Acids

78.38

Weight (kDa)

5.1

Isoelectric Point (pI)

55.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rab3-GTPase_cat PF13890 382 - 532 1.7e-50 Rab3 GTPase-activating protein catalytic subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 119
AccI GTMKAC 1 cut(s) 1205
AccII CGCG 1 cut(s) 53
AciI CCGC 9 cut(s) 48, 51, 53, 62, 470, 718, 967, 1097, 1903
AclWI GGATC 1 cut(s) 127
AcoI YGGCCR 1 cut(s) 495
AcsI RAATTY 4 cut(s) 373, 559, 706, 946
AcuI CTGAAG 5 cut(s) 814, 834, 918, 1086, 1260
AcyI GRCGYC 1 cut(s) 116
AfaI GTAC 5 cut(s) 380, 912, 962, 1414, 1548
AfiI CCNNNNNNNGG 3 cut(s) 30, 215, 1002
AflII CTTAAG 1 cut(s) 839
AhdI GACNNNNNGTC 1 cut(s) 2017
AjnI CCWGG 3 cut(s) 995, 1345, 1981
AjuI GAANNNNNNNTTGG 2 cut(s) 527, 559
AloI GAACNNNNNNTCC 2 cut(s) 1125, 1157
Alw21I GWGCWC 1 cut(s) 784
Alw26I GTCTC 2 cut(s) 196, 599
AlwI GGATC 1 cut(s) 127
AlwNI CAGNNNCTG 1 cut(s) 1403
AoxI GGCC 5 cut(s) 333, 495, 1099, 1459, 1671
ApaI GGGCCC 1 cut(s) 1103
ApeKI GCWGC 5 cut(s) 449, 1094, 1337, 1627, 1846
ApoI RAATTY 4 cut(s) 373, 559, 706, 946
AseI ATTAAT 1 cut(s) 425
Asp700I GAANNNNTTC 3 cut(s) 426, 1137, 1581
AspS9I GGNCC 4 cut(s) 1099, 1100, 1226, 1960
AsuC2I CCSGG 2 cut(s) 123, 159
AsuHPI GGTGA 3 cut(s) 558, 1205, 1599
AsuII TTCGAA 1 cut(s) 1276
AvaII GGWCC 2 cut(s) 1226, 1960
BaeGI GKGCMC 1 cut(s) 1103
BalI TGGCCA 1 cut(s) 497
BanII GRGCYC 1 cut(s) 1103
BarI GAAGNNNNNNTAC 4 cut(s) 894, 926, 1215, 1247
BbsI GAAGAC 2 cut(s) 892, 2097
Bbv12I GWGCWC 1 cut(s) 784
BbvCI CCTCAGC 1 cut(s) 1668
BbvI GCAGC 5 cut(s) 436, 1081, 1324, 1639, 1858
BccI CCATC 4 cut(s) 649, 1368, 1427, 1583
BceAI ACGGC 2 cut(s) 768, 2062
BcgI CGANNNNNNTGC 2 cut(s) 77, 111
BciT130I CCWGG 3 cut(s) 997, 1347, 1983
BciVI GTATCC 3 cut(s) 31, 1507, 1744
BclI TGATCA 1 cut(s) 1248
BcnI CCSGG 2 cut(s) 123, 159
BcoDI GTCTC 2 cut(s) 196, 599
BfaI CTAG 4 cut(s) 915, 1031, 1878, 1956
BfmI CTRYAG 3 cut(s) 450, 600, 1083
BfrI CTTAAG 1 cut(s) 839
BfuI GTATCC 3 cut(s) 31, 1507, 1744
BglII AGATCT 3 cut(s) 538, 940, 1243
BisI GCNGC 8 cut(s) 51, 54, 450, 1095, 1338, 1628, 1847, 1904
BlpI GCTNAGC 2 cut(s) 445, 1404
BlsI GCNGC 8 cut(s) 52, 55, 451, 1096, 1339, 1629, 1848, 1905
Bme1390I CCNGG 5 cut(s) 123, 159, 997, 1347, 1983
Bme18I GGWCC 2 cut(s) 1226, 1960
BmeRI GACNNNNNGTC 1 cut(s) 2017
BmgT120I GGNCC 4 cut(s) 1099, 1100, 1226, 1960
BmiI GGNNCC 2 cut(s) 1101, 1961
BmrFI CCNGG 5 cut(s) 123, 159, 997, 1347, 1983
BmrI ACTGGG 1 cut(s) 1137
BmsI GCATC 3 cut(s) 557, 764, 2069
BmuI ACTGGG 1 cut(s) 1137
BoxI GACNNNNGTC 1 cut(s) 892
BpiI GAAGAC 2 cut(s) 892, 2097
BplI GAGNNNNNCTC 1 cut(s) 28
Bpu10I CCTNAGC 2 cut(s) 1668, 2046
Bpu1102I GCTNAGC 2 cut(s) 445, 1404
Bpu14I TTCGAA 1 cut(s) 1276
BpuMI CCSGG 2 cut(s) 123, 159
Bsa29I ATCGAT 1 cut(s) 726
BsaHI GRCGYC 1 cut(s) 116
BsaI GGTCTC 1 cut(s) 196
BsaJI CCNNGG 8 cut(s) 51, 122, 144, 158, 348, 750, 1416, 1981
BsaXI ACNNNNNCTCC 4 cut(s) 1125, 1155, 1855, 1885
Bsc4I CCNNNNNNNGG 3 cut(s) 30, 215, 1002
Bse1I ACTGG 7 cut(s) 569, 1053, 1132, 1140, 1195, 1397, 1526
BseBI CCWGG 3 cut(s) 997, 1347, 1983
BseCI ATCGAT 1 cut(s) 726
BseDI CCNNGG 8 cut(s) 51, 122, 144, 158, 348, 750, 1416, 1981
BseLI CCNNNNNNNGG 3 cut(s) 30, 215, 1002
BseMII CTCAG 6 cut(s) 447, 581, 1232, 1395, 1605, 1659
BseNI ACTGG 7 cut(s) 569, 1053, 1132, 1140, 1195, 1397, 1526
BseRI GAGGAG 4 cut(s) 774, 1277, 1301, 1374
BseSI GKGCMC 1 cut(s) 1103
BseXI GCAGC 5 cut(s) 436, 1081, 1324, 1639, 1858
Bsh1236I CGCG 1 cut(s) 53
Bsh1285I CGRYCG 1 cut(s) 97
BshFI GGCC 5 cut(s) 335, 497, 1101, 1461, 1673
BshVI ATCGAT 1 cut(s) 726
BsiEI CGRYCG 1 cut(s) 97
BsiHKAI GWGCWC 1 cut(s) 784
BsiSI CCGG 3 cut(s) 122, 158, 1850
BslFI GGGAC 2 cut(s) 232, 1973
BslI CCNNNNNNNGG 3 cut(s) 30, 215, 1002
BsmAI GTCTC 2 cut(s) 196, 599
BsmFI GGGAC 2 cut(s) 232, 1973
BsmI GAATGC 4 cut(s) 918, 1378, 1482, 1721
BsnI GGCC 5 cut(s) 335, 497, 1101, 1461, 1673
Bso31I GGTCTC 1 cut(s) 196
Bsp119I TTCGAA 1 cut(s) 1276
Bsp120I GGGCCC 1 cut(s) 1099
Bsp1286I GDGCHC 2 cut(s) 784, 1103
Bsp1407I TGTACA 1 cut(s) 378
Bsp143I GATC 8 cut(s) 94, 132, 538, 723, 940, 1156, 1243, 1248
Bsp1720I GCTNAGC 2 cut(s) 445, 1404
Bsp19I CCATGG 1 cut(s) 348
BspACI CCGC 9 cut(s) 48, 51, 53, 62, 470, 718, 967, 1097, 1903
BspANI GGCC 5 cut(s) 335, 497, 1101, 1461, 1673
BspCNI CTCAG 6 cut(s) 446, 582, 1231, 1396, 1606, 1660
BspDI ATCGAT 1 cut(s) 726
BspFNI CGCG 1 cut(s) 53
BspLI GGNNCC 2 cut(s) 1101, 1961
BspMAI CTGCAG 2 cut(s) 454, 604
BspPI GGATC 1 cut(s) 127
BspT104I TTCGAA 1 cut(s) 1276
BspTI CTTAAG 1 cut(s) 839
BspTNI GGTCTC 1 cut(s) 196
BsrGI TGTACA 1 cut(s) 378
BsrI ACTGG 7 cut(s) 569, 1053, 1132, 1140, 1195, 1397, 1526
BssECI CCNNGG 8 cut(s) 51, 122, 144, 158, 348, 750, 1416, 1981
BssMI GATC 8 cut(s) 94, 132, 538, 723, 940, 1156, 1243, 1248
BssNAI GTATAC 1 cut(s) 1206
BssNI GRCGYC 1 cut(s) 116
BssT1I CCWWGG 1 cut(s) 348
Bst1107I GTATAC 1 cut(s) 1206
Bst2UI CCWGG 3 cut(s) 997, 1347, 1983
Bst4CI ACNGT 6 cut(s) 855, 1169, 1798, 1861, 1938, 2107
BstACI GRCGYC 1 cut(s) 116
BstAFI CTTAAG 1 cut(s) 839
BstAUI TGTACA 1 cut(s) 378
BstBI TTCGAA 1 cut(s) 1276
BstC8I GCNNGC 4 cut(s) 141, 1099, 1326, 1489
BstDSI CCRYGG 3 cut(s) 51, 348, 750
BstEII GGTNACC 1 cut(s) 1169
BstFNI CGCG 1 cut(s) 53
BstKTI GATC 8 cut(s) 97, 135, 541, 726, 943, 1159, 1246, 1251
BstMAI GTCTC 2 cut(s) 196, 599
BstMBI GATC 8 cut(s) 94, 132, 538, 723, 940, 1156, 1243, 1248
BstMCI CGRYCG 1 cut(s) 97
BstNI CCWGG 3 cut(s) 997, 1347, 1983
BstNSI RCATGY 1 cut(s) 1324
BstPAI GACNNNNGTC 1 cut(s) 892
BstPI GGTNACC 1 cut(s) 1169
BstSCI CCNGG 5 cut(s) 121, 157, 995, 1345, 1981
BstSFI CTRYAG 3 cut(s) 450, 600, 1083
BstSLI GKGCMC 1 cut(s) 1103
BstUI CGCG 1 cut(s) 53
BstV1I GCAGC 5 cut(s) 436, 1081, 1324, 1639, 1858
BstV2I GAAGAC 2 cut(s) 892, 2097
BstX2I RGATCY 3 cut(s) 538, 940, 1243
BstYI RGATCY 3 cut(s) 538, 940, 1243
BstZ17I GTATAC 1 cut(s) 1206
Bsu15I ATCGAT 1 cut(s) 726
BsuI GTATCC 3 cut(s) 31, 1507, 1744
BsuRI GGCC 5 cut(s) 335, 497, 1101, 1461, 1673
BsuTUI ATCGAT 1 cut(s) 726
BtgI CCRYGG 3 cut(s) 51, 348, 750
BtsI GCAGTG 1 cut(s) 609
BtsIMutI CAGTG 4 cut(s) 609, 851, 1020, 1125
Cac8I GCNNGC 4 cut(s) 141, 1099, 1326, 1489
CaiI CAGNNNCTG 1 cut(s) 1403
Cfr13I GGNCC 4 cut(s) 1099, 1100, 1226, 1960
Cfr42I CCGCGG 1 cut(s) 54
ClaI ATCGAT 1 cut(s) 726
CseI GACGC 1 cut(s) 704
Csp6I GTAC 5 cut(s) 379, 911, 961, 1413, 1547
CspCI CAANNNNNGTGG 4 cut(s) 487, 522, 1903, 1938
CviAII CATG 5 cut(s) 179, 349, 391, 776, 1321
CviQI GTAC 5 cut(s) 379, 911, 961, 1413, 1547
DpnI GATC 8 cut(s) 96, 134, 540, 725, 942, 1158, 1245, 1250
DpnII GATC 8 cut(s) 94, 132, 538, 723, 940, 1156, 1243, 1248
DriI GACNNNNNGTC 1 cut(s) 2017
EaeI YGGCCR 1 cut(s) 495
Eam1105I GACNNNNNGTC 1 cut(s) 2017
EciI GGCGGA 3 cut(s) 37, 459, 733
Eco130I CCWWGG 1 cut(s) 348
Eco24I GRGCYC 1 cut(s) 1103
Eco31I GGTCTC 1 cut(s) 196
Eco47I GGWCC 2 cut(s) 1226, 1960
Eco57I CTGAAG 5 cut(s) 814, 834, 918, 1086, 1260
Eco91I GGTNACC 1 cut(s) 1169
EcoO109I RGGNCCY 2 cut(s) 1100, 1226
EcoO65I GGTNACC 1 cut(s) 1169
EcoRI GAATTC 1 cut(s) 946
EcoRII CCWGG 3 cut(s) 995, 1345, 1981
EcoT14I CCWWGG 1 cut(s) 348
EcoT38I GRGCYC 1 cut(s) 1103
ErhI CCWWGG 1 cut(s) 348
FaeI CATG 5 cut(s) 182, 352, 394, 779, 1324
FaqI GGGAC 2 cut(s) 232, 1973
FatI CATG 5 cut(s) 178, 348, 390, 775, 1320
FauI CCCGC 1 cut(s) 1090
FauNDI CATATG 1 cut(s) 907
FbaI TGATCA 1 cut(s) 1248
FblI GTMKAC 1 cut(s) 1205
Fnu4HI GCNGC 8 cut(s) 51, 54, 450, 1095, 1338, 1628, 1847, 1904
FriOI GRGCYC 1 cut(s) 1103
Fsp4HI GCNGC 8 cut(s) 51, 54, 450, 1095, 1338, 1628, 1847, 1904
FspBI CTAG 4 cut(s) 915, 1031, 1878, 1956
GluI GCNGC 8 cut(s) 51, 54, 450, 1095, 1338, 1628, 1847, 1904
HaeIII GGCC 5 cut(s) 335, 497, 1101, 1461, 1673
HapII CCGG 3 cut(s) 122, 158, 1850
HgaI GACGC 1 cut(s) 704
Hin1I GRCGYC 1 cut(s) 116
Hin1II CATG 5 cut(s) 182, 352, 394, 779, 1324
HindIII AAGCTT 1 cut(s) 442
HpaII CCGG 3 cut(s) 122, 158, 1850
HphI GGTGA 3 cut(s) 558, 1205, 1599
Hpy166II GTNNAC 5 cut(s) 1196, 1206, 1683, 1758, 1883
Hpy8I GTNNAC 5 cut(s) 1196, 1206, 1683, 1758, 1883
Hpy99I CGWCG 1 cut(s) 121
HpyAV CCTTC 9 cut(s) 25, 49, 325, 1217, 1571, 1620, 1759, 1878, 1884
HpyCH4III ACNGT 6 cut(s) 855, 1169, 1798, 1861, 1938, 2107
HpyCH4IV ACGT 2 cut(s) 116, 1443
HpyCH4V TGCA 8 cut(s) 452, 602, 973, 1324, 1340, 1480, 1719, 2060
HpySE526I ACGT 2 cut(s) 116, 1443
Hsp92I GRCGYC 1 cut(s) 116
Hsp92II CATG 5 cut(s) 182, 352, 394, 779, 1324
Ksp22I TGATCA 1 cut(s) 1248
KspI CCGCGG 1 cut(s) 54
Kzo9I GATC 8 cut(s) 94, 132, 538, 723, 940, 1156, 1243, 1248
LmnI GCTCC 3 cut(s) 64, 787, 825
Lsp1109I GCAGC 5 cut(s) 436, 1081, 1324, 1639, 1858
LweI GCATC 3 cut(s) 557, 764, 2069
MaeI CTAG 4 cut(s) 915, 1031, 1878, 1956
MaeII ACGT 2 cut(s) 116, 1443
MaeIII GTNAC 3 cut(s) 1169, 1213, 1861
MalI GATC 8 cut(s) 96, 134, 540, 725, 942, 1158, 1245, 1250
MboI GATC 8 cut(s) 94, 132, 538, 723, 940, 1156, 1243, 1248
MfeI CAATTG 2 cut(s) 491, 982
MflI RGATCY 3 cut(s) 538, 940, 1243
MhlI GDGCHC 2 cut(s) 784, 1103
MlsI TGGCCA 1 cut(s) 497
MluNI TGGCCA 1 cut(s) 497
MlyI GAGTC 3 cut(s) 14, 173, 601
MmeI TCCRAC 1 cut(s) 1164
Mox20I TGGCCA 1 cut(s) 497
MroXI GAANNNNTTC 3 cut(s) 426, 1137, 1581
MscI TGGCCA 1 cut(s) 497
MseI TTAA 4 cut(s) 425, 804, 840, 1466
MslI CAYNNNNRTG 1 cut(s) 923
Msp20I TGGCCA 1 cut(s) 497
MspA1I CMGCKG 4 cut(s) 53, 503, 967, 1630
MspCI CTTAAG 1 cut(s) 839
MspI CCGG 3 cut(s) 122, 158, 1850
MspR9I CCNGG 5 cut(s) 123, 159, 997, 1347, 1983
MunI CAATTG 2 cut(s) 491, 982
Mva1269I GAATGC 4 cut(s) 918, 1378, 1482, 1721
MvaI CCWGG 3 cut(s) 997, 1347, 1983
MvnI CGCG 1 cut(s) 53
NciI CCSGG 2 cut(s) 123, 159
NcoI CCATGG 1 cut(s) 348
NdeI CATATG 1 cut(s) 907
NdeII GATC 8 cut(s) 94, 132, 538, 723, 940, 1156, 1243, 1248
NlaIII CATG 5 cut(s) 182, 352, 394, 779, 1324
NlaIV GGNNCC 2 cut(s) 1101, 1961
NmeAIII GCCGAG 2 cut(s) 169, 361
NmuCI GTSAC 1 cut(s) 1861
NspI RCATGY 1 cut(s) 1324
NspV TTCGAA 1 cut(s) 1276
PctI GAATGC 4 cut(s) 918, 1378, 1482, 1721
PdmI GAANNNNTTC 3 cut(s) 426, 1137, 1581
PfeI GAWTC 9 cut(s) 104, 152, 182, 466, 679, 728, 934, 1070, 1424
PfoI TCCNGGA 1 cut(s) 995
PkrI GCNGC 8 cut(s) 52, 55, 451, 1096, 1339, 1629, 1848, 1905
Ple19I CGATCG 1 cut(s) 97
PleI GAGTC 3 cut(s) 13, 172, 600
PpsI GAGTC 3 cut(s) 13, 172, 600
PpuMI RGGWCCY 1 cut(s) 1226
PshAI GACNNNNGTC 1 cut(s) 892
PshBI ATTAAT 1 cut(s) 425
Psp5II RGGWCCY 1 cut(s) 1226
Psp6I CCWGG 3 cut(s) 995, 1345, 1981
PspEI GGTNACC 1 cut(s) 1169
PspGI CCWGG 3 cut(s) 995, 1345, 1981
PspN4I GGNNCC 2 cut(s) 1101, 1961
PspOMI GGGCCC 1 cut(s) 1099
PspPI GGNCC 4 cut(s) 1099, 1100, 1226, 1960
PspPPI RGGWCCY 1 cut(s) 1226
PstI CTGCAG 2 cut(s) 454, 604
PstNI CAGNNNCTG 1 cut(s) 1403
PsuI RGATCY 3 cut(s) 538, 940, 1243
PvuI CGATCG 1 cut(s) 97
PvuII CAGCTG 2 cut(s) 503, 1630
RsaI GTAC 5 cut(s) 380, 912, 962, 1414, 1548
RsaNI GTAC 5 cut(s) 379, 911, 961, 1413, 1547
RseI CAYNNNNRTG 1 cut(s) 923
SacII CCGCGG 1 cut(s) 54
SaqAI TTAA 4 cut(s) 425, 804, 840, 1466
SatI GCNGC 8 cut(s) 51, 54, 450, 1095, 1338, 1628, 1847, 1904
Sau3AI GATC 8 cut(s) 94, 132, 538, 723, 940, 1156, 1243, 1248
Sau96I GGNCC 4 cut(s) 1099, 1100, 1226, 1960
SchI GAGTC 3 cut(s) 14, 173, 601
ScrFI CCNGG 5 cut(s) 123, 159, 997, 1347, 1983
SduI GDGCHC 2 cut(s) 784, 1103
SfaNI GCATC 3 cut(s) 557, 764, 2069
SfcI CTRYAG 3 cut(s) 450, 600, 1083
Sfr303I CCGCGG 1 cut(s) 54
SfuI TTCGAA 1 cut(s) 1276
SgrBI CCGCGG 1 cut(s) 54
SinI GGWCC 2 cut(s) 1226, 1960
SmiMI CAYNNNNRTG 1 cut(s) 923
SmlI CTYRAG 1 cut(s) 839
SmoI CTYRAG 1 cut(s) 839
SsiI CCGC 9 cut(s) 48, 51, 53, 62, 470, 718, 967, 1097, 1903
SspI AATATT 1 cut(s) 295
SspMI CTAG 4 cut(s) 915, 1031, 1878, 1956
StyD4I CCNGG 5 cut(s) 121, 157, 995, 1345, 1981
StyI CCWWGG 1 cut(s) 348
TaaI ACNGT 6 cut(s) 855, 1169, 1798, 1861, 1938, 2107
TaiI ACGT 2 cut(s) 119, 1446
TaqI TCGA 4 cut(s) 167, 726, 1117, 1276
TatI WGTACW 1 cut(s) 378
TauI GCSGC 3 cut(s) 53, 56, 1906
TfiI GAWTC 9 cut(s) 104, 152, 182, 466, 679, 728, 934, 1070, 1424
Tru1I TTAA 4 cut(s) 425, 804, 840, 1466
Tru9I TTAA 4 cut(s) 425, 804, 840, 1466
TscAI CASTG 4 cut(s) 609, 858, 1027, 1132
TseFI GTSAC 1 cut(s) 1861
TseI GCWGC 5 cut(s) 449, 1094, 1337, 1627, 1846
Tsp45I GTSAC 1 cut(s) 1861
TspDTI ATGAA 9 cut(s) 165, 195, 384, 407, 548, 648, 764, 1728, 1856
TspGWI ACGGA 1 cut(s) 1066
TspRI CASTG 4 cut(s) 609, 858, 1027, 1132
Vha464I CTTAAG 1 cut(s) 839
VpaK11BI GGWCC 2 cut(s) 1226, 1960
VspI ATTAAT 1 cut(s) 425
XapI RAATTY 4 cut(s) 373, 559, 706, 946
XceI RCATGY 1 cut(s) 1324
XmiI GTMKAC 1 cut(s) 1205
XmnI GAANNNNTTC 3 cut(s) 426, 1137, 1581
XspI CTAG 4 cut(s) 915, 1031, 1878, 1956
ZraI GACGTC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.