Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0010239

Physical Location & Seq

Genomic Coordinates Forward (+)

1396298 .. 1400173

Gene Structure 3876 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1012900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGGGTGGCGCCAGCAATCGTTTCTTCACCATCCTCTCCACCACCACCACCAGCCACCCTTTCCACCGCTTACCTTCTCTTCTCCGCCTCTCCCGCCAATACAAACCCCCACTCTTCCCCTCCTCCCTCTCTTTCCTTTCCCACCGTCACTCCCTCCCTTCCCGCCCCTCCTCCTCCGCCTCATCTTTCCCTCCCGGTTCCTCTCACCATTTCCATTCCCACTCCCCCGTTTCCTCCGCCTACCCTTCTTCTTCCACCGACTCCGCCACTTTCCCAGCCTCGCACCCCTGGCCCGAGTGGTCCCACCTCGTTAACTCTCTCTCCGCCGCCGGATACAACGGAGGCAACGGCCAAGATGAGTTCACAGCTGCGGTTCGGGATTTGCCCGAGGACTTTATGCGTGCCGCCAGTGTTTGCTTGGGGTTTGCTAGGCAAAGAGCTGGCCTTTTGAGGTTGCTTTCGAGGCGAGATTTAGAGGTTGTGGTGGAGAATGGGACGCCATTTCTGTTCCAGAATGGCGATGTTTCGGCGAGGCGAATGAGATTGTTTCTCGGCCAAGGCAGTACCAATGCCTTGGACATTGATAAAGCACAAACGATTGATTTGATGAGATTTATATTGAGTTATGCTAGCAATCCTGTTTTTTCTTCAGAGAGAAACAATCTCTATAATAGAGAAATTGTTGAATCATCTGTTCGTACTCTGTTGAGTGAACTGGCCAAGCTCTGTTATAGTGTTCCAGATTCGAACTCTATTGGGTCAATGCAGAGTCGATCCTCTGATAACTTTGGAGAATCTGCTAGGCCTTTTGAAAAAACTATTGAAATGAAAAGAGGTGATTGGATTTGCCAGAGGTGTAATTTCATGAACTTTGCAAGAAATATGAAATGCCTTGAGTGCGAGGAGGCACGGCCAAAAAGGGAGCTGACTGGCAAGGAGTGGGAGTGTCCTCAATGTGATTTTTTTAACTATGGGAGAAACATGGTATGTTTGAGGTGTGATTGCAAGCGCCCTGGAGAGGTCTCACATGGTTCCACTAATGATGGTTTAGATATGGGATATGTAAATATGGGTGATAAAAGTCAGGCTAATATTGATAGCAGGCTGGCCGCTAATGAAGAGAAGGCACAGCGGTGGTTCAGTAAGATTTCTCAGCTAGACAGTACTTCAGACATGAGCAGCGCTGTATCTGATGAAGATTTTCCTGAAATAATGCCATTGAGAAAAGGAGTAAACAGATTTGTTGTGAGCACAAGGAAGACTCCATTAGAGAGGAGGCTGGCCAATGCTCAATACCAAAGAAACGTGGATAATGAGGGTAATTACCAAGGCAAGGATCTTCAACCTGGGAGTGTGAATAGGTCACTTGGTCGTACACCCAACAGGACTTTAGATGAAATTCTCGGCCGTGTTAATACAAGTACGAATCCCAGACAAAATGTTGGAACTGATACTCCCTCTTCTATATCAAGCTCAGTTTCCTCGGAATATGGACAACCTAGAGGGGGGAATTCCAATTATCCCCAATTTGTGCCATTACCCGCTGATTCGTTTGCCAAGAAACCTGAGAATTCTAGTGTGGAGGAGAGTATGCAGCTGTCTGAGAAGCCTCCGGAACAGGCTGGGAGCAAGGATGAAGAAAGAGACCAAGCTGAAAAATCTGAGAGATGGTTTAAGAGGGTTGCAGAGTTGCACGATGTTACCGATCTTGCAAGCGCAATTTCAGATGAGGACTTTCCTGAAATTATGCCGATGCGAAAAGGAGAGAATCGATTTGTTGTCAGCAAAAAGAAAGATCGGTCTTTGACTACTCCGGCATCCAAGAGACGTACAGCTACTGAACAACCTAACAATGGCAATTATGTTCCCTTCGTCCCATTCCCACCCGACTACTTTGCTAAAAAAAAGAACCAGCAGACAGATTTGACTAACAAGATTGCTGATGAATCAACTTCAACTACGATGCCAGATAACTCTTCAGACAGTTTGGTTGATGCTAGACCTCACGTGCAACTGGTGAAAAATCAGCAAAGCAATGTGCCAAGCTGGTATTCAGAAAATTCGGGACAAAATCAGTTCGGGGATTCTGCCCCAAGTTTTGCTAATTCTAGCTCATACGGCATGGATGGATTGAACATTGGATCTTCTGGGAAAGAGAAGTCTAACCAGACAGCAAGTTCAACAGGAAATTCACCGCAGCAATCCAATGATCAGAACATTAGACAGGGCTGGAGTGGGAAAAGCTTGGAGGGGTCAGCAGTGAAGGAACCCGATCCTTTAGACATGTCAGAGGAGGCGAAGGCAGAGAGATGGTTCAAGCGCGTTGCGCAGATAAAGGACATCTCAGAGCTGAGTCAGATTCCCGATGAAGATTTCCCGTCAATAATGCCAATGCGTAAAGGGGTGAATAGGTTTGTTGTCAGCAAGCGGAAAACGCCGTTGGAGAGGAGGTTGACATCTCCACAATACAGAAAAAATCTTCCTGTTGTAAGCTCTGATCCAGCAAAGGAAAGAGATAGTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ribosomal_L24e zf-RanBP

Protein Analysis

842

Amino Acids

93.78

Weight (kDa)

7.9

Isoelectric Point (pI)

55.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	278 - 304	2.2e-06	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17790
fragaria_vesca	FvH4_2g05470
malus_domestica	MD12G1012900.v1.1 MD14G1010700.v1.1
prunus_persica	Prupe.7G017200_v2.0.a1
pyrus_communis	pycom05g28400 pycom12g01030 pycom14g00910
rosa_chinensis	RchiOBHm_Chr3g0495901
rosa_laevigata	RLG00000022581
rosa_multiflora	Rmu_co8376015.1_g000001 Rmu_co8410629.1_g000001
rosa_roxburghii	Rroxscaffold_6G00389920
rosa_rugosa	Rorug03G0276900 Rorug03G0277000 Rorug03G0277100
rosa_samantha	Rh3AG324800 Rh3BG360800 Rh3CG357100 Rh3DG359900
rosa_wichuraiana	Rw3G028370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2328
AccB1I	GGYRCC	1 cut(s)	8
AccII	CGCG	1 cut(s)	2322
AccIII	TCCGGA	1 cut(s)	1612
AclWI	GGATC	5 cut(s)	768, 1344, 2149, 2267, 2492
AcoI	YGGCCR	7 cut(s)	349, 553, 717, 911, 1107, 1281, 1405
AcsI	RAATTY	5 cut(s)	1398, 1510, 1570, 2059, 2188
AcuI	CTGAAG	3 cut(s)	633, 1152, 1962
AcvI	CACGTG	1 cut(s)	2008
AcyI	GRCGYC	2 cut(s)	9, 497
AfaI	GTAC	6 cut(s)	565, 700, 1165, 1375, 1423, 1831
AfeI	AGCGCT	1 cut(s)	1183
AfiI	CCNNNNNNNGG	4 cut(s)	1018, 1333, 1505, 1853
AflIII	ACRYGT	1 cut(s)	2283
AgsI	TTSAA	8 cut(s)	686, 812, 824, 1343, 1956, 2134, 2181, 2317
AjnI	CCWGG	3 cut(s)	287, 1012, 1345
AjuI	GAANNNNNNNTTGG	4 cut(s)	2035, 2067, 2423, 2455
AleI	CACNNNNGTG	1 cut(s)	1132
AloI	GAACNNNNNNTCC	2 cut(s)	1438, 1470
Alw21I	GWGCWC	1 cut(s)	1253
Alw26I	GTCTC	3 cut(s)	1027, 1638, 1819
AlwI	GGATC	5 cut(s)	768, 1344, 2149, 2267, 2492
AlwNI	CAGNNNCTG	1 cut(s)	1838
Ama87I	CYCGRG	2 cut(s)	293, 386
Aor13HI	TCCGGA	1 cut(s)	1612
Aor51HI	AGCGCT	1 cut(s)	1183
ApeKI	GCWGC	4 cut(s)	368, 1179, 1594, 2197
ApoI	RAATTY	5 cut(s)	1398, 1510, 1570, 2059, 2188
Asp700I	GAANNNNTTC	1 cut(s)	1200
AspLEI	GCGC	6 cut(s)	11, 1011, 1184, 1718, 2322, 2329
AspS9I	GGNCC	2 cut(s)	291, 300
AsuC2I	CCSGG	1 cut(s)	195
AsuHPI	GGTGA	7 cut(s)	19, 197, 848, 1085, 2029, 2184, 2416
AsuII	TTCGAA	1 cut(s)	746
AsuNHI	GCTAGC	1 cut(s)	629
AvaI	CYCGRG	2 cut(s)	293, 386
AvaII	GGWCC	1 cut(s)	300
BalI	TGGCCA	2 cut(s)	719, 1283
BanI	GGYRCC	1 cut(s)	8
BbrPI	CACGTG	1 cut(s)	2008
BbsI	GAAGAC	1 cut(s)	1265
Bbv12I	GWGCWC	1 cut(s)	1253
BbvI	GCAGC	4 cut(s)	355, 1191, 1606, 2209
BccI	CCATC	5 cut(s)	38, 1037, 1662, 2120, 2304
BceAI	ACGGC	5 cut(s)	364, 926, 1392, 2134, 2422
BcgI	CGANNNNNNTGC	2 cut(s)	1877, 1911
BciT130I	CCWGG	3 cut(s)	289, 1014, 1347
BciVI	GTATCC	1 cut(s)	326
BclI	TGATCA	1 cut(s)	2209
BcnI	CCSGG	1 cut(s)	195
BcoDI	GTCTC	3 cut(s)	1027, 1638, 1819
BfaI	CTAG	8 cut(s)	429, 630, 801, 1157, 1500, 1575, 1998, 2109
BfoI	RGCGCY	3 cut(s)	12, 1012, 1185
BfuI	GTATCC	1 cut(s)	326
BisI	GCNGC	7 cut(s)	327, 369, 405, 1110, 1180, 1595, 2198
BlsI	GCNGC	7 cut(s)	328, 370, 406, 1111, 1181, 1596, 2199
BmcAI	AGTACT	1 cut(s)	1165
Bme1390I	CCNGG	4 cut(s)	195, 289, 1014, 1347
Bme18I	GGWCC	1 cut(s)	300
BmeT110I	CYCGRG	2 cut(s)	293, 386
BmgT120I	GGNCC	2 cut(s)	291, 300
BmiI	GGNNCC	5 cut(s)	10, 199, 302, 1033, 2268
BmrFI	CCNGG	4 cut(s)	195, 289, 1014, 1347
BmsI	GCATC	4 cut(s)	1743, 1826, 1953, 1984
BmtI	GCTAGC	1 cut(s)	633
BpiI	GAAGAC	1 cut(s)	1265
BpmI	CTGGAG	2 cut(s)	1035, 2251
Bpu14I	TTCGAA	1 cut(s)	746
BpuEI	CTTGAG	1 cut(s)	914
BpuMI	CCSGG	1 cut(s)	195
Bsa29I	ATCGAT	1 cut(s)	1771
BsaAI	YACGTR	1 cut(s)	2008
BsaHI	GRCGYC	2 cut(s)	9, 497
BsaI	GGTCTC	2 cut(s)	1027, 1638
BsaJI	CCNNGG	8 cut(s)	287, 387, 556, 573, 1012, 1327, 1346, 1482
BsaWI	WCCGGW	1 cut(s)	1612
Bsc4I	CCNNNNNNNGG	4 cut(s)	1018, 1333, 1505, 1853
Bse1I	ACTGG	4 cut(s)	408, 720, 934, 2019
Bse3DI	GCAATG	1 cut(s)	2041
BseAI	TCCGGA	1 cut(s)	1612
BseBI	CCWGG	3 cut(s)	289, 1014, 1347
BseCI	ATCGAT	1 cut(s)	1771
BseDI	CCNNGG	8 cut(s)	287, 387, 556, 573, 1012, 1327, 1346, 1482
BseGI	GGATG	4 cut(s)	30, 1639, 1817, 2131
BseLI	CCNNNNNNNGG	4 cut(s)	1018, 1333, 1505, 1853
BseMI	GCAATG	1 cut(s)	2041
BseMII	CTCAG	7 cut(s)	1166, 1488, 1557, 1593, 1653, 2342, 2358
BseNI	ACTGG	4 cut(s)	408, 720, 934, 2019
BseRI	GAGGAG	8 cut(s)	112, 160, 163, 917, 1288, 1598, 2306, 2461
BseX3I	CGGCCG	1 cut(s)	1405
BseXI	GCAGC	4 cut(s)	355, 1191, 1606, 2209
BseYI	CCCAGC	2 cut(s)	274, 1622
Bsh1236I	CGCG	1 cut(s)	2322
Bsh1285I	CGRYCG	1 cut(s)	1408
BshNI	GGYRCC	1 cut(s)	8
BshVI	ATCGAT	1 cut(s)	1771
BsiEI	CGRYCG	1 cut(s)	1408
BsiHKAI	GWGCWC	1 cut(s)	1253
BsiHKCI	CYCGRG	2 cut(s)	293, 386
BsiSI	CCGG	4 cut(s)	195, 330, 1613, 1814
BslFI	GGGAC	4 cut(s)	286, 508, 1859, 2079
BslI	CCNNNNNNNGG	4 cut(s)	1018, 1333, 1505, 1853
BsmAI	GTCTC	3 cut(s)	1027, 1638, 1819
BsmBI	CGTCTC	1 cut(s)	1819
BsmFI	GGGAC	4 cut(s)	286, 508, 1859, 2079
Bso31I	GGTCTC	2 cut(s)	1027, 1638
BsoBI	CYCGRG	2 cut(s)	293, 386
Bsp119I	TTCGAA	1 cut(s)	746
Bsp1286I	GDGCHC	1 cut(s)	1253
Bsp13I	TCCGGA	1 cut(s)	1612
Bsp143I	GATC	8 cut(s)	773, 1336, 1705, 1795, 2141, 2209, 2272, 2497
BspCNI	CTCAG	7 cut(s)	1165, 1487, 1558, 1594, 1654, 2343, 2357
BspDI	ATCGAT	1 cut(s)	1771
BspEI	TCCGGA	1 cut(s)	1612
BspFNI	CGCG	1 cut(s)	2322
BspHI	TCATGA	1 cut(s)	864
BspLI	GGNNCC	5 cut(s)	10, 199, 302, 1033, 2268
BspOI	GCTAGC	1 cut(s)	633
BspPI	GGATC	5 cut(s)	768, 1344, 2149, 2267, 2492
BspT104I	TTCGAA	1 cut(s)	746
BspT107I	GGYRCC	1 cut(s)	8
BspTNI	GGTCTC	2 cut(s)	1027, 1638
BsrDI	GCAATG	1 cut(s)	2041
BsrI	ACTGG	4 cut(s)	408, 720, 934, 2019
BssECI	CCNNGG	8 cut(s)	287, 387, 556, 573, 1012, 1327, 1346, 1482
BssMI	GATC	8 cut(s)	773, 1336, 1705, 1795, 2141, 2209, 2272, 2497
BssNI	GRCGYC	2 cut(s)	9, 497
BssT1I	CCWWGG	3 cut(s)	556, 573, 1327
Bst2UI	CCWGG	3 cut(s)	289, 1014, 1347
Bst4CI	ACNGT	3 cut(s)	146, 1163, 1985
Bst6I	CTCTTC	5 cut(s)	84, 119, 1113, 1465, 1981
BstACI	GRCGYC	2 cut(s)	9, 497
BstBAI	YACGTR	1 cut(s)	2008
BstBI	TTCGAA	1 cut(s)	746
BstDEI	CTNAG	7 cut(s)	1152, 1474, 1566, 1602, 1662, 2344, 2351
BstF5I	GGATG	4 cut(s)	30, 1639, 1817, 2131
BstFNI	CGCG	1 cut(s)	2322
BstH2I	RGCGCY	3 cut(s)	12, 1012, 1185
BstHHI	GCGC	6 cut(s)	11, 1011, 1184, 1718, 2322, 2329
BstKTI	GATC	8 cut(s)	776, 1339, 1708, 1798, 2144, 2212, 2275, 2500
BstMAI	GTCTC	3 cut(s)	1027, 1638, 1819
BstMBI	GATC	8 cut(s)	773, 1336, 1705, 1795, 2141, 2209, 2272, 2497
BstMCI	CGRYCG	1 cut(s)	1408
BstMWI	GCNNNNNNNGC	7 cut(s)	93, 289, 463, 897, 2118, 2326, 2434
BstNI	CCWGG	3 cut(s)	289, 1014, 1347
BstNSI	RCATGY	1 cut(s)	2287
BstSCI	CCNGG	4 cut(s)	193, 287, 1012, 1345
BstUI	CGCG	1 cut(s)	2322
BstV1I	GCAGC	4 cut(s)	355, 1191, 1606, 2209
BstV2I	GAAGAC	1 cut(s)	1265
BstX2I	RGATCY	2 cut(s)	1336, 2141
BstXI	CCANNNNNNTGG	1 cut(s)	574
BstYI	RGATCY	2 cut(s)	1336, 2141
BstZI	CGGCCG	1 cut(s)	1405
Bsu15I	ATCGAT	1 cut(s)	1771
BsuI	GTATCC	1 cut(s)	326
BsuTUI	ATCGAT	1 cut(s)	1771
BtgZI	GCGATG	1 cut(s)	534
BtsCI	GGATG	4 cut(s)	30, 1639, 1817, 2131
BtsI	GCAGTG	1 cut(s)	2265
BtsIMutI	CAGTG	2 cut(s)	415, 2265
CaiI	CAGNNNCTG	1 cut(s)	1838
CciI	TCATGA	1 cut(s)	864
CfoI	GCGC	6 cut(s)	11, 1011, 1184, 1718, 2322, 2329
Cfr13I	GGNCC	2 cut(s)	291, 300
ClaI	ATCGAT	1 cut(s)	1771
CseI	GACGC	1 cut(s)	505
Csp6I	GTAC	6 cut(s)	564, 699, 1164, 1374, 1422, 1830
CviAII	CATG	6 cut(s)	865, 982, 1028, 1174, 2122, 2284
CviQI	GTAC	6 cut(s)	564, 699, 1164, 1374, 1422, 1830
DdeI	CTNAG	7 cut(s)	1152, 1474, 1566, 1602, 1662, 2344, 2351
DinI	GGCGCC	1 cut(s)	10
DpnI	GATC	8 cut(s)	775, 1338, 1707, 1797, 2143, 2211, 2274, 2499
DpnII	GATC	8 cut(s)	773, 1336, 1705, 1795, 2141, 2209, 2272, 2497
EaeI	YGGCCR	7 cut(s)	349, 553, 717, 911, 1107, 1281, 1405
EagI	CGGCCG	1 cut(s)	1405
Eam1104I	CTCTTC	5 cut(s)	84, 119, 1113, 1465, 1981
EarI	CTCTTC	5 cut(s)	84, 119, 1113, 1465, 1981
EciI	GGCGGA	5 cut(s)	74, 166, 226, 253, 313
EclXI	CGGCCG	1 cut(s)	1405
Eco130I	CCWWGG	3 cut(s)	556, 573, 1327
Eco147I	AGGCCT	1 cut(s)	805
Eco31I	GGTCTC	2 cut(s)	1027, 1638
Eco47I	GGWCC	1 cut(s)	300
Eco47III	AGCGCT	1 cut(s)	1183
Eco52I	CGGCCG	1 cut(s)	1405
Eco57I	CTGAAG	3 cut(s)	633, 1152, 1962
Eco72I	CACGTG	1 cut(s)	2008
Eco88I	CYCGRG	2 cut(s)	293, 386
EcoRI	GAATTC	2 cut(s)	1510, 1570
EcoRII	CCWGG	3 cut(s)	287, 1012, 1345
EcoT14I	CCWWGG	3 cut(s)	556, 573, 1327
EgeI	GGCGCC	1 cut(s)	10
EheI	GGCGCC	1 cut(s)	10
ErhI	CCWWGG	3 cut(s)	556, 573, 1327
Esp3I	CGTCTC	1 cut(s)	1819
FaeI	CATG	6 cut(s)	868, 985, 1031, 1177, 2125, 2287
FaqI	GGGAC	4 cut(s)	286, 508, 1859, 2079
FatI	CATG	6 cut(s)	864, 981, 1027, 1173, 2121, 2283
FauI	CCCGC	3 cut(s)	101, 170, 1549
FbaI	TGATCA	1 cut(s)	2209
Fnu4HI	GCNGC	7 cut(s)	327, 369, 405, 1110, 1180, 1595, 2198
FokI	GGATG	4 cut(s)	17, 1646, 1804, 2138
Fsp4HI	GCNGC	7 cut(s)	327, 369, 405, 1110, 1180, 1595, 2198
FspBI	CTAG	8 cut(s)	429, 630, 801, 1157, 1500, 1575, 1998, 2109
FspI	TGCGCA	1 cut(s)	2328
GlaI	GCGC	6 cut(s)	10, 1010, 1183, 1717, 2321, 2328
GluI	GCNGC	7 cut(s)	327, 369, 405, 1110, 1180, 1595, 2198
GsaI	CCCAGC	2 cut(s)	278, 1626
GsuI	CTGGAG	2 cut(s)	1035, 2251
HaeII	RGCGCY	3 cut(s)	12, 1012, 1185
HapII	CCGG	4 cut(s)	195, 330, 1613, 1814
HgaI	GACGC	1 cut(s)	505
HhaI	GCGC	6 cut(s)	11, 1011, 1184, 1718, 2322, 2329
Hin1I	GRCGYC	2 cut(s)	9, 497
Hin1II	CATG	6 cut(s)	868, 985, 1031, 1177, 2125, 2287
Hin6I	GCGC	6 cut(s)	9, 1009, 1182, 1716, 2320, 2327
HinP1I	GCGC	6 cut(s)	9, 1009, 1182, 1716, 2320, 2327
HincII	GTYRAC	2 cut(s)	313, 2454
HindII	GTYRAC	2 cut(s)	313, 2454
HindIII	AAGCTT	1 cut(s)	2242
HpaI	GTTAAC	1 cut(s)	313
HpaII	CCGG	4 cut(s)	195, 330, 1613, 1814
HphI	GGTGA	7 cut(s)	19, 197, 848, 1085, 2029, 2184, 2416
Hpy166II	GTNNAC	6 cut(s)	313, 363, 713, 1234, 1376, 2454
Hpy188III	TCNNGA	9 cut(s)	377, 511, 740, 865, 1205, 1613, 1739, 2064, 2363
Hpy8I	GTNNAC	6 cut(s)	313, 363, 713, 1234, 1376, 2454
HpyAV	CCTTC	7 cut(s)	84, 168, 255, 1117, 1879, 2257, 2293
HpyCH4III	ACNGT	3 cut(s)	146, 1163, 1985
HpyCH4IV	ACGT	3 cut(s)	1305, 1828, 2007
HpyCH4V	TGCA	8 cut(s)	766, 875, 1005, 1594, 1685, 1693, 1712, 2011
HpyF10VI	GCNNNNNNNGC	7 cut(s)	93, 289, 463, 897, 2118, 2326, 2434
HpyF3I	CTNAG	7 cut(s)	1152, 1474, 1566, 1602, 1662, 2344, 2351
HpySE526I	ACGT	3 cut(s)	1305, 1828, 2007
Hsp92I	GRCGYC	2 cut(s)	9, 497
Hsp92II	CATG	6 cut(s)	868, 985, 1031, 1177, 2125, 2287
HspAI	GCGC	6 cut(s)	9, 1009, 1182, 1716, 2320, 2327
KasI	GGCGCC	1 cut(s)	8
Kpn2I	TCCGGA	1 cut(s)	1612
Ksp22I	TGATCA	1 cut(s)	2209
KspAI	GTTAAC	1 cut(s)	313
Kzo9I	GATC	8 cut(s)	773, 1336, 1705, 1795, 2141, 2209, 2272, 2497
LmnI	GCTCC	2 cut(s)	922, 1626
Lsp1109I	GCAGC	4 cut(s)	355, 1191, 1606, 2209
LweI	GCATC	4 cut(s)	1743, 1826, 1953, 1984
MaeI	CTAG	8 cut(s)	429, 630, 801, 1157, 1500, 1575, 1998, 2109
MaeII	ACGT	3 cut(s)	1305, 1828, 2007
MaeIII	GTNAC	4 cut(s)	146, 1362, 1699, 2519
MalI	GATC	8 cut(s)	775, 1338, 1707, 1797, 2143, 2211, 2274, 2499
MboI	GATC	8 cut(s)	773, 1336, 1705, 1795, 2141, 2209, 2272, 2497
MflI	RGATCY	2 cut(s)	1336, 2141
MhlI	GDGCHC	1 cut(s)	1253
MlsI	TGGCCA	2 cut(s)	719, 1283
MluNI	TGGCCA	2 cut(s)	719, 1283
Mly113I	GGCGCC	1 cut(s)	9
MlyI	GAGTC	4 cut(s)	254, 778, 1255, 2362
MmeI	TCCRAC	2 cut(s)	1423, 2421
Mox20I	TGGCCA	2 cut(s)	719, 1283
MroI	TCCGGA	1 cut(s)	1612
MroXI	GAANNNNTTC	1 cut(s)	1200
MscI	TGGCCA	2 cut(s)	719, 1283
MseI	TTAA	4 cut(s)	312, 966, 1413, 1674
MslI	CAYNNNNRTG	1 cut(s)	1132
Msp20I	TGGCCA	2 cut(s)	719, 1283
MspA1I	CMGCKG	4 cut(s)	368, 1132, 1544, 1597
MspI	CCGG	4 cut(s)	195, 330, 1613, 1814
MspR9I	CCNGG	4 cut(s)	195, 289, 1014, 1347
MvaI	CCWGG	3 cut(s)	289, 1014, 1347
MvnI	CGCG	1 cut(s)	2322
MwoI	GCNNNNNNNGC	7 cut(s)	93, 289, 463, 897, 2118, 2326, 2434
NarI	GGCGCC	1 cut(s)	9
NciI	CCSGG	1 cut(s)	195
NdeII	GATC	8 cut(s)	773, 1336, 1705, 1795, 2141, 2209, 2272, 2497
NheI	GCTAGC	1 cut(s)	629
NlaIII	CATG	6 cut(s)	868, 985, 1031, 1177, 2125, 2287
NlaIV	GGNNCC	5 cut(s)	10, 199, 302, 1033, 2268
NmeAIII	GCCGAG	2 cut(s)	531, 1383
NmuCI	GTSAC	3 cut(s)	146, 1362, 2519
NsbI	TGCGCA	1 cut(s)	2328
NspI	RCATGY	1 cut(s)	2287
NspV	TTCGAA	1 cut(s)	746
OliI	CACNNNNGTG	1 cut(s)	1132
PagI	TCATGA	1 cut(s)	864
PceI	AGGCCT	1 cut(s)	805
PciI	ACATGT	1 cut(s)	2283
PcsI	WCGNNNNNNNCGW	1 cut(s)	1701
PdmI	GAANNNNTTC	1 cut(s)	1200
PfeI	GAWTC	9 cut(s)	686, 743, 794, 1426, 1547, 1768, 1946, 2084, 2359
PkrI	GCNGC	7 cut(s)	328, 370, 406, 1111, 1181, 1596, 2199
PleI	GAGTC	4 cut(s)	254, 777, 1255, 2361
PluTI	GGCGCC	1 cut(s)	12
PmaCI	CACGTG	1 cut(s)	2008
PmlI	CACGTG	1 cut(s)	2008
PpsI	GAGTC	4 cut(s)	254, 777, 1255, 2361
Ppu21I	YACGTR	1 cut(s)	2008
PscI	ACATGT	1 cut(s)	2283
Psp6I	CCWGG	3 cut(s)	287, 1012, 1345
PspCI	CACGTG	1 cut(s)	2008
PspFI	CCCAGC	2 cut(s)	274, 1622
PspGI	CCWGG	3 cut(s)	287, 1012, 1345
PspN4I	GGNNCC	5 cut(s)	10, 199, 302, 1033, 2268
PspPI	GGNCC	2 cut(s)	291, 300
PstNI	CAGNNNCTG	1 cut(s)	1838
PsuI	RGATCY	2 cut(s)	1336, 2141
PvuII	CAGCTG	2 cut(s)	368, 1597
RsaI	GTAC	6 cut(s)	565, 700, 1165, 1375, 1423, 1831
RsaNI	GTAC	6 cut(s)	564, 699, 1164, 1374, 1422, 1830
RseI	CAYNNNNRTG	1 cut(s)	1132
SaqAI	TTAA	4 cut(s)	312, 966, 1413, 1674
SatI	GCNGC	7 cut(s)	327, 369, 405, 1110, 1180, 1595, 2198
Sau3AI	GATC	8 cut(s)	773, 1336, 1705, 1795, 2141, 2209, 2272, 2497
Sau96I	GGNCC	2 cut(s)	291, 300
ScaI	AGTACT	1 cut(s)	1165
SchI	GAGTC	4 cut(s)	254, 778, 1255, 2362
ScrFI	CCNGG	4 cut(s)	195, 289, 1014, 1347
SduI	GDGCHC	1 cut(s)	1253
SfaNI	GCATC	4 cut(s)	1743, 1826, 1953, 1984
SfoI	GGCGCC	1 cut(s)	10
SfuI	TTCGAA	1 cut(s)	746
SinI	GGWCC	1 cut(s)	300
SmiMI	CAYNNNNRTG	1 cut(s)	1132
SmlI	CTYRAG	1 cut(s)	893
SmoI	CTYRAG	1 cut(s)	893
SseBI	AGGCCT	1 cut(s)	805
SspDI	GGCGCC	1 cut(s)	8
SspI	AATATT	1 cut(s)	1093
SspMI	CTAG	8 cut(s)	429, 630, 801, 1157, 1500, 1575, 1998, 2109
StuI	AGGCCT	1 cut(s)	805
StyD4I	CCNGG	4 cut(s)	193, 287, 1012, 1345
StyI	CCWWGG	3 cut(s)	556, 573, 1327
TaaI	ACNGT	3 cut(s)	146, 1163, 1985
TaiI	ACGT	3 cut(s)	1308, 1831, 2010
TaqI	TCGA	4 cut(s)	461, 746, 772, 1771
TaqII	GACCGA	1 cut(s)	1788
TatI	WGTACW	1 cut(s)	1163
TauI	GCSGC	3 cut(s)	329, 407, 1112
TfiI	GAWTC	9 cut(s)	686, 743, 794, 1426, 1547, 1768, 1946, 2084, 2359
Tru1I	TTAA	4 cut(s)	312, 966, 1413, 1674
Tru9I	TTAA	4 cut(s)	312, 966, 1413, 1674
TscAI	CASTG	2 cut(s)	415, 2265
TseFI	GTSAC	3 cut(s)	146, 1362, 2519
TseI	GCWGC	4 cut(s)	368, 1179, 1594, 2197
Tsp45I	GTSAC	3 cut(s)	146, 1362, 2519
TspGWI	ACGGA	1 cut(s)	354
TspRI	CASTG	2 cut(s)	415, 2265
VpaK11BI	GGWCC	1 cut(s)	300
XapI	RAATTY	5 cut(s)	1398, 1510, 1570, 2059, 2188
XceI	RCATGY	1 cut(s)	2287
XcmI	CCANNNNNNNNNTGG	1 cut(s)	415
XmnI	GAANNNNTTC	1 cut(s)	1200
XspI	CTAG	8 cut(s)	429, 630, 801, 1157, 1500, 1575, 1998, 2109
ZrmI	AGTACT	1 cut(s)	1165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.