Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0010239

Physical Location & Seq

Genomic Coordinates Forward (+)

4515721 .. 4519027

Gene Structure 3307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022581

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGGGTGGTGCTAGCAACAGGTTCTTGAGCCTACTCTCCACCACGACGTACCCTTTGCCTCTTCATCTCCACCACCGCTTCCCTTGTCTCCTCCTCCTCCGCCTGTCCCGCCGCTCGTCCAGTCCCCAACTCGTGTCTCGCCTTTATCATTCTACTCTCTCTTGTCGCTCCTCCTCTTTTACTCTTCTCAAATCCTCCCATCATTTCCATTTCCACTCCAACGCCTCTGCAGTTTCCCCTGCTTACCCTTCTGCCGACCCACCCCTGCACCCCTGGCCGGAGTGGTCGCACCTCCTTAATGCTCTCTCTGCCGCCGGTTATGATGAAGTCCCCGGCCACGACGCCTTCACCGGGGATTTGCCCGACCACTTTGTGCGCGCTGCCCGTGTTTGTTTGGCCTTCGCCACCGCACGACCTGGGCTTTTGAGGTTGCTTTCTCGGAGAGATTTAGAGGTTGTGGTGGAGAATGGGACGCCGTTTTTGTTCCAGAATGGTGATGATTCAGCCCGGAGGATGACCTCATTTCTCGCCCAAGGCTCTACCAATGCCTTCGATACTGATAAAGCACAAACGGTTGATTTGATGAGATTTATATTGAGTTATGCTAGCACTCCTGTTTTTTATTCAGAGCGAAACAACCTCTACAATAGAGAACTTGTTGAATCATCTGTCCGTAATCTGTTGAGAGAAATGGCGAAGCTTTGTTATAGCGCTCCAGAGTCTAACTCTTTTGGGACAGTGCAGAATCAAAGTTCTAATAATCATGGAGCAACTCCTGGGCCTTTTGGCAAAACTATTGAAATGAAAAGAGGCGACTGGATTTGCTCAAGGTGCAATTTCATGAACTTTGCAAAAAACATGAAATGCCTTGAATGCAATGAGGCAAAGCCACACAGACAGCTGACTGGCAGAGAGTGGGAGTGTCCTCAATGTGATTTTTTTAACTACGGGAGAAACATGGTATGCTTGAGGTGTGATTGCAAGCGGCCCGGGGAGGTCTCACGTGGTACCCCTAAAACTAATTTAGATATTGGATTTTACAATGGAGATGATACAAATAAAGCTGATATCAATAGCAGGCTGGCTGCCAATGAAGAAAAGGCACAGCGGTGGTTTAGTAAGATTTCTCAGTTAGACAGTACTTCAGACATGAGCAGTGCAATATCAGATGAAGATTTTCCTGAAATAATGCCATTGAGGAAAGGAGTAAATAGATTTGTTGTGAGTACAAGGAAGACACCATTAGAGAGGAGGCTGGCGAATGCCCAGTACCAAAGAAGCTTGGACAGTGATGAAATCAAAGATCTCCAAAAGGGGAGTGCAAATAAGTCACTTGGTGCTACATCGAGCCAGACTTTAGATACTATTCTCGGTCGTTCATCTGTTTCTGAACCAAATGCTACCAATACCAATGCTGGAGAACATGGTAAAACTGATAACCCCTCTTTTATCTCTAGCTCAGGTTCCACACAGTATCAACAGCCCAGACGGGGTAACTCCAATTATGCCCCATTTGTGCCATTACCTGCAGATGCGTTTGCTAAGAAACCTGAGACTTCATATATGGAGGAGAGTGGGAAGTTAGTGAGAGACCAAAATGAGTCTGTCACTTTGAAGGACAGTGAATTGGAAGGTGTTTCTGGGAACAATCAATCTCGTAAATCAGAAGACAGTCTGTTATCTGCAAAGTCTATGAAACAAGCTGGCAGCAGGAATGAAGAAAAGGAACAAGCTGAAAAATCTGAGAGATGGTTTAAGAGGGTTGCAGAGTTGCATGATGTTACAGATCTTGCAAGTGCAATTTCCGATGAGGACTTCCCTGAAATCATGCCGGTCCGCAAAGGAGAGAATCGATTTATGGTCAGCAAGAAGAAAGATCGTTCTTCGTCTTCTCCAGCATACAAGAGAGGTGCAGCTATGGAACAACCTAACAGTGCCAACTATGTTCCCTTCGTTCCCTTCCCACCTGACTACTTTGCTAAAGTTGACAATCCACAGACAAGCAGGACAGCTTTGGATAACAAGACTGGTGTTAAGTCAACTCCAACTATGATGCCAGAGAACCCTGTAGACAAATCGTTTGACACAAGACCTGGGACGCTGAATGCTGGTCATAGTCAACAAATGGAAAGTCAGCAAAGCCGTGTTGCCAACTTGAAATCTAGATCTTCTGAAGATAATCCTAAAAAGAAATGGACTAGCTCTGTTAATGGACCCCCAGCCAGTGGAAATTCTGCTCTGAATTTTGCTAATACTACCACTGATAGTACAGACAGATTGAACAGTGGATCTTCAGGGAAAGAGAATTTTGATGAGTCAATGGATTCGCACCATCCGTCCAATGAACATAACATTAGACAGCACTGGACTGGGAAGAGTCTGGAGGGGTCAGCAGTGAAGGAACCAAATCCTTTAGATATGTCAGAGGAGGCAAAGGCAGAGAGATGGTTTAAGCGTGTTGCTCAGATTAAAGACATATCAGAGCTGAGTCAGATTCCTGATGAAGATTTCCCATCAATAATGCCAATGCGTAAAGGAGTGAATCGGTTTGTGGTCAGCAAGAGGAAAACACCGTTGGAGAGGAGGTTGACGTCTCCACAGTACAGAAAAAGCCTTCCTATTGTGAACTCTGATCCAGTGAAGGAAGATGATGGTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ribosomal_L24e zf-RanBP

Protein Analysis

887

Amino Acids

98.86

Weight (kDa)

8.57

Isoelectric Point (pI)

53.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	270 - 292	2.2e-06	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17790
fragaria_vesca	FvH4_2g05470
malus_domestica	MD12G1012900.v1.1 MD14G1010700.v1.1
prunus_persica	Prupe.7G017200_v2.0.a1
pyrus_communis	pycom05g28400 pycom12g01030 pycom14g00910
rosa_chinensis	RchiOBHm_Chr3g0495901
rosa_laevigata	RLG00000022581
rosa_multiflora	Rmu_co8376015.1_g000001 Rmu_co8410629.1_g000001
rosa_roxburghii	Rroxscaffold_6G00389920
rosa_rugosa	Rorug03G0276900 Rorug03G0277000 Rorug03G0277100
rosa_samantha	Rh3AG324800 Rh3BG360800 Rh3CG357100 Rh3DG359900
rosa_wichuraiana	Rw3G028370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2594
Acc36I	ACCTGC	1 cut(s)	1534
Acc65I	GGTACC	1 cut(s)	1007
AccB1I	GGYRCC	1 cut(s)	1007
AccB7I	CCANNNNNTGG	1 cut(s)	2225
AccBSI	CCGCTC	1 cut(s)	114
AccI	GTMKAC	1 cut(s)	2070
AccII	CGCG	1 cut(s)	378
AciI	CCGC	9 cut(s)	76, 100, 109, 112, 312, 408, 985, 1108, 1837
AclWI	GGATC	2 cut(s)	2296, 2627
AcoI	YGGCCR	2 cut(s)	275, 334
AcsI	RAATTY	3 cut(s)	2230, 2242, 2305
AcuI	CTGAAG	3 cut(s)	1128, 2193, 2277
AcvI	CACGTG	1 cut(s)	1004
AcyI	GRCGYC	3 cut(s)	342, 473, 2591
AdeI	CACNNNGTG	2 cut(s)	373, 1337
AfaI	GTAC	7 cut(s)	50, 1009, 1141, 1228, 1271, 2269, 2603
AfeI	AGCGCT	1 cut(s)	712
AfiI	CCNNNNNNNGG	4 cut(s)	277, 351, 1490, 2225
AgsI	TTSAA	6 cut(s)	662, 800, 872, 1615, 2158, 2281
AjnI	CCWGG	4 cut(s)	272, 415, 775, 2092
AjuI	GAANNNNNNNTTGG	2 cut(s)	2558, 2590
AleI	CACNNNNGTG	1 cut(s)	1108
Alw26I	GTCTC	6 cut(s)	92, 141, 1003, 1547, 1584, 2598
AlwI	GGATC	2 cut(s)	2296, 2627
Ama87I	CYCGRG	1 cut(s)	989
Aor51HI	AGCGCT	1 cut(s)	712
AoxI	GGCC	5 cut(s)	275, 334, 396, 779, 986
ApeKI	GCWGC	4 cut(s)	380, 1085, 1707, 1913
ApoI	RAATTY	3 cut(s)	2230, 2242, 2305
ArsI	GACNNNNNNTTYG	8 cut(s)	37, 69, 463, 495, 2063, 2095, 2116, 2148
Asp700I	GAANNNNTTC	1 cut(s)	1176
Asp718I	GGTACC	1 cut(s)	1007
AspLEI	GCGC	3 cut(s)	378, 380, 713
AspS9I	GGNCC	4 cut(s)	779, 987, 1834, 2213
AsuC2I	CCSGG	5 cut(s)	333, 352, 508, 990, 991
AsuHPI	GGTGA	2 cut(s)	340, 506
AsuNHI	GCTAGC	2 cut(s)	11, 605
AvaI	CYCGRG	1 cut(s)	989
AvaII	GGWCC	2 cut(s)	1834, 2213
BanI	GGYRCC	1 cut(s)	1007
BauI	CACGAG	1 cut(s)	131
BbrPI	CACGTG	1 cut(s)	1004
BbsI	GAAGAC	3 cut(s)	1241, 1674, 1881
BbvI	GCAGC	4 cut(s)	367, 1072, 1719, 1925
BccI	CCATC	6 cut(s)	207, 1743, 2340, 2439, 2521, 2645
BceAI	ACGGC	2 cut(s)	460, 2127
BciT130I	CCWGG	4 cut(s)	274, 417, 777, 2094
BcnI	CCSGG	5 cut(s)	333, 352, 508, 990, 991
BcoDI	GTCTC	6 cut(s)	92, 141, 1003, 1547, 1584, 2598
BfaI	CTAG	5 cut(s)	12, 606, 1455, 2163, 2199
BfmI	CTRYAG	3 cut(s)	228, 1527, 2067
BfoI	RGCGCY	1 cut(s)	714
BfuAI	ACCTGC	1 cut(s)	1534
BglII	AGATCT	3 cut(s)	1303, 1786, 2165
BisI	GCNGC	7 cut(s)	112, 312, 381, 986, 1086, 1708, 1914
BlsI	GCNGC	7 cut(s)	113, 313, 382, 987, 1087, 1709, 1915
BmcAI	AGTACT	1 cut(s)	1141
Bme1390I	CCNGG	9 cut(s)	274, 333, 352, 417, 508, 777, 990, 991, 2094
Bme18I	GGWCC	2 cut(s)	1834, 2213
BmeT110I	CYCGRG	1 cut(s)	989
BmgT120I	GGNCC	4 cut(s)	779, 987, 1834, 2213
BmiI	GGNNCC	4 cut(s)	1009, 1465, 2215, 2403
BmrFI	CCNGG	9 cut(s)	274, 333, 352, 417, 508, 777, 990, 991, 2094
BmrI	ACTGGG	2 cut(s)	1261, 2379
BmsI	GCATC	2 cut(s)	1522, 2043
BmtI	GCTAGC	2 cut(s)	15, 609
BmuI	ACTGGG	2 cut(s)	1261, 2379
BpiI	GAAGAC	3 cut(s)	1241, 1674, 1881
BplI	GAGNNNNNCTC	2 cut(s)	710, 742
BpmI	CTGGAG	4 cut(s)	699, 1437, 1878, 2402
Bpu10I	CCTNAGC	1 cut(s)	1459
BpuEI	CTTGAG	3 cut(s)	46, 811, 988
BpuMI	CCSGG	5 cut(s)	333, 352, 508, 990, 991
Bsa29I	ATCGAT	1 cut(s)	1852
BsaAI	YACGTR	1 cut(s)	1004
BsaHI	GRCGYC	3 cut(s)	342, 473, 2591
BsaI	GGTCTC	2 cut(s)	1003, 1584
BsaJI	CCNNGG	9 cut(s)	272, 331, 351, 416, 532, 776, 989, 990, 2093
BsaXI	ACNNNNNCTCC	2 cut(s)	2570, 2600
Bsc4I	CCNNNNNNNGG	4 cut(s)	277, 351, 1490, 2225
Bse118I	RCCGGY	2 cut(s)	314, 1831
Bse1I	ACTGG	9 cut(s)	120, 821, 910, 1267, 2032, 2223, 2369, 2374, 2636
Bse3DI	GCAATG	1 cut(s)	883
BseBI	CCWGG	4 cut(s)	274, 417, 777, 2094
BseCI	ATCGAT	1 cut(s)	1852
BseDI	CCNNGG	9 cut(s)	272, 331, 351, 416, 532, 776, 989, 990, 2093
BseGI	GGATG	2 cut(s)	519, 2332
BseLI	CCNNNNNNNGG	4 cut(s)	277, 351, 1490, 2225
BseMI	GCAATG	1 cut(s)	883
BseMII	CTCAG	6 cut(s)	1142, 1473, 1542, 1734, 2477, 2477
BseNI	ACTGG	9 cut(s)	120, 821, 910, 1267, 2032, 2223, 2369, 2374, 2636
BsePI	GCGCGC	1 cut(s)	376
BseRI	GAGGAG	9 cut(s)	80, 83, 86, 160, 163, 1264, 1583, 2441, 2596
BseXI	GCAGC	4 cut(s)	367, 1072, 1719, 1925
BseYI	CCCAGC	1 cut(s)	2218
BsgI	GTGCAG	3 cut(s)	251, 761, 1932
Bsh1236I	CGCG	1 cut(s)	378
Bsh1285I	CGRYCG	1 cut(s)	1375
BshFI	GGCC	5 cut(s)	277, 336, 398, 781, 988
BshNI	GGYRCC	1 cut(s)	1007
BshVI	ATCGAT	1 cut(s)	1852
BsiEI	CGRYCG	1 cut(s)	1375
BsiHKCI	CYCGRG	1 cut(s)	989
BsiSI	CCGG	7 cut(s)	278, 315, 333, 351, 508, 990, 1832
BslFI	GGGAC	6 cut(s)	91, 108, 314, 484, 748, 2110
BslI	CCNNNNNNNGG	4 cut(s)	277, 351, 1490, 2225
BsmAI	GTCTC	6 cut(s)	92, 141, 1003, 1547, 1584, 2598
BsmBI	CGTCTC	1 cut(s)	2598
BsmFI	GGGAC	6 cut(s)	91, 108, 314, 484, 748, 2110
BsmI	GAATGC	3 cut(s)	878, 1267, 2110
BsnI	GGCC	5 cut(s)	277, 336, 398, 781, 988
Bso31I	GGTCTC	2 cut(s)	1003, 1584
BsoBI	CYCGRG	1 cut(s)	989
Bsp143I	GATC	6 cut(s)	1303, 1786, 1876, 2165, 2288, 2632
BspACI	CCGC	9 cut(s)	76, 100, 109, 112, 312, 408, 985, 1108, 1837
BspANI	GGCC	5 cut(s)	277, 336, 398, 781, 988
BspCNI	CTCAG	6 cut(s)	1141, 1472, 1543, 1735, 2476, 2478
BspDI	ATCGAT	1 cut(s)	1852
BspFNI	CGCG	1 cut(s)	378
BspHI	TCATGA	1 cut(s)	840
BspLI	GGNNCC	4 cut(s)	1009, 1465, 2215, 2403
BspMAI	CTGCAG	2 cut(s)	232, 1531
BspMI	ACCTGC	1 cut(s)	1534
BspOI	GCTAGC	2 cut(s)	15, 609
BspPI	GGATC	2 cut(s)	2296, 2627
BspT107I	GGYRCC	1 cut(s)	1007
BspTNI	GGTCTC	2 cut(s)	1003, 1584
BsrBI	CCGCTC	1 cut(s)	114
BsrDI	GCAATG	1 cut(s)	883
BsrFI	RCCGGY	2 cut(s)	314, 1831
BsrI	ACTGG	9 cut(s)	120, 821, 910, 1267, 2032, 2223, 2369, 2374, 2636
BssAI	RCCGGY	2 cut(s)	314, 1831
BssECI	CCNNGG	9 cut(s)	272, 331, 351, 416, 532, 776, 989, 990, 2093
BssHII	GCGCGC	1 cut(s)	376
BssMI	GATC	6 cut(s)	1303, 1786, 1876, 2165, 2288, 2632
BssNI	GRCGYC	3 cut(s)	342, 473, 2591
BssSI	CACGAG	1 cut(s)	131
BssT1I	CCWWGG	1 cut(s)	532
Bst2BI	CACGAG	1 cut(s)	131
Bst2UI	CCWGG	4 cut(s)	274, 417, 777, 2094
Bst6I	CTCTTC	3 cut(s)	66, 189, 2369
BstACI	GRCGYC	3 cut(s)	342, 473, 2591
BstBAI	YACGTR	1 cut(s)	1004
BstC8I	GCNNGC	8 cut(s)	13, 378, 607, 983, 1079, 1083, 1257, 1705
BstDEI	CTNAG	7 cut(s)	1128, 1459, 1542, 1551, 1743, 2463, 2486
BstF5I	GGATG	2 cut(s)	519, 2332
BstFNI	CGCG	1 cut(s)	378
BstH2I	RGCGCY	1 cut(s)	714
BstHHI	GCGC	3 cut(s)	378, 380, 713
BstKTI	GATC	6 cut(s)	1306, 1789, 1879, 2168, 2291, 2635
BstMAI	GTCTC	6 cut(s)	92, 141, 1003, 1547, 1584, 2598
BstMBI	GATC	6 cut(s)	1303, 1786, 1876, 2165, 2288, 2632
BstMCI	CGRYCG	1 cut(s)	1375
BstMWI	GCNNNNNNNGC	5 cut(s)	108, 274, 308, 831, 873
BstNI	CCWGG	4 cut(s)	274, 417, 777, 2094
BstSCI	CCNGG	9 cut(s)	272, 331, 350, 415, 506, 775, 988, 989, 2092
BstSFI	CTRYAG	3 cut(s)	228, 1527, 2067
BstUI	CGCG	1 cut(s)	378
BstV1I	GCAGC	4 cut(s)	367, 1072, 1719, 1925
BstV2I	GAAGAC	3 cut(s)	1241, 1674, 1881
BstX2I	RGATCY	4 cut(s)	1303, 1786, 2165, 2288
BstYI	RGATCY	4 cut(s)	1303, 1786, 2165, 2288
Bsu15I	ATCGAT	1 cut(s)	1852
BsuRI	GGCC	5 cut(s)	277, 336, 398, 781, 988
BsuTUI	ATCGAT	1 cut(s)	1852
BtsCI	GGATG	2 cut(s)	519, 2332
BtsI	GCAGTG	2 cut(s)	1162, 2400
BveI	ACCTGC	1 cut(s)	1534
Cac8I	GCNNGC	8 cut(s)	13, 378, 607, 983, 1079, 1083, 1257, 1705
CciI	TCATGA	1 cut(s)	840
CfoI	GCGC	3 cut(s)	378, 380, 713
Cfr10I	RCCGGY	2 cut(s)	314, 1831
Cfr13I	GGNCC	4 cut(s)	779, 987, 1834, 2213
Cfr9I	CCCGGG	1 cut(s)	989
ClaI	ATCGAT	1 cut(s)	1852
CpoI	CGGWCCG	1 cut(s)	1834
CseI	GACGC	3 cut(s)	350, 481, 2107
Csp6I	GTAC	7 cut(s)	49, 1008, 1140, 1227, 1270, 2268, 2602
CspI	CGGWCCG	1 cut(s)	1834
CviAII	CATG	8 cut(s)	764, 841, 859, 958, 1150, 1424, 1775, 1828
CviQI	GTAC	7 cut(s)	49, 1008, 1140, 1227, 1270, 2268, 2602
DdeI	CTNAG	7 cut(s)	1128, 1459, 1542, 1551, 1743, 2463, 2486
DpnI	GATC	6 cut(s)	1305, 1788, 1878, 2167, 2290, 2634
DpnII	GATC	6 cut(s)	1303, 1786, 1876, 2165, 2288, 2632
DraIII	CACNNNGTG	2 cut(s)	373, 1337
EaeI	YGGCCR	2 cut(s)	275, 334
Eam1104I	CTCTTC	3 cut(s)	66, 189, 2369
EarI	CTCTTC	3 cut(s)	66, 189, 2369
EciI	GGCGGA	1 cut(s)	89
Eco130I	CCWWGG	1 cut(s)	532
Eco31I	GGTCTC	2 cut(s)	1003, 1584
Eco32I	GATATC	1 cut(s)	1069
Eco47I	GGWCC	2 cut(s)	1834, 2213
Eco47III	AGCGCT	1 cut(s)	712
Eco57I	CTGAAG	3 cut(s)	1128, 2193, 2277
Eco72I	CACGTG	1 cut(s)	1004
Eco88I	CYCGRG	1 cut(s)	989
EcoRII	CCWGG	4 cut(s)	272, 415, 775, 2092
EcoRV	GATATC	1 cut(s)	1069
EcoT14I	CCWWGG	1 cut(s)	532
ErhI	CCWWGG	1 cut(s)	532
Esp3I	CGTCTC	1 cut(s)	2598
FaeI	CATG	8 cut(s)	767, 844, 862, 961, 1153, 1427, 1778, 1831
FaqI	GGGAC	6 cut(s)	91, 108, 314, 484, 748, 2110
FatI	CATG	8 cut(s)	763, 840, 858, 957, 1149, 1423, 1774, 1827
FauI	CCCGC	1 cut(s)	116
FblI	GTMKAC	1 cut(s)	2070
Fnu4HI	GCNGC	7 cut(s)	112, 312, 381, 986, 1086, 1708, 1914
FokI	GGATG	2 cut(s)	526, 2319
Fsp4HI	GCNGC	7 cut(s)	112, 312, 381, 986, 1086, 1708, 1914
FspBI	CTAG	5 cut(s)	12, 606, 1455, 2163, 2199
GlaI	GCGC	3 cut(s)	377, 379, 712
GluI	GCNGC	7 cut(s)	112, 312, 381, 986, 1086, 1708, 1914
GsaI	CCCAGC	1 cut(s)	2222
GsuI	CTGGAG	4 cut(s)	699, 1437, 1878, 2402
HaeII	RGCGCY	1 cut(s)	714
HaeIII	GGCC	5 cut(s)	277, 336, 398, 781, 988
HapII	CCGG	7 cut(s)	278, 315, 333, 351, 508, 990, 1832
HgaI	GACGC	3 cut(s)	350, 481, 2107
HhaI	GCGC	3 cut(s)	378, 380, 713
Hin1I	GRCGYC	3 cut(s)	342, 473, 2591
Hin1II	CATG	8 cut(s)	767, 844, 862, 961, 1153, 1427, 1778, 1831
Hin6I	GCGC	3 cut(s)	376, 378, 711
HinP1I	GCGC	3 cut(s)	376, 378, 711
HincII	GTYRAC	4 cut(s)	1987, 2040, 2120, 2589
HindII	GTYRAC	4 cut(s)	1987, 2040, 2120, 2589
HindIII	AAGCTT	2 cut(s)	698, 1279
HpaII	CCGG	7 cut(s)	278, 315, 333, 351, 508, 990, 1832
HphI	GGTGA	2 cut(s)	340, 506
Hpy166II	GTNNAC	6 cut(s)	1987, 2040, 2071, 2120, 2589, 2626
Hpy188III	TCNNGA	8 cut(s)	25, 487, 716, 841, 1181, 2163, 2381, 2498
Hpy8I	GTNNAC	6 cut(s)	1987, 2040, 2071, 2120, 2589, 2626
Hpy99I	CGWCG	2 cut(s)	49, 344
HpyCH4IV	ACGT	3 cut(s)	47, 1003, 2591
HpyF10VI	GCNNNNNNNGC	5 cut(s)	108, 274, 308, 831, 873
HpyF3I	CTNAG	7 cut(s)	1128, 1459, 1542, 1551, 1743, 2463, 2486
HpySE526I	ACGT	3 cut(s)	47, 1003, 2591
Hsp92I	GRCGYC	3 cut(s)	342, 473, 2591
Hsp92II	CATG	8 cut(s)	767, 844, 862, 961, 1153, 1427, 1778, 1831
HspAI	GCGC	3 cut(s)	376, 378, 711
KpnI	GGTACC	1 cut(s)	1011
Kzo9I	GATC	6 cut(s)	1303, 1786, 1876, 2165, 2288, 2632
LmnI	GCTCC	3 cut(s)	173, 718, 767
Lsp1109I	GCAGC	4 cut(s)	367, 1072, 1719, 1925
LweI	GCATC	2 cut(s)	1522, 2043
MaeI	CTAG	5 cut(s)	12, 606, 1455, 2163, 2199
MaeII	ACGT	3 cut(s)	47, 1003, 2591
MaeIII	GTNAC	5 cut(s)	1329, 1493, 1606, 1780, 2654
MalI	GATC	6 cut(s)	1305, 1788, 1878, 2167, 2290, 2634
MbiI	CCGCTC	1 cut(s)	114
MboI	GATC	6 cut(s)	1303, 1786, 1876, 2165, 2288, 2632
MflI	RGATCY	4 cut(s)	1303, 1786, 2165, 2288
MluCI	AATT	8 cut(s)	835, 1021, 1501, 1625, 1800, 2230, 2242, 2305
MlyI	GAGTC	5 cut(s)	728, 1610, 2324, 2386, 2497
MmeI	TCCRAC	3 cut(s)	243, 2069, 2556
MroXI	GAANNNNTTC	1 cut(s)	1176
MseI	TTAA	7 cut(s)	297, 942, 1755, 2034, 2208, 2451, 2469
MslI	CAYNNNNRTG	1 cut(s)	1108
MspA1I	CMGCKG	2 cut(s)	901, 1108
MspI	CCGG	7 cut(s)	278, 315, 333, 351, 508, 990, 1832
MspR9I	CCNGG	9 cut(s)	274, 333, 352, 417, 508, 777, 990, 991, 2094
Mva1269I	GAATGC	3 cut(s)	878, 1267, 2110
MvaI	CCWGG	4 cut(s)	274, 417, 777, 2094
MvnI	CGCG	1 cut(s)	378
MwoI	GCNNNNNNNGC	5 cut(s)	108, 274, 308, 831, 873
NciI	CCSGG	5 cut(s)	333, 352, 508, 990, 991
NdeII	GATC	6 cut(s)	1303, 1786, 1876, 2165, 2288, 2632
NheI	GCTAGC	2 cut(s)	11, 605
NlaIII	CATG	8 cut(s)	767, 844, 862, 961, 1153, 1427, 1778, 1831
NlaIV	GGNNCC	4 cut(s)	1009, 1465, 2215, 2403
NmuCI	GTSAC	2 cut(s)	1329, 1606
OliI	CACNNNNGTG	1 cut(s)	1108
PagI	TCATGA	1 cut(s)	840
PauI	GCGCGC	1 cut(s)	376
PcsI	WCGNNNNNNNCGW	1 cut(s)	2333
PctI	GAATGC	3 cut(s)	878, 1267, 2110
PdmI	GAANNNNTTC	1 cut(s)	1176
PfeI	GAWTC	7 cut(s)	500, 662, 745, 1849, 2324, 2494, 2542
PflMI	CCANNNNNTGG	1 cut(s)	2225
PkrI	GCNGC	7 cut(s)	113, 313, 382, 987, 1087, 1709, 1915
PleI	GAGTC	5 cut(s)	727, 1609, 2323, 2385, 2496
PmaCI	CACGTG	1 cut(s)	1004
PmlI	CACGTG	1 cut(s)	1004
PpsI	GAGTC	5 cut(s)	727, 1609, 2323, 2385, 2496
Ppu21I	YACGTR	1 cut(s)	1004
Psp6I	CCWGG	4 cut(s)	272, 415, 775, 2092
PspCI	CACGTG	1 cut(s)	1004
PspFI	CCCAGC	1 cut(s)	2218
PspGI	CCWGG	4 cut(s)	272, 415, 775, 2092
PspN4I	GGNNCC	4 cut(s)	1009, 1465, 2215, 2403
PspPI	GGNCC	4 cut(s)	779, 987, 1834, 2213
PstI	CTGCAG	2 cut(s)	232, 1531
PsuI	RGATCY	4 cut(s)	1303, 1786, 2165, 2288
PteI	GCGCGC	1 cut(s)	376
PvuII	CAGCTG	1 cut(s)	901
RsaI	GTAC	7 cut(s)	50, 1009, 1141, 1228, 1271, 2269, 2603
RsaNI	GTAC	7 cut(s)	49, 1008, 1140, 1227, 1270, 2268, 2602
RseI	CAYNNNNRTG	1 cut(s)	1108
Rsr2I	CGGWCCG	1 cut(s)	1834
RsrII	CGGWCCG	1 cut(s)	1834
SaqAI	TTAA	7 cut(s)	297, 942, 1755, 2034, 2208, 2451, 2469
SatI	GCNGC	7 cut(s)	112, 312, 381, 986, 1086, 1708, 1914
Sau3AI	GATC	6 cut(s)	1303, 1786, 1876, 2165, 2288, 2632
Sau96I	GGNCC	4 cut(s)	779, 987, 1834, 2213
ScaI	AGTACT	1 cut(s)	1141
SchI	GAGTC	5 cut(s)	728, 1610, 2324, 2386, 2497
ScrFI	CCNGG	9 cut(s)	274, 333, 352, 417, 508, 777, 990, 991, 2094
SfaNI	GCATC	2 cut(s)	1522, 2043
SfcI	CTRYAG	3 cut(s)	228, 1527, 2067
SinI	GGWCC	2 cut(s)	1834, 2213
SmaI	CCCGGG	1 cut(s)	991
SmiMI	CAYNNNNRTG	1 cut(s)	1108
SmlI	CTYRAG	3 cut(s)	25, 826, 967
SmoI	CTYRAG	3 cut(s)	25, 826, 967
Sse9I	AATT	8 cut(s)	835, 1021, 1501, 1625, 1800, 2230, 2242, 2305
SsiI	CCGC	9 cut(s)	76, 100, 109, 112, 312, 408, 985, 1108, 1837
SspMI	CTAG	5 cut(s)	12, 606, 1455, 2163, 2199
StyD4I	CCNGG	9 cut(s)	272, 331, 350, 415, 506, 775, 988, 989, 2092
StyI	CCWWGG	1 cut(s)	532
TaiI	ACGT	3 cut(s)	50, 1006, 2594
TaqI	TCGA	3 cut(s)	552, 1346, 1852
TaqII	GACCGA	1 cut(s)	1361
TasI	AATT	8 cut(s)	835, 1021, 1501, 1625, 1800, 2230, 2242, 2305
TatI	WGTACW	4 cut(s)	1139, 1226, 2267, 2601
TauI	GCSGC	3 cut(s)	114, 314, 988
TfiI	GAWTC	7 cut(s)	500, 662, 745, 1849, 2324, 2494, 2542
Tru1I	TTAA	7 cut(s)	297, 942, 1755, 2034, 2208, 2451, 2469
Tru9I	TTAA	7 cut(s)	297, 942, 1755, 2034, 2208, 2451, 2469
TseFI	GTSAC	2 cut(s)	1329, 1606
TseI	GCWGC	4 cut(s)	380, 1085, 1707, 1913
Tsp45I	GTSAC	2 cut(s)	1329, 1606
TspGWI	ACGGA	2 cut(s)	662, 2325
TspMI	CCCGGG	1 cut(s)	989
Van91I	CCANNNNNTGG	1 cut(s)	2225
VpaK11BI	GGWCC	2 cut(s)	1834, 2213
XapI	RAATTY	3 cut(s)	2230, 2242, 2305
XbaI	TCTAGA	1 cut(s)	2162
XmaI	CCCGGG	1 cut(s)	989
XmiI	GTMKAC	1 cut(s)	2070
XmnI	GAANNNNTTC	1 cut(s)	1176
XspI	CTAG	5 cut(s)	12, 606, 1455, 2163, 2199
ZraI	GACGTC	1 cut(s)	2592
ZrmI	AGTACT	1 cut(s)	1141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.