Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0010239

Physical Location & Seq

Genomic Coordinates Forward (+)

1048815 .. 1052523

Gene Structure 3709 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1010700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGCTACGCCACTTCGAAATGGGTGGCGCCGGCAACCGATTCTTCACCCTCCTCTCCACCACCACCACCCACCCTGTCCACCGCTTCCCTTCTCTCGTCCGCCTCCGCCACTCCAAACCCCCACTCTTCCCTTCCTCCTCCCTCTCTTTCCTTTCCCACCGTCACTCCCTCTCTTCCCGCCCCTCCTCCTGCTCCGCCTCCCCCTTCCCTCCCAATTCCTCTCACCATTTCCATTCCCATTCCCACTCCCCCGTTTCCGCCGCCTACCCTTCTTATGCTGATTCCGCCCCTTTAAGACACTCGCACCCTTGGCCCGAGTGGTCCCACTTCCTCAACTCCCTCTCCGCTGCCGGCTACAACGGAACCAACGGCCAGGATGAGTTCACCGCTGTGGTCCGGGATTTGCCCGAGGATTTCATGCTTGCTGCGAATGTTTGCCTGGCGTTCGCTAGGCAAAGAGCTGGCCTTTTGAGGTTTCTTTCGAGGCGGGATCTAGAGGTTGTGGTGGAGAATGGGACGCCATTTCTGTTTCAGAATGGCGATGATTCGGTGAGGCGAATGAGATTGTTTCTCGGCCAAGGCGATACCAATGCCTTGGACATTGACAAAGCACAAACGGTTGATTTGATGAGATTTATTTTGAGTTATGCTAGTACCCCTGTTTTTTCGTCGGAGAGAAACAATCTGTACAATAGAGAAATTGTTGAATCATCTGTTCGTACTCTGTTGGGTGAAATGGCCAAGCTCTGCTTTAGCGCTCCAGATTTGAACTTTATTGGGGCAATGCAGAGTCGATCCCCTGGTAACTATGGAGAATCTGTTAGGCCTTTTGGAAAAACTATTGAAATGAAAAGAGGTGATTGGATTTGTCAGAGGTGTAATTTCATGAACTTTGCAAGAAACATGAAATGCCTAGAGTGTGAGGAGGCTCGGCCAAAGAGACAGCTGACTGGCTATGAGTGGGAGTGCCCTCAATGTGATTTTTTCAACTATGGTGGAAACATGGTATGTTTGAGGTGTGATTGTAAGCGCCCTGGAGAGGTCTCACTTGGTTCCACCAAAAATAGGTTAGATATGGGATATGAAAATGTGGGTGATAGAAATAGGGCTGAAATCGATAGCAGGCTGGCCGCTAATGAAGAGAAGGCACAGCGGTGGTTTAGTAAGATTTCTCAGCTAGACAGTACTTCAGACATGAGCAACGCTGTATCTGATGAAGATTTTCCTGAAATAATGCCACTGAGAAAAGGAGTAAACAGATTTGTTGTAAGCACTAGGAAGACGCCATTAGAGAGGAGGCTGGAAAATGCTCAATACCAAAGAAACGTGGATAATGAGGGCAATTATCAAGGCAAGGATCTTCAAGCTGGGAGTGCGAATAGGTCACTTGGTCGTACAGCCAACCGGACTTTAGATGAAATTCTTGGCCGTGCATCTGTTCCTGAGTCAAATAATACAAGTACCAATCTCAGACAAAATGTTGGAACTGACACTCCCTCTTCCATGCAGACCTCAGTTTCCTCAGAGTATGGACAACCTAATGGGGGCAATTCCACTTATTCCCAATTTGTGCCGTTACCTGAGGATAAGTTTGCCAGGAAACCTGAGAATTCAAGTGTGGAGGAGAGTATGCAGCTGTCTGAGAAGCCTCCGGAACAGGCTGGGAGCAAGGATGACGAAAGAGATCAAGTGGAAAAATCTGAGAGATGGTTTAAGAGGGTTGCAGAGTTGCACGATGTTACTGATCTTGCGAGCGCAATTTCAGATGAGGACTTTCCTGAAATTATGCCGATGCGTAAGGGAGAGAATCGATTTGTTGTCAGTAAGAAGAAAGATCGGTCTTTGACTACTCCGGCATACAAGAGACGTTCAGCTACTGAACAAGCTGGCAATGCGAATTATGTTCCCTTCGTACCCTTTCCACCCGACTACTTTGCTAAAAAAAACCACCAGCAGACAGAAGAGACAGGTTTGACTAACAAGACTGTTGATGAAACAACTACAACTATGATCCCAGATATCAACCCTTCAGACAATATGGTTGATGCTAGACCTGGGAAGCTGAATGCTGATCATGTTCTACAGATGAAAAATCAGCAAAGCAGTGTGCCAAGCCGGAACTCAGAAAATTCGGGACAAAATCAGCTCAAGGATACTGCCCGCAATTTTGCTAATTCTAGCCCAAACGGCACGGATAGATTGAACAGTGGATCTTCAGGGAAAGAGAATTCTAACCAGACAGCAAGTTCGACATGGAATCCACCGCAGCAGTCCAATGATCAGAACATTAGGCAGGGCTGGACTGGGAAAAGTTTGGAGGGGTCAGCAGTGAAGGAGCCAGATCCTTTAGATATGTCAGAGGAGGCAAAGGCGGAGAGATGGTTCAAGCGCGTTGCGCAGATAAAAGACATCTCAGAGCTGAGTCAGATTCCGGATGAAGATTTCCCGTCAATAATGCCAATGCGGAAAGGGGTGAATAGGTTTGTTGTCAGCAAGCGGAAAACGCCGTTGGAGAGGAGGCTGACATCTCCACAATACAGAAAAAATCTTCCTATTGTAAGCTCTGATCCAGCAAAGGAAAGAGATGATAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ribosomal_L24e zf-RanBP

Protein Analysis

865

Amino Acids

97.18

Weight (kDa)

7.59

Isoelectric Point (pI)

51.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	285 - 311	2.3e-06	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17790
fragaria_vesca	FvH4_2g05470
malus_domestica	MD12G1012900.v1.1 MD14G1010700.v1.1
prunus_persica	Prupe.7G017200_v2.0.a1
pyrus_communis	pycom05g28400 pycom12g01030 pycom14g00910
rosa_chinensis	RchiOBHm_Chr3g0495901
rosa_laevigata	RLG00000022581
rosa_multiflora	Rmu_co8376015.1_g000001 Rmu_co8410629.1_g000001
rosa_roxburghii	Rroxscaffold_6G00389920
rosa_rugosa	Rorug03G0276900 Rorug03G0277000 Rorug03G0277100
rosa_samantha	Rh3AG324800 Rh3BG360800 Rh3CG357100 Rh3DG359900
rosa_wichuraiana	Rw3G028370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2397
AccB1I	GGYRCC	1 cut(s)	26
AccII	CGCG	1 cut(s)	2391
AccIII	TCCGGA	2 cut(s)	1651, 2431
AclWI	GGATC	7 cut(s)	498, 789, 1365, 2005, 2218, 2336, 2561
AcoI	YGGCCR	6 cut(s)	370, 574, 738, 932, 1128, 1426
AcsI	RAATTY	4 cut(s)	1419, 1609, 2128, 2227
AcuI	CTGAAG	3 cut(s)	1173, 2013, 2199
AcyI	GRCGYC	3 cut(s)	27, 518, 1283
AfaI	GTAC	7 cut(s)	655, 689, 721, 1186, 1396, 1462, 1914
AfeI	AGCGCT	1 cut(s)	757
AfiI	CCNNNNNNNGG	3 cut(s)	1039, 1065, 1544
AgsI	TTSAA	8 cut(s)	707, 769, 845, 988, 1364, 1614, 2203, 2386
AjnI	CCWGG	6 cut(s)	372, 438, 799, 1033, 1595, 2053
AjuI	GAANNNNNNNTTGG	2 cut(s)	2492, 2524
AleI	CACNNNNGTG	2 cut(s)	389, 1153
AloI	GAACNNNNNNTCC	4 cut(s)	1477, 1509, 2366, 2398
Alw26I	GTCTC	4 cut(s)	934, 1048, 1858, 1958
AlwI	GGATC	7 cut(s)	498, 789, 1365, 2005, 2218, 2336, 2561
AlwNI	CAGNNNCTG	1 cut(s)	1877
Ama87I	CYCGRG	2 cut(s)	314, 407
Aor13HI	TCCGGA	2 cut(s)	1651, 2431
Aor51HI	AGCGCT	1 cut(s)	757
AoxI	GGCC	9 cut(s)	311, 370, 463, 574, 738, 824, 932, 1128, 1426
ApeKI	GCWGC	4 cut(s)	347, 425, 1633, 2266
ApoI	RAATTY	4 cut(s)	1419, 1609, 2128, 2227
ArsI	GACNNNNNNTTYG	2 cut(s)	2230, 2262
Asp700I	GAANNNNTTC	1 cut(s)	1221
AspLEI	GCGC	6 cut(s)	29, 758, 1032, 1757, 2391, 2398
AspS9I	GGNCC	3 cut(s)	312, 321, 394
AsuC2I	CCSGG	1 cut(s)	398
AsuHPI	GGTGA	8 cut(s)	37, 215, 376, 562, 743, 869, 1106, 2485
AsuII	TTCGAA	1 cut(s)	15
AvaI	CYCGRG	2 cut(s)	314, 407
AvaII	GGWCC	2 cut(s)	321, 394
AxyI	CCTNAGG	1 cut(s)	1581
BaeGI	GKGCMC	1 cut(s)	971
BalI	TGGCCA	1 cut(s)	740
BanI	GGYRCC	1 cut(s)	26
BbsI	GAAGAC	1 cut(s)	1286
BbvI	GCAGC	4 cut(s)	334, 412, 1645, 2278
BccI	CCATC	2 cut(s)	1701, 2373
BceAI	ACGGC	5 cut(s)	385, 1413, 1558, 2203, 2491
BcgI	CGANNNNNNTGC	4 cut(s)	572, 606, 1916, 1950
BciT130I	CCWGG	6 cut(s)	374, 440, 801, 1035, 1597, 2055
BciVI	GTATCC	1 cut(s)	2146
BclI	TGATCA	2 cut(s)	2071, 2278
BcnI	CCSGG	1 cut(s)	398
BcoDI	GTCTC	4 cut(s)	934, 1048, 1858, 1958
BfaI	CTAG	8 cut(s)	450, 494, 651, 914, 1178, 1275, 2049, 2178
BfmI	CTRYAG	1 cut(s)	2081
BfoI	RGCGCY	3 cut(s)	30, 759, 1033
BfuI	GTATCC	1 cut(s)	2146
BglI	GCCNNNNNGGC	1 cut(s)	2187
BisI	GCNGC	6 cut(s)	261, 348, 426, 1131, 1634, 2267
BlsI	GCNGC	6 cut(s)	262, 349, 427, 1132, 1635, 2268
BmcAI	AGTACT	1 cut(s)	1186
Bme1390I	CCNGG	7 cut(s)	374, 398, 440, 801, 1035, 1597, 2055
Bme18I	GGWCC	2 cut(s)	321, 394
BmeT110I	CYCGRG	2 cut(s)	314, 407
BmgT120I	GGNCC	3 cut(s)	312, 321, 394
BmiI	GGNNCC	5 cut(s)	28, 323, 364, 1054, 2337
BmrFI	CCNGG	7 cut(s)	374, 398, 440, 801, 1035, 1597, 2055
BmrI	ACTGGG	1 cut(s)	2313
BmsI	GCATC	3 cut(s)	1442, 1782, 2035
BmuI	ACTGGG	1 cut(s)	2313
BpiI	GAAGAC	1 cut(s)	1286
BpmI	CTGGAG	2 cut(s)	744, 1056
Bpu14I	TTCGAA	1 cut(s)	15
BpuEI	CTTGAG	1 cut(s)	2132
BpuMI	CCSGG	1 cut(s)	398
Bsa29I	ATCGAT	2 cut(s)	1116, 1810
BsaHI	GRCGYC	3 cut(s)	27, 518, 1283
BsaI	GGTCTC	1 cut(s)	1048
BsaJI	CCNNGG	7 cut(s)	308, 408, 577, 594, 799, 1033, 2054
BsaWI	WCCGGW	3 cut(s)	1404, 1651, 2431
Bsc4I	CCNNNNNNNGG	3 cut(s)	1039, 1065, 1544
Bse118I	RCCGGY	2 cut(s)	29, 350
Bse1I	ACTGG	2 cut(s)	955, 2308
Bse21I	CCTNAGG	1 cut(s)	1581
Bse3DI	GCAATG	2 cut(s)	789, 1897
BseAI	TCCGGA	2 cut(s)	1651, 2431
BseBI	CCWGG	6 cut(s)	374, 440, 801, 1035, 1597, 2055
BseCI	ATCGAT	2 cut(s)	1116, 1810
BseDI	CCNNGG	7 cut(s)	308, 408, 577, 594, 799, 1033, 2054
BseGI	GGATG	3 cut(s)	382, 1678, 2440
BseLI	CCNNNNNNNGG	3 cut(s)	1039, 1065, 1544
BseMI	GCAATG	2 cut(s)	789, 1897
BseNI	ACTGG	2 cut(s)	955, 2308
BseRI	GAGGAG	8 cut(s)	41, 127, 175, 938, 1309, 1637, 2375, 2530
BseSI	GKGCMC	1 cut(s)	971
BseXI	GCAGC	4 cut(s)	334, 412, 1645, 2278
BseYI	CCCAGC	2 cut(s)	1367, 1661
Bsh1236I	CGCG	1 cut(s)	2391
BshFI	GGCC	9 cut(s)	313, 372, 465, 576, 740, 826, 934, 1130, 1428
BshNI	GGYRCC	1 cut(s)	26
BshVI	ATCGAT	2 cut(s)	1116, 1810
BsiHKCI	CYCGRG	2 cut(s)	314, 407
BsiSI	CCGG	8 cut(s)	30, 351, 397, 1405, 1652, 1853, 2116, 2432
BslFI	GGGAC	3 cut(s)	307, 529, 2148
BslI	CCNNNNNNNGG	3 cut(s)	1039, 1065, 1544
BsmAI	GTCTC	4 cut(s)	934, 1048, 1858, 1958
BsmBI	CGTCTC	1 cut(s)	1858
BsmFI	GGGAC	3 cut(s)	307, 529, 2148
BsmI	GAATGC	1 cut(s)	2071
BsnI	GGCC	9 cut(s)	313, 372, 465, 576, 740, 826, 934, 1130, 1428
Bso31I	GGTCTC	1 cut(s)	1048
BsoBI	CYCGRG	2 cut(s)	314, 407
Bsp119I	TTCGAA	1 cut(s)	15
Bsp1286I	GDGCHC	1 cut(s)	971
Bsp13I	TCCGGA	2 cut(s)	1651, 2431
Bsp1407I	TGTACA	1 cut(s)	687
BspANI	GGCC	9 cut(s)	313, 372, 465, 576, 740, 826, 934, 1130, 1428
BspDI	ATCGAT	2 cut(s)	1116, 1810
BspEI	TCCGGA	2 cut(s)	1651, 2431
BspFNI	CGCG	1 cut(s)	2391
BspHI	TCATGA	1 cut(s)	885
BspLI	GGNNCC	5 cut(s)	28, 323, 364, 1054, 2337
BspPI	GGATC	7 cut(s)	498, 789, 1365, 2005, 2218, 2336, 2561
BspT104I	TTCGAA	1 cut(s)	15
BspT107I	GGYRCC	1 cut(s)	26
BspTNI	GGTCTC	1 cut(s)	1048
BsrDI	GCAATG	2 cut(s)	789, 1897
BsrFI	RCCGGY	2 cut(s)	29, 350
BsrGI	TGTACA	1 cut(s)	687
BsrI	ACTGG	2 cut(s)	955, 2308
BssAI	RCCGGY	2 cut(s)	29, 350
BssECI	CCNNGG	7 cut(s)	308, 408, 577, 594, 799, 1033, 2054
BssNI	GRCGYC	3 cut(s)	27, 518, 1283
BssT1I	CCWWGG	3 cut(s)	308, 577, 594
Bst2UI	CCWGG	6 cut(s)	374, 440, 801, 1035, 1597, 2055
Bst4CI	ACNGT	5 cut(s)	161, 619, 1184, 1987, 2207
Bst6I	CTCTTC	5 cut(s)	131, 178, 1134, 1504, 1956
BstACI	GRCGYC	3 cut(s)	27, 518, 1283
BstAUI	TGTACA	1 cut(s)	687
BstBI	TTCGAA	1 cut(s)	15
BstF5I	GGATG	3 cut(s)	382, 1678, 2440
BstFNI	CGCG	1 cut(s)	2391
BstH2I	RGCGCY	3 cut(s)	30, 759, 1033
BstHHI	GCGC	6 cut(s)	29, 758, 1032, 1757, 2391, 2398
BstMAI	GTCTC	4 cut(s)	934, 1048, 1858, 1958
BstMWI	GCNNNNNNNGC	7 cut(s)	284, 310, 1373, 1892, 2187, 2395, 2503
BstNI	CCWGG	6 cut(s)	374, 440, 801, 1035, 1597, 2055
BstSCI	CCNGG	7 cut(s)	372, 396, 438, 799, 1033, 1595, 2053
BstSFI	CTRYAG	1 cut(s)	2081
BstSLI	GKGCMC	1 cut(s)	971
BstUI	CGCG	1 cut(s)	2391
BstV1I	GCAGC	4 cut(s)	334, 412, 1645, 2278
BstV2I	GAAGAC	1 cut(s)	1286
BstX2I	RGATCY	4 cut(s)	490, 1357, 2210, 2341
BstXI	CCANNNNNNTGG	1 cut(s)	595
BstYI	RGATCY	4 cut(s)	490, 1357, 2210, 2341
Bsu15I	ATCGAT	2 cut(s)	1116, 1810
Bsu36I	CCTNAGG	1 cut(s)	1581
BsuI	GTATCC	1 cut(s)	2146
BsuRI	GGCC	9 cut(s)	313, 372, 465, 576, 740, 826, 934, 1130, 1428
BsuTUI	ATCGAT	2 cut(s)	1116, 1810
BtgZI	GCGATG	1 cut(s)	555
BtsCI	GGATG	3 cut(s)	382, 1678, 2440
BtsI	GCAGTG	2 cut(s)	2110, 2334
BtsIMutI	CAGTG	4 cut(s)	1238, 2110, 2212, 2334
CaiI	CAGNNNCTG	1 cut(s)	1877
CciI	TCATGA	1 cut(s)	885
CfoI	GCGC	6 cut(s)	29, 758, 1032, 1757, 2391, 2398
Cfr10I	RCCGGY	2 cut(s)	29, 350
Cfr13I	GGNCC	3 cut(s)	312, 321, 394
ClaI	ATCGAT	2 cut(s)	1116, 1810
CseI	GACGC	2 cut(s)	526, 1291
Csp6I	GTAC	7 cut(s)	654, 688, 720, 1185, 1395, 1461, 1913
CspCI	CAANNNNNGTGG	2 cut(s)	976, 1011
CviAII	CATG	8 cut(s)	418, 886, 904, 1003, 1195, 1504, 2075, 2253
CviQI	GTAC	7 cut(s)	654, 688, 720, 1185, 1395, 1461, 1913
DinI	GGCGCC	1 cut(s)	28
EaeI	YGGCCR	6 cut(s)	370, 574, 738, 932, 1128, 1426
Eam1104I	CTCTTC	5 cut(s)	131, 178, 1134, 1504, 1956
EarI	CTCTTC	5 cut(s)	131, 178, 1134, 1504, 1956
EciI	GGCGGA	6 cut(s)	89, 95, 184, 247, 274, 2387
Eco130I	CCWWGG	3 cut(s)	308, 577, 594
Eco147I	AGGCCT	1 cut(s)	826
Eco31I	GGTCTC	1 cut(s)	1048
Eco32I	GATATC	1 cut(s)	2020
Eco47I	GGWCC	2 cut(s)	321, 394
Eco47III	AGCGCT	1 cut(s)	757
Eco57I	CTGAAG	3 cut(s)	1173, 2013, 2199
Eco81I	CCTNAGG	1 cut(s)	1581
Eco88I	CYCGRG	2 cut(s)	314, 407
EcoRI	GAATTC	2 cut(s)	1609, 2227
EcoRII	CCWGG	6 cut(s)	372, 438, 799, 1033, 1595, 2053
EcoRV	GATATC	1 cut(s)	2020
EcoT14I	CCWWGG	3 cut(s)	308, 577, 594
EgeI	GGCGCC	1 cut(s)	28
EheI	GGCGCC	1 cut(s)	28
ErhI	CCWWGG	3 cut(s)	308, 577, 594
Esp3I	CGTCTC	1 cut(s)	1858
FaeI	CATG	8 cut(s)	421, 889, 907, 1006, 1198, 1507, 2078, 2256
FalI	AAGNNNNNCTT	2 cut(s)	734, 766
FaqI	GGGAC	3 cut(s)	307, 529, 2148
FatI	CATG	8 cut(s)	417, 885, 903, 1002, 1194, 1503, 2074, 2252
FauI	CCCGC	3 cut(s)	185, 480, 2168
FbaI	TGATCA	2 cut(s)	2071, 2278
Fnu4HI	GCNGC	6 cut(s)	261, 348, 426, 1131, 1634, 2267
FokI	GGATG	3 cut(s)	389, 1685, 2447
Fsp4HI	GCNGC	6 cut(s)	261, 348, 426, 1131, 1634, 2267
FspBI	CTAG	8 cut(s)	450, 494, 651, 914, 1178, 1275, 2049, 2178
FspI	TGCGCA	1 cut(s)	2397
GlaI	GCGC	6 cut(s)	28, 757, 1031, 1756, 2390, 2397
GluI	GCNGC	6 cut(s)	261, 348, 426, 1131, 1634, 2267
GsaI	CCCAGC	2 cut(s)	1371, 1665
GsuI	CTGGAG	2 cut(s)	744, 1056
HaeII	RGCGCY	3 cut(s)	30, 759, 1033
HaeIII	GGCC	9 cut(s)	313, 372, 465, 576, 740, 826, 934, 1130, 1428
HapII	CCGG	8 cut(s)	30, 351, 397, 1405, 1652, 1853, 2116, 2432
HgaI	GACGC	2 cut(s)	526, 1291
HhaI	GCGC	6 cut(s)	29, 758, 1032, 1757, 2391, 2398
Hin1I	GRCGYC	3 cut(s)	27, 518, 1283
Hin1II	CATG	8 cut(s)	421, 889, 907, 1006, 1198, 1507, 2078, 2256
Hin6I	GCGC	6 cut(s)	27, 756, 1030, 1755, 2389, 2396
HinP1I	GCGC	6 cut(s)	27, 756, 1030, 1755, 2389, 2396
HpaII	CCGG	8 cut(s)	30, 351, 397, 1405, 1652, 1853, 2116, 2432
HphI	GGTGA	8 cut(s)	37, 215, 376, 562, 743, 869, 1106, 2485
Hpy166II	GTNNAC	3 cut(s)	79, 384, 1255
Hpy188III	TCNNGA	9 cut(s)	494, 761, 886, 1226, 1442, 1652, 1778, 2133, 2432
Hpy8I	GTNNAC	3 cut(s)	79, 384, 1255
Hpy99I	CGWCG	1 cut(s)	673
HpyAV	CCTTC	8 cut(s)	99, 141, 214, 279, 1138, 1918, 2037, 2326
HpyCH4III	ACNGT	5 cut(s)	161, 619, 1184, 1987, 2207
HpyCH4IV	ACGT	2 cut(s)	1326, 1867
HpyCH4V	TGCA	7 cut(s)	787, 896, 1433, 1507, 1633, 1724, 1732
HpyF10VI	GCNNNNNNNGC	7 cut(s)	284, 310, 1373, 1892, 2187, 2395, 2503
HpySE526I	ACGT	2 cut(s)	1326, 1867
Hsp92I	GRCGYC	3 cut(s)	27, 518, 1283
Hsp92II	CATG	8 cut(s)	421, 889, 907, 1006, 1198, 1507, 2078, 2256
HspAI	GCGC	6 cut(s)	27, 756, 1030, 1755, 2389, 2396
KasI	GGCGCC	1 cut(s)	26
Kpn2I	TCCGGA	2 cut(s)	1651, 2431
KroI	GCCGGC	2 cut(s)	29, 350
KroNI	GCCGGC	2 cut(s)	31, 352
Ksp22I	TGATCA	2 cut(s)	2071, 2278
LmnI	GCTCC	4 cut(s)	197, 763, 1665, 2335
Lsp1109I	GCAGC	4 cut(s)	334, 412, 1645, 2278
LweI	GCATC	3 cut(s)	1442, 1782, 2035
MaeI	CTAG	8 cut(s)	450, 494, 651, 914, 1178, 1275, 2049, 2178
MaeII	ACGT	2 cut(s)	1326, 1867
MaeIII	GTNAC	5 cut(s)	161, 803, 1383, 1575, 1738
MflI	RGATCY	4 cut(s)	490, 1357, 2210, 2341
MhlI	GDGCHC	1 cut(s)	971
MlsI	TGGCCA	1 cut(s)	740
MluNI	TGGCCA	1 cut(s)	740
Mly113I	GGCGCC	1 cut(s)	27
MlyI	GAGTC	3 cut(s)	799, 1454, 2431
MmeI	TCCRAC	3 cut(s)	651, 1462, 2490
Mox20I	TGGCCA	1 cut(s)	740
MroI	TCCGGA	2 cut(s)	1651, 2431
MroNI	GCCGGC	2 cut(s)	29, 350
MroXI	GAANNNNTTC	1 cut(s)	1221
MscI	TGGCCA	1 cut(s)	740
MseI	TTAA	2 cut(s)	293, 1713
MslI	CAYNNNNRTG	2 cut(s)	389, 1153
Msp20I	TGGCCA	1 cut(s)	740
MspA1I	CMGCKG	5 cut(s)	347, 389, 946, 1153, 1636
MspI	CCGG	8 cut(s)	30, 351, 397, 1405, 1652, 1853, 2116, 2432
MspR9I	CCNGG	7 cut(s)	374, 398, 440, 801, 1035, 1597, 2055
Mva1269I	GAATGC	1 cut(s)	2071
MvaI	CCWGG	6 cut(s)	374, 440, 801, 1035, 1597, 2055
MvnI	CGCG	1 cut(s)	2391
MwoI	GCNNNNNNNGC	7 cut(s)	284, 310, 1373, 1892, 2187, 2395, 2503
NaeI	GCCGGC	2 cut(s)	31, 352
NarI	GGCGCC	1 cut(s)	27
NciI	CCSGG	1 cut(s)	398
NgoMIV	GCCGGC	2 cut(s)	29, 350
NlaIII	CATG	8 cut(s)	421, 889, 907, 1006, 1198, 1507, 2078, 2256
NlaIV	GGNNCC	5 cut(s)	28, 323, 364, 1054, 2337
NmeAIII	GCCGAG	2 cut(s)	552, 910
NmuCI	GTSAC	2 cut(s)	161, 1383
NsbI	TGCGCA	1 cut(s)	2397
NspV	TTCGAA	1 cut(s)	15
OliI	CACNNNNGTG	2 cut(s)	389, 1153
PagI	TCATGA	1 cut(s)	885
PceI	AGGCCT	1 cut(s)	826
PcsI	WCGNNNNNNNCGW	1 cut(s)	579
PctI	GAATGC	1 cut(s)	2071
PdiI	GCCGGC	2 cut(s)	31, 352
PdmI	GAANNNNTTC	1 cut(s)	1221
PfeI	GAWTC	8 cut(s)	39, 281, 545, 707, 815, 1807, 2257, 2428
PfoI	TCCNGGA	1 cut(s)	396
PkrI	GCNGC	6 cut(s)	262, 349, 427, 1132, 1635, 2268
PleI	GAGTC	3 cut(s)	798, 1453, 2430
PluTI	GGCGCC	1 cut(s)	30
PpsI	GAGTC	3 cut(s)	798, 1453, 2430
Psp6I	CCWGG	6 cut(s)	372, 438, 799, 1033, 1595, 2053
PspFI	CCCAGC	2 cut(s)	1367, 1661
PspGI	CCWGG	6 cut(s)	372, 438, 799, 1033, 1595, 2053
PspN4I	GGNNCC	5 cut(s)	28, 323, 364, 1054, 2337
PspPI	GGNCC	3 cut(s)	312, 321, 394
PstNI	CAGNNNCTG	1 cut(s)	1877
PsuI	RGATCY	4 cut(s)	490, 1357, 2210, 2341
PvuII	CAGCTG	2 cut(s)	946, 1636
RsaI	GTAC	7 cut(s)	655, 689, 721, 1186, 1396, 1462, 1914
RsaNI	GTAC	7 cut(s)	654, 688, 720, 1185, 1395, 1461, 1913
RseI	CAYNNNNRTG	2 cut(s)	389, 1153
SaqAI	TTAA	2 cut(s)	293, 1713
SatI	GCNGC	6 cut(s)	261, 348, 426, 1131, 1634, 2267
Sau96I	GGNCC	3 cut(s)	312, 321, 394
ScaI	AGTACT	1 cut(s)	1186
SchI	GAGTC	3 cut(s)	799, 1454, 2431
ScrFI	CCNGG	7 cut(s)	374, 398, 440, 801, 1035, 1597, 2055
SduI	GDGCHC	1 cut(s)	971
SfaNI	GCATC	3 cut(s)	1442, 1782, 2035
SfcI	CTRYAG	1 cut(s)	2081
SfoI	GGCGCC	1 cut(s)	28
SfuI	TTCGAA	1 cut(s)	15
SinI	GGWCC	2 cut(s)	321, 394
SmiMI	CAYNNNNRTG	2 cut(s)	389, 1153
SmlI	CTYRAG	1 cut(s)	2147
SmoI	CTYRAG	1 cut(s)	2147
SseBI	AGGCCT	1 cut(s)	826
SspDI	GGCGCC	1 cut(s)	26
SspMI	CTAG	8 cut(s)	450, 494, 651, 914, 1178, 1275, 2049, 2178
StuI	AGGCCT	1 cut(s)	826
StyD4I	CCNGG	7 cut(s)	372, 396, 438, 799, 1033, 1595, 2053
StyI	CCWWGG	3 cut(s)	308, 577, 594
TaaI	ACNGT	5 cut(s)	161, 619, 1184, 1987, 2207
TaiI	ACGT	2 cut(s)	1329, 1870
TaqI	TCGA	6 cut(s)	15, 482, 793, 1116, 1810, 2249
TaqII	GACCGA	1 cut(s)	1827
TatI	WGTACW	2 cut(s)	687, 1184
TauI	GCSGC	2 cut(s)	263, 1133
TfiI	GAWTC	8 cut(s)	39, 281, 545, 707, 815, 1807, 2257, 2428
Tru1I	TTAA	2 cut(s)	293, 1713
Tru9I	TTAA	2 cut(s)	293, 1713
TscAI	CASTG	4 cut(s)	1245, 2110, 2212, 2334
TseFI	GTSAC	2 cut(s)	161, 1383
TseI	GCWGC	4 cut(s)	347, 425, 1633, 2266
Tsp45I	GTSAC	2 cut(s)	161, 1383
TspGWI	ACGGA	2 cut(s)	375, 2207
TspRI	CASTG	4 cut(s)	1245, 2110, 2212, 2334
VpaK11BI	GGWCC	2 cut(s)	321, 394
XapI	RAATTY	4 cut(s)	1419, 1609, 2128, 2227
XbaI	TCTAGA	1 cut(s)	493
XmnI	GAANNNNTTC	1 cut(s)	1221
XspI	CTAG	8 cut(s)	450, 494, 651, 914, 1178, 1275, 2049, 2178
ZrmI	AGTACT	1 cut(s)	1186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.