Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0010239

Physical Location & Seq

Genomic Coordinates Reverse (-)

43830548 .. 43834259

Gene Structure 3712 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG357100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGAGATTTATATTGAGTTATGCTAGCACTCCTGTTTTTTCTTCAGAGCGAAACAACCTCTACAATAGAGAACTTGTTGAATCATCTGTCCGTAATCTGTTGAGAGAAATGGCGAAGCTTTGTTATAGCGCTCCAGAGTCTAACTCTTTTGGGACAGTGCAGAATCAAAGTTCTAATAATCATGGAGCAACTCCTGGGCCTTTTGGCAAAACTATTGAAATGAAAAGAGGCGACTGGATTTGCTCAAGGTGCAATTTCATGAACTTCGCAAAAAACATGAAATGCCTTGAATGCAATGAGGCAAAGCCACACAGACAGCTGACTGGCAGAGAGTGGGAGTGTCCTCAATGTGATTTTTTTAACTACGGGAGAAACATGGTATGCTTGAGGTGTGATTGCAAGCGGCCCGGGGAGGTCTCACGTGGTACCACTAAAACTAATTTAGATATTGGATTCGACAATGGAGATGATACAAATAAAGCTGATATCAATAGCAGGCTGGCTGCCAATGAAGAGAAGGCACAGCGGTGGTTTAGTAAGATTTCTCAGTTAGACAGTACTTCAGACATGAGCAGTGCAATATCAGATGAAGATTTTCCTGAAATAATGCCATTGACGAAAGGAGTAAATAGATTTGTTGTGAGTACAAGGAAGACACCATTAGAGAGGAGGCTGGTGAATGCCCAGTACCAAAGAAGTTTGGATACTGATGAAATCAAGGATCTCCAAAAGGGGAGTGCAACTAAGTCACTTGGTGCTACATCGAGCCAGACTTTAGATACTATTCTCGGTCGTTCATCTGTTTCTGAATCAAATACTACCAATACCAATGCTGGAGAACATGGTAAAACTGACAACCCCTCTTTTATCTCTAGCTCAGGTTCCACACAGTATCAACAGCCCAGACAGAGGAACTCCAATTATGCCCCATTTGTGCCATTACCTGCAGATGCGTTTGCTAAGAAACCTGAGACTTCATATATGGAGGAGAGTGGGAAGTTAGTGAGAGACCAAAATGAGTCTGTCACTTTGAAGGGCAGTGAATTGGAAGGTGTTTCTGGGAACAATCAATCTGGTAAATCAGAAGACAGTCTGATATCTGCAAAGTCTATGAAACAAGCCGGCAGCAGGAATGAAGAAAAGGAACAAGCTGAAAAATCTGAGAGATGGTTTAAGAGGGTTGCAGAGTTGCATGATGTTACAGATCTTGCAAGTGCAATTTCCGATGAGGACTTCCCTGAAATCATGCCGGTCCGCAAAGGAGAGAATCGATTTATGGTCAGCAAGAAGAAAGATCGTTCTTCGTCTTCTCCAGCATACAAGAGAGTACCAGCTATGGAACAACCTAACAGTGCCAACTATGTTCCCTTTGTTCCCTTCCCACCTGACTACTTTGCTAAAGTTGACAATCCACAGACAAGCGGGACAGCTTTGGATAACAAGACTGGTGTTAAGTCAACTCCAACTATGATGCCAGAGAACCCTGTAGACAAATCGTTTGACACAAGACCTGGGACGCTGAATACTAGTCATAGTCAACAGATGGAAAGTCAGCAAAGCCGTGTTGCCAACTTGAAATCTAGGTCTTCTGAAGATAATCCTAGAAAGAAATGGACTAGCTCTGTTAATGGACCCCCAGCCAGTGGAAATTCTGCCTTGAATTTTGCTAATACTACCACTGATGGTACGGACAGATTGAACAGTGGAACTTCAGGGAAAGAGAATTTTGATGAGTTAATGGATTCGCACCATCCGTCCAATGAACAGAACATTAGACAGCGCTGGACTGGGAAGAGTTTGGAGGGGTCAGCAGTGAAGGAACCAAATCCTTTAGATATGTCAGAGGAGGCAAAGGCAGAGAGATGGTTTAAGCGTGTTGCTCAGATTAAAGACATATCAGAGCTGAGTCAGATTCCTGATGAAGATTTCCCATCAATAATGCCAATGCGTAAAGGAGTGAATCGGTTTGTGGTCAGCAAGAGGAAAACACCGTTGGAGAGGAGGTTGACGTCTCCACAGTACAGAAAAAGCCTTCCTGTTGTGAGCTCTGATCCAGTGAAGGAAGATGATGGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ribosomal_L24e zf-RanBP

Protein Analysis

692

Amino Acids

77.27

Weight (kDa)

8.15

Isoelectric Point (pI)

53.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	76 - 98	1.7e-06	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17790
fragaria_vesca	FvH4_2g05470
malus_domestica	MD12G1012900.v1.1 MD14G1010700.v1.1
prunus_persica	Prupe.7G017200_v2.0.a1
pyrus_communis	pycom05g28400 pycom12g01030 pycom14g00910
rosa_chinensis	RchiOBHm_Chr3g0495901
rosa_laevigata	RLG00000022581
rosa_multiflora	Rmu_co8376015.1_g000001 Rmu_co8410629.1_g000001
rosa_roxburghii	Rroxscaffold_6G00389920
rosa_rugosa	Rorug03G0276900 Rorug03G0277000 Rorug03G0277100
rosa_samantha	Rh3AG324800 Rh3BG360800 Rh3CG357100 Rh3DG359900
rosa_wichuraiana	Rw3G028370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2012
Acc36I	ACCTGC	1 cut(s)	952
Acc65I	GGTACC	1 cut(s)	425
AccB1I	GGYRCC	1 cut(s)	425
AccB7I	CCANNNNNTGG	1 cut(s)	1643
AccI	GTMKAC	1 cut(s)	1488
AciI	CCGC	4 cut(s)	403, 526, 1255, 1422
AclWI	GGATC	2 cut(s)	729, 2045
AcsI	RAATTY	3 cut(s)	1648, 1660, 1723
AcuI	CTGAAG	4 cut(s)	27, 546, 1611, 1695
AcvI	CACGTG	1 cut(s)	422
AcyI	GRCGYC	1 cut(s)	2009
AdeI	CACNNNGTG	1 cut(s)	755
AfaI	GTAC	7 cut(s)	427, 559, 646, 689, 1329, 1687, 2021
AfeI	AGCGCT	2 cut(s)	130, 1781
AfiI	CCNNNNNNNGG	3 cut(s)	909, 1128, 1643
AgsI	TTSAA	7 cut(s)	80, 218, 290, 1033, 1576, 1660, 1699
AhlI	ACTAGT	1 cut(s)	1526
AjnI	CCWGG	2 cut(s)	193, 1510
AjuI	GAANNNNNNNTTGG	2 cut(s)	1976, 2008
AleI	CACNNNNGTG	1 cut(s)	526
Alw21I	GWGCWC	1 cut(s)	2048
Alw26I	GTCTC	4 cut(s)	421, 965, 1002, 2016
AlwI	GGATC	2 cut(s)	729, 2045
Ama87I	CYCGRG	1 cut(s)	407
Aor51HI	AGCGCT	2 cut(s)	130, 1781
AoxI	GGCC	2 cut(s)	197, 404
ApeKI	GCWGC	2 cut(s)	503, 1125
ApoI	RAATTY	3 cut(s)	1648, 1660, 1723
ArsI	GACNNNNNNTTYG	2 cut(s)	1481, 1513
Asp700I	GAANNNNTTC	1 cut(s)	594
Asp718I	GGTACC	1 cut(s)	425
AspLEI	GCGC	2 cut(s)	131, 1782
AspS9I	GGNCC	4 cut(s)	197, 405, 1252, 1631
AsuC2I	CCSGG	2 cut(s)	408, 409
AsuHPI	GGTGA	1 cut(s)	688
AsuNHI	GCTAGC	1 cut(s)	23
AvaI	CYCGRG	1 cut(s)	407
AvaII	GGWCC	2 cut(s)	1252, 1631
BanI	GGYRCC	1 cut(s)	425
BanII	GRGCYC	1 cut(s)	2048
BarI	GAAGNNNNNNTAC	2 cut(s)	688, 720
BbrPI	CACGTG	1 cut(s)	422
BbsI	GAAGAC	4 cut(s)	659, 1092, 1299, 1578
Bbv12I	GWGCWC	1 cut(s)	2048
BbvI	GCAGC	2 cut(s)	490, 1137
BccI	CCATC	7 cut(s)	1161, 1537, 1676, 1758, 1857, 1939, 2063
BceAI	ACGGC	1 cut(s)	1545
BciT130I	CCWGG	2 cut(s)	195, 1512
BciVI	GTATCC	1 cut(s)	697
BcnI	CCSGG	2 cut(s)	408, 409
BcoDI	GTCTC	4 cut(s)	421, 965, 1002, 2016
BcuI	ACTAGT	1 cut(s)	1526
BfaI	CTAG	6 cut(s)	24, 873, 1527, 1581, 1602, 1617
BfmI	CTRYAG	2 cut(s)	945, 1485
BfoI	RGCGCY	2 cut(s)	132, 1783
BfuAI	ACCTGC	1 cut(s)	952
BfuI	GTATCC	1 cut(s)	697
BglII	AGATCT	1 cut(s)	1204
BisI	GCNGC	3 cut(s)	404, 504, 1126
BlsI	GCNGC	3 cut(s)	405, 505, 1127
BmcAI	AGTACT	1 cut(s)	559
Bme1390I	CCNGG	4 cut(s)	195, 408, 409, 1512
Bme18I	GGWCC	2 cut(s)	1252, 1631
BmeT110I	CYCGRG	1 cut(s)	407
BmgT120I	GGNCC	4 cut(s)	197, 405, 1252, 1631
BmiI	GGNNCC	4 cut(s)	427, 883, 1633, 1821
BmrFI	CCNGG	4 cut(s)	195, 408, 409, 1512
BmrI	ACTGGG	2 cut(s)	679, 1797
BmsI	GCATC	2 cut(s)	940, 1461
BmtI	GCTAGC	1 cut(s)	27
BmuI	ACTGGG	2 cut(s)	679, 1797
BpiI	GAAGAC	4 cut(s)	659, 1092, 1299, 1578
BplI	GAGNNNNNCTC	2 cut(s)	128, 160
BpmI	CTGGAG	3 cut(s)	117, 855, 1296
Bpu10I	CCTNAGC	1 cut(s)	877
BpuEI	CTTGAG	2 cut(s)	229, 406
BpuMI	CCSGG	2 cut(s)	408, 409
Bsa29I	ATCGAT	1 cut(s)	1270
BsaAI	YACGTR	1 cut(s)	422
BsaHI	GRCGYC	1 cut(s)	2009
BsaI	GGTCTC	2 cut(s)	421, 1002
BsaJI	CCNNGG	4 cut(s)	194, 407, 408, 1511
BsaXI	ACNNNNNCTCC	2 cut(s)	1988, 2018
Bsc4I	CCNNNNNNNGG	3 cut(s)	909, 1128, 1643
Bse118I	RCCGGY	2 cut(s)	1121, 1249
Bse1I	ACTGG	7 cut(s)	239, 328, 685, 1450, 1641, 1792, 2054
Bse3DI	GCAATG	1 cut(s)	301
BseBI	CCWGG	2 cut(s)	195, 1512
BseCI	ATCGAT	1 cut(s)	1270
BseDI	CCNNGG	4 cut(s)	194, 407, 408, 1511
BseGI	GGATG	1 cut(s)	1750
BseLI	CCNNNNNNNGG	3 cut(s)	909, 1128, 1643
BseMI	GCAATG	1 cut(s)	301
BseMII	CTCAG	6 cut(s)	560, 891, 960, 1152, 1895, 1895
BseNI	ACTGG	7 cut(s)	239, 328, 685, 1450, 1641, 1792, 2054
BseRI	GAGGAG	4 cut(s)	682, 1001, 1859, 2014
BseXI	GCAGC	2 cut(s)	490, 1137
BseYI	CCCAGC	1 cut(s)	1636
BsgI	GTGCAG	1 cut(s)	179
Bsh1285I	CGRYCG	1 cut(s)	793
BshFI	GGCC	2 cut(s)	199, 406
BshNI	GGYRCC	1 cut(s)	425
BshVI	ATCGAT	1 cut(s)	1270
BsiEI	CGRYCG	1 cut(s)	793
BsiHKAI	GWGCWC	1 cut(s)	2048
BsiHKCI	CYCGRG	1 cut(s)	407
BsiSI	CCGG	3 cut(s)	408, 1122, 1250
BslFI	GGGAC	3 cut(s)	166, 1438, 1528
BslI	CCNNNNNNNGG	3 cut(s)	909, 1128, 1643
BsmAI	GTCTC	4 cut(s)	421, 965, 1002, 2016
BsmBI	CGTCTC	1 cut(s)	2016
BsmFI	GGGAC	3 cut(s)	166, 1438, 1528
BsmI	GAATGC	2 cut(s)	296, 685
BsnI	GGCC	2 cut(s)	199, 406
Bso31I	GGTCTC	2 cut(s)	421, 1002
BsoBI	CYCGRG	1 cut(s)	407
Bsp1286I	GDGCHC	1 cut(s)	2048
Bsp143I	GATC	4 cut(s)	721, 1204, 1294, 2050
BspACI	CCGC	4 cut(s)	403, 526, 1255, 1422
BspANI	GGCC	2 cut(s)	199, 406
BspCNI	CTCAG	6 cut(s)	559, 890, 961, 1153, 1894, 1896
BspDI	ATCGAT	1 cut(s)	1270
BspHI	TCATGA	1 cut(s)	258
BspLI	GGNNCC	4 cut(s)	427, 883, 1633, 1821
BspMAI	CTGCAG	1 cut(s)	949
BspMI	ACCTGC	1 cut(s)	952
BspOI	GCTAGC	1 cut(s)	27
BspPI	GGATC	2 cut(s)	729, 2045
BspT107I	GGYRCC	1 cut(s)	425
BspTNI	GGTCTC	2 cut(s)	421, 1002
BsrDI	GCAATG	1 cut(s)	301
BsrFI	RCCGGY	2 cut(s)	1121, 1249
BsrI	ACTGG	7 cut(s)	239, 328, 685, 1450, 1641, 1792, 2054
BssAI	RCCGGY	2 cut(s)	1121, 1249
BssECI	CCNNGG	4 cut(s)	194, 407, 408, 1511
BssMI	GATC	4 cut(s)	721, 1204, 1294, 2050
BssNI	GRCGYC	1 cut(s)	2009
Bst2UI	CCWGG	2 cut(s)	195, 1512
Bst4CI	ACNGT	8 cut(s)	157, 557, 891, 1091, 1352, 1703, 1992, 2019
Bst6I	CTCTTC	2 cut(s)	507, 1787
BstACI	GRCGYC	1 cut(s)	2009
BstBAI	YACGTR	1 cut(s)	422
BstC8I	GCNNGC	5 cut(s)	25, 401, 497, 501, 1123
BstDEI	CTNAG	8 cut(s)	546, 744, 877, 960, 969, 1161, 1881, 1904
BstF5I	GGATG	1 cut(s)	1750
BstH2I	RGCGCY	2 cut(s)	132, 1783
BstHHI	GCGC	2 cut(s)	131, 1782
BstKTI	GATC	4 cut(s)	724, 1207, 1297, 2053
BstMAI	GTCTC	4 cut(s)	421, 965, 1002, 2016
BstMBI	GATC	4 cut(s)	721, 1204, 1294, 2050
BstMCI	CGRYCG	1 cut(s)	793
BstMWI	GCNNNNNNNGC	2 cut(s)	249, 291
BstNI	CCWGG	2 cut(s)	195, 1512
BstSCI	CCNGG	4 cut(s)	193, 406, 407, 1510
BstSFI	CTRYAG	2 cut(s)	945, 1485
BstV1I	GCAGC	2 cut(s)	490, 1137
BstV2I	GAAGAC	4 cut(s)	659, 1092, 1299, 1578
BstX2I	RGATCY	2 cut(s)	721, 1204
BstYI	RGATCY	2 cut(s)	721, 1204
Bsu15I	ATCGAT	1 cut(s)	1270
BsuI	GTATCC	1 cut(s)	697
BsuRI	GGCC	2 cut(s)	199, 406
BsuTUI	ATCGAT	1 cut(s)	1270
BtsCI	GGATG	1 cut(s)	1750
BtsI	GCAGTG	3 cut(s)	580, 1045, 1818
BtsIMutI	CAGTG	9 cut(s)	162, 580, 1045, 1357, 1648, 1677, 1708, 1818, 2061
BveI	ACCTGC	1 cut(s)	952
Cac8I	GCNNGC	5 cut(s)	25, 401, 497, 501, 1123
CciI	TCATGA	1 cut(s)	258
CfoI	GCGC	2 cut(s)	131, 1782
Cfr10I	RCCGGY	2 cut(s)	1121, 1249
Cfr13I	GGNCC	4 cut(s)	197, 405, 1252, 1631
Cfr9I	CCCGGG	1 cut(s)	407
ClaI	ATCGAT	1 cut(s)	1270
CpoI	CGGWCCG	1 cut(s)	1252
CseI	GACGC	1 cut(s)	1525
Csp6I	GTAC	7 cut(s)	426, 558, 645, 688, 1328, 1686, 2020
CspI	CGGWCCG	1 cut(s)	1252
CviAII	CATG	8 cut(s)	182, 259, 277, 376, 568, 842, 1193, 1246
CviQI	GTAC	7 cut(s)	426, 558, 645, 688, 1328, 1686, 2020
DdeI	CTNAG	8 cut(s)	546, 744, 877, 960, 969, 1161, 1881, 1904
DpnI	GATC	4 cut(s)	723, 1206, 1296, 2052
DpnII	GATC	4 cut(s)	721, 1204, 1294, 2050
DraIII	CACNNNGTG	1 cut(s)	755
Eam1104I	CTCTTC	2 cut(s)	507, 1787
EarI	CTCTTC	2 cut(s)	507, 1787
Ecl136II	GAGCTC	1 cut(s)	2046
Eco24I	GRGCYC	1 cut(s)	2048
Eco31I	GGTCTC	2 cut(s)	421, 1002
Eco32I	GATATC	2 cut(s)	487, 1098
Eco47I	GGWCC	2 cut(s)	1252, 1631
Eco47III	AGCGCT	2 cut(s)	130, 1781
Eco53kI	GAGCTC	1 cut(s)	2046
Eco57I	CTGAAG	4 cut(s)	27, 546, 1611, 1695
Eco72I	CACGTG	1 cut(s)	422
Eco88I	CYCGRG	1 cut(s)	407
EcoICRI	GAGCTC	1 cut(s)	2046
EcoRII	CCWGG	2 cut(s)	193, 1510
EcoRV	GATATC	2 cut(s)	487, 1098
EcoT38I	GRGCYC	1 cut(s)	2048
Esp3I	CGTCTC	1 cut(s)	2016
FaeI	CATG	8 cut(s)	185, 262, 280, 379, 571, 845, 1196, 1249
FaqI	GGGAC	3 cut(s)	166, 1438, 1528
FatI	CATG	8 cut(s)	181, 258, 276, 375, 567, 841, 1192, 1245
FauI	CCCGC	1 cut(s)	1415
FblI	GTMKAC	1 cut(s)	1488
Fnu4HI	GCNGC	3 cut(s)	404, 504, 1126
FokI	GGATG	1 cut(s)	1737
FriOI	GRGCYC	1 cut(s)	2048
Fsp4HI	GCNGC	3 cut(s)	404, 504, 1126
FspBI	CTAG	6 cut(s)	24, 873, 1527, 1581, 1602, 1617
GlaI	GCGC	2 cut(s)	130, 1781
GluI	GCNGC	3 cut(s)	404, 504, 1126
GsaI	CCCAGC	1 cut(s)	1640
GsuI	CTGGAG	3 cut(s)	117, 855, 1296
HaeII	RGCGCY	2 cut(s)	132, 1783
HaeIII	GGCC	2 cut(s)	199, 406
HapII	CCGG	3 cut(s)	408, 1122, 1250
HgaI	GACGC	1 cut(s)	1525
HhaI	GCGC	2 cut(s)	131, 1782
Hin1I	GRCGYC	1 cut(s)	2009
Hin1II	CATG	8 cut(s)	185, 262, 280, 379, 571, 845, 1196, 1249
Hin6I	GCGC	2 cut(s)	129, 1780
HinP1I	GCGC	2 cut(s)	129, 1780
HincII	GTYRAC	4 cut(s)	1405, 1458, 1538, 2007
HindII	GTYRAC	4 cut(s)	1405, 1458, 1538, 2007
HindIII	AAGCTT	1 cut(s)	116
HpaII	CCGG	3 cut(s)	408, 1122, 1250
HphI	GGTGA	1 cut(s)	688
Hpy166II	GTNNAC	5 cut(s)	1405, 1458, 1489, 1538, 2007
Hpy188III	TCNNGA	4 cut(s)	134, 259, 599, 1916
Hpy8I	GTNNAC	5 cut(s)	1405, 1458, 1489, 1538, 2007
HpyAV	CCTTC	7 cut(s)	511, 1027, 1043, 1387, 1810, 2042, 2053
HpyCH4III	ACNGT	8 cut(s)	157, 557, 891, 1091, 1352, 1703, 1992, 2019
HpyCH4IV	ACGT	2 cut(s)	421, 2009
HpyF10VI	GCNNNNNNNGC	2 cut(s)	249, 291
HpyF3I	CTNAG	8 cut(s)	546, 744, 877, 960, 969, 1161, 1881, 1904
HpySE526I	ACGT	2 cut(s)	421, 2009
Hsp92I	GRCGYC	1 cut(s)	2009
Hsp92II	CATG	8 cut(s)	185, 262, 280, 379, 571, 845, 1196, 1249
HspAI	GCGC	2 cut(s)	129, 1780
KpnI	GGTACC	1 cut(s)	429
KroI	GCCGGC	1 cut(s)	1121
KroNI	GCCGGC	1 cut(s)	1123
Kzo9I	GATC	4 cut(s)	721, 1204, 1294, 2050
LmnI	GCTCC	2 cut(s)	136, 185
Lsp1109I	GCAGC	2 cut(s)	490, 1137
LweI	GCATC	2 cut(s)	940, 1461
MaeI	CTAG	6 cut(s)	24, 873, 1527, 1581, 1602, 1617
MaeII	ACGT	2 cut(s)	421, 2009
MaeIII	GTNAC	4 cut(s)	747, 1024, 1198, 2072
MalI	GATC	4 cut(s)	723, 1206, 1296, 2052
MboI	GATC	4 cut(s)	721, 1204, 1294, 2050
MflI	RGATCY	2 cut(s)	721, 1204
MhlI	GDGCHC	1 cut(s)	2048
MluCI	AATT	8 cut(s)	253, 439, 919, 1043, 1218, 1648, 1660, 1723
MlyI	GAGTC	3 cut(s)	146, 1028, 1915
MmeI	TCCRAC	2 cut(s)	1487, 1974
MroNI	GCCGGC	1 cut(s)	1121
MroXI	GAANNNNTTC	1 cut(s)	594
MseI	TTAA	7 cut(s)	360, 1173, 1452, 1626, 1736, 1869, 1887
MslI	CAYNNNNRTG	1 cut(s)	526
MspA1I	CMGCKG	2 cut(s)	319, 526
MspI	CCGG	3 cut(s)	408, 1122, 1250
MspR9I	CCNGG	4 cut(s)	195, 408, 409, 1512
Mva1269I	GAATGC	2 cut(s)	296, 685
MvaI	CCWGG	2 cut(s)	195, 1512
MwoI	GCNNNNNNNGC	2 cut(s)	249, 291
NaeI	GCCGGC	1 cut(s)	1123
NciI	CCSGG	2 cut(s)	408, 409
NdeII	GATC	4 cut(s)	721, 1204, 1294, 2050
NgoMIV	GCCGGC	1 cut(s)	1121
NheI	GCTAGC	1 cut(s)	23
NlaIII	CATG	8 cut(s)	185, 262, 280, 379, 571, 845, 1196, 1249
NlaIV	GGNNCC	4 cut(s)	427, 883, 1633, 1821
NmuCI	GTSAC	2 cut(s)	747, 1024
OliI	CACNNNNGTG	1 cut(s)	526
PagI	TCATGA	1 cut(s)	258
PcsI	WCGNNNNNNNCGW	1 cut(s)	1751
PctI	GAATGC	2 cut(s)	296, 685
PdiI	GCCGGC	1 cut(s)	1123
PdmI	GAANNNNTTC	1 cut(s)	594
PfeI	GAWTC	8 cut(s)	80, 163, 453, 809, 1267, 1742, 1912, 1960
PflMI	CCANNNNNTGG	1 cut(s)	1643
PkrI	GCNGC	3 cut(s)	405, 505, 1127
PleI	GAGTC	3 cut(s)	145, 1027, 1914
PmaCI	CACGTG	1 cut(s)	422
PmlI	CACGTG	1 cut(s)	422
PpsI	GAGTC	3 cut(s)	145, 1027, 1914
Ppu21I	YACGTR	1 cut(s)	422
Psp124BI	GAGCTC	1 cut(s)	2048
Psp6I	CCWGG	2 cut(s)	193, 1510
PspCI	CACGTG	1 cut(s)	422
PspFI	CCCAGC	1 cut(s)	1636
PspGI	CCWGG	2 cut(s)	193, 1510
PspN4I	GGNNCC	4 cut(s)	427, 883, 1633, 1821
PspPI	GGNCC	4 cut(s)	197, 405, 1252, 1631
PstI	CTGCAG	1 cut(s)	949
PsuI	RGATCY	2 cut(s)	721, 1204
PvuII	CAGCTG	1 cut(s)	319
RsaI	GTAC	7 cut(s)	427, 559, 646, 689, 1329, 1687, 2021
RsaNI	GTAC	7 cut(s)	426, 558, 645, 688, 1328, 1686, 2020
RseI	CAYNNNNRTG	1 cut(s)	526
Rsr2I	CGGWCCG	1 cut(s)	1252
RsrII	CGGWCCG	1 cut(s)	1252
SacI	GAGCTC	1 cut(s)	2048
SaqAI	TTAA	7 cut(s)	360, 1173, 1452, 1626, 1736, 1869, 1887
SatI	GCNGC	3 cut(s)	404, 504, 1126
Sau3AI	GATC	4 cut(s)	721, 1204, 1294, 2050
Sau96I	GGNCC	4 cut(s)	197, 405, 1252, 1631
ScaI	AGTACT	1 cut(s)	559
SchI	GAGTC	3 cut(s)	146, 1028, 1915
ScrFI	CCNGG	4 cut(s)	195, 408, 409, 1512
SduI	GDGCHC	1 cut(s)	2048
SfaNI	GCATC	2 cut(s)	940, 1461
SfcI	CTRYAG	2 cut(s)	945, 1485
SinI	GGWCC	2 cut(s)	1252, 1631
SmaI	CCCGGG	1 cut(s)	409
SmiMI	CAYNNNNRTG	1 cut(s)	526
SmlI	CTYRAG	2 cut(s)	244, 385
SmoI	CTYRAG	2 cut(s)	244, 385
SpeI	ACTAGT	1 cut(s)	1526
Sse9I	AATT	8 cut(s)	253, 439, 919, 1043, 1218, 1648, 1660, 1723
SsiI	CCGC	4 cut(s)	403, 526, 1255, 1422
SspMI	CTAG	6 cut(s)	24, 873, 1527, 1581, 1602, 1617
SstI	GAGCTC	1 cut(s)	2048
StyD4I	CCNGG	4 cut(s)	193, 406, 407, 1510
TaaI	ACNGT	8 cut(s)	157, 557, 891, 1091, 1352, 1703, 1992, 2019
TaiI	ACGT	2 cut(s)	424, 2012
TaqI	TCGA	3 cut(s)	456, 764, 1270
TaqII	GACCGA	1 cut(s)	779
TasI	AATT	8 cut(s)	253, 439, 919, 1043, 1218, 1648, 1660, 1723
TatI	WGTACW	3 cut(s)	557, 644, 2019
TauI	GCSGC	1 cut(s)	406
TfiI	GAWTC	8 cut(s)	80, 163, 453, 809, 1267, 1742, 1912, 1960
Tru1I	TTAA	7 cut(s)	360, 1173, 1452, 1626, 1736, 1869, 1887
Tru9I	TTAA	7 cut(s)	360, 1173, 1452, 1626, 1736, 1869, 1887
TscAI	CASTG	9 cut(s)	162, 580, 1045, 1357, 1648, 1684, 1708, 1818, 2061
TseFI	GTSAC	2 cut(s)	747, 1024
TseI	GCWGC	2 cut(s)	503, 1125
Tsp45I	GTSAC	2 cut(s)	747, 1024
TspGWI	ACGGA	3 cut(s)	80, 1703, 1743
TspMI	CCCGGG	1 cut(s)	407
TspRI	CASTG	9 cut(s)	162, 580, 1045, 1357, 1648, 1684, 1708, 1818, 2061
Van91I	CCANNNNNTGG	1 cut(s)	1643
VpaK11BI	GGWCC	2 cut(s)	1252, 1631
XapI	RAATTY	3 cut(s)	1648, 1660, 1723
XmaI	CCCGGG	1 cut(s)	407
XmiI	GTMKAC	1 cut(s)	1488
XmnI	GAANNNNTTC	1 cut(s)	594
XspI	CTAG	6 cut(s)	24, 873, 1527, 1581, 1602, 1617
ZraI	GACGTC	1 cut(s)	2010
ZrmI	AGTACT	1 cut(s)	559

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.