MD12G1139300.v1.1

UNC93-like protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Forward (+)
21696246 .. 21700390
4145 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1139300.v1.1.491

Sequence Viewer

Length: 1317 bp
ATGGACTCGGCCGGTTTTCCCGACGAAGAGACGCCTCTGGTGCCGGATAATTCGCCGATTCAAAGCCAGAGGAATCATACCAGAGACGTTCATATTCTCAGCTGTGCCTTTTTGCTGATTTTCCTCGCTTATGGGGCCGCTCAGAATCTCGAGACAAGTGTCAACACGGAGGATGATTTGGGGACAATTTCACTTGGGATTTTGTATTTGTCTTTCACATTTTTCTCTATGGTGGCGTCTCCTGTTGTTCGAGCATTGGGATCGAAGAATGCTTTGATTCTTGGGACTACTGGCTATTGGTTGTTCATAGCTGCAAACTTGCTTCCCTCTTGGTATACTATGGTTCCGGCTGCTTTGTACTTGGGATTCGCTGCTTCGATAATATGGGTTGGGCAGGGGACATATCTAACTTCCACCGCGCGTAGTCATGCCAAAGATTATAATTTACATGAAGGAACAGTCATTGGCCACTTCAATGGAGAATTTTGGGGAATGTTTGCCACTAACCAGTTTGTGGGAAATCTTATATCACTTGCCGTGCTAAGAGATGGAACAGGGGGAAGTAATAATGGCACAACTGTATTGTTTAGTGTGTTTCTCATCATTGTGACTTTGGGTACCATACTGATGTGCTTCTTACATAAAGGGGAGGGTAGAACAGAGGAGGACACCCAGGATTCTTCTCCCAGCTTCTGTGCATCTCTGTTGTCTTTGTTAAAGACAATCGTTACTCCTTTGTATGATGTACGGATGTTATTGATCATCCCCCTCATGGTGTATTCAGGATTGCAACAAGCATTTGTGTGGGCCGAATACACCGAGTATATTGTTACTCCAACGCTTGGTGTGTCTGGCGTGGGTGGTGCAATGGCAGTTTATGGAGCTTTTGATGCAATCTGTTCACTGACTGCTGGTCGACTTACGTCCGGTCTCAAGTCCATCACTATTATAATTTCTGGTGGAGTCCTCCTTCAGGCTATAATATTCCTGTGGATTCTTCTGGGATACAGCGCGGAGAGTGGTGTACTCGGAATTGTCTACCCTCTTATAATGGCAGCTGTATTAGGTATTGGTGATGGAGTCTTAAACACACAGCTCAGTGCTTTGCTTGGTATATTCTTCAAGAGCGACACGGAAGGAGCATTTGCACAGCTCAAGGTCTGGCAGAGTGCTTCGACTGCAGTCGTCTTCTTTATCAGTTCATACATCTCATTGCAGGCAATGCTGATTGTTATGCTTGCCGCTATTGCAATCTCATACACCGCCTTTGTTTTTCTCACGCTTCGAGAGAAAGCGTCACCGTCTTCAACTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

439

Amino Acids

46.88

Weight (kDa)

4.9

Isoelectric Point (pI)

26.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 37 - 371 4e-06 Major Facilitator Superfamily
UNC-93 PF05978 61 - 424 2.5e-38 Ion channel regulatory protein UNC-93
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 441, 950, 1049
Acc65I GGTACC 1 cut(s) 617
AccB1I GGYRCC 2 cut(s) 40, 617
AccB7I CCANNNNNTGG 2 cut(s) 514, 842
AccBSI CCGCTC 1 cut(s) 140
AccI GTMKAC 3 cut(s) 335, 916, 1038
AccII CGCG 3 cut(s) 419, 421, 1013
AciI CCGC 5 cut(s) 138, 417, 1013, 1242, 1263
AclWI GGATC 1 cut(s) 268
AcoI YGGCCR 2 cut(s) 9, 466
AcsI RAATTY 1 cut(s) 482
AcuI CTGAAG 1 cut(s) 956
AcyI GRCGYC 2 cut(s) 32, 236
AfaI GTAC 4 cut(s) 359, 619, 747, 1026
AfiI CCNNNNNNNGG 4 cut(s) 514, 772, 842, 973
AgsI TTSAA 4 cut(s) 62, 475, 1123, 1308
AhdI GACNNNNNGTC 1 cut(s) 912
AjnI CCWGG 1 cut(s) 672
AluBI AGCT 7 cut(s) 102, 311, 690, 884, 1058, 1096, 1153
AluI AGCT 7 cut(s) 102, 311, 690, 884, 1058, 1096, 1153
Alw26I GTCTC 5 cut(s) 23, 78, 146, 243, 935
AlwI GGATC 1 cut(s) 268
AlwNI CAGNNNCTG 1 cut(s) 693
Ama87I CYCGRG 1 cut(s) 149
AoxI GGCC 4 cut(s) 9, 135, 466, 807
ApeKI GCWGC 4 cut(s) 311, 350, 371, 1055
ApoI RAATTY 1 cut(s) 482
Asp718I GGTACC 1 cut(s) 617
AspLEI GCGC 2 cut(s) 421, 1013
AspS9I GGNCC 2 cut(s) 135, 807
AsuHPI GGTGA 2 cut(s) 1085, 1290
AvaI CYCGRG 1 cut(s) 149
BalI TGGCCA 1 cut(s) 468
BanI GGYRCC 2 cut(s) 40, 617
BbsI GAAGAC 2 cut(s) 1180, 1296
BbvI GCAGC 4 cut(s) 298, 337, 358, 1067
BccI CCATC 3 cut(s) 542, 947, 1070
BceAI ACGGC 1 cut(s) 521
BcgI CGANNNNNNTGC 2 cut(s) 243, 277
BciT130I CCWGG 1 cut(s) 674
BciVI GTATCC 1 cut(s) 998
BclI TGATCA 1 cut(s) 759
BcoDI GTCTC 5 cut(s) 23, 78, 146, 243, 935
BfmI CTRYAG 1 cut(s) 1179
BfuI GTATCC 1 cut(s) 998
BisI GCNGC 6 cut(s) 138, 312, 351, 372, 1056, 1242
BlsI GCNGC 6 cut(s) 139, 313, 352, 373, 1057, 1243
Bme1390I CCNGG 1 cut(s) 674
BmeRI GACNNNNNGTC 1 cut(s) 912
BmeT110I CYCGRG 1 cut(s) 149
BmgT120I GGNCC 2 cut(s) 135, 807
BmiI GGNNCC 4 cut(s) 42, 136, 345, 619
BmrFI CCNGG 1 cut(s) 674
BmsI GCATC 2 cut(s) 707, 880
BoxI GACNNNNGTC 3 cut(s) 158, 922, 1181
BpiI GAAGAC 2 cut(s) 1180, 1296
BpuEI CTTGAG 2 cut(s) 917, 1139
BsaHI GRCGYC 2 cut(s) 32, 236
BsaI GGTCTC 1 cut(s) 935
BsaJI CCNNGG 1 cut(s) 672
BsaWI WCCGGW 1 cut(s) 926
Bsc4I CCNNNNNNNGG 4 cut(s) 514, 772, 842, 973
Bse118I RCCGGY 1 cut(s) 11
Bse1I ACTGG 2 cut(s) 295, 508
Bse3DI GCAATG 3 cut(s) 873, 1211, 1227
BseBI CCWGG 1 cut(s) 674
BseDI CCNNGG 1 cut(s) 672
BseGI GGATG 3 cut(s) 178, 756, 762
BseLI CCNNNNNNNGG 4 cut(s) 514, 772, 842, 973
BseMI GCAATG 3 cut(s) 873, 1211, 1227
BseMII CTCAG 3 cut(s) 112, 155, 1111
BseNI ACTGG 2 cut(s) 295, 508
BseRI GAGGAG 1 cut(s) 677
BseX3I CGGCCG 1 cut(s) 9
BseXI GCAGC 4 cut(s) 298, 337, 358, 1067
BseYI CCCAGC 1 cut(s) 686
Bsh1236I CGCG 3 cut(s) 419, 421, 1013
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 4 cut(s) 11, 137, 468, 809
BshNI GGYRCC 2 cut(s) 40, 617
BsiEI CGRYCG 1 cut(s) 12
BsiHKCI CYCGRG 1 cut(s) 149
BsiSI CCGG 4 cut(s) 12, 44, 347, 927
BslFI GGGAC 3 cut(s) 196, 298, 412
BslI CCNNNNNNNGG 4 cut(s) 514, 772, 842, 973
BsmAI GTCTC 5 cut(s) 23, 78, 146, 243, 935
BsmBI CGTCTC 3 cut(s) 23, 78, 243
BsmFI GGGAC 3 cut(s) 196, 298, 412
BsmI GAATGC 1 cut(s) 274
BsnI GGCC 4 cut(s) 11, 137, 468, 809
Bso31I GGTCTC 1 cut(s) 935
BsoBI CYCGRG 1 cut(s) 149
Bsp143I GATC 2 cut(s) 260, 759
BspACI CCGC 5 cut(s) 138, 417, 1013, 1242, 1263
BspANI GGCC 4 cut(s) 11, 137, 468, 809
BspCNI CTCAG 3 cut(s) 111, 154, 1110
BspFNI CGCG 3 cut(s) 419, 421, 1013
BspLI GGNNCC 4 cut(s) 42, 136, 345, 619
BspMAI CTGCAG 1 cut(s) 1183
BspPI GGATC 1 cut(s) 268
BspT107I GGYRCC 2 cut(s) 40, 617
BspTNI GGTCTC 1 cut(s) 935
BsrBI CCGCTC 1 cut(s) 140
BsrDI GCAATG 3 cut(s) 873, 1211, 1227
BsrFI RCCGGY 1 cut(s) 11
BsrI ACTGG 2 cut(s) 295, 508
BssAI RCCGGY 1 cut(s) 11
BssECI CCNNGG 1 cut(s) 672
BssMI GATC 2 cut(s) 260, 759
BssNAI GTATAC 1 cut(s) 336
BssNI GRCGYC 2 cut(s) 32, 236
Bst1107I GTATAC 1 cut(s) 336
Bst2UI CCWGG 1 cut(s) 674
Bst4CI ACNGT 3 cut(s) 460, 580, 1302
Bst6I CTCTTC 1 cut(s) 21
BstACI GRCGYC 2 cut(s) 32, 236
BstAPI GCANNNNNTGC 1 cut(s) 1222
BstC8I GCNNGC 2 cut(s) 1218, 1239
BstDEI CTNAG 4 cut(s) 98, 141, 542, 1097
BstENI CCTNNNNNAGG 1 cut(s) 971
BstF5I GGATG 3 cut(s) 178, 756, 762
BstFNI CGCG 3 cut(s) 419, 421, 1013
BstHHI GCGC 2 cut(s) 421, 1013
BstKTI GATC 2 cut(s) 263, 762
BstMAI GTCTC 5 cut(s) 23, 78, 146, 243, 935
BstMBI GATC 2 cut(s) 260, 759
BstMCI CGRYCG 1 cut(s) 12
BstMWI GCNNNNNNNGC 6 cut(s) 40, 134, 890, 1178, 1222, 1247
BstNI CCWGG 1 cut(s) 674
BstPAI GACNNNNGTC 3 cut(s) 158, 922, 1181
BstSCI CCNGG 1 cut(s) 672
BstSFI CTRYAG 1 cut(s) 1179
BstUI CGCG 3 cut(s) 419, 421, 1013
BstV1I GCAGC 4 cut(s) 298, 337, 358, 1067
BstV2I GAAGAC 2 cut(s) 1180, 1296
BstXI CCANNNNNNTGG 1 cut(s) 476
BstZ17I GTATAC 1 cut(s) 336
BstZI CGGCCG 1 cut(s) 9
BsuI GTATCC 1 cut(s) 998
BsuRI GGCC 4 cut(s) 11, 137, 468, 809
BtsCI GGATG 3 cut(s) 178, 756, 762
BtsIMutI CAGTG 2 cut(s) 902, 1105
Cac8I GCNNGC 2 cut(s) 1218, 1239
CaiI CAGNNNCTG 1 cut(s) 693
CfoI GCGC 2 cut(s) 421, 1013
Cfr10I RCCGGY 1 cut(s) 11
Cfr13I GGNCC 2 cut(s) 135, 807
CseI GACGC 3 cut(s) 40, 225, 1284
Csp6I GTAC 4 cut(s) 358, 618, 746, 1025
CviAII CATG 3 cut(s) 428, 449, 772
CviQI GTAC 4 cut(s) 358, 618, 746, 1025
DdeI CTNAG 4 cut(s) 98, 141, 542, 1097
DpnI GATC 2 cut(s) 262, 761
DpnII GATC 2 cut(s) 260, 759
DriI GACNNNNNGTC 1 cut(s) 912
EaeI YGGCCR 2 cut(s) 9, 466
EagI CGGCCG 1 cut(s) 9
Eam1104I CTCTTC 1 cut(s) 21
Eam1105I GACNNNNNGTC 1 cut(s) 912
EarI CTCTTC 1 cut(s) 21
EclXI CGGCCG 1 cut(s) 9
Eco31I GGTCTC 1 cut(s) 935
Eco52I CGGCCG 1 cut(s) 9
Eco57I CTGAAG 1 cut(s) 956
Eco88I CYCGRG 1 cut(s) 149
EcoNI CCTNNNNNAGG 1 cut(s) 971
EcoRII CCWGG 1 cut(s) 672
Esp3I CGTCTC 3 cut(s) 23, 78, 243
FaeI CATG 3 cut(s) 431, 452, 775
FaqI GGGAC 3 cut(s) 196, 298, 412
FatI CATG 3 cut(s) 427, 448, 771
FbaI TGATCA 1 cut(s) 759
FblI GTMKAC 3 cut(s) 335, 916, 1038
Fnu4HI GCNGC 6 cut(s) 138, 312, 351, 372, 1056, 1242
FokI GGATG 3 cut(s) 185, 749, 763
Fsp4HI GCNGC 6 cut(s) 138, 312, 351, 372, 1056, 1242
GlaI GCGC 2 cut(s) 420, 1012
GluI GCNGC 6 cut(s) 138, 312, 351, 372, 1056, 1242
GsaI CCCAGC 1 cut(s) 690
HaeIII GGCC 4 cut(s) 11, 137, 468, 809
HapII CCGG 4 cut(s) 12, 44, 347, 927
HgaI GACGC 3 cut(s) 40, 225, 1284
HhaI GCGC 2 cut(s) 421, 1013
Hin1I GRCGYC 2 cut(s) 32, 236
Hin1II CATG 3 cut(s) 431, 452, 775
Hin6I GCGC 2 cut(s) 419, 1011
HinP1I GCGC 2 cut(s) 419, 1011
HincII GTYRAC 2 cut(s) 163, 917
HindII GTYRAC 2 cut(s) 163, 917
HpaII CCGG 4 cut(s) 12, 44, 347, 927
HphI GGTGA 2 cut(s) 1085, 1290
Hpy166II GTNNAC 6 cut(s) 163, 336, 902, 917, 1025, 1039
Hpy188I TCNGA 2 cut(s) 144, 1031
Hpy188III TCNNGA 6 cut(s) 20, 149, 151, 783, 1123, 1286
Hpy8I GTNNAC 6 cut(s) 163, 336, 902, 917, 1025, 1039
Hpy99I CGWCG 1 cut(s) 26
HpyAV CCTTC 3 cut(s) 446, 980, 1130
HpyCH4III ACNGT 3 cut(s) 460, 580, 1302
HpyCH4IV ACGT 2 cut(s) 87, 923
HpyCH4V TGCA 9 cut(s) 314, 698, 790, 866, 893, 1148, 1181, 1216, 1250
HpyF10VI GCNNNNNNNGC 6 cut(s) 40, 134, 890, 1178, 1222, 1247
HpyF3I CTNAG 4 cut(s) 98, 141, 542, 1097
HpySE526I ACGT 2 cut(s) 87, 923
Hsp92I GRCGYC 2 cut(s) 32, 236
Hsp92II CATG 3 cut(s) 431, 452, 775
HspAI GCGC 2 cut(s) 419, 1011
KpnI GGTACC 1 cut(s) 621
Ksp22I TGATCA 1 cut(s) 759
Kzo9I GATC 2 cut(s) 260, 759
LmnI GCTCC 2 cut(s) 881, 1139
Lsp1109I GCAGC 4 cut(s) 298, 337, 358, 1067
LweI GCATC 2 cut(s) 707, 880
MaeII ACGT 2 cut(s) 87, 923
MaeIII GTNAC 4 cut(s) 607, 727, 829, 1296
MalI GATC 2 cut(s) 262, 761
MbiI CCGCTC 1 cut(s) 140
MboI GATC 2 cut(s) 260, 759
MboII GAAGA 7 cut(s) 38, 277, 672, 989, 1111, 1180, 1296
MlsI TGGCCA 1 cut(s) 468
MluCI AATT 6 cut(s) 49, 186, 442, 482, 951, 1032
MluNI TGGCCA 1 cut(s) 468
MlyI GAGTC 2 cut(s) 972, 1089
MmeI TCCRAC 1 cut(s) 860
Mox20I TGGCCA 1 cut(s) 468
MscI TGGCCA 1 cut(s) 468
MseI TTAA 2 cut(s) 716, 1085
MslI CAYNNNNRTG 4 cut(s) 474, 605, 626, 802
Msp20I TGGCCA 1 cut(s) 468
MspA1I CMGCKG 2 cut(s) 102, 1058
MspI CCGG 4 cut(s) 12, 44, 347, 927
MspR9I CCNGG 1 cut(s) 674
Mva1269I GAATGC 1 cut(s) 274
MvaI CCWGG 1 cut(s) 674
MvnI CGCG 3 cut(s) 419, 421, 1013
MwoI GCNNNNNNNGC 6 cut(s) 40, 134, 890, 1178, 1222, 1247
NdeII GATC 2 cut(s) 260, 759
NlaIII CATG 3 cut(s) 431, 452, 775
NlaIV GGNNCC 4 cut(s) 42, 136, 345, 619
NmuCI GTSAC 2 cut(s) 607, 1296
PaeR7I CTCGAG 1 cut(s) 149
PctI GAATGC 1 cut(s) 274
PfeI GAWTC 7 cut(s) 58, 73, 145, 277, 366, 677, 994
PflMI CCANNNNNTGG 2 cut(s) 514, 842
PkrI GCNGC 6 cut(s) 139, 313, 352, 373, 1057, 1243
PleI GAGTC 2 cut(s) 971, 1088
PpsI GAGTC 2 cut(s) 971, 1088
PshAI GACNNNNGTC 3 cut(s) 158, 922, 1181
PsiI TTATAA 3 cut(s) 441, 950, 1049
Psp6I CCWGG 1 cut(s) 672
PspFI CCCAGC 1 cut(s) 686
PspGI CCWGG 1 cut(s) 672
PspN4I GGNNCC 4 cut(s) 42, 136, 345, 619
PspPI GGNCC 2 cut(s) 135, 807
PstI CTGCAG 1 cut(s) 1183
PstNI CAGNNNCTG 1 cut(s) 693
PvuII CAGCTG 2 cut(s) 102, 1058
RsaI GTAC 4 cut(s) 359, 619, 747, 1026
RsaNI GTAC 4 cut(s) 358, 618, 746, 1025
RseI CAYNNNNRTG 4 cut(s) 474, 605, 626, 802
SalI GTCGAC 1 cut(s) 915
SaqAI TTAA 2 cut(s) 716, 1085
SatI GCNGC 6 cut(s) 138, 312, 351, 372, 1056, 1242
Sau3AI GATC 2 cut(s) 260, 759
Sau96I GGNCC 2 cut(s) 135, 807
SchI GAGTC 2 cut(s) 972, 1089
ScrFI CCNGG 1 cut(s) 674
SfaNI GCATC 2 cut(s) 707, 880
SfcI CTRYAG 1 cut(s) 1179
Sfr274I CTCGAG 1 cut(s) 149
SlaI CTCGAG 1 cut(s) 149
SmiMI CAYNNNNRTG 4 cut(s) 474, 605, 626, 802
SmlI CTYRAG 3 cut(s) 149, 932, 1154
SmoI CTYRAG 3 cut(s) 149, 932, 1154
Sse9I AATT 6 cut(s) 49, 186, 442, 482, 951, 1032
SsiI CCGC 5 cut(s) 138, 417, 1013, 1242, 1263
SspI AATATT 1 cut(s) 984
StyD4I CCNGG 1 cut(s) 672
TaaI ACNGT 3 cut(s) 460, 580, 1302
TaiI ACGT 2 cut(s) 90, 926
TaqI TCGA 7 cut(s) 150, 250, 263, 377, 916, 1175, 1285
TasI AATT 6 cut(s) 49, 186, 442, 482, 951, 1032
TatI WGTACW 2 cut(s) 357, 1024
TauI GCSGC 2 cut(s) 140, 1244
TfiI GAWTC 7 cut(s) 58, 73, 145, 277, 366, 677, 994
Tru1I TTAA 2 cut(s) 716, 1085
Tru9I TTAA 2 cut(s) 716, 1085
TscAI CASTG 2 cut(s) 909, 1105
TseFI GTSAC 2 cut(s) 607, 1296
TseI GCWGC 4 cut(s) 311, 350, 371, 1055
Tsp45I GTSAC 2 cut(s) 607, 1296
TspDTI ATGAA 4 cut(s) 80, 295, 465, 1191
TspGWI ACGGA 3 cut(s) 182, 763, 1148
TspRI CASTG 2 cut(s) 909, 1105
Van91I CCANNNNNTGG 2 cut(s) 514, 842
XagI CCTNNNNNAGG 1 cut(s) 971
XapI RAATTY 1 cut(s) 482
XhoI CTCGAG 1 cut(s) 149
XmiI GTMKAC 3 cut(s) 335, 916, 1038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.