Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010369.1

Orthogroup ID

OG0004994

Physical Location & Seq

Genomic Coordinates Reverse (-)

41566 .. 46726

Gene Structure 5161 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010369.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

atggagtccccctccttcgtatccaaagcaaggacagccttccattccgccgcggctaaagcggagcgagttctctctgacttgaagcaacccgatcgcccagattccgataggacgtcgccgaggattttgatccagcaagccgaggatgaatcgccgggggagtccaggggtttccatgaatcaaaggctttgaggtggagacctccgaatatagggacaaagcaggaatggcaggacaggaagcaagaatggcaggataagttgaggaatattggaaaaggaaagaaaggagttgaagatacagagaaggccgagtattcgtccatggctgttccttattatgatgaaaatttgtacattctgaacatgaaaaatgatatggaagcaaagggggcagaattaattccctcagttgaaagctttgctgcggacaacatagtgattccgccattatctgttatgaggcaattggccacagctgttgaggctggaaagaagtctaaatcaatgaaagatcttttggcatcatcaggaaattcctcaccagtcagagagagggggggtctgagtctctctgctgtgaagtcattagtgcttcgtgaaaaggaggaaaagccatctgattttggtcataatgagaaagtcctatcattgattcactgtctatttgatgcagagggaaattttctaaggcggaagatcaattctggttcagacacgattaccatggcatctataccaaaagatattcatggtgctcctcctgaaagccttgtagttaagttagctgaagtcattgggagcttcagaacccttaagaaaatgacactgttttggtgtagtgttgtttccgaacttagaagactttggtctgaagaagcatatgtacctagcattcctgtggatgagattccagatctgaattcttgtcttttgtaccagcggttgcaagttatcaattgttgtgtttccaggaaaaggcgacgtgatattgccactgaaacactagagtttgtaattagagaagccagtccaaacgctgaagaattatccgtttctacagacaatgctgcgggccctgttttgtatgctcgaataagcactggggaactggttctccgattaggtgctgatcgcccatacggtaacctaaaaatgttggaaactggtgaacctatgtatacccctgtaactcaggaaggacctttacttactgaagatctgatcaaggaaacagaggagtttgtgcttcgaacaggaagtgttggtgctggatgttctcaactcctctctgacatgcaggctttcaaggctgcaaatcctggttgtattttggaagattttgttagatggcattctcctcctgactggacagaggctgagccaagtaccgaggctgaatctctggatggtaatgacgtatcatccgcaagaggccaattaagtagccgaatgcaaaaagcaggcaatctctggcatgagctgtgggatacatccaaaccagttccagcagtaaaacaagtacccctctttgacgaggacttagctgtggaaggtattctggatggttttgaggacatatcaccttctgagctttttgagcagctgtttatttctttgcttggtttagggtttgtaattgctgaggccaaattgtccactaacagcgatttttcaaagctgttctatgaatgcaaggactttgtggtatccacttgtcaaggcaaaatgtggacagagaaggttgacgagctttgtcaggtatttgaaacagttgaggctatgatactcaatccagaggaagtcctaagaataatgaagcagccggaagaaaccatgaccccttctccttctagtgaaccaaaaagtcgtttcaggcggctgaccctcaacttcggtggcaaagatagacagttgaaaaaatcagcttctaaggaccagaagaactcacaaagccctggtagccaaccattttcaagtttctttgacaacaagtcatcattattttcaaaaaagcctcctaagcctgaaaatgcatcccctgttgaaaaaccgtcaattacagaagacaatgattggacagttgtttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BSD Rab3-GTPase_cat

Protein Analysis

697

Amino Acids

77.68

Weight (kDa)

5.19

Isoelectric Point (pI)

54.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004994)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55060 AT5G55060 AT5G55060
fragaria_vesca	FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020 FvH4_3g23020
malus_domestica	MD03G1198400.v1.1 MD11G1214500.v1.1
prunus_persica	Prupe.4G216600_v2.0.a1 Prupe.4G216600_v2.0.a1
pyrus_communis	pycom03g15000 pycom11g18890
rosa_chinensis	RchiOBHm_Chr5g0040501
rosa_laevigata	RLG00000033984
rosa_multiflora	Rmu_sc0010369.1_g000012
rosa_roxburghii	Rroxscaffold_1G00040150 Rroxscaffold_1G00040880
rosa_rugosa	Rorug05G0185300
rosa_samantha	Rh5BG276200 Rh5CG309100 Rh5DG284700
rosa_wichuraiana	Rw5G015460 Rw5G025490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	119
AccI	GTMKAC	1 cut(s)	1184
AccII	CGCG	1 cut(s)	53
AclWI	GGATC	1 cut(s)	127
AcoI	YGGCCR	1 cut(s)	474
AcsI	RAATTY	4 cut(s)	352, 538, 685, 925
AcuI	CTGAAG	5 cut(s)	793, 813, 897, 1065, 1239
AcyI	GRCGYC	1 cut(s)	116
AfaI	GTAC	5 cut(s)	359, 891, 941, 1393, 1527
AfiI	CCNNNNNNNGG	3 cut(s)	30, 215, 981
AflII	CTTAAG	1 cut(s)	818
AhdI	GACNNNNNGTC	1 cut(s)	1996
AjiI	CACGTC	1 cut(s)	989
AjnI	CCWGG	4 cut(s)	167, 974, 1324, 1960
AjuI	GAANNNNNNNTTGG	2 cut(s)	506, 538
AloI	GAACNNNNNNTCC	2 cut(s)	1104, 1136
Alw21I	GWGCWC	1 cut(s)	763
Alw26I	GTCTC	2 cut(s)	196, 578
AlwI	GGATC	1 cut(s)	127
AlwNI	CAGNNNCTG	1 cut(s)	1382
AoxI	GGCC	5 cut(s)	312, 474, 1078, 1438, 1650
ApaI	GGGCCC	1 cut(s)	1082
ApeKI	GCWGC	5 cut(s)	428, 1073, 1316, 1606, 1825
ApoI	RAATTY	4 cut(s)	352, 538, 685, 925
AseI	ATTAAT	1 cut(s)	404
Asp700I	GAANNNNTTC	3 cut(s)	405, 1116, 1560
AspS9I	GGNCC	4 cut(s)	1078, 1079, 1205, 1939
AsuC2I	CCSGG	1 cut(s)	159
AsuHPI	GGTGA	3 cut(s)	537, 1184, 1578
AsuII	TTCGAA	1 cut(s)	1255
AvaII	GGWCC	2 cut(s)	1205, 1939
BaeGI	GKGCMC	1 cut(s)	1082
BalI	TGGCCA	1 cut(s)	476
BanII	GRGCYC	1 cut(s)	1082
BarI	GAAGNNNNNNTAC	4 cut(s)	873, 905, 1194, 1226
BbsI	GAAGAC	2 cut(s)	871, 2076
Bbv12I	GWGCWC	1 cut(s)	763
BbvCI	CCTCAGC	1 cut(s)	1647
BbvI	GCAGC	5 cut(s)	415, 1060, 1303, 1618, 1837
BccI	CCATC	4 cut(s)	628, 1347, 1406, 1562
BcgI	CGANNNNNNTGC	2 cut(s)	77, 111
BciT130I	CCWGG	4 cut(s)	169, 976, 1326, 1962
BciVI	GTATCC	3 cut(s)	31, 1486, 1723
BclI	TGATCA	1 cut(s)	1227
BcnI	CCSGG	1 cut(s)	159
BcoDI	GTCTC	2 cut(s)	196, 578
BfaI	CTAG	3 cut(s)	894, 1010, 1857
BfmI	CTRYAG	1 cut(s)	1062
BfrI	CTTAAG	1 cut(s)	818
BfuI	GTATCC	3 cut(s)	31, 1486, 1723
BglII	AGATCT	3 cut(s)	517, 919, 1222
BisI	GCNGC	8 cut(s)	51, 54, 429, 1074, 1317, 1607, 1826, 1883
BlpI	GCTNAGC	1 cut(s)	1383
BlsI	GCNGC	8 cut(s)	52, 55, 430, 1075, 1318, 1608, 1827, 1884
Bme1390I	CCNGG	5 cut(s)	159, 169, 976, 1326, 1962
Bme18I	GGWCC	2 cut(s)	1205, 1939
BmeRI	GACNNNNNGTC	1 cut(s)	1996
BmgBI	CACGTC	1 cut(s)	989
BmgT120I	GGNCC	4 cut(s)	1078, 1079, 1205, 1939
BmiI	GGNNCC	1 cut(s)	1080
BmrFI	CCNGG	5 cut(s)	159, 169, 976, 1326, 1962
BmrI	ACTGGG	1 cut(s)	1116
BmsI	GCATC	4 cut(s)	536, 664, 743, 2048
BmuI	ACTGGG	1 cut(s)	1116
BoxI	GACNNNNGTC	1 cut(s)	871
BpiI	GAAGAC	2 cut(s)	871, 2076
BplI	GAGNNNNNCTC	1 cut(s)	28
Bpu10I	CCTNAGC	2 cut(s)	1647, 2025
Bpu1102I	GCTNAGC	1 cut(s)	1383
Bpu14I	TTCGAA	1 cut(s)	1255
BpuMI	CCSGG	1 cut(s)	159
BsaBI	GATNNNNATC	1 cut(s)	131
BsaHI	GRCGYC	1 cut(s)	116
BsaI	GGTCTC	1 cut(s)	196
BsaJI	CCNNGG	9 cut(s)	51, 122, 144, 158, 168, 327, 729, 1395, 1960
BsaXI	ACNNNNNCTCC	4 cut(s)	1104, 1134, 1834, 1864
Bsc4I	CCNNNNNNNGG	3 cut(s)	30, 215, 981
Bse1I	ACTGG	7 cut(s)	548, 1032, 1111, 1119, 1174, 1376, 1505
Bse8I	GATNNNNATC	1 cut(s)	131
BseBI	CCWGG	4 cut(s)	169, 976, 1326, 1962
BseDI	CCNNGG	9 cut(s)	51, 122, 144, 158, 168, 327, 729, 1395, 1960
BseGI	GGATG	8 cut(s)	154, 913, 1283, 1417, 1427, 1496, 1573, 2039
BseJI	GATNNNNATC	1 cut(s)	131
BseLI	CCNNNNNNNGG	3 cut(s)	30, 215, 981
BseMII	CTCAG	6 cut(s)	426, 560, 1211, 1374, 1584, 1638
BseNI	ACTGG	7 cut(s)	548, 1032, 1111, 1119, 1174, 1376, 1505
BseRI	GAGGAG	4 cut(s)	753, 1256, 1280, 1353
BseSI	GKGCMC	1 cut(s)	1082
BseXI	GCAGC	5 cut(s)	415, 1060, 1303, 1618, 1837
Bsh1236I	CGCG	1 cut(s)	53
Bsh1285I	CGRYCG	1 cut(s)	97
BshFI	GGCC	5 cut(s)	314, 476, 1080, 1440, 1652
BsiEI	CGRYCG	1 cut(s)	97
BsiHKAI	GWGCWC	1 cut(s)	763
BsiSI	CCGG	2 cut(s)	158, 1829
BslFI	GGGAC	1 cut(s)	232
BslI	CCNNNNNNNGG	3 cut(s)	30, 215, 981
BsmAI	GTCTC	2 cut(s)	196, 578
BsmFI	GGGAC	1 cut(s)	232
BsmI	GAATGC	4 cut(s)	897, 1357, 1461, 1700
BsnI	GGCC	5 cut(s)	314, 476, 1080, 1440, 1652
Bso31I	GGTCTC	1 cut(s)	196
Bsp119I	TTCGAA	1 cut(s)	1255
Bsp120I	GGGCCC	1 cut(s)	1078
Bsp1286I	GDGCHC	2 cut(s)	763, 1082
Bsp1407I	TGTACA	1 cut(s)	357
Bsp143I	GATC	8 cut(s)	94, 132, 517, 702, 919, 1135, 1222, 1227
Bsp1720I	GCTNAGC	1 cut(s)	1383
Bsp19I	CCATGG	2 cut(s)	327, 729
BspANI	GGCC	5 cut(s)	314, 476, 1080, 1440, 1652
BspCNI	CTCAG	6 cut(s)	425, 561, 1210, 1375, 1585, 1639
BspFNI	CGCG	1 cut(s)	53
BspLI	GGNNCC	1 cut(s)	1080
BspPI	GGATC	1 cut(s)	127
BspT104I	TTCGAA	1 cut(s)	1255
BspTI	CTTAAG	1 cut(s)	818
BspTNI	GGTCTC	1 cut(s)	196
BsrGI	TGTACA	1 cut(s)	357
BsrI	ACTGG	7 cut(s)	548, 1032, 1111, 1119, 1174, 1376, 1505
BssECI	CCNNGG	9 cut(s)	51, 122, 144, 158, 168, 327, 729, 1395, 1960
BssMI	GATC	8 cut(s)	94, 132, 517, 702, 919, 1135, 1222, 1227
BssNAI	GTATAC	1 cut(s)	1185
BssNI	GRCGYC	1 cut(s)	116
BssT1I	CCWWGG	2 cut(s)	327, 729
Bst1107I	GTATAC	1 cut(s)	1185
Bst2UI	CCWGG	4 cut(s)	169, 976, 1326, 1962
Bst4CI	ACNGT	7 cut(s)	665, 834, 1148, 1777, 1917, 2058, 2086
BstACI	GRCGYC	1 cut(s)	116
BstAFI	CTTAAG	1 cut(s)	818
BstAUI	TGTACA	1 cut(s)	357
BstBI	TTCGAA	1 cut(s)	1255
BstC8I	GCNNGC	4 cut(s)	141, 1078, 1305, 1468
BstDSI	CCRYGG	3 cut(s)	51, 327, 729
BstEII	GGTNACC	1 cut(s)	1148
BstF5I	GGATG	8 cut(s)	154, 913, 1283, 1417, 1427, 1496, 1573, 2039
BstFNI	CGCG	1 cut(s)	53
BstKTI	GATC	8 cut(s)	97, 135, 520, 705, 922, 1138, 1225, 1230
BstMAI	GTCTC	2 cut(s)	196, 578
BstMBI	GATC	8 cut(s)	94, 132, 517, 702, 919, 1135, 1222, 1227
BstMCI	CGRYCG	1 cut(s)	97
BstNI	CCWGG	4 cut(s)	169, 976, 1326, 1962
BstNSI	RCATGY	1 cut(s)	1303
BstPAI	GACNNNNGTC	1 cut(s)	871
BstPI	GGTNACC	1 cut(s)	1148
BstSCI	CCNGG	5 cut(s)	157, 167, 974, 1324, 1960
BstSFI	CTRYAG	1 cut(s)	1062
BstSLI	GKGCMC	1 cut(s)	1082
BstUI	CGCG	1 cut(s)	53
BstV1I	GCAGC	5 cut(s)	415, 1060, 1303, 1618, 1837
BstV2I	GAAGAC	2 cut(s)	871, 2076
BstX2I	RGATCY	3 cut(s)	517, 919, 1222
BstYI	RGATCY	3 cut(s)	517, 919, 1222
BstZ17I	GTATAC	1 cut(s)	1185
BsuI	GTATCC	3 cut(s)	31, 1486, 1723
BsuRI	GGCC	5 cut(s)	314, 476, 1080, 1440, 1652
BtgI	CCRYGG	3 cut(s)	51, 327, 729
BtrI	CACGTC	1 cut(s)	989
BtsCI	GGATG	8 cut(s)	154, 913, 1283, 1417, 1427, 1496, 1573, 2039
BtsIMutI	CAGTG	4 cut(s)	661, 830, 999, 1104
Cac8I	GCNNGC	4 cut(s)	141, 1078, 1305, 1468
CaiI	CAGNNNCTG	1 cut(s)	1382
Cfr13I	GGNCC	4 cut(s)	1078, 1079, 1205, 1939
Cfr42I	CCGCGG	1 cut(s)	54
Csp6I	GTAC	5 cut(s)	358, 890, 940, 1392, 1526
CspCI	CAANNNNNGTGG	4 cut(s)	466, 501, 1882, 1917
CviAII	CATG	8 cut(s)	179, 328, 370, 730, 755, 1300, 1481, 1840
CviQI	GTAC	5 cut(s)	358, 890, 940, 1392, 1526
DpnI	GATC	8 cut(s)	96, 134, 519, 704, 921, 1137, 1224, 1229
DpnII	GATC	8 cut(s)	94, 132, 517, 702, 919, 1135, 1222, 1227
DriI	GACNNNNNGTC	1 cut(s)	1996
EaeI	YGGCCR	1 cut(s)	474
Eam1105I	GACNNNNNGTC	1 cut(s)	1996
EciI	GGCGGA	3 cut(s)	37, 438, 712
Eco130I	CCWWGG	2 cut(s)	327, 729
Eco24I	GRGCYC	1 cut(s)	1082
Eco31I	GGTCTC	1 cut(s)	196
Eco47I	GGWCC	2 cut(s)	1205, 1939
Eco57I	CTGAAG	5 cut(s)	793, 813, 897, 1065, 1239
Eco91I	GGTNACC	1 cut(s)	1148
EcoO109I	RGGNCCY	2 cut(s)	1079, 1205
EcoO65I	GGTNACC	1 cut(s)	1148
EcoRI	GAATTC	1 cut(s)	925
EcoRII	CCWGG	4 cut(s)	167, 974, 1324, 1960
EcoT14I	CCWWGG	2 cut(s)	327, 729
EcoT22I	ATGCAT	1 cut(s)	2041
EcoT38I	GRGCYC	1 cut(s)	1082
ErhI	CCWWGG	2 cut(s)	327, 729
FaeI	CATG	8 cut(s)	182, 331, 373, 733, 758, 1303, 1484, 1843
FaqI	GGGAC	1 cut(s)	232
FatI	CATG	8 cut(s)	178, 327, 369, 729, 754, 1299, 1480, 1839
FauI	CCCGC	1 cut(s)	1069
FauNDI	CATATG	1 cut(s)	886
FbaI	TGATCA	1 cut(s)	1227
FblI	GTMKAC	1 cut(s)	1184
Fnu4HI	GCNGC	8 cut(s)	51, 54, 429, 1074, 1317, 1607, 1826, 1883
FokI	GGATG	8 cut(s)	161, 920, 1290, 1414, 1424, 1483, 1580, 2026
FriOI	GRGCYC	1 cut(s)	1082
Fsp4HI	GCNGC	8 cut(s)	51, 54, 429, 1074, 1317, 1607, 1826, 1883
FspBI	CTAG	3 cut(s)	894, 1010, 1857
GluI	GCNGC	8 cut(s)	51, 54, 429, 1074, 1317, 1607, 1826, 1883
HaeIII	GGCC	5 cut(s)	314, 476, 1080, 1440, 1652
HapII	CCGG	2 cut(s)	158, 1829
Hin1I	GRCGYC	1 cut(s)	116
Hin1II	CATG	8 cut(s)	182, 331, 373, 733, 758, 1303, 1484, 1843
HincII	GTYRAC	1 cut(s)	1750
HindII	GTYRAC	1 cut(s)	1750
HindIII	AAGCTT	1 cut(s)	421
HpaII	CCGG	2 cut(s)	158, 1829
HphI	GGTGA	3 cut(s)	537, 1184, 1578
Hpy166II	GTNNAC	6 cut(s)	1175, 1185, 1662, 1737, 1750, 1862
Hpy188III	TCNNGA	9 cut(s)	534, 602, 767, 917, 1199, 1367, 1409, 1565, 1799
Hpy8I	GTNNAC	6 cut(s)	1175, 1185, 1662, 1737, 1750, 1862
Hpy99I	CGWCG	2 cut(s)	121, 990
HpyAV	CCTTC	9 cut(s)	25, 49, 304, 1196, 1550, 1599, 1738, 1857, 1863
HpyCH4III	ACNGT	7 cut(s)	665, 834, 1148, 1777, 1917, 2058, 2086
HpyCH4IV	ACGT	3 cut(s)	116, 988, 1422
HpyCH4V	TGCA	7 cut(s)	677, 952, 1303, 1319, 1459, 1698, 2039
HpySE526I	ACGT	3 cut(s)	116, 988, 1422
Hsp92I	GRCGYC	1 cut(s)	116
Hsp92II	CATG	8 cut(s)	182, 331, 373, 733, 758, 1303, 1484, 1843
Ksp22I	TGATCA	1 cut(s)	1227
KspI	CCGCGG	1 cut(s)	54
Kzo9I	GATC	8 cut(s)	94, 132, 517, 702, 919, 1135, 1222, 1227
LmnI	GCTCC	3 cut(s)	64, 766, 804
Lsp1109I	GCAGC	5 cut(s)	415, 1060, 1303, 1618, 1837
LweI	GCATC	4 cut(s)	536, 664, 743, 2048
MaeI	CTAG	3 cut(s)	894, 1010, 1857
MaeII	ACGT	3 cut(s)	116, 988, 1422
MaeIII	GTNAC	2 cut(s)	1148, 1192
MalI	GATC	8 cut(s)	96, 134, 519, 704, 921, 1137, 1224, 1229
MboI	GATC	8 cut(s)	94, 132, 517, 702, 919, 1135, 1222, 1227
MfeI	CAATTG	2 cut(s)	470, 961
MflI	RGATCY	3 cut(s)	517, 919, 1222
MhlI	GDGCHC	2 cut(s)	763, 1082
MlsI	TGGCCA	1 cut(s)	476
MluNI	TGGCCA	1 cut(s)	476
MlyI	GAGTC	3 cut(s)	14, 173, 580
MmeI	TCCRAC	1 cut(s)	1143
Mox20I	TGGCCA	1 cut(s)	476
Mph1103I	ATGCAT	1 cut(s)	2041
MroXI	GAANNNNTTC	3 cut(s)	405, 1116, 1560
MscI	TGGCCA	1 cut(s)	476
MseI	TTAA	4 cut(s)	404, 783, 819, 1445
MslI	CAYNNNNRTG	1 cut(s)	902
Msp20I	TGGCCA	1 cut(s)	476
MspA1I	CMGCKG	4 cut(s)	53, 482, 946, 1609
MspCI	CTTAAG	1 cut(s)	818
MspI	CCGG	2 cut(s)	158, 1829
MspR9I	CCNGG	5 cut(s)	159, 169, 976, 1326, 1962
MunI	CAATTG	2 cut(s)	470, 961
Mva1269I	GAATGC	4 cut(s)	897, 1357, 1461, 1700
MvaI	CCWGG	4 cut(s)	169, 976, 1326, 1962
MvnI	CGCG	1 cut(s)	53
NciI	CCSGG	1 cut(s)	159
NcoI	CCATGG	2 cut(s)	327, 729
NdeI	CATATG	1 cut(s)	886
NdeII	GATC	8 cut(s)	94, 132, 517, 702, 919, 1135, 1222, 1227
NlaIII	CATG	8 cut(s)	182, 331, 373, 733, 758, 1303, 1484, 1843
NlaIV	GGNNCC	1 cut(s)	1080
NmeAIII	GCCGAG	3 cut(s)	147, 169, 340
NsiI	ATGCAT	1 cut(s)	2041
NspI	RCATGY	1 cut(s)	1303
NspV	TTCGAA	1 cut(s)	1255
PctI	GAATGC	4 cut(s)	897, 1357, 1461, 1700
PdmI	GAANNNNTTC	3 cut(s)	405, 1116, 1560
PfeI	GAWTC	7 cut(s)	104, 152, 182, 445, 658, 913, 1403
PfoI	TCCNGGA	1 cut(s)	974
PkrI	GCNGC	8 cut(s)	52, 55, 430, 1075, 1318, 1608, 1827, 1884
Ple19I	CGATCG	1 cut(s)	97
PleI	GAGTC	3 cut(s)	13, 172, 579
PpsI	GAGTC	3 cut(s)	13, 172, 579
PpuMI	RGGWCCY	1 cut(s)	1205
PshAI	GACNNNNGTC	1 cut(s)	871
PshBI	ATTAAT	1 cut(s)	404
Psp5II	RGGWCCY	1 cut(s)	1205
Psp6I	CCWGG	4 cut(s)	167, 974, 1324, 1960
PspEI	GGTNACC	1 cut(s)	1148
PspGI	CCWGG	4 cut(s)	167, 974, 1324, 1960
PspN4I	GGNNCC	1 cut(s)	1080
PspOMI	GGGCCC	1 cut(s)	1078
PspPI	GGNCC	4 cut(s)	1078, 1079, 1205, 1939
PspPPI	RGGWCCY	1 cut(s)	1205
PstNI	CAGNNNCTG	1 cut(s)	1382
PsuI	RGATCY	3 cut(s)	517, 919, 1222
PvuI	CGATCG	1 cut(s)	97
PvuII	CAGCTG	2 cut(s)	482, 1609
RsaI	GTAC	5 cut(s)	359, 891, 941, 1393, 1527
RsaNI	GTAC	5 cut(s)	358, 890, 940, 1392, 1526
RseI	CAYNNNNRTG	1 cut(s)	902
SacII	CCGCGG	1 cut(s)	54
SaqAI	TTAA	4 cut(s)	404, 783, 819, 1445
SatI	GCNGC	8 cut(s)	51, 54, 429, 1074, 1317, 1607, 1826, 1883
Sau3AI	GATC	8 cut(s)	94, 132, 517, 702, 919, 1135, 1222, 1227
Sau96I	GGNCC	4 cut(s)	1078, 1079, 1205, 1939
SchI	GAGTC	3 cut(s)	14, 173, 580
ScrFI	CCNGG	5 cut(s)	159, 169, 976, 1326, 1962
SduI	GDGCHC	2 cut(s)	763, 1082
SfaNI	GCATC	4 cut(s)	536, 664, 743, 2048
SfcI	CTRYAG	1 cut(s)	1062
Sfr303I	CCGCGG	1 cut(s)	54
SfuI	TTCGAA	1 cut(s)	1255
SgrBI	CCGCGG	1 cut(s)	54
SinI	GGWCC	2 cut(s)	1205, 1939
SmiMI	CAYNNNNRTG	1 cut(s)	902
SmlI	CTYRAG	1 cut(s)	818
SmoI	CTYRAG	1 cut(s)	818
SspI	AATATT	1 cut(s)	274
SspMI	CTAG	3 cut(s)	894, 1010, 1857
StyD4I	CCNGG	5 cut(s)	157, 167, 974, 1324, 1960
StyI	CCWWGG	2 cut(s)	327, 729
TaaI	ACNGT	7 cut(s)	665, 834, 1148, 1777, 1917, 2058, 2086
TaiI	ACGT	3 cut(s)	119, 991, 1425
TaqI	TCGA	2 cut(s)	1096, 1255
TatI	WGTACW	1 cut(s)	357
TauI	GCSGC	3 cut(s)	53, 56, 1885
TfiI	GAWTC	7 cut(s)	104, 152, 182, 445, 658, 913, 1403
Tru1I	TTAA	4 cut(s)	404, 783, 819, 1445
Tru9I	TTAA	4 cut(s)	404, 783, 819, 1445
TscAI	CASTG	4 cut(s)	668, 837, 1006, 1111
TseI	GCWGC	5 cut(s)	428, 1073, 1316, 1606, 1825
TspDTI	ATGAA	8 cut(s)	165, 195, 363, 386, 527, 743, 1707, 1835
TspGWI	ACGGA	1 cut(s)	1045
TspRI	CASTG	4 cut(s)	668, 837, 1006, 1111
Vha464I	CTTAAG	1 cut(s)	818
VpaK11BI	GGWCC	2 cut(s)	1205, 1939
VspI	ATTAAT	1 cut(s)	404
XapI	RAATTY	4 cut(s)	352, 538, 685, 925
XceI	RCATGY	1 cut(s)	1303
XmiI	GTMKAC	1 cut(s)	1184
XmnI	GAANNNNTTC	3 cut(s)	405, 1116, 1560
XspI	CTAG	3 cut(s)	894, 1010, 1857
ZraI	GACGTC	1 cut(s)	117
Zsp2I	ATGCAT	1 cut(s)	2041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.