Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0009204

Physical Location & Seq

Genomic Coordinates Reverse (-)

4701470 .. 4702162

Gene Structure 693 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G065700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 222 bp

ATGGCGTCGAAGGTTACTCTGAAGAGCAAGGGCAAAACGACGAATAAGGGCTCCAAAGGCTCTGATGAGCGCTCGGTGGCCCAGTCCGTAAAGGAGTGGAGCACGTGGGCCATGAAGAAGGCGAAGGTCGTCACCCACTACGGCTTCATTCCCCTGATCATCGTCATCGGCATGAACTCGGAGCCTAAGCCACAGCTTTCTCAGCTTCTCAGCCCCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0016020 GO:0019867 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

Tom7

Protein Analysis

74

Amino Acids

7.96

Weight (kDa)

10.14

Isoelectric Point (pI)

29.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64220 AT5G41685
fragaria_vesca	FvH4_4g06260
malus_domestica	MD06G1130200.v1.1 MD12G1085900.v1.1 MD13G1234800.v1.1 MD15G1094200.v1.1 MD16G1239600.v1.1
prunus_persica	Prupe.1G065700_v2.0.a1
pyrus_communis	pycom13g20680
rosa_chinensis	RchiOBHm_Chr4g0397981
rosa_multiflora	Rmu_sc0001074.1_g000003
rosa_roxburghii	Rroxscaffold_5G00342940
rosa_rugosa	Rorug04G0005100
rosa_samantha	Rh4BG079400 Rh4CG089200 Rh4CG199400 Rh4DG074800 Rh4DG185600
rosa_wichuraiana	Rw0G019350 Rw4G006800 Rw4G015980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AcuI	CTGAAG	1 cut(s)	41
AcvI	CACGTG	1 cut(s)	105
AcyI	GRCGYC	1 cut(s)	5
AfeI	AGCGCT	1 cut(s)	71
AluBI	AGCT	2 cut(s)	196, 205
AluI	AGCT	2 cut(s)	196, 205
Alw21I	GWGCWC	1 cut(s)	104
Aor51HI	AGCGCT	1 cut(s)	71
AoxI	GGCC	2 cut(s)	78, 108
AspLEI	GCGC	1 cut(s)	72
AspS9I	GGNCC	2 cut(s)	79, 108
AsuHPI	GGTGA	1 cut(s)	124
BanII	GRGCYC	1 cut(s)	53
BbrPI	CACGTG	1 cut(s)	105
Bbv12I	GWGCWC	1 cut(s)	104
BceAI	ACGGC	1 cut(s)	157
BclI	TGATCA	1 cut(s)	156
BfoI	RGCGCY	1 cut(s)	73
BmgT120I	GGNCC	2 cut(s)	79, 108
BmiI	GGNNCC	2 cut(s)	52, 183
BmrI	ACTGGG	1 cut(s)	76
BmuI	ACTGGG	1 cut(s)	76
Bpu10I	CCTNAGC	1 cut(s)	186
BsaAI	YACGTR	1 cut(s)	105
BsaHI	GRCGYC	1 cut(s)	5
Bse1I	ACTGG	1 cut(s)	82
BseMII	CTCAG	1 cut(s)	215
BseNI	ACTGG	1 cut(s)	82
BshFI	GGCC	2 cut(s)	80, 110
BsiHKAI	GWGCWC	1 cut(s)	104
BsnI	GGCC	2 cut(s)	80, 110
Bsp1286I	GDGCHC	2 cut(s)	53, 104
Bsp143I	GATC	1 cut(s)	156
BspANI	GGCC	2 cut(s)	80, 110
BspCNI	CTCAG	2 cut(s)	214, 222
BspLI	GGNNCC	2 cut(s)	52, 183
BspQI	GCTCTTC	1 cut(s)	17
BsrI	ACTGG	1 cut(s)	82
BssMI	GATC	1 cut(s)	156
BssNI	GRCGYC	1 cut(s)	5
Bst6I	CTCTTC	1 cut(s)	17
BstACI	GRCGYC	1 cut(s)	5
BstBAI	YACGTR	1 cut(s)	105
BstDEI	CTNAG	3 cut(s)	186, 201, 209
BstH2I	RGCGCY	1 cut(s)	73
BstHHI	GCGC	1 cut(s)	72
BstKTI	GATC	1 cut(s)	159
BstMBI	GATC	1 cut(s)	156
BstMWI	GCNNNNNNNGC	2 cut(s)	57, 202
BsuRI	GGCC	2 cut(s)	80, 110
CfoI	GCGC	1 cut(s)	72
Cfr13I	GGNCC	2 cut(s)	79, 108
CviAII	CATG	2 cut(s)	112, 172
DdeI	CTNAG	3 cut(s)	186, 201, 209
DpnI	GATC	1 cut(s)	158
DpnII	GATC	1 cut(s)	156
Eam1104I	CTCTTC	1 cut(s)	17
EarI	CTCTTC	1 cut(s)	17
Eco24I	GRGCYC	1 cut(s)	53
Eco47III	AGCGCT	1 cut(s)	71
Eco57I	CTGAAG	1 cut(s)	41
Eco72I	CACGTG	1 cut(s)	105
EcoT38I	GRGCYC	1 cut(s)	53
FaeI	CATG	2 cut(s)	115, 175
FaiI	YATR	2 cut(s)	113, 173
FatI	CATG	2 cut(s)	111, 171
FbaI	TGATCA	1 cut(s)	156
FriOI	GRGCYC	1 cut(s)	53
GlaI	GCGC	1 cut(s)	71
HaeII	RGCGCY	1 cut(s)	73
HaeIII	GGCC	2 cut(s)	80, 110
HhaI	GCGC	1 cut(s)	72
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	2 cut(s)	115, 175
Hin6I	GCGC	1 cut(s)	70
HinP1I	GCGC	1 cut(s)	70
HphI	GGTGA	1 cut(s)	124
Hpy188I	TCNGA	4 cut(s)	21, 64, 181, 221
Hpy99I	CGWCG	2 cut(s)	10, 43
HpyAV	CCTTC	3 cut(s)	4, 112, 118
HpyCH4IV	ACGT	1 cut(s)	104
HpyF10VI	GCNNNNNNNGC	2 cut(s)	57, 202
HpyF3I	CTNAG	3 cut(s)	186, 201, 209
HpySE526I	ACGT	1 cut(s)	104
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	2 cut(s)	115, 175
HspAI	GCGC	1 cut(s)	70
Ksp22I	TGATCA	1 cut(s)	156
Kzo9I	GATC	1 cut(s)	156
LguI	GCTCTTC	1 cut(s)	17
LmnI	GCTCC	3 cut(s)	56, 99, 181
LpnPI	CCDG	2 cut(s)	95, 167
MaeII	ACGT	1 cut(s)	104
MaeIII	GTNAC	2 cut(s)	13, 130
MalI	GATC	1 cut(s)	158
MboI	GATC	1 cut(s)	156
MboII	GAAGA	2 cut(s)	34, 127
MhlI	GDGCHC	2 cut(s)	53, 104
MslI	CAYNNNNRTG	1 cut(s)	170
MwoI	GCNNNNNNNGC	2 cut(s)	57, 202
NdeII	GATC	1 cut(s)	156
NlaIII	CATG	2 cut(s)	115, 175
NlaIV	GGNNCC	2 cut(s)	52, 183
NmuCI	GTSAC	1 cut(s)	130
PciSI	GCTCTTC	1 cut(s)	17
PmaCI	CACGTG	1 cut(s)	105
PmlI	CACGTG	1 cut(s)	105
Ppu21I	YACGTR	1 cut(s)	105
PspCI	CACGTG	1 cut(s)	105
PspN4I	GGNNCC	2 cut(s)	52, 183
PspPI	GGNCC	2 cut(s)	79, 108
RseI	CAYNNNNRTG	1 cut(s)	170
SapI	GCTCTTC	1 cut(s)	17
Sau3AI	GATC	1 cut(s)	156
Sau96I	GGNCC	2 cut(s)	79, 108
SduI	GDGCHC	2 cut(s)	53, 104
SetI	ASST	5 cut(s)	15, 107, 129, 198, 207
SgeI	CNNG	9 cut(s)	40, 85, 94, 115, 117, 124, 166, 184, 190
SmiMI	CAYNNNNRTG	1 cut(s)	170
TaiI	ACGT	1 cut(s)	107
TaqI	TCGA	1 cut(s)	8
TseFI	GTSAC	1 cut(s)	130
Tsp45I	GTSAC	1 cut(s)	130
TspDTI	ATGAA	3 cut(s)	128, 136, 188
TspGWI	ACGGA	1 cut(s)	76

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.