MD12G1085900.v1.1

Mitochondrial import receptor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0009204
Physical Location & Seq
Forward (+)
10560871 .. 10561065
195 bp
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UTR
Exon/CDS
Intron
MD12G1085900.v1.1.491

Sequence Viewer

Length: 195 bp
ATGGCGTCGAGAATATCTCTGAAGAGCAAGGGCAAGACTTCGGCGAAGCCCTCCAAGGGCTCGGAGGAGCGCTCGGTGGCTCAATCCTTCAAGGGGTGGAGCACATGGGCCCTGAAAAAGGCCAAGGTCATCACCCGCTATGGCTTCATTCCCCTGGTCATCATCATCTGCATGAACTCGGAACCCAAGCCATAA

Protein Analysis

65

Amino Acids

7.06

Weight (kDa)

10.42

Isoelectric Point (pI)

31.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tom7 PF08038 31 - 64 3.8e-11 TOM7 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 136
AcuI CTGAAG 1 cut(s) 41
AcyI GRCGYC 1 cut(s) 5
AfeI AGCGCT 1 cut(s) 71
AfiI CCNNNNNNNGG 3 cut(s) 56, 93, 118
AgsI TTSAA 1 cut(s) 91
AjnI CCWGG 1 cut(s) 153
Alw21I GWGCWC 1 cut(s) 104
Aor51HI AGCGCT 1 cut(s) 71
AoxI GGCC 2 cut(s) 108, 120
ApaI GGGCCC 1 cut(s) 112
AspLEI GCGC 1 cut(s) 72
AspS9I GGNCC 2 cut(s) 108, 109
AsuHPI GGTGA 1 cut(s) 124
BaeGI GKGCMC 1 cut(s) 112
BanII GRGCYC 2 cut(s) 62, 112
Bbv12I GWGCWC 1 cut(s) 104
BciT130I CCWGG 1 cut(s) 155
BfoI RGCGCY 1 cut(s) 73
Bme1390I CCNGG 1 cut(s) 155
BmgT120I GGNCC 2 cut(s) 108, 109
BmiI GGNNCC 2 cut(s) 110, 183
BmrFI CCNGG 1 cut(s) 155
BplI GAGNNNNNCTC 3 cut(s) 33, 56, 88
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 3 cut(s) 54, 123, 153
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 93, 118
BseBI CCWGG 1 cut(s) 155
BseDI CCNNGG 3 cut(s) 54, 123, 153
BseLI CCNNNNNNNGG 3 cut(s) 56, 93, 118
BseRI GAGGAG 1 cut(s) 80
BseSI GKGCMC 1 cut(s) 112
BshFI GGCC 2 cut(s) 110, 122
BsiHKAI GWGCWC 1 cut(s) 104
BslI CCNNNNNNNGG 3 cut(s) 56, 93, 118
BsnI GGCC 2 cut(s) 110, 122
Bsp120I GGGCCC 1 cut(s) 108
Bsp1286I GDGCHC 3 cut(s) 62, 104, 112
BspACI CCGC 1 cut(s) 136
BspANI GGCC 2 cut(s) 110, 122
BspLI GGNNCC 2 cut(s) 110, 183
BspQI GCTCTTC 1 cut(s) 17
BssECI CCNNGG 3 cut(s) 54, 123, 153
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 54, 123
Bst2UI CCWGG 1 cut(s) 155
Bst6I CTCTTC 1 cut(s) 17
BstACI GRCGYC 1 cut(s) 5
BstENI CCTNNNNNAGG 1 cut(s) 116
BstH2I RGCGCY 1 cut(s) 73
BstHHI GCGC 1 cut(s) 72
BstNI CCWGG 1 cut(s) 155
BstSCI CCNGG 1 cut(s) 153
BstSLI GKGCMC 1 cut(s) 112
BsuRI GGCC 2 cut(s) 110, 122
CfoI GCGC 1 cut(s) 72
Cfr13I GGNCC 2 cut(s) 108, 109
CviAII CATG 2 cut(s) 105, 172
CviJI RGCY 7 cut(s) 49, 60, 80, 110, 122, 144, 190
CviKI_1 RGCY 7 cut(s) 49, 60, 80, 110, 122, 144, 190
Eam1104I CTCTTC 1 cut(s) 17
EarI CTCTTC 1 cut(s) 17
Eco130I CCWWGG 2 cut(s) 54, 123
Eco24I GRGCYC 2 cut(s) 62, 112
Eco47III AGCGCT 1 cut(s) 71
Eco57I CTGAAG 1 cut(s) 41
EcoNI CCTNNNNNAGG 1 cut(s) 116
EcoO109I RGGNCCY 1 cut(s) 109
EcoRII CCWGG 1 cut(s) 153
EcoT14I CCWWGG 2 cut(s) 54, 123
EcoT38I GRGCYC 2 cut(s) 62, 112
ErhI CCWWGG 2 cut(s) 54, 123
FaeI CATG 2 cut(s) 108, 175
FaiI YATR 4 cut(s) 106, 141, 173, 193
FatI CATG 2 cut(s) 104, 171
FauI CCCGC 1 cut(s) 143
FriOI GRGCYC 2 cut(s) 62, 112
GlaI GCGC 1 cut(s) 71
HaeII RGCGCY 1 cut(s) 73
HaeIII GGCC 2 cut(s) 110, 122
HhaI GCGC 1 cut(s) 72
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 2 cut(s) 108, 175
Hin6I GCGC 1 cut(s) 70
HinP1I GCGC 1 cut(s) 70
HphI GGTGA 1 cut(s) 124
Hpy188I TCNGA 3 cut(s) 21, 64, 181
Hpy188III TCNNGA 1 cut(s) 9
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 1 cut(s) 97
HpyCH4V TGCA 1 cut(s) 171
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 2 cut(s) 108, 175
HspAI GCGC 1 cut(s) 70
LguI GCTCTTC 1 cut(s) 17
LmnI GCTCC 2 cut(s) 67, 99
LpnPI CCDG 3 cut(s) 125, 140, 167
MboII GAAGA 1 cut(s) 34
MhlI GDGCHC 3 cut(s) 62, 104, 112
MnlI CCTC 2 cut(s) 58, 61
MslI CAYNNNNRTG 1 cut(s) 170
MspR9I CCNGG 1 cut(s) 155
MvaI CCWGG 1 cut(s) 155
NlaIII CATG 2 cut(s) 108, 175
NlaIV GGNNCC 2 cut(s) 110, 183
PciSI GCTCTTC 1 cut(s) 17
Psp6I CCWGG 1 cut(s) 153
PspGI CCWGG 1 cut(s) 153
PspN4I GGNNCC 2 cut(s) 110, 183
PspOMI GGGCCC 1 cut(s) 108
PspPI GGNCC 2 cut(s) 108, 109
RseI CAYNNNNRTG 1 cut(s) 170
SapI GCTCTTC 1 cut(s) 17
Sau96I GGNCC 2 cut(s) 108, 109
ScrFI CCNGG 1 cut(s) 155
SduI GDGCHC 3 cut(s) 62, 104, 112
SetI ASST 1 cut(s) 129
SmiMI CAYNNNNRTG 1 cut(s) 170
SsiI CCGC 1 cut(s) 136
StyD4I CCNGG 1 cut(s) 153
StyI CCWWGG 2 cut(s) 54, 123
TaqI TCGA 1 cut(s) 8
TspDTI ATGAA 2 cut(s) 136, 188
XagI CCTNNNNNAGG 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.