Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0010239

Physical Location & Seq

Genomic Coordinates Forward (+)

918782 .. 922919

Gene Structure 4138 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g01030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2823 bp

ATGGCGGAGAAGAACTCAACTCCAACGAACCGAAAAAATATTGGATTTGAGGTCGTGAATTCGAGCAAGTTTTTACCTAATTCTAACAATTATCTTGGGCTTATTTTTGTTGTTTATTTGGGCCTTTGGCCGTATTATGAAAAAAAAATCAGAAACCTCAGAAAAGCCATTTTATTTGTGCAACAACCACATTTCCATCCCCAACCGGGCCAACCCCGAGCAAGTAGGGTTTATCATCACCCGCTCCACCGCGAAACTCCCATGCTCCTCCACGTCCAAATGGGTGGCGCCAGCAATCGTTTCTTCACCATCCTCTCCACCACCACCACCACCACCACCAGCAGCCACCCTTTCCACCGCTTCCCTTCTCTCCTCCACCTCTCTCGCCAATACAAACCCCCACTCTTCCCTGCCTCCCTCTCTTCCCTTTCCCACCGTCACTCCCTCCCTTCCCGCCCCTCCTCCTCCGCCTCATCTTTCCCTCCCAGTTCCTCTCACCATTTCCATTCCCACTCCCCCGTTTCCTCCGCCTACCCTTCTTCTTCCGCCGACTCCGCCGGTTTCCGAGCCTCGCACCCCTGGCGCGAGTGGTCCCACCTCCTTAACTCTCTCTCCGCCGCCGGATACAACGGAGTCAACGGCCAAGATGAGTTCACAGCTGCGGTCCGGGATTTGCCCGAGGACTTTATGCGTGCTGCCAGTGTTTGCTTGGCGTTTGCTAGGCAAAGAGCTGGCCTTTTGAGGTTGCTTTCGAGGCGAGATTTAGAGGTTGTGGTGGAGAATGGGACGCCATTTCTGTTCCAGAATGGCGATGATTCGGCGAGGCGAATGAGATTGTTTCTCGGCCAAGGCAGTACCAATGCCTTGGACATTGATAAAGCACAAACGATTGATTTGATGAGATTGATATTGAGTTATGCTAGCAATCCTGTTTTTTCTTCAGAGAGAAACAATCTCTATAATAGAGAAATTGTTGAATCTTCTGTCCGTACTCTGTTGAGTGAAATGGCCAAGCTCTGTTATAGTGCTCCAGATTCAAACTCTATTGGGTCAATGCAGAGTCGATCCTCTGATAACTTTGGAGAATCTGCTAGGCCTTTTGAAAAAACTATTGAAATGAAAAGAGGTGATTGGATTTGCCAGAGGTGTAATTTCATGAACTTTGCAAGAAACATGAAATGCCTTGAGTGCGAGGAGGCACGGCCAAAGAGGGAGCTGACTGGCAAGGAGTGGGAGTGTCCTCAATGTGATTTTTTTAACTATGGGAGAAACATGGTATGTTTGAGGTGTGATTGCAAGCGCCCTGGAGAGGTCTCACGTGGTTCCACTAATGATGGTTTAGATATGGGATATGTAAATATGGGTGATAAAAATACGGCTGATATCGATAGCAGGCTGGCCGCTAATGAAGAGAAGGCACAGCGGTGGTTTAGTAAGATTTCTCAGCTAGACAGTACTTCAGACATGAGTAGCGCTGTATCTGATGAAGATTTTCCTGAAATAATGCCGTTGAGAAAAGGAGTAAACAGATTTGTTGTGAGCACAAGAAAGACTCCATTAGAGAGGAGGCTGGCCAATGCTCAATACCAAAGAAACGTGGATAATGAGGGTAATTACCAAGGCAAGGATCTTCAACCTGGGAGTGTGAATACGTCACTTGGTCGTACACCCAACAGGACTTTAGATGAAATTCTCGGCCGTGTTAATACAAGTACGAATCCCAGACAAAATGTTGGAACTGATACTCCCTCTTCTATATCAAGCTCAGTTTCCTCGGAATATGGACAACCTAGAAGGGGAGGGGGAAATTCCAATTATTCCCAACTTGTGCCATTACCCGCTGATACGTTTGCCAAGAAACCTGAGAATTCGAGTGTGGAGGAGAGTATGCAGCTGTCTGAGAAGCCTACGGAACAGGCTGGGAGCAAGGATGAAGAAAGAGACCAAGCTGAAAAATCTGAGAGATGGTTTAAGAGGGTTGCAGAGTTGCACGATGTTACTGATCTTGCAAGTGCAATTTCAGATGAGGACTTTCCTGAAATTATGCCGATGCGTAAAGGAGAAAATCGATTTGTTGTCAGCAAAAAGAAAGATCGGTCTTTGACTACTCCGGCATACAAGAGACCTACAGCTACTGAACAAGCTAACAATGGCAATTATGTTCCCTTCGTCCCATTCCCACCCGACTACTTTGCTAAAAAAAAGAACCAGCAGACAGATTTGACTAACAAGATTGCTGATGAAACAACTTCAACTACAATGCCAGATAACTCTTCAGACAGTTTGCTTGATGCTAGACCTCACGTGCAACAGGTGAAAAATCAGCAAAGCAATGTGCCAAGCTGGAATTCAGAAAATTCGGGACAAAACCAGTTCAGGGATTCAGCCCCAAATTTTGCTAGTTCTAGCTCATACGGCATGGATAGATTGAACATTGGATCTTCCGGGAAAGAGAAGTCTAACCAGACAGCAAGTTCAACAGGAAATTCACCGCAGCAGTCCAATGATCAGAACATTAGACAGGGCTGGAGTGGGAAAAGCTTGGAGGGGTCAGCAGTGAAGGAACCAGATCCTTTAGACATGTCAGAGGAGGCGAAGGCAGAGAGATGGTTCAAGCGCGTTGCGCAGATAAAAGACATCTCAGAGCTGAGTCAGATTCCCGATGAAGATTTCCCGTCAATAATGCCAATGCGTAAAGGGGTGAATAGGTTTGTTGTCAGCAAGCGGAAAACGCCGTTGGAGAGGAGGTTGACATCTCCACAATACAGAAAGAATCTTCCTATTGTAAGCTCTGATCCAGCAAAGGAAAGAGACAGTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ribosomal_L24e zf-RanBP

Protein Analysis

941

Amino Acids

105.51

Weight (kDa)

8.89

Isoelectric Point (pI)

51.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	375 - 401	2.5e-06	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17790
fragaria_vesca	FvH4_2g05470
malus_domestica	MD12G1012900.v1.1 MD14G1010700.v1.1
prunus_persica	Prupe.7G017200_v2.0.a1
pyrus_communis	pycom05g28400 pycom12g01030 pycom14g00910
rosa_chinensis	RchiOBHm_Chr3g0495901
rosa_laevigata	RLG00000022581
rosa_multiflora	Rmu_co8376015.1_g000001 Rmu_co8410629.1_g000001
rosa_roxburghii	Rroxscaffold_6G00389920
rosa_rugosa	Rorug03G0276900 Rorug03G0277000 Rorug03G0277100
rosa_samantha	Rh3AG324800 Rh3BG360800 Rh3CG357100 Rh3DG359900
rosa_wichuraiana	Rw3G028370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2625
AccB1I	GGYRCC	1 cut(s)	287
AccBSI	CCGCTC	1 cut(s)	244
AccII	CGCG	3 cut(s)	252, 585, 2619
AclWI	GGATC	5 cut(s)	1059, 1635, 2446, 2564, 2789
AcoI	YGGCCR	8 cut(s)	128, 640, 844, 1008, 1202, 1398, 1572, 1696
AcsI	RAATTY	8 cut(s)	58, 1689, 1807, 1867, 2347, 2356, 2392, 2485
AcuI	CTGAAG	3 cut(s)	924, 1443, 2259
AcvI	CACGTG	2 cut(s)	1319, 2305
AcyI	GRCGYC	2 cut(s)	288, 788
AfaI	GTAC	5 cut(s)	856, 991, 1456, 1666, 1714
AfeI	AGCGCT	1 cut(s)	1474
AfiI	CCNNNNNNNGG	5 cut(s)	206, 1309, 1624, 1796, 2377
AflIII	ACRYGT	1 cut(s)	2580
AgsI	TTSAA	9 cut(s)	977, 1038, 1103, 1115, 1634, 2253, 2431, 2478, 2614
AjiI	CACGTC	1 cut(s)	274
AjnI	CCWGG	3 cut(s)	578, 1303, 1636
AjuI	GAANNNNNNNTTGG	4 cut(s)	2332, 2364, 2720, 2752
AleI	CACNNNNGTG	1 cut(s)	1423
AloI	GAACNNNNNNTCC	2 cut(s)	1729, 1761
Alw21I	GWGCWC	2 cut(s)	1030, 1544
Alw26I	GTCTC	4 cut(s)	1318, 1935, 2116, 2805
AlwI	GGATC	5 cut(s)	1059, 1635, 2446, 2564, 2789
AlwNI	CAGNNNCTG	2 cut(s)	2135, 2820
Ama87I	CYCGRG	2 cut(s)	216, 677
Aor51HI	AGCGCT	1 cut(s)	1474
ApeKI	GCWGC	5 cut(s)	342, 659, 695, 1891, 2494
ApoI	RAATTY	8 cut(s)	58, 1689, 1807, 1867, 2347, 2356, 2392, 2485
Asp700I	GAANNNNTTC	1 cut(s)	1491
AspLEI	GCGC	6 cut(s)	290, 585, 1302, 1475, 2619, 2626
AspS9I	GGNCC	4 cut(s)	121, 208, 591, 664
AsuC2I	CCSGG	3 cut(s)	207, 668, 2446
AsuHPI	GGTGA	8 cut(s)	230, 298, 488, 1139, 1376, 2326, 2481, 2713
AsuNHI	GCTAGC	1 cut(s)	920
AvaI	CYCGRG	2 cut(s)	216, 677
AvaII	GGWCC	2 cut(s)	591, 664
BalI	TGGCCA	2 cut(s)	1010, 1574
BanI	GGYRCC	1 cut(s)	287
BbrPI	CACGTG	2 cut(s)	1319, 2305
Bbv12I	GWGCWC	2 cut(s)	1030, 1544
BbvI	GCAGC	5 cut(s)	354, 646, 682, 1903, 2506
BccI	CCATC	5 cut(s)	204, 317, 1328, 1959, 2601
BceAI	ACGGC	8 cut(s)	115, 655, 1217, 1392, 1492, 1683, 2431, 2719
BcgI	CGANNNNNNTGC	2 cut(s)	2174, 2208
BciT130I	CCWGG	3 cut(s)	580, 1305, 1638
BciVI	GTATCC	1 cut(s)	617
BclI	TGATCA	1 cut(s)	2506
BcnI	CCSGG	3 cut(s)	207, 668, 2446
BcoDI	GTCTC	4 cut(s)	1318, 1935, 2116, 2805
BfaI	CTAG	8 cut(s)	720, 921, 1092, 1448, 1791, 2295, 2400, 2406
BfmI	CTRYAG	1 cut(s)	2127
BfoI	RGCGCY	3 cut(s)	291, 1303, 1476
BfuI	GTATCC	1 cut(s)	617
BisI	GCNGC	7 cut(s)	343, 618, 660, 696, 1401, 1892, 2495
BlsI	GCNGC	7 cut(s)	344, 619, 661, 697, 1402, 1893, 2496
BmcAI	AGTACT	1 cut(s)	1456
Bme1390I	CCNGG	6 cut(s)	207, 580, 668, 1305, 1638, 2446
Bme18I	GGWCC	2 cut(s)	591, 664
BmeT110I	CYCGRG	2 cut(s)	216, 677
BmgBI	CACGTC	1 cut(s)	274
BmgT120I	GGNCC	4 cut(s)	121, 208, 591, 664
BmiI	GGNNCC	4 cut(s)	289, 593, 1324, 2565
BmrFI	CCNGG	6 cut(s)	207, 580, 668, 1305, 1638, 2446
BmrI	ACTGGG	1 cut(s)	480
BmsI	GCATC	2 cut(s)	2040, 2281
BmtI	GCTAGC	1 cut(s)	924
BmuI	ACTGGG	1 cut(s)	480
BplI	GAGNNNNNCTC	1 cut(s)	31
BpmI	CTGGAG	3 cut(s)	1014, 1326, 2548
BpuEI	CTTGAG	1 cut(s)	1205
BpuMI	CCSGG	3 cut(s)	207, 668, 2446
Bsa29I	ATCGAT	2 cut(s)	1386, 2068
BsaAI	YACGTR	2 cut(s)	1319, 2305
BsaHI	GRCGYC	2 cut(s)	288, 788
BsaI	GGTCTC	3 cut(s)	1318, 1935, 2116
BsaJI	CCNNGG	8 cut(s)	578, 678, 847, 864, 1303, 1618, 1637, 1773
Bsc4I	CCNNNNNNNGG	5 cut(s)	206, 1309, 1624, 1796, 2377
Bse118I	RCCGGY	1 cut(s)	557
Bse1I	ACTGG	4 cut(s)	486, 699, 1225, 2371
Bse3DI	GCAATG	1 cut(s)	2338
BseBI	CCWGG	3 cut(s)	580, 1305, 1638
BseCI	ATCGAT	2 cut(s)	1386, 2068
BseDI	CCNNGG	8 cut(s)	578, 678, 847, 864, 1303, 1618, 1637, 1773
BseGI	GGATG	3 cut(s)	196, 309, 1936
BseLI	CCNNNNNNNGG	5 cut(s)	206, 1309, 1624, 1796, 2377
BseMI	GCAATG	1 cut(s)	2338
BseMII	CTCAG	8 cut(s)	172, 1457, 1779, 1854, 1890, 1950, 2639, 2655
BseNI	ACTGG	4 cut(s)	486, 699, 1225, 2371
BseRI	GAGGAG	9 cut(s)	257, 362, 451, 454, 1208, 1579, 1895, 2603, 2758
BseX3I	CGGCCG	1 cut(s)	1696
BseXI	GCAGC	5 cut(s)	354, 646, 682, 1903, 2506
BseYI	CCCAGC	1 cut(s)	1919
Bsh1236I	CGCG	3 cut(s)	252, 585, 2619
Bsh1285I	CGRYCG	1 cut(s)	1699
BshNI	GGYRCC	1 cut(s)	287
BshVI	ATCGAT	2 cut(s)	1386, 2068
BsiEI	CGRYCG	1 cut(s)	1699
BsiHKAI	GWGCWC	2 cut(s)	1030, 1544
BsiHKCI	CYCGRG	2 cut(s)	216, 677
BsiSI	CCGG	6 cut(s)	206, 558, 621, 667, 2111, 2445
BslFI	GGGAC	4 cut(s)	577, 799, 2156, 2376
BslI	CCNNNNNNNGG	5 cut(s)	206, 1309, 1624, 1796, 2377
BsmAI	GTCTC	4 cut(s)	1318, 1935, 2116, 2805
BsmFI	GGGAC	4 cut(s)	577, 799, 2156, 2376
Bso31I	GGTCTC	3 cut(s)	1318, 1935, 2116
BsoBI	CYCGRG	2 cut(s)	216, 677
Bsp1286I	GDGCHC	2 cut(s)	1030, 1544
Bsp143I	GATC	8 cut(s)	1064, 1627, 2002, 2092, 2438, 2506, 2569, 2794
BspCNI	CTCAG	8 cut(s)	171, 1456, 1778, 1855, 1891, 1951, 2640, 2654
BspDI	ATCGAT	2 cut(s)	1386, 2068
BspFNI	CGCG	3 cut(s)	252, 585, 2619
BspHI	TCATGA	1 cut(s)	1155
BspLI	GGNNCC	4 cut(s)	289, 593, 1324, 2565
BspOI	GCTAGC	1 cut(s)	924
BspPI	GGATC	5 cut(s)	1059, 1635, 2446, 2564, 2789
BspT107I	GGYRCC	1 cut(s)	287
BspTNI	GGTCTC	3 cut(s)	1318, 1935, 2116
BsrBI	CCGCTC	1 cut(s)	244
BsrDI	GCAATG	1 cut(s)	2338
BsrFI	RCCGGY	1 cut(s)	557
BsrI	ACTGG	4 cut(s)	486, 699, 1225, 2371
BssAI	RCCGGY	1 cut(s)	557
BssECI	CCNNGG	8 cut(s)	578, 678, 847, 864, 1303, 1618, 1637, 1773
BssMI	GATC	8 cut(s)	1064, 1627, 2002, 2092, 2438, 2506, 2569, 2794
BssNI	GRCGYC	2 cut(s)	288, 788
BssT1I	CCWWGG	3 cut(s)	847, 864, 1618
Bst2UI	CCWGG	3 cut(s)	580, 1305, 1638
Bst4CI	ACNGT	4 cut(s)	437, 1454, 2282, 2816
Bst6I	CTCTTC	5 cut(s)	410, 427, 1404, 1756, 2278
BstACI	GRCGYC	2 cut(s)	288, 788
BstBAI	YACGTR	2 cut(s)	1319, 2305
BstC8I	GCNNGC	9 cut(s)	292, 693, 733, 922, 1298, 1394, 1398, 1572, 2723
BstDEI	CTNAG	8 cut(s)	158, 1443, 1765, 1863, 1899, 1959, 2641, 2648
BstF5I	GGATG	3 cut(s)	196, 309, 1936
BstFNI	CGCG	3 cut(s)	252, 585, 2619
BstH2I	RGCGCY	3 cut(s)	291, 1303, 1476
BstHHI	GCGC	6 cut(s)	290, 585, 1302, 1475, 2619, 2626
BstKTI	GATC	8 cut(s)	1067, 1630, 2005, 2095, 2441, 2509, 2572, 2797
BstMAI	GTCTC	4 cut(s)	1318, 1935, 2116, 2805
BstMBI	GATC	8 cut(s)	1064, 1627, 2002, 2092, 2438, 2506, 2569, 2794
BstMCI	CGRYCG	1 cut(s)	1699
BstMWI	GCNNNNNNNGC	7 cut(s)	554, 580, 754, 1188, 2415, 2623, 2731
BstNI	CCWGG	3 cut(s)	580, 1305, 1638
BstNSI	RCATGY	1 cut(s)	2584
BstSCI	CCNGG	6 cut(s)	205, 578, 666, 1303, 1636, 2444
BstSFI	CTRYAG	1 cut(s)	2127
BstUI	CGCG	3 cut(s)	252, 585, 2619
BstV1I	GCAGC	5 cut(s)	354, 646, 682, 1903, 2506
BstX2I	RGATCY	3 cut(s)	1627, 2438, 2569
BstXI	CCANNNNNNTGG	2 cut(s)	284, 865
BstYI	RGATCY	3 cut(s)	1627, 2438, 2569
BstZI	CGGCCG	1 cut(s)	1696
Bsu15I	ATCGAT	2 cut(s)	1386, 2068
BsuI	GTATCC	1 cut(s)	617
BsuTUI	ATCGAT	2 cut(s)	1386, 2068
BtgZI	GCGATG	1 cut(s)	825
BtrI	CACGTC	1 cut(s)	274
BtsCI	GGATG	3 cut(s)	196, 309, 1936
BtsI	GCAGTG	1 cut(s)	2562
BtsIMutI	CAGTG	3 cut(s)	706, 2562, 2821
Cac8I	GCNNGC	9 cut(s)	292, 693, 733, 922, 1298, 1394, 1398, 1572, 2723
CaiI	CAGNNNCTG	2 cut(s)	2135, 2820
CciI	TCATGA	1 cut(s)	1155
CfoI	GCGC	6 cut(s)	290, 585, 1302, 1475, 2619, 2626
Cfr10I	RCCGGY	1 cut(s)	557
Cfr13I	GGNCC	4 cut(s)	121, 208, 591, 664
ClaI	ATCGAT	2 cut(s)	1386, 2068
CpoI	CGGWCCG	1 cut(s)	664
CseI	GACGC	1 cut(s)	796
Csp6I	GTAC	5 cut(s)	855, 990, 1455, 1665, 1713
CspI	CGGWCCG	1 cut(s)	664
CviAII	CATG	7 cut(s)	262, 1156, 1174, 1273, 1465, 2419, 2581
CviQI	GTAC	5 cut(s)	855, 990, 1455, 1665, 1713
DdeI	CTNAG	8 cut(s)	158, 1443, 1765, 1863, 1899, 1959, 2641, 2648
DinI	GGCGCC	1 cut(s)	289
DpnI	GATC	8 cut(s)	1066, 1629, 2004, 2094, 2440, 2508, 2571, 2796
DpnII	GATC	8 cut(s)	1064, 1627, 2002, 2092, 2438, 2506, 2569, 2794
EaeI	YGGCCR	8 cut(s)	128, 640, 844, 1008, 1202, 1398, 1572, 1696
EagI	CGGCCG	1 cut(s)	1696
Eam1104I	CTCTTC	5 cut(s)	410, 427, 1404, 1756, 2278
EarI	CTCTTC	5 cut(s)	410, 427, 1404, 1756, 2278
EciI	GGCGGA	6 cut(s)	20, 457, 517, 535, 544, 604
EclXI	CGGCCG	1 cut(s)	1696
Eco130I	CCWWGG	3 cut(s)	847, 864, 1618
Eco147I	AGGCCT	1 cut(s)	1096
Eco31I	GGTCTC	3 cut(s)	1318, 1935, 2116
Eco32I	GATATC	1 cut(s)	1384
Eco47I	GGWCC	2 cut(s)	591, 664
Eco47III	AGCGCT	1 cut(s)	1474
Eco52I	CGGCCG	1 cut(s)	1696
Eco57I	CTGAAG	3 cut(s)	924, 1443, 2259
Eco72I	CACGTG	2 cut(s)	1319, 2305
Eco88I	CYCGRG	2 cut(s)	216, 677
EcoRI	GAATTC	3 cut(s)	58, 1867, 2347
EcoRII	CCWGG	3 cut(s)	578, 1303, 1636
EcoRV	GATATC	1 cut(s)	1384
EcoT14I	CCWWGG	3 cut(s)	847, 864, 1618
EgeI	GGCGCC	1 cut(s)	289
EheI	GGCGCC	1 cut(s)	289
ErhI	CCWWGG	3 cut(s)	847, 864, 1618
FaeI	CATG	7 cut(s)	265, 1159, 1177, 1276, 1468, 2422, 2584
FaqI	GGGAC	4 cut(s)	577, 799, 2156, 2376
FatI	CATG	7 cut(s)	261, 1155, 1173, 1272, 1464, 2418, 2580
FauI	CCCGC	3 cut(s)	249, 461, 1846
FbaI	TGATCA	1 cut(s)	2506
Fnu4HI	GCNGC	7 cut(s)	343, 618, 660, 696, 1401, 1892, 2495
FokI	GGATG	3 cut(s)	183, 296, 1943
Fsp4HI	GCNGC	7 cut(s)	343, 618, 660, 696, 1401, 1892, 2495
FspBI	CTAG	8 cut(s)	720, 921, 1092, 1448, 1791, 2295, 2400, 2406
FspI	TGCGCA	1 cut(s)	2625
GlaI	GCGC	6 cut(s)	289, 584, 1301, 1474, 2618, 2625
GluI	GCNGC	7 cut(s)	343, 618, 660, 696, 1401, 1892, 2495
GsaI	CCCAGC	1 cut(s)	1923
GsuI	CTGGAG	3 cut(s)	1014, 1326, 2548
HaeII	RGCGCY	3 cut(s)	291, 1303, 1476
HapII	CCGG	6 cut(s)	206, 558, 621, 667, 2111, 2445
HgaI	GACGC	1 cut(s)	796
HhaI	GCGC	6 cut(s)	290, 585, 1302, 1475, 2619, 2626
Hin1I	GRCGYC	2 cut(s)	288, 788
Hin1II	CATG	7 cut(s)	265, 1159, 1177, 1276, 1468, 2422, 2584
Hin6I	GCGC	6 cut(s)	288, 583, 1300, 1473, 2617, 2624
HinP1I	GCGC	6 cut(s)	288, 583, 1300, 1473, 2617, 2624
HincII	GTYRAC	2 cut(s)	637, 2751
HindII	GTYRAC	2 cut(s)	637, 2751
HindIII	AAGCTT	1 cut(s)	2539
HpaII	CCGG	6 cut(s)	206, 558, 621, 667, 2111, 2445
HphI	GGTGA	8 cut(s)	230, 298, 488, 1139, 1376, 2326, 2481, 2713
Hpy166II	GTNNAC	5 cut(s)	637, 654, 1525, 1667, 2751
Hpy188III	TCNNGA	8 cut(s)	55, 802, 1031, 1156, 1496, 2036, 2361, 2660
Hpy8I	GTNNAC	5 cut(s)	637, 654, 1525, 1667, 2751
HpyAV	CCTTC	8 cut(s)	375, 459, 546, 1408, 1788, 2176, 2554, 2590
HpyCH4III	ACNGT	4 cut(s)	437, 1454, 2282, 2816
HpyCH4IV	ACGT	6 cut(s)	273, 1318, 1596, 1652, 1847, 2304
HpyF10VI	GCNNNNNNNGC	7 cut(s)	554, 580, 754, 1188, 2415, 2623, 2731
HpyF3I	CTNAG	8 cut(s)	158, 1443, 1765, 1863, 1899, 1959, 2641, 2648
HpySE526I	ACGT	6 cut(s)	273, 1318, 1596, 1652, 1847, 2304
Hsp92I	GRCGYC	2 cut(s)	288, 788
Hsp92II	CATG	7 cut(s)	265, 1159, 1177, 1276, 1468, 2422, 2584
HspAI	GCGC	6 cut(s)	288, 583, 1300, 1473, 2617, 2624
KasI	GGCGCC	1 cut(s)	287
Ksp22I	TGATCA	1 cut(s)	2506
Kzo9I	GATC	8 cut(s)	1064, 1627, 2002, 2092, 2438, 2506, 2569, 2794
LmnI	GCTCC	5 cut(s)	249, 270, 1033, 1213, 1923
Lsp1109I	GCAGC	5 cut(s)	354, 646, 682, 1903, 2506
LweI	GCATC	2 cut(s)	2040, 2281
MaeI	CTAG	8 cut(s)	720, 921, 1092, 1448, 1791, 2295, 2400, 2406
MaeII	ACGT	6 cut(s)	273, 1318, 1596, 1652, 1847, 2304
MaeIII	GTNAC	4 cut(s)	437, 1653, 1996, 2816
MalI	GATC	8 cut(s)	1066, 1629, 2004, 2094, 2440, 2508, 2571, 2796
MbiI	CCGCTC	1 cut(s)	244
MboI	GATC	8 cut(s)	1064, 1627, 2002, 2092, 2438, 2506, 2569, 2794
MflI	RGATCY	3 cut(s)	1627, 2438, 2569
MhlI	GDGCHC	2 cut(s)	1030, 1544
MlsI	TGGCCA	2 cut(s)	1010, 1574
MluNI	TGGCCA	2 cut(s)	1010, 1574
Mly113I	GGCGCC	1 cut(s)	288
MlyI	GAGTC	5 cut(s)	545, 642, 1069, 1546, 2659
MmeI	TCCRAC	3 cut(s)	47, 1714, 2718
Mox20I	TGGCCA	2 cut(s)	1010, 1574
MroXI	GAANNNNTTC	1 cut(s)	1491
MscI	TGGCCA	2 cut(s)	1010, 1574
MseI	TTAA	4 cut(s)	603, 1257, 1704, 1971
MslI	CAYNNNNRTG	1 cut(s)	1423
Msp20I	TGGCCA	2 cut(s)	1010, 1574
MspA1I	CMGCKG	4 cut(s)	659, 1423, 1841, 1894
MspI	CCGG	6 cut(s)	206, 558, 621, 667, 2111, 2445
MspR9I	CCNGG	6 cut(s)	207, 580, 668, 1305, 1638, 2446
MvaI	CCWGG	3 cut(s)	580, 1305, 1638
MvnI	CGCG	3 cut(s)	252, 585, 2619
MwoI	GCNNNNNNNGC	7 cut(s)	554, 580, 754, 1188, 2415, 2623, 2731
NarI	GGCGCC	1 cut(s)	288
NciI	CCSGG	3 cut(s)	207, 668, 2446
NdeII	GATC	8 cut(s)	1064, 1627, 2002, 2092, 2438, 2506, 2569, 2794
NheI	GCTAGC	1 cut(s)	920
NlaIII	CATG	7 cut(s)	265, 1159, 1177, 1276, 1468, 2422, 2584
NlaIV	GGNNCC	4 cut(s)	289, 593, 1324, 2565
NmeAIII	GCCGAG	2 cut(s)	822, 1674
NmuCI	GTSAC	3 cut(s)	437, 1653, 2816
NsbI	TGCGCA	1 cut(s)	2625
NspI	RCATGY	1 cut(s)	2584
OliI	CACNNNNGTG	1 cut(s)	1423
PagI	TCATGA	1 cut(s)	1155
PceI	AGGCCT	1 cut(s)	1096
PciI	ACATGT	1 cut(s)	2580
PdmI	GAANNNNTTC	1 cut(s)	1491
PfeI	GAWTC	8 cut(s)	815, 977, 1034, 1085, 1717, 2381, 2656, 2773
PfoI	TCCNGGA	2 cut(s)	666, 2444
PkrI	GCNGC	7 cut(s)	344, 619, 661, 697, 1402, 1893, 2496
PleI	GAGTC	5 cut(s)	545, 641, 1068, 1546, 2658
PluTI	GGCGCC	1 cut(s)	291
PmaCI	CACGTG	2 cut(s)	1319, 2305
PmlI	CACGTG	2 cut(s)	1319, 2305
PpsI	GAGTC	5 cut(s)	545, 641, 1068, 1546, 2658
Ppu21I	YACGTR	2 cut(s)	1319, 2305
PscI	ACATGT	1 cut(s)	2580
Psp6I	CCWGG	3 cut(s)	578, 1303, 1636
PspCI	CACGTG	2 cut(s)	1319, 2305
PspFI	CCCAGC	1 cut(s)	1919
PspGI	CCWGG	3 cut(s)	578, 1303, 1636
PspN4I	GGNNCC	4 cut(s)	289, 593, 1324, 2565
PspPI	GGNCC	4 cut(s)	121, 208, 591, 664
PstNI	CAGNNNCTG	2 cut(s)	2135, 2820
PsuI	RGATCY	3 cut(s)	1627, 2438, 2569
PvuII	CAGCTG	2 cut(s)	659, 1894
RsaI	GTAC	5 cut(s)	856, 991, 1456, 1666, 1714
RsaNI	GTAC	5 cut(s)	855, 990, 1455, 1665, 1713
RseI	CAYNNNNRTG	1 cut(s)	1423
Rsr2I	CGGWCCG	1 cut(s)	664
RsrII	CGGWCCG	1 cut(s)	664
SaqAI	TTAA	4 cut(s)	603, 1257, 1704, 1971
SatI	GCNGC	7 cut(s)	343, 618, 660, 696, 1401, 1892, 2495
Sau3AI	GATC	8 cut(s)	1064, 1627, 2002, 2092, 2438, 2506, 2569, 2794
Sau96I	GGNCC	4 cut(s)	121, 208, 591, 664
ScaI	AGTACT	1 cut(s)	1456
SchI	GAGTC	5 cut(s)	545, 642, 1069, 1546, 2659
ScrFI	CCNGG	6 cut(s)	207, 580, 668, 1305, 1638, 2446
SduI	GDGCHC	2 cut(s)	1030, 1544
SfaNI	GCATC	2 cut(s)	2040, 2281
SfcI	CTRYAG	1 cut(s)	2127
SfoI	GGCGCC	1 cut(s)	289
SinI	GGWCC	2 cut(s)	591, 664
SmiMI	CAYNNNNRTG	1 cut(s)	1423
SmlI	CTYRAG	1 cut(s)	1184
SmoI	CTYRAG	1 cut(s)	1184
SseBI	AGGCCT	1 cut(s)	1096
SspDI	GGCGCC	1 cut(s)	287
SspI	AATATT	1 cut(s)	40
SspMI	CTAG	8 cut(s)	720, 921, 1092, 1448, 1791, 2295, 2400, 2406
StuI	AGGCCT	1 cut(s)	1096
StyD4I	CCNGG	6 cut(s)	205, 578, 666, 1303, 1636, 2444
StyI	CCWWGG	3 cut(s)	847, 864, 1618
TaaI	ACNGT	4 cut(s)	437, 1454, 2282, 2816
TaiI	ACGT	6 cut(s)	276, 1321, 1599, 1655, 1850, 2307
TaqI	TCGA	6 cut(s)	62, 752, 1063, 1386, 1871, 2068
TaqII	GACCGA	1 cut(s)	2085
TatI	WGTACW	1 cut(s)	1454
TauI	GCSGC	2 cut(s)	620, 1403
TfiI	GAWTC	8 cut(s)	815, 977, 1034, 1085, 1717, 2381, 2656, 2773
Tru1I	TTAA	4 cut(s)	603, 1257, 1704, 1971
Tru9I	TTAA	4 cut(s)	603, 1257, 1704, 1971
TscAI	CASTG	3 cut(s)	706, 2562, 2821
TseFI	GTSAC	3 cut(s)	437, 1653, 2816
TseI	GCWGC	5 cut(s)	342, 659, 695, 1891, 2494
Tsp45I	GTSAC	3 cut(s)	437, 1653, 2816
TspGWI	ACGGA	3 cut(s)	645, 977, 1925
TspRI	CASTG	3 cut(s)	706, 2562, 2821
VpaK11BI	GGWCC	2 cut(s)	591, 664
XapI	RAATTY	8 cut(s)	58, 1689, 1807, 1867, 2347, 2356, 2392, 2485
XceI	RCATGY	1 cut(s)	2584
XcmI	CCANNNNNNNNNTGG	1 cut(s)	706
XmnI	GAANNNNTTC	1 cut(s)	1491
XspI	CTAG	8 cut(s)	720, 921, 1092, 1448, 1791, 2295, 2400, 2406
ZrmI	AGTACT	1 cut(s)	1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.