Rh5DG284700

Rab3 GTPase-activating protein catalytic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0004994
Physical Location & Seq
Forward (+)
35239308 .. 35245716
6409 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG284700.1

Sequence Viewer

Length: 2274 bp
ATGGAGTCCCCCTCCTTCGTATCCAAAGCAAGGACAGCCTTCCATTCCGCCGCGGCTAAAGCGGAGCGAGTTCTCTCTGACTTGAAGCAACCCGATCGCCCAGGTCACCCTTTTTTTCTTCTCTCTATTTCAAATTTAGTCTCCTCCAATTTCAGTTGCCCTTTTACTGCCTCAGACTTGCATTTGACTTTTCCCCTATATATCCTATTTTTCGTTTTGCGGAGATTTAAATTACTCCAATTTTTGGTTTTTTTTTTTGGTGAATTTTTTGTTTTGATCGGTGTAGATTCCGATAGGACGTCGCCGAGGATTTTGATCCAGCAAGCCGAGGATGAATCGCCGGGGGAGTCCAGGGGTTTCCATGAATCAAAGGCTTTGAGGTGGAGACCTCCGAATATAGGGACAAAGCAGGAATGGCAGGACAGGAAGCAAGAATGGCAGGATAAGTTGAGGAATATTGGAAAAGGAAAGAAAGGAGTTGAAGATACAGAGAAGGCCGAGTATTCGTCCATGGCTGTTCCTTATTATGATGAAAATTTGTACATTCTGAACATGAAAAATGATATGGAAGCAAAGGGGGCAGAATTAATTCCCTCAGTTGAAAGCTTAGCTGCGGACAACATAGTGATTCCGCCATTATCTGTTATGAGGCAATTGGCCACAGCTGTTGAGGCTGGAAAGAAGTCTAAATCAATGAAAGATCTTTTGGCATCATCAGGAAATTCCTCACCAGTCAGAGAGAGGGGGGGTCTGAGTCTCTCTGCTGTGAAGTCATTAGTGCTTCGTGAAAAGGAGGAAAAGCTATCTGATTTTGGTCATAATGAGAAAGTCCTATCATTGATTCACTCTCTATTTGATGCAGAGGGAAATTTTCTAAGGCGGAAGATCGATTCTGGTTCAGACACGATTACCATGGCATCTATACCAAAAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTAGTTAAGTTAGCTGAAGTCATTGGGAGCTTCAGAACCCTTAAGAAAATGACGCTGTTTTGGTGTAGTGTTGTTTCTGAACTTAGAAGACTTTGGTCTGAAGAAGCATATGTACCTAGCATTCCTGTGGATGAGATTCCAGATCTGAATTCTTGTCTTTTGTACCAGCGGTTGCAAGTTATCAATTGTTGTGTTTCCAGGAAAAGGCGACGTGATATTGCCACTGAAACACTAGAGTTTGTAATTAGAGAAGCCAGTCCAAATGCTGAAGAATCATCCGTTTCTACAGACAATGCTGCGGGCCCTGTTTTGTATGCTCGAATAAGCACTGGGGAACTGGTTCTCCGATTAGGTGCTGATTGCCCATACGGTAACCTAAAAATGTTGGAAACTGGTGAACCTATGTATACCCCTGTAACTCAGGAAGGACCTTTACTTACTGAAGATCTGATCAAGGAAACAGAGGAGTTTGTGCTTCGAACAGGAAGTGTTGGTGCTGGATGTTCTCAACTCCTCTCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGATTTTGTTAGATGGCATTCTCCTCCCGACTGGACAGAGGCTGAGCCAAGTACCGAGGCTGAATCGCTGGATGGTAATGACGTATCATCCGCAAGAGGCCAATTAAGTAGCCGAATGCAAAAAGCAGGCAATCTCTGGCATGAGCTATGGGATACATCCAAACCAGTTCCAGCAGTAAAACAAGTACCCCTCTTTGACGAGGACTTAGCTGTGGAAGGTATTCTGGATGGTTTTGAGGACATATCACCTTCTGAGCTTTTTGAGCAGCTGTTTATTTCTTTGCTTGGTTTAGGGTTTGTAATTGCTGAGGCCAAATTGTCCACTAACAGCGATTTTTCAAAGCTGTTCTATGAATGCAAGGACTTTGTGGTATCCACTTGTCAAGGCAAAATGTGGACAGAGAAGGTTGACGAGCTTTGTCAGGTATTTGAAACAGTTGAGGCTATGATACTCAATCCAGAGGAAGTCCTAAGAATAATGAAGCAGCCGGAAGAAACCATGACCCCTTCTTCTAGTGAACCAAAAAGTCGTTTCAGGCGGCTGACCCTCAACTTCGGTGGCAAAGATAGACAGTTGAAAAAATCAGCTTCTAAGGACCAGAAGAACTCACAAAGCCCTGGTAGCCAACCATTTTCAAGTTTCTTTGACAACAAGTCATCATTATTTTCAAAAAAGCCTCCTAAGCCTGAAAGTGCATCCCCTGTTGAAAAACCGTCAATTACGGAAGACAATGATTGGACAGTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BSD Rab3-GTPase_cat

Protein Analysis

757

Amino Acids

84.53

Weight (kDa)

5.22

Isoelectric Point (pI)

54.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rab3-GTPase_cat PF13890 436 - 586 2.3e-50 Rab3 GTPase-activating protein catalytic subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 302
AccB7I CCANNNNNTGG 1 cut(s) 244
AccI GTMKAC 1 cut(s) 1367
AccII CGCG 1 cut(s) 53
AclWI GGATC 1 cut(s) 310
AcoI YGGCCR 1 cut(s) 657
AcsI RAATTY 6 cut(s) 133, 263, 535, 721, 868, 1108
AcuI CTGAAG 5 cut(s) 976, 996, 1080, 1248, 1422
AcyI GRCGYC 1 cut(s) 299
AfaI GTAC 5 cut(s) 542, 1074, 1124, 1576, 1710
AfiI CCNNNNNNNGG 4 cut(s) 30, 244, 398, 1164
AflII CTTAAG 1 cut(s) 1001
AhdI GACNNNNNGTC 1 cut(s) 2176
AjiI CACGTC 1 cut(s) 1172
AjnI CCWGG 5 cut(s) 100, 350, 1157, 1507, 2140
AjuI GAANNNNNNNTTGG 2 cut(s) 689, 721
AloI GAACNNNNNNTCC 2 cut(s) 1287, 1319
Alw21I GWGCWC 1 cut(s) 946
Alw26I GTCTC 3 cut(s) 145, 379, 761
AlwI GGATC 1 cut(s) 310
AlwNI CAGNNNCTG 1 cut(s) 1565
AoxI GGCC 5 cut(s) 495, 657, 1261, 1621, 1833
ApaI GGGCCC 1 cut(s) 1265
ApeKI GCWGC 5 cut(s) 611, 1256, 1499, 1789, 2008
ApoI RAATTY 6 cut(s) 133, 263, 535, 721, 868, 1108
AseI ATTAAT 1 cut(s) 587
Asp700I GAANNNNTTC 3 cut(s) 588, 1299, 1743
AspS9I GGNCC 4 cut(s) 1261, 1262, 1388, 2119
AsuC2I CCSGG 1 cut(s) 342
AsuHPI GGTGA 5 cut(s) 98, 272, 720, 1367, 1761
AsuII TTCGAA 1 cut(s) 1438
AvaII GGWCC 2 cut(s) 1388, 2119
BaeGI GKGCMC 1 cut(s) 1265
BalI TGGCCA 1 cut(s) 659
BanII GRGCYC 1 cut(s) 1265
BarI GAAGNNNNNNTAC 4 cut(s) 1056, 1088, 1377, 1409
BbsI GAAGAC 2 cut(s) 1054, 2256
Bbv12I GWGCWC 1 cut(s) 946
BbvCI CCTCAGC 1 cut(s) 1830
BbvI GCAGC 5 cut(s) 598, 1243, 1486, 1801, 2020
BccI CCATC 3 cut(s) 1530, 1589, 1745
BcgI CGANNNNNNTGC 2 cut(s) 77, 111
BciT130I CCWGG 5 cut(s) 102, 352, 1159, 1509, 2142
BciVI GTATCC 3 cut(s) 31, 1669, 1906
BclI TGATCA 1 cut(s) 1410
BcnI CCSGG 1 cut(s) 342
BcoDI GTCTC 3 cut(s) 145, 379, 761
BfaI CTAG 3 cut(s) 1077, 1193, 2037
BfmI CTRYAG 1 cut(s) 1245
BfrI CTTAAG 1 cut(s) 1001
BfuI GTATCC 3 cut(s) 31, 1669, 1906
BglII AGATCT 3 cut(s) 700, 1102, 1405
BisI GCNGC 8 cut(s) 51, 54, 612, 1257, 1500, 1790, 2009, 2063
BlpI GCTNAGC 2 cut(s) 607, 1566
BlsI GCNGC 8 cut(s) 52, 55, 613, 1258, 1501, 1791, 2010, 2064
Bme1390I CCNGG 6 cut(s) 102, 342, 352, 1159, 1509, 2142
Bme18I GGWCC 2 cut(s) 1388, 2119
BmeRI GACNNNNNGTC 1 cut(s) 2176
BmgBI CACGTC 1 cut(s) 1172
BmgT120I GGNCC 4 cut(s) 1261, 1262, 1388, 2119
BmiI GGNNCC 1 cut(s) 1263
BmrFI CCNGG 6 cut(s) 102, 342, 352, 1159, 1509, 2142
BmrI ACTGGG 1 cut(s) 1299
BmsI GCATC 4 cut(s) 719, 847, 926, 2228
BmuI ACTGGG 1 cut(s) 1299
BoxI GACNNNNGTC 1 cut(s) 1054
BpiI GAAGAC 2 cut(s) 1054, 2256
BplI GAGNNNNNCTC 1 cut(s) 28
Bpu10I CCTNAGC 2 cut(s) 1830, 2205
Bpu1102I GCTNAGC 2 cut(s) 607, 1566
Bpu14I TTCGAA 1 cut(s) 1438
BpuMI CCSGG 1 cut(s) 342
Bsa29I ATCGAT 1 cut(s) 888
BsaBI GATNNNNATC 1 cut(s) 314
BsaHI GRCGYC 1 cut(s) 299
BsaI GGTCTC 1 cut(s) 379
BsaXI ACNNNNNCTCC 2 cut(s) 1287, 1317
Bsc4I CCNNNNNNNGG 4 cut(s) 30, 244, 398, 1164
Bse1I ACTGG 7 cut(s) 731, 1215, 1294, 1302, 1357, 1559, 1688
Bse8I GATNNNNATC 1 cut(s) 314
BseBI CCWGG 5 cut(s) 102, 352, 1159, 1509, 2142
BseCI ATCGAT 1 cut(s) 888
BseGI GGATG 9 cut(s) 337, 1096, 1235, 1466, 1600, 1610, 1679, 1756, 2219
BseJI GATNNNNATC 1 cut(s) 314
BseLI CCNNNNNNNGG 4 cut(s) 30, 244, 398, 1164
BseMII CTCAG 7 cut(s) 186, 609, 743, 1394, 1557, 1767, 1821
BseNI ACTGG 7 cut(s) 731, 1215, 1294, 1302, 1357, 1559, 1688
BseRI GAGGAG 5 cut(s) 133, 936, 1439, 1463, 1536
BseSI GKGCMC 1 cut(s) 1265
BseXI GCAGC 5 cut(s) 598, 1243, 1486, 1801, 2020
Bsh1236I CGCG 1 cut(s) 53
Bsh1285I CGRYCG 1 cut(s) 97
BshFI GGCC 5 cut(s) 497, 659, 1263, 1623, 1835
BshVI ATCGAT 1 cut(s) 888
BsiEI CGRYCG 1 cut(s) 97
BsiHKAI GWGCWC 1 cut(s) 946
BsiSI CCGG 2 cut(s) 341, 2012
BslFI GGGAC 1 cut(s) 415
BslI CCNNNNNNNGG 4 cut(s) 30, 244, 398, 1164
BsmAI GTCTC 3 cut(s) 145, 379, 761
BsmFI GGGAC 1 cut(s) 415
BsmI GAATGC 4 cut(s) 1080, 1540, 1644, 1883
BsnI GGCC 5 cut(s) 497, 659, 1263, 1623, 1835
Bso31I GGTCTC 1 cut(s) 379
Bsp119I TTCGAA 1 cut(s) 1438
Bsp120I GGGCCC 1 cut(s) 1261
Bsp1286I GDGCHC 2 cut(s) 946, 1265
Bsp1407I TGTACA 1 cut(s) 540
Bsp143I GATC 8 cut(s) 94, 276, 315, 700, 885, 1102, 1405, 1410
Bsp1720I GCTNAGC 2 cut(s) 607, 1566
Bsp19I CCATGG 2 cut(s) 510, 912
BspANI GGCC 5 cut(s) 497, 659, 1263, 1623, 1835
BspCNI CTCAG 7 cut(s) 185, 608, 744, 1393, 1558, 1768, 1822
BspDI ATCGAT 1 cut(s) 888
BspFNI CGCG 1 cut(s) 53
BspLI GGNNCC 1 cut(s) 1263
BspPI GGATC 1 cut(s) 310
BspT104I TTCGAA 1 cut(s) 1438
BspTI CTTAAG 1 cut(s) 1001
BspTNI GGTCTC 1 cut(s) 379
BsrGI TGTACA 1 cut(s) 540
BsrI ACTGG 7 cut(s) 731, 1215, 1294, 1302, 1357, 1559, 1688
BssMI GATC 8 cut(s) 94, 276, 315, 700, 885, 1102, 1405, 1410
BssNAI GTATAC 1 cut(s) 1368
BssNI GRCGYC 1 cut(s) 299
BssT1I CCWWGG 2 cut(s) 510, 912
Bst1107I GTATAC 1 cut(s) 1368
Bst2UI CCWGG 5 cut(s) 102, 352, 1159, 1509, 2142
Bst4CI ACNGT 5 cut(s) 1331, 1960, 2097, 2238, 2266
BstACI GRCGYC 1 cut(s) 299
BstAFI CTTAAG 1 cut(s) 1001
BstAUI TGTACA 1 cut(s) 540
BstBI TTCGAA 1 cut(s) 1438
BstC8I GCNNGC 4 cut(s) 324, 1261, 1488, 1651
BstDSI CCRYGG 3 cut(s) 51, 510, 912
BstEII GGTNACC 2 cut(s) 104, 1331
BstF5I GGATG 9 cut(s) 337, 1096, 1235, 1466, 1600, 1610, 1679, 1756, 2219
BstFNI CGCG 1 cut(s) 53
BstKTI GATC 8 cut(s) 97, 279, 318, 703, 888, 1105, 1408, 1413
BstMAI GTCTC 3 cut(s) 145, 379, 761
BstMBI GATC 8 cut(s) 94, 276, 315, 700, 885, 1102, 1405, 1410
BstMCI CGRYCG 1 cut(s) 97
BstNI CCWGG 5 cut(s) 102, 352, 1159, 1509, 2142
BstNSI RCATGY 1 cut(s) 1486
BstPAI GACNNNNGTC 1 cut(s) 1054
BstPI GGTNACC 2 cut(s) 104, 1331
BstSCI CCNGG 6 cut(s) 100, 340, 350, 1157, 1507, 2140
BstSFI CTRYAG 1 cut(s) 1245
BstSLI GKGCMC 1 cut(s) 1265
BstUI CGCG 1 cut(s) 53
BstV1I GCAGC 5 cut(s) 598, 1243, 1486, 1801, 2020
BstV2I GAAGAC 2 cut(s) 1054, 2256
BstX2I RGATCY 3 cut(s) 700, 1102, 1405
BstYI RGATCY 3 cut(s) 700, 1102, 1405
BstZ17I GTATAC 1 cut(s) 1368
Bsu15I ATCGAT 1 cut(s) 888
BsuI GTATCC 3 cut(s) 31, 1669, 1906
BsuRI GGCC 5 cut(s) 497, 659, 1263, 1623, 1835
BsuTUI ATCGAT 1 cut(s) 888
BtgI CCRYGG 3 cut(s) 51, 510, 912
BtrI CACGTC 1 cut(s) 1172
BtsCI GGATG 9 cut(s) 337, 1096, 1235, 1466, 1600, 1610, 1679, 1756, 2219
BtsIMutI CAGTG 2 cut(s) 1182, 1287
Cac8I GCNNGC 4 cut(s) 324, 1261, 1488, 1651
CaiI CAGNNNCTG 1 cut(s) 1565
Cfr13I GGNCC 4 cut(s) 1261, 1262, 1388, 2119
Cfr42I CCGCGG 1 cut(s) 54
ClaI ATCGAT 1 cut(s) 888
CseI GACGC 1 cut(s) 1021
Csp6I GTAC 5 cut(s) 541, 1073, 1123, 1575, 1709
CspCI CAANNNNNGTGG 4 cut(s) 649, 684, 2062, 2097
CviAII CATG 8 cut(s) 362, 511, 553, 913, 938, 1483, 1664, 2023
CviQI GTAC 5 cut(s) 541, 1073, 1123, 1575, 1709
DpnI GATC 8 cut(s) 96, 278, 317, 702, 887, 1104, 1407, 1412
DpnII GATC 8 cut(s) 94, 276, 315, 700, 885, 1102, 1405, 1410
DraI TTTAAA 1 cut(s) 229
DriI GACNNNNNGTC 1 cut(s) 2176
EaeI YGGCCR 1 cut(s) 657
Eam1105I GACNNNNNGTC 1 cut(s) 2176
EciI GGCGGA 3 cut(s) 37, 621, 895
Eco130I CCWWGG 2 cut(s) 510, 912
Eco24I GRGCYC 1 cut(s) 1265
Eco31I GGTCTC 1 cut(s) 379
Eco47I GGWCC 2 cut(s) 1388, 2119
Eco57I CTGAAG 5 cut(s) 976, 996, 1080, 1248, 1422
Eco91I GGTNACC 2 cut(s) 104, 1331
EcoO109I RGGNCCY 2 cut(s) 1262, 1388
EcoO65I GGTNACC 2 cut(s) 104, 1331
EcoRI GAATTC 1 cut(s) 1108
EcoRII CCWGG 5 cut(s) 100, 350, 1157, 1507, 2140
EcoT14I CCWWGG 2 cut(s) 510, 912
EcoT38I GRGCYC 1 cut(s) 1265
ErhI CCWWGG 2 cut(s) 510, 912
FaeI CATG 8 cut(s) 365, 514, 556, 916, 941, 1486, 1667, 2026
FaqI GGGAC 1 cut(s) 415
FatI CATG 8 cut(s) 361, 510, 552, 912, 937, 1482, 1663, 2022
FauI CCCGC 1 cut(s) 1252
FauNDI CATATG 1 cut(s) 1069
FbaI TGATCA 1 cut(s) 1410
FblI GTMKAC 1 cut(s) 1367
Fnu4HI GCNGC 8 cut(s) 51, 54, 612, 1257, 1500, 1790, 2009, 2063
FokI GGATG 9 cut(s) 344, 1103, 1222, 1473, 1597, 1607, 1666, 1763, 2206
FriOI GRGCYC 1 cut(s) 1265
Fsp4HI GCNGC 8 cut(s) 51, 54, 612, 1257, 1500, 1790, 2009, 2063
FspBI CTAG 3 cut(s) 1077, 1193, 2037
GluI GCNGC 8 cut(s) 51, 54, 612, 1257, 1500, 1790, 2009, 2063
HaeIII GGCC 5 cut(s) 497, 659, 1263, 1623, 1835
HapII CCGG 2 cut(s) 341, 2012
HgaI GACGC 1 cut(s) 1021
Hin1I GRCGYC 1 cut(s) 299
Hin1II CATG 8 cut(s) 365, 514, 556, 916, 941, 1486, 1667, 2026
HincII GTYRAC 1 cut(s) 1933
HindII GTYRAC 1 cut(s) 1933
HindIII AAGCTT 1 cut(s) 604
HpaII CCGG 2 cut(s) 341, 2012
HphI GGTGA 5 cut(s) 98, 272, 720, 1367, 1761
Hpy166II GTNNAC 6 cut(s) 1358, 1368, 1845, 1920, 1933, 2042
Hpy188III TCNNGA 8 cut(s) 717, 785, 950, 1100, 1382, 1550, 1748, 1982
Hpy8I GTNNAC 6 cut(s) 1358, 1368, 1845, 1920, 1933, 2042
Hpy99I CGWCG 2 cut(s) 304, 1173
HpyAV CCTTC 8 cut(s) 25, 49, 487, 1379, 1733, 1782, 1921, 2040
HpyCH4III ACNGT 5 cut(s) 1331, 1960, 2097, 2238, 2266
HpyCH4IV ACGT 3 cut(s) 299, 1171, 1605
HpyCH4V TGCA 8 cut(s) 181, 860, 1135, 1486, 1502, 1642, 1881, 2219
HpySE526I ACGT 3 cut(s) 299, 1171, 1605
Hsp92I GRCGYC 1 cut(s) 299
Hsp92II CATG 8 cut(s) 365, 514, 556, 916, 941, 1486, 1667, 2026
Ksp22I TGATCA 1 cut(s) 1410
KspI CCGCGG 1 cut(s) 54
Kzo9I GATC 8 cut(s) 94, 276, 315, 700, 885, 1102, 1405, 1410
LmnI GCTCC 3 cut(s) 64, 949, 987
Lsp1109I GCAGC 5 cut(s) 598, 1243, 1486, 1801, 2020
LweI GCATC 4 cut(s) 719, 847, 926, 2228
MaeI CTAG 3 cut(s) 1077, 1193, 2037
MaeII ACGT 3 cut(s) 299, 1171, 1605
MaeIII GTNAC 3 cut(s) 104, 1331, 1375
MalI GATC 8 cut(s) 96, 278, 317, 702, 887, 1104, 1407, 1412
MboI GATC 8 cut(s) 94, 276, 315, 700, 885, 1102, 1405, 1410
MfeI CAATTG 2 cut(s) 653, 1144
MflI RGATCY 3 cut(s) 700, 1102, 1405
MhlI GDGCHC 2 cut(s) 946, 1265
MlsI TGGCCA 1 cut(s) 659
MluNI TGGCCA 1 cut(s) 659
MlyI GAGTC 3 cut(s) 14, 356, 763
MmeI TCCRAC 1 cut(s) 1326
Mox20I TGGCCA 1 cut(s) 659
MroXI GAANNNNTTC 3 cut(s) 588, 1299, 1743
MscI TGGCCA 1 cut(s) 659
MseI TTAA 5 cut(s) 228, 587, 966, 1002, 1628
MslI CAYNNNNRTG 1 cut(s) 1085
Msp20I TGGCCA 1 cut(s) 659
MspA1I CMGCKG 4 cut(s) 53, 665, 1129, 1792
MspCI CTTAAG 1 cut(s) 1001
MspI CCGG 2 cut(s) 341, 2012
MspR9I CCNGG 6 cut(s) 102, 342, 352, 1159, 1509, 2142
MunI CAATTG 2 cut(s) 653, 1144
Mva1269I GAATGC 4 cut(s) 1080, 1540, 1644, 1883
MvaI CCWGG 5 cut(s) 102, 352, 1159, 1509, 2142
MvnI CGCG 1 cut(s) 53
NciI CCSGG 1 cut(s) 342
NcoI CCATGG 2 cut(s) 510, 912
NdeI CATATG 1 cut(s) 1069
NdeII GATC 8 cut(s) 94, 276, 315, 700, 885, 1102, 1405, 1410
NlaIII CATG 8 cut(s) 365, 514, 556, 916, 941, 1486, 1667, 2026
NlaIV GGNNCC 1 cut(s) 1263
NmeAIII GCCGAG 3 cut(s) 330, 352, 523
NmuCI GTSAC 1 cut(s) 104
NspI RCATGY 1 cut(s) 1486
NspV TTCGAA 1 cut(s) 1438
PctI GAATGC 4 cut(s) 1080, 1540, 1644, 1883
PdmI GAANNNNTTC 3 cut(s) 588, 1299, 1743
PfeI GAWTC 9 cut(s) 287, 335, 365, 628, 841, 890, 1096, 1232, 1586
PflMI CCANNNNNTGG 1 cut(s) 244
PfoI TCCNGGA 1 cut(s) 1157
PkrI GCNGC 8 cut(s) 52, 55, 613, 1258, 1501, 1791, 2010, 2064
Ple19I CGATCG 1 cut(s) 97
PleI GAGTC 3 cut(s) 13, 355, 762
PpsI GAGTC 3 cut(s) 13, 355, 762
PpuMI RGGWCCY 1 cut(s) 1388
PshAI GACNNNNGTC 1 cut(s) 1054
PshBI ATTAAT 1 cut(s) 587
Psp5II RGGWCCY 1 cut(s) 1388
Psp6I CCWGG 5 cut(s) 100, 350, 1157, 1507, 2140
PspEI GGTNACC 2 cut(s) 104, 1331
PspGI CCWGG 5 cut(s) 100, 350, 1157, 1507, 2140
PspN4I GGNNCC 1 cut(s) 1263
PspOMI GGGCCC 1 cut(s) 1261
PspPI GGNCC 4 cut(s) 1261, 1262, 1388, 2119
PspPPI RGGWCCY 1 cut(s) 1388
PstNI CAGNNNCTG 1 cut(s) 1565
PsuI RGATCY 3 cut(s) 700, 1102, 1405
PvuI CGATCG 1 cut(s) 97
PvuII CAGCTG 2 cut(s) 665, 1792
RsaI GTAC 5 cut(s) 542, 1074, 1124, 1576, 1710
RsaNI GTAC 5 cut(s) 541, 1073, 1123, 1575, 1709
RseI CAYNNNNRTG 1 cut(s) 1085
SacII CCGCGG 1 cut(s) 54
SaqAI TTAA 5 cut(s) 228, 587, 966, 1002, 1628
SatI GCNGC 8 cut(s) 51, 54, 612, 1257, 1500, 1790, 2009, 2063
Sau3AI GATC 8 cut(s) 94, 276, 315, 700, 885, 1102, 1405, 1410
Sau96I GGNCC 4 cut(s) 1261, 1262, 1388, 2119
SchI GAGTC 3 cut(s) 14, 356, 763
ScrFI CCNGG 6 cut(s) 102, 342, 352, 1159, 1509, 2142
SduI GDGCHC 2 cut(s) 946, 1265
SfaNI GCATC 4 cut(s) 719, 847, 926, 2228
SfcI CTRYAG 1 cut(s) 1245
Sfr303I CCGCGG 1 cut(s) 54
SfuI TTCGAA 1 cut(s) 1438
SgrBI CCGCGG 1 cut(s) 54
SinI GGWCC 2 cut(s) 1388, 2119
SmiI ATTTAAAT 1 cut(s) 229
SmiMI CAYNNNNRTG 1 cut(s) 1085
SmlI CTYRAG 1 cut(s) 1001
SmoI CTYRAG 1 cut(s) 1001
SspI AATATT 1 cut(s) 457
SspMI CTAG 3 cut(s) 1077, 1193, 2037
StyD4I CCNGG 6 cut(s) 100, 340, 350, 1157, 1507, 2140
StyI CCWWGG 2 cut(s) 510, 912
SwaI ATTTAAAT 1 cut(s) 229
TaaI ACNGT 5 cut(s) 1331, 1960, 2097, 2238, 2266
TaiI ACGT 3 cut(s) 302, 1174, 1608
TaqI TCGA 3 cut(s) 888, 1279, 1438
TatI WGTACW 1 cut(s) 540
TauI GCSGC 3 cut(s) 53, 56, 2065
TfiI GAWTC 9 cut(s) 287, 335, 365, 628, 841, 890, 1096, 1232, 1586
Tru1I TTAA 5 cut(s) 228, 587, 966, 1002, 1628
Tru9I TTAA 5 cut(s) 228, 587, 966, 1002, 1628
TscAI CASTG 2 cut(s) 1189, 1294
TseFI GTSAC 1 cut(s) 104
TseI GCWGC 5 cut(s) 611, 1256, 1499, 1789, 2008
Tsp45I GTSAC 1 cut(s) 104
TspDTI ATGAA 8 cut(s) 348, 378, 546, 569, 710, 926, 1890, 2018
TspGWI ACGGA 2 cut(s) 1228, 2261
TspRI CASTG 2 cut(s) 1189, 1294
Van91I CCANNNNNTGG 1 cut(s) 244
Vha464I CTTAAG 1 cut(s) 1001
VpaK11BI GGWCC 2 cut(s) 1388, 2119
VspI ATTAAT 1 cut(s) 587
XapI RAATTY 6 cut(s) 133, 263, 535, 721, 868, 1108
XceI RCATGY 1 cut(s) 1486
XmiI GTMKAC 1 cut(s) 1367
XmnI GAANNNNTTC 3 cut(s) 588, 1299, 1743
XspI CTAG 3 cut(s) 1077, 1193, 2037
ZraI GACGTC 1 cut(s) 300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.