Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010239

Physical Location & Seq

Genomic Coordinates Reverse (-)

46117277 .. 46121058

Gene Structure 3782 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ45824

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2559 bp

ATGGGTGGTGCTAGCAACAGGTTCTTGAGCCTACTCTCCACCACGACGCACCCTTTGCCTCTTCATCTCCACCACCGCTTCCCTTGTCTCCTCCTCCTCCGCCTGTCCCGCCGCTCGTCCAGTCCCCAACTCTTGTCTCGCCTTCATCATTCTACTCTCTCTTGTCGCTCCTCCTCTTTTACTAGTCTCAAATCCTCCCATCATGTTCATTTCCACTCCAACGCCTCTCCAGTTTCCCCTGCCTACCCTTCTGCCGACCCACCCCTGCACCCCTGGCCGGAGTGGTCGCACCTGCTTAATGCTCTCTCTGCCGCCGGTTATGATGAAGTCCACGGCCACGACGTCTTCACCGGGGATTTGCCCGACCACTTTGTGCGCGCTGCCCGTGTTTGTTTGGCCTTCGCCACCGCACGACCTAGCCTTTTGAGGTTGCTTTCTTGGAGAGATTTAGAGGTTGTGGTGGAGAATGGGACGCCGTTTTTGTTCCAGAATGGTGGTGATGAATCAGCCCGGAGGATGACCTCATTTCTCGCCCAAGGCTCTACAAATGCCTTCGATACTGATAAAGCACAAACGGTTGATTTGATGAGATTTATATTGAGTTATGCTAGCACTCCTGTTTTTTCTTCAGAGCAAAACAACCTCTACAATAGAGAACTTGTTGAATCATCTGTCCGTAATCTGTTGAAAGAAATGGCGAAGCTTTGTTATAGCGCTCCAGAGTCTAACTCTTTTGGGACAGTGCAGAATCAAAGTTCTAATAATCATGGAGCAACTCCTGGGCCTTTTGGCAAAACTATTGAAATGAAAAGAGGCGACTGGATTTGCTCAAGGTGCAATTTCATGAACTTCGCAAAAAACATGAAATGCCTTGAATGCAATGAGGCAAAGCCACACAGACAGCTGACTGGCAGAGAGTGGGAGTGTCCTCAATGTGATTTTTTTAACTACGGGAGAAACATGGTATGCTTGAGGTGTGATTGCAAGCGGCCTGGGGAGGTCTCACGTGGTACCACTAAAACTAATTTAGATATTGGATTCAACAATGGAGATTATACAAATAAAGCTGATATCAATAGCAGGCTGGCTGCCAATGAAGAGAAGGCACAGCGGTGGTTTAGTAAGATTTCTCAGTTAGACAGTACTTCAGACATGAGCAGTGCAATATCAGATGAAGATTTTCCTGAAATAATGCCATTGAGGAAAGGAGTAAATAGATTTGTTGTGAGTACAAGGAAGACACCATTAGAGAGGAGGCTGGCAAATGCCCAGTACCAAAGAAGCTTGGACACTGATGAAATCAAGGATCTCCAAAAGGGGAGTGCAAATAAGTCACTTGGTGCTACATCGAGCCAGACTTTAGATACTATTCTCGGTCGTTCATCTGTTTCTGAATCAAATACTACCAATACCAATGCTGGAGAACATGATGCGTTTGCTAAGAAACCTGAGACTTCATATATGGAGGAGAGTGGGAAGTTAGTGAGTGACCAAAATGAGTCCGTCACTTTGAAGGGCAGTGAATTGGAAGGTGTTTCTGGGAACAATCAATCTGGTAAATCAGAAGACAGTCTGATATCTGCAAAGTCTATGAAACAAGCTGGCAGCAGGAATGAAGAAACGGAACAAGCTGAAAAATCTGAGAGATGGTTTAAGAGGGTTGCAGAGTTGCATGATGTTACAGATCTTGCAAGTGCAATTTCCGATGAGGACTTCCCTGAAATCATGCCGGTCCGCAAAGGAGAGAATCGATTTATGGTCAGCAAGAAGAAAGATCGTTCTTCGTCTTCTCCAGCATACAAGAGAGGTACAGCTATGGAACAACCTAACAGTGCCAACTATGTTCCCTTCGTTCCCTTCCCACCTGACTACTTTGCTAAAGTTGACAATCCACAGACAAGCGGGACAGCTTTGGATAACAAGACTGGTGTTAAGTCAACTCCAACCATGATGCCAGAGAACCCTGTAGACAAATCGTTTGACACAAGACCTGGGACGCTGAATACTGGTCATAGTCAACAGATGGAAAGTCAGCAAAGCCGTGTTGCCAACTTGAAATCTAGATCTTCTGAAGACAATCCTAGAAAGGAATGGACTAGCTCTGTTAATGGACCCCCAGCCAGTGGAAATTCTGCCCTGAATTTTGCTAATACTACCACTGATAGTACGGACAGATTGAACAGTGGATCTTCAGGGAAAGAGAATTTTGATGAGTTAATGGATTCGCACCATCTGTCCAATGAACAGAACATTAGACAGCGCTGGACTGGGAAGAGTTTGGAGGGGTCAGCAGTGAAGGAACCGAATCCTTTAGATATGTCAGAGGAGGCAAAGGCAGAGAGATGGTTTAAGCGTGTTGCTCAGATTAAAGACATATCAGAGCTGAGTCAGATTCCTGATGAAGATTTTCCATCAATAATGCCAATGCGTAAAGGAGTGAATCGGTTTGTGGTCAGCAAGAGGAAAACACCGTTGGAGAGGAGGTTGACATCTCCACAGTACAGAAAAAGCCTTCCTATTGTGAGCTCTGATCCAGTGAAGGAAGATGATGGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ribosomal_L24e zf-RanBP

Protein Analysis

852

Amino Acids

94.89

Weight (kDa)

7.32

Isoelectric Point (pI)

50.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	271 - 293	2.1e-06	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17790
fragaria_vesca	FvH4_2g05470
malus_domestica	MD12G1012900.v1.1 MD14G1010700.v1.1
prunus_persica	Prupe.7G017200_v2.0.a1
pyrus_communis	pycom05g28400 pycom12g01030 pycom14g00910
rosa_chinensis	RchiOBHm_Chr3g0495901
rosa_laevigata	RLG00000022581
rosa_multiflora	Rmu_co8376015.1_g000001 Rmu_co8410629.1_g000001
rosa_roxburghii	Rroxscaffold_6G00389920
rosa_rugosa	Rorug03G0276900 Rorug03G0277000 Rorug03G0277100
rosa_samantha	Rh3AG324800 Rh3BG360800 Rh3CG357100 Rh3DG359900
rosa_wichuraiana	Rw3G028370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	300
AatII	GACGTC	1 cut(s)	345
Acc36I	ACCTGC	1 cut(s)	300
Acc65I	GGTACC	1 cut(s)	1010
AccB1I	GGYRCC	1 cut(s)	1010
AccB7I	CCANNNNNTGG	1 cut(s)	2123
AccBSI	CCGCTC	1 cut(s)	114
AccI	GTMKAC	1 cut(s)	1968
AccII	CGCG	1 cut(s)	378
AclWI	GGATC	3 cut(s)	1314, 2194, 2525
AcoI	YGGCCR	2 cut(s)	275, 334
AcsI	RAATTY	3 cut(s)	2128, 2140, 2203
AcuI	CTGAAG	4 cut(s)	612, 1131, 2091, 2175
AcvI	CACGTG	1 cut(s)	1007
AcyI	GRCGYC	2 cut(s)	342, 473
AdeI	CACNNNGTG	2 cut(s)	373, 1340
AfaI	GTAC	7 cut(s)	1012, 1144, 1231, 1274, 1810, 2167, 2501
AfeI	AGCGCT	2 cut(s)	715, 2261
AfiI	CCNNNNNNNGG	2 cut(s)	277, 2123
AgsI	TTSAA	8 cut(s)	665, 688, 803, 875, 1042, 1513, 2056, 2179
AhlI	ACTAGT	1 cut(s)	182
AjnI	CCWGG	4 cut(s)	272, 778, 991, 1990
AjuI	GAANNNNNNNTTGG	2 cut(s)	2456, 2488
AleI	CACNNNNGTG	1 cut(s)	1111
Alw21I	GWGCWC	1 cut(s)	2528
Alw26I	GTCTC	5 cut(s)	92, 141, 191, 1006, 1445
AlwI	GGATC	3 cut(s)	1314, 2194, 2525
Aor51HI	AGCGCT	2 cut(s)	715, 2261
AoxI	GGCC	5 cut(s)	275, 334, 396, 782, 989
ApeKI	GCWGC	3 cut(s)	380, 1088, 1605
ApoI	RAATTY	3 cut(s)	2128, 2140, 2203
ArsI	GACNNNNNNTTYG	6 cut(s)	37, 69, 463, 495, 1961, 1993
Asp700I	GAANNNNTTC	2 cut(s)	1179, 2406
Asp718I	GGTACC	1 cut(s)	1010
AspLEI	GCGC	4 cut(s)	378, 380, 716, 2262
AspS9I	GGNCC	3 cut(s)	782, 1732, 2111
AsuC2I	CCSGG	2 cut(s)	352, 511
AsuHPI	GGTGA	2 cut(s)	340, 509
AsuNHI	GCTAGC	2 cut(s)	11, 608
AvaII	GGWCC	2 cut(s)	1732, 2111
BanI	GGYRCC	1 cut(s)	1010
BanII	GRGCYC	1 cut(s)	2528
BbrPI	CACGTG	1 cut(s)	1007
BbsI	GAAGAC	5 cut(s)	337, 1244, 1572, 1779, 2079
Bbv12I	GWGCWC	1 cut(s)	2528
BbvI	GCAGC	3 cut(s)	367, 1075, 1617
BccI	CCATC	7 cut(s)	207, 1641, 2017, 2238, 2337, 2419, 2543
BceAI	ACGGC	3 cut(s)	349, 460, 2025
BciT130I	CCWGG	4 cut(s)	274, 780, 993, 1992
BcnI	CCSGG	2 cut(s)	352, 511
BcoDI	GTCTC	5 cut(s)	92, 141, 191, 1006, 1445
BcuI	ACTAGT	1 cut(s)	182
BfaI	CTAG	7 cut(s)	12, 183, 417, 609, 2061, 2082, 2097
BfmI	CTRYAG	1 cut(s)	1965
BfoI	RGCGCY	2 cut(s)	717, 2263
BfuAI	ACCTGC	1 cut(s)	300
BglII	AGATCT	2 cut(s)	1684, 2063
BisI	GCNGC	6 cut(s)	112, 312, 381, 989, 1089, 1606
BlsI	GCNGC	6 cut(s)	113, 313, 382, 990, 1090, 1607
BmcAI	AGTACT	1 cut(s)	1144
Bme1390I	CCNGG	6 cut(s)	274, 352, 511, 780, 993, 1992
Bme18I	GGWCC	2 cut(s)	1732, 2111
BmgT120I	GGNCC	3 cut(s)	782, 1732, 2111
BmiI	GGNNCC	3 cut(s)	1012, 2113, 2301
BmrFI	CCNGG	6 cut(s)	274, 352, 511, 780, 993, 1992
BmrI	ACTGGG	2 cut(s)	1264, 2277
BmsI	GCATC	2 cut(s)	1420, 1941
BmtI	GCTAGC	2 cut(s)	15, 612
BmuI	ACTGGG	2 cut(s)	1264, 2277
BpiI	GAAGAC	5 cut(s)	337, 1244, 1572, 1779, 2079
BplI	GAGNNNNNCTC	2 cut(s)	713, 745
BpmI	CTGGAG	4 cut(s)	213, 702, 1440, 1776
BpuEI	CTTGAG	3 cut(s)	46, 814, 991
BpuMI	CCSGG	2 cut(s)	352, 511
Bsa29I	ATCGAT	1 cut(s)	1750
BsaAI	YACGTR	1 cut(s)	1007
BsaHI	GRCGYC	2 cut(s)	342, 473
BsaI	GGTCTC	1 cut(s)	1006
BsaJI	CCNNGG	7 cut(s)	272, 331, 351, 535, 779, 992, 1991
BsaXI	ACNNNNNCTCC	2 cut(s)	2468, 2498
Bsc4I	CCNNNNNNNGG	2 cut(s)	277, 2123
Bse118I	RCCGGY	2 cut(s)	314, 1729
Bse3DI	GCAATG	1 cut(s)	886
BseBI	CCWGG	4 cut(s)	274, 780, 993, 1992
BseCI	ATCGAT	1 cut(s)	1750
BseDI	CCNNGG	7 cut(s)	272, 331, 351, 535, 779, 992, 1991
BseGI	GGATG	1 cut(s)	522
BseLI	CCNNNNNNNGG	2 cut(s)	277, 2123
BseMI	GCAATG	1 cut(s)	886
BseMII	CTCAG	5 cut(s)	1145, 1440, 1632, 2375, 2375
BsePI	GCGCGC	1 cut(s)	376
BseRI	GAGGAG	9 cut(s)	80, 83, 86, 160, 163, 1267, 1481, 2339, 2494
BseXI	GCAGC	3 cut(s)	367, 1075, 1617
BseYI	CCCAGC	1 cut(s)	2116
BsgI	GTGCAG	2 cut(s)	251, 764
Bsh1236I	CGCG	1 cut(s)	378
Bsh1285I	CGRYCG	1 cut(s)	1378
BshFI	GGCC	5 cut(s)	277, 336, 398, 784, 991
BshNI	GGYRCC	1 cut(s)	1010
BshVI	ATCGAT	1 cut(s)	1750
BsiEI	CGRYCG	1 cut(s)	1378
BsiHKAI	GWGCWC	1 cut(s)	2528
BsiSI	CCGG	5 cut(s)	278, 315, 351, 511, 1730
BslFI	GGGAC	6 cut(s)	91, 108, 484, 751, 1918, 2008
BslI	CCNNNNNNNGG	2 cut(s)	277, 2123
BsmAI	GTCTC	5 cut(s)	92, 141, 191, 1006, 1445
BsmFI	GGGAC	6 cut(s)	91, 108, 484, 751, 1918, 2008
BsmI	GAATGC	1 cut(s)	881
BsnI	GGCC	5 cut(s)	277, 336, 398, 784, 991
Bso31I	GGTCTC	1 cut(s)	1006
Bsp1286I	GDGCHC	1 cut(s)	2528
Bsp143I	GATC	6 cut(s)	1306, 1684, 1774, 2063, 2186, 2530
BspANI	GGCC	5 cut(s)	277, 336, 398, 784, 991
BspCNI	CTCAG	5 cut(s)	1144, 1441, 1633, 2374, 2376
BspDI	ATCGAT	1 cut(s)	1750
BspFNI	CGCG	1 cut(s)	378
BspHI	TCATGA	1 cut(s)	843
BspLI	GGNNCC	3 cut(s)	1012, 2113, 2301
BspMI	ACCTGC	1 cut(s)	300
BspOI	GCTAGC	2 cut(s)	15, 612
BspPI	GGATC	3 cut(s)	1314, 2194, 2525
BspT107I	GGYRCC	1 cut(s)	1010
BspTNI	GGTCTC	1 cut(s)	1006
BsrBI	CCGCTC	1 cut(s)	114
BsrDI	GCAATG	1 cut(s)	886
BsrFI	RCCGGY	2 cut(s)	314, 1729
BssAI	RCCGGY	2 cut(s)	314, 1729
BssECI	CCNNGG	7 cut(s)	272, 331, 351, 535, 779, 992, 1991
BssHII	GCGCGC	1 cut(s)	376
BssMI	GATC	6 cut(s)	1306, 1684, 1774, 2063, 2186, 2530
BssNI	GRCGYC	2 cut(s)	342, 473
BssT1I	CCWWGG	1 cut(s)	535
Bst2UI	CCWGG	4 cut(s)	274, 780, 993, 1992
Bst4CI	ACNGT	8 cut(s)	577, 742, 1142, 1571, 1832, 2183, 2472, 2499
Bst6I	CTCTTC	3 cut(s)	66, 1092, 2267
BstACI	GRCGYC	2 cut(s)	342, 473
BstAPI	GCANNNNNTGC	1 cut(s)	55
BstBAI	YACGTR	1 cut(s)	1007
BstC8I	GCNNGC	8 cut(s)	13, 378, 610, 986, 1082, 1086, 1260, 1603
BstDEI	CTNAG	6 cut(s)	1131, 1440, 1449, 1641, 2361, 2384
BstDSI	CCRYGG	1 cut(s)	331
BstF5I	GGATG	1 cut(s)	522
BstFNI	CGCG	1 cut(s)	378
BstH2I	RGCGCY	2 cut(s)	717, 2263
BstHHI	GCGC	4 cut(s)	378, 380, 716, 2262
BstKTI	GATC	6 cut(s)	1309, 1687, 1777, 2066, 2189, 2533
BstMAI	GTCTC	5 cut(s)	92, 141, 191, 1006, 1445
BstMBI	GATC	6 cut(s)	1306, 1684, 1774, 2063, 2186, 2530
BstMCI	CGRYCG	1 cut(s)	1378
BstMWI	GCNNNNNNNGC	6 cut(s)	55, 108, 274, 308, 834, 876
BstNI	CCWGG	4 cut(s)	274, 780, 993, 1992
BstSCI	CCNGG	6 cut(s)	272, 350, 509, 778, 991, 1990
BstSFI	CTRYAG	1 cut(s)	1965
BstUI	CGCG	1 cut(s)	378
BstV1I	GCAGC	3 cut(s)	367, 1075, 1617
BstV2I	GAAGAC	5 cut(s)	337, 1244, 1572, 1779, 2079
BstX2I	RGATCY	4 cut(s)	1306, 1684, 2063, 2186
BstXI	CCANNNNNNTGG	1 cut(s)	494
BstYI	RGATCY	4 cut(s)	1306, 1684, 2063, 2186
Bsu15I	ATCGAT	1 cut(s)	1750
BsuRI	GGCC	5 cut(s)	277, 336, 398, 784, 991
BsuTUI	ATCGAT	1 cut(s)	1750
BtgI	CCRYGG	1 cut(s)	331
BtsCI	GGATG	1 cut(s)	522
BtsI	GCAGTG	3 cut(s)	1165, 1525, 2298
BveI	ACCTGC	1 cut(s)	300
Cac8I	GCNNGC	8 cut(s)	13, 378, 610, 986, 1082, 1086, 1260, 1603
CciI	TCATGA	1 cut(s)	843
CfoI	GCGC	4 cut(s)	378, 380, 716, 2262
Cfr10I	RCCGGY	2 cut(s)	314, 1729
Cfr13I	GGNCC	3 cut(s)	782, 1732, 2111
ClaI	ATCGAT	1 cut(s)	1750
CpoI	CGGWCCG	1 cut(s)	1732
CseI	GACGC	3 cut(s)	55, 481, 2005
Csp6I	GTAC	7 cut(s)	1011, 1143, 1230, 1273, 1809, 2166, 2500
CspI	CGGWCCG	1 cut(s)	1732
CviQI	GTAC	7 cut(s)	1011, 1143, 1230, 1273, 1809, 2166, 2500
DdeI	CTNAG	6 cut(s)	1131, 1440, 1449, 1641, 2361, 2384
DpnI	GATC	6 cut(s)	1308, 1686, 1776, 2065, 2188, 2532
DpnII	GATC	6 cut(s)	1306, 1684, 1774, 2063, 2186, 2530
DraIII	CACNNNGTG	2 cut(s)	373, 1340
EaeI	YGGCCR	2 cut(s)	275, 334
Eam1104I	CTCTTC	3 cut(s)	66, 1092, 2267
EarI	CTCTTC	3 cut(s)	66, 1092, 2267
EciI	GGCGGA	1 cut(s)	89
Ecl136II	GAGCTC	1 cut(s)	2526
Eco130I	CCWWGG	1 cut(s)	535
Eco24I	GRGCYC	1 cut(s)	2528
Eco31I	GGTCTC	1 cut(s)	1006
Eco32I	GATATC	2 cut(s)	1072, 1578
Eco47I	GGWCC	2 cut(s)	1732, 2111
Eco47III	AGCGCT	2 cut(s)	715, 2261
Eco53kI	GAGCTC	1 cut(s)	2526
Eco57I	CTGAAG	4 cut(s)	612, 1131, 2091, 2175
Eco72I	CACGTG	1 cut(s)	1007
EcoICRI	GAGCTC	1 cut(s)	2526
EcoRII	CCWGG	4 cut(s)	272, 778, 991, 1990
EcoRV	GATATC	2 cut(s)	1072, 1578
EcoT14I	CCWWGG	1 cut(s)	535
EcoT38I	GRGCYC	1 cut(s)	2528
ErhI	CCWWGG	1 cut(s)	535
FaqI	GGGAC	6 cut(s)	91, 108, 484, 751, 1918, 2008
FauI	CCCGC	2 cut(s)	116, 1895
FblI	GTMKAC	1 cut(s)	1968
Fnu4HI	GCNGC	6 cut(s)	112, 312, 381, 989, 1089, 1606
FokI	GGATG	1 cut(s)	529
FriOI	GRGCYC	1 cut(s)	2528
Fsp4HI	GCNGC	6 cut(s)	112, 312, 381, 989, 1089, 1606
FspBI	CTAG	7 cut(s)	12, 183, 417, 609, 2061, 2082, 2097
GlaI	GCGC	4 cut(s)	377, 379, 715, 2261
GluI	GCNGC	6 cut(s)	112, 312, 381, 989, 1089, 1606
GsaI	CCCAGC	1 cut(s)	2120
GsuI	CTGGAG	4 cut(s)	213, 702, 1440, 1776
HaeII	RGCGCY	2 cut(s)	717, 2263
HaeIII	GGCC	5 cut(s)	277, 336, 398, 784, 991
HapII	CCGG	5 cut(s)	278, 315, 351, 511, 1730
HgaI	GACGC	3 cut(s)	55, 481, 2005
HhaI	GCGC	4 cut(s)	378, 380, 716, 2262
Hin1I	GRCGYC	2 cut(s)	342, 473
Hin6I	GCGC	4 cut(s)	376, 378, 714, 2260
HinP1I	GCGC	4 cut(s)	376, 378, 714, 2260
HincII	GTYRAC	4 cut(s)	1885, 1938, 2018, 2487
HindII	GTYRAC	4 cut(s)	1885, 1938, 2018, 2487
HindIII	AAGCTT	2 cut(s)	701, 1282
HpaII	CCGG	5 cut(s)	278, 315, 351, 511, 1730
HphI	GGTGA	2 cut(s)	340, 509
Hpy166II	GTNNAC	6 cut(s)	331, 1885, 1938, 1969, 2018, 2487
Hpy188III	TCNNGA	7 cut(s)	25, 487, 719, 844, 1184, 2061, 2396
Hpy8I	GTNNAC	6 cut(s)	331, 1885, 1938, 1969, 2018, 2487
Hpy99I	CGWCG	2 cut(s)	49, 344
HpyCH4III	ACNGT	8 cut(s)	577, 742, 1142, 1571, 1832, 2183, 2472, 2499
HpyCH4IV	ACGT	2 cut(s)	342, 1006
HpyF10VI	GCNNNNNNNGC	6 cut(s)	55, 108, 274, 308, 834, 876
HpyF3I	CTNAG	6 cut(s)	1131, 1440, 1449, 1641, 2361, 2384
HpySE526I	ACGT	2 cut(s)	342, 1006
Hsp92I	GRCGYC	2 cut(s)	342, 473
HspAI	GCGC	4 cut(s)	376, 378, 714, 2260
KpnI	GGTACC	1 cut(s)	1014
Kzo9I	GATC	6 cut(s)	1306, 1684, 1774, 2063, 2186, 2530
LmnI	GCTCC	3 cut(s)	173, 721, 770
Lsp1109I	GCAGC	3 cut(s)	367, 1075, 1617
LweI	GCATC	2 cut(s)	1420, 1941
MaeI	CTAG	7 cut(s)	12, 183, 417, 609, 2061, 2082, 2097
MaeII	ACGT	2 cut(s)	342, 1006
MaeIII	GTNAC	5 cut(s)	1332, 1487, 1504, 1678, 2552
MalI	GATC	6 cut(s)	1308, 1686, 1776, 2065, 2188, 2532
MbiI	CCGCTC	1 cut(s)	114
MboI	GATC	6 cut(s)	1306, 1684, 1774, 2063, 2186, 2530
MflI	RGATCY	4 cut(s)	1306, 1684, 2063, 2186
MhlI	GDGCHC	1 cut(s)	2528
MluCI	AATT	7 cut(s)	838, 1024, 1523, 1698, 2128, 2140, 2203
MlyI	GAGTC	3 cut(s)	731, 1508, 2395
MmeI	TCCRAC	3 cut(s)	243, 1967, 2454
MroXI	GAANNNNTTC	2 cut(s)	1179, 2406
MseI	TTAA	8 cut(s)	297, 945, 1653, 1932, 2106, 2216, 2349, 2367
MslI	CAYNNNNRTG	1 cut(s)	1111
MspA1I	CMGCKG	2 cut(s)	904, 1111
MspI	CCGG	5 cut(s)	278, 315, 351, 511, 1730
MspR9I	CCNGG	6 cut(s)	274, 352, 511, 780, 993, 1992
Mva1269I	GAATGC	1 cut(s)	881
MvaI	CCWGG	4 cut(s)	274, 780, 993, 1992
MvnI	CGCG	1 cut(s)	378
MwoI	GCNNNNNNNGC	6 cut(s)	55, 108, 274, 308, 834, 876
NciI	CCSGG	2 cut(s)	352, 511
NdeII	GATC	6 cut(s)	1306, 1684, 1774, 2063, 2186, 2530
NheI	GCTAGC	2 cut(s)	11, 608
NlaIV	GGNNCC	3 cut(s)	1012, 2113, 2301
NmuCI	GTSAC	3 cut(s)	1332, 1487, 1504
OliI	CACNNNNGTG	1 cut(s)	1111
PagI	TCATGA	1 cut(s)	843
PaqCI	CACCTGC	1 cut(s)	300
PauI	GCGCGC	1 cut(s)	376
PcsI	WCGNNNNNNNCGW	1 cut(s)	339
PctI	GAATGC	1 cut(s)	881
PdmI	GAANNNNTTC	2 cut(s)	1179, 2406
PflMI	CCANNNNNTGG	1 cut(s)	2123
PkrI	GCNGC	6 cut(s)	113, 313, 382, 990, 1090, 1607
PleI	GAGTC	3 cut(s)	730, 1507, 2394
PmaCI	CACGTG	1 cut(s)	1007
PmlI	CACGTG	1 cut(s)	1007
PpsI	GAGTC	3 cut(s)	730, 1507, 2394
Ppu21I	YACGTR	1 cut(s)	1007
Psp124BI	GAGCTC	1 cut(s)	2528
Psp6I	CCWGG	4 cut(s)	272, 778, 991, 1990
PspCI	CACGTG	1 cut(s)	1007
PspFI	CCCAGC	1 cut(s)	2116
PspGI	CCWGG	4 cut(s)	272, 778, 991, 1990
PspN4I	GGNNCC	3 cut(s)	1012, 2113, 2301
PspPI	GGNCC	3 cut(s)	782, 1732, 2111
PsuI	RGATCY	4 cut(s)	1306, 1684, 2063, 2186
PteI	GCGCGC	1 cut(s)	376
PvuII	CAGCTG	1 cut(s)	904
RsaI	GTAC	7 cut(s)	1012, 1144, 1231, 1274, 1810, 2167, 2501
RsaNI	GTAC	7 cut(s)	1011, 1143, 1230, 1273, 1809, 2166, 2500
RseI	CAYNNNNRTG	1 cut(s)	1111
Rsr2I	CGGWCCG	1 cut(s)	1732
RsrII	CGGWCCG	1 cut(s)	1732
SacI	GAGCTC	1 cut(s)	2528
SaqAI	TTAA	8 cut(s)	297, 945, 1653, 1932, 2106, 2216, 2349, 2367
SatI	GCNGC	6 cut(s)	112, 312, 381, 989, 1089, 1606
Sau3AI	GATC	6 cut(s)	1306, 1684, 1774, 2063, 2186, 2530
Sau96I	GGNCC	3 cut(s)	782, 1732, 2111
ScaI	AGTACT	1 cut(s)	1144
SchI	GAGTC	3 cut(s)	731, 1508, 2395
ScrFI	CCNGG	6 cut(s)	274, 352, 511, 780, 993, 1992
SduI	GDGCHC	1 cut(s)	2528
SfaNI	GCATC	2 cut(s)	1420, 1941
SfcI	CTRYAG	1 cut(s)	1965
SinI	GGWCC	2 cut(s)	1732, 2111
SmiMI	CAYNNNNRTG	1 cut(s)	1111
SmlI	CTYRAG	3 cut(s)	25, 829, 970
SmoI	CTYRAG	3 cut(s)	25, 829, 970
SpeI	ACTAGT	1 cut(s)	182
Sse9I	AATT	7 cut(s)	838, 1024, 1523, 1698, 2128, 2140, 2203
SspMI	CTAG	7 cut(s)	12, 183, 417, 609, 2061, 2082, 2097
SstI	GAGCTC	1 cut(s)	2528
StyD4I	CCNGG	6 cut(s)	272, 350, 509, 778, 991, 1990
StyI	CCWWGG	1 cut(s)	535
TaaI	ACNGT	8 cut(s)	577, 742, 1142, 1571, 1832, 2183, 2472, 2499
TaiI	ACGT	2 cut(s)	345, 1009
TaqI	TCGA	3 cut(s)	555, 1349, 1750
TaqII	GACCGA	1 cut(s)	1364
TasI	AATT	7 cut(s)	838, 1024, 1523, 1698, 2128, 2140, 2203
TatI	WGTACW	3 cut(s)	1142, 1229, 2499
TauI	GCSGC	3 cut(s)	114, 314, 991
Tru1I	TTAA	8 cut(s)	297, 945, 1653, 1932, 2106, 2216, 2349, 2367
Tru9I	TTAA	8 cut(s)	297, 945, 1653, 1932, 2106, 2216, 2349, 2367
TseFI	GTSAC	3 cut(s)	1332, 1487, 1504
TseI	GCWGC	3 cut(s)	380, 1088, 1605
Tsp45I	GTSAC	3 cut(s)	1332, 1487, 1504
TspGWI	ACGGA	4 cut(s)	665, 1492, 1637, 2183
Van91I	CCANNNNNTGG	1 cut(s)	2123
VpaK11BI	GGWCC	2 cut(s)	1732, 2111
XapI	RAATTY	3 cut(s)	2128, 2140, 2203
XbaI	TCTAGA	1 cut(s)	2060
XmiI	GTMKAC	1 cut(s)	1968
XmnI	GAANNNNTTC	2 cut(s)	1179, 2406
XspI	CTAG	7 cut(s)	12, 183, 417, 609, 2061, 2082, 2097
ZraI	GACGTC	1 cut(s)	343
ZrmI	AGTACT	1 cut(s)	1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.