RLG00000024522

UNC93-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0006088
Physical Location & Seq
Forward (+)
36660045 .. 36663070
3026 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024522

Sequence Viewer

Length: 1314 bp
ATGGCCCCTTCTCGCGACGAAGAGACGCCTCTCGTCGTCGCCGACGACTCGCCGGTCGAGGAGGGAAGGAGCCATACCAGAGATGTTCATATTATCAGCTCCGCGTTTCTGTTGATCTTTCTTGCTTACGGTGCTGCCCAGAATCTGGAGAGCACTGTCAACACTGAGGAGGATTTGGGAACGACGTCGCTTGGGATTTTGTACTTGTCGTTCACGTTTTTCTCTCTGGTGGCGTCTCCGGTGGTTAGGAAACTGGGACCAAAGAATGCTTTGATTCTCGGGACTACTGGGTATTGGTTGTTCATTGCTGCAAATTTGAAGCCAACTTGGTATACTATGGTTCCAGCCGCATTGTACCTTGGTTTTGCTGCTTCCATAATTTGGGTTGGCCAGGGGACATATTTGACTTCTACTGCACGTAGTCATGCCAAAGATAATAGCTTACATGAAGGAACGGTTATTGGCCACTTCAATGGAGAATTTTGGGGAATGTTTGCCAGTCACCAGTTTGTGGGAAATCTTATAACCCTCGCCTTGCTAAGAGATGGAACGGGGGGGAGTACTAATGGCACAACCTTATTATTCAGTGTGTTTCTTGTTAGTATGACCTTAGGTACCATACTGATGTGCTTCTTGAATAAAAGGGGTATTAAAGGAGAGGAGGACCCCCAGGGATCTTCTCCCAACTTTTATGCTTCTGTGGTATCTTTGTCAAAGACAGTCATCAGACCTTTGTATGATGTACGGATGCTATTGATCATCCCCCTTATGGCGTATTCAGGATTGCAACAAGCATTTGTATGGGCTGACTATACCGAGTATATTGTTAGTCCAACACTTGGTGTGTCTGGTGTTGGAGGTGCAATGGCAGTTTATGGGGCATGTGATGCAATATGTTCACTGGCTGCTGGTCGATTTACGTCTGGTCTCAAGTCCATCACTATTATAGTTTCTGCTGGAGCTTTCATTCAGACCATTATATACCTCTGGCTTCTTCTAATATACAGCCCAGTGAGCGGAGTACTTGGAACTGTATACCCTCTTATAATGGCAGCTGCATTGGGCATTGGTGATGGAGTCTTAAATACACAGCTCAGTGCTTTGCTTGCGATATACTTCAAGCATGATACTGAAGGAGCATTTGCACAGCTCAAGGTCTGGCAGAGTGGTACGATTTCAGCCATCTTCTTTATTAGTCCATACATCTCGTTACAGGCAATGCTGGTGGTTATGCTTGTTACAGTCTCTGTCGCATATGGTGCCTTTATGTATCTATCTATTCGAGAGAAAGCACTCTCCCGTTCAAGTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UNC-93

Protein Analysis

438

Amino Acids

46.92

Weight (kDa)

5.97

Isoelectric Point (pI)

31.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UNC-93 PF05978 58 - 419 1.7e-37 Ion channel regulatory protein UNC-93
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 524, 1046
AasI GACNNNNNNGTC 1 cut(s) 53
AatII GACGTC 1 cut(s) 188
Acc65I GGTACC 1 cut(s) 614
AccB1I GGYRCC 2 cut(s) 614, 1259
AccB7I CCANNNNNTGG 4 cut(s) 145, 381, 511, 839
AccBSI CCGCTC 1 cut(s) 1017
AccI GTMKAC 2 cut(s) 332, 1035
AccII CGCG 2 cut(s) 15, 104
AciI CCGC 3 cut(s) 102, 348, 1017
AclWI GGATC 1 cut(s) 682
AcoI YGGCCR 2 cut(s) 388, 463
AcsI RAATTY 2 cut(s) 313, 479
AcuI CTGAAG 1 cut(s) 1152
AcyI GRCGYC 3 cut(s) 26, 185, 233
AdeI CACNNNGTG 1 cut(s) 842
AfaI GTAC 7 cut(s) 203, 356, 562, 616, 744, 1023, 1171
AfiI CCNNNNNNNGG 6 cut(s) 145, 381, 511, 769, 839, 1016
AgsI TTSAA 5 cut(s) 319, 472, 637, 1120, 1305
AjnI CCWGG 2 cut(s) 390, 669
AluBI AGCT 6 cut(s) 99, 441, 962, 1055, 1093, 1150
AluI AGCT 6 cut(s) 99, 441, 962, 1055, 1093, 1150
Alw21I GWGCWC 1 cut(s) 155
Alw26I GTCTC 4 cut(s) 17, 240, 932, 1249
AlwI GGATC 1 cut(s) 682
AlwNI CAGNNNCTG 2 cut(s) 145, 1247
Ama87I CYCGRG 1 cut(s) 278
AoxI GGCC 3 cut(s) 3, 388, 463
ApeKI GCWGC 6 cut(s) 134, 308, 368, 905, 1052, 1055
ApoI RAATTY 2 cut(s) 313, 479
Asp718I GGTACC 1 cut(s) 614
AspS9I GGNCC 3 cut(s) 4, 257, 664
AsuHPI GGTGA 2 cut(s) 494, 1082
AvaI CYCGRG 1 cut(s) 278
AvaII GGWCC 2 cut(s) 257, 664
AxyI CCTNAGG 1 cut(s) 610
BalI TGGCCA 2 cut(s) 390, 465
BanI GGYRCC 2 cut(s) 614, 1259
BarI GAAGNNNNNNTAC 2 cut(s) 58, 90
Bbv12I GWGCWC 1 cut(s) 155
BbvI GCAGC 6 cut(s) 121, 295, 355, 892, 1042, 1064
BccI CCATC 4 cut(s) 539, 944, 1067, 1190
BciT130I CCWGG 2 cut(s) 392, 671
BclI TGATCA 1 cut(s) 756
BcoDI GTCTC 4 cut(s) 17, 240, 932, 1249
BisI GCNGC 7 cut(s) 135, 309, 348, 369, 906, 1053, 1056
BlsI GCNGC 7 cut(s) 136, 310, 349, 370, 907, 1054, 1057
BmcAI AGTACT 2 cut(s) 562, 1023
Bme1390I CCNGG 2 cut(s) 392, 671
Bme18I GGWCC 2 cut(s) 257, 664
BmeT110I CYCGRG 1 cut(s) 278
BmgT120I GGNCC 3 cut(s) 4, 257, 664
BmiI GGNNCC 7 cut(s) 6, 71, 258, 342, 616, 666, 1261
BmrFI CCNGG 2 cut(s) 392, 671
BmrI ACTGGG 3 cut(s) 263, 297, 1004
BmsI GCATC 2 cut(s) 738, 877
BmuI ACTGGG 3 cut(s) 263, 297, 1004
BpmI CTGGAG 2 cut(s) 167, 978
BpuEI CTTGAG 2 cut(s) 914, 1136
BsaAI YACGTR 1 cut(s) 419
BsaHI GRCGYC 3 cut(s) 26, 185, 233
BsaI GGTCTC 1 cut(s) 932
BsaJI CCNNGG 4 cut(s) 358, 391, 669, 670
BsaWI WCCGGW 1 cut(s) 238
Bsc4I CCNNNNNNNGG 6 cut(s) 145, 381, 511, 769, 839, 1016
Bse118I RCCGGY 1 cut(s) 52
Bse1I ACTGG 6 cut(s) 258, 292, 498, 505, 906, 1010
Bse21I CCTNAGG 1 cut(s) 610
Bse3DI GCAATG 3 cut(s) 303, 870, 1224
BseBI CCWGG 2 cut(s) 392, 671
BseDI CCNNGG 4 cut(s) 358, 391, 669, 670
BseGI GGATG 2 cut(s) 753, 759
BseLI CCNNNNNNNGG 6 cut(s) 145, 381, 511, 769, 839, 1016
BseMI GCAATG 3 cut(s) 303, 870, 1224
BseMII CTCAG 2 cut(s) 156, 1108
BseNI ACTGG 6 cut(s) 258, 292, 498, 505, 906, 1010
BseRI GAGGAG 3 cut(s) 74, 182, 674
BseXI GCAGC 6 cut(s) 121, 295, 355, 892, 1042, 1064
BsgI GTGCAG 1 cut(s) 399
Bsh1236I CGCG 2 cut(s) 15, 104
Bsh1285I CGRYCG 1 cut(s) 57
BshFI GGCC 3 cut(s) 5, 390, 465
BshNI GGYRCC 2 cut(s) 614, 1259
BsiEI CGRYCG 1 cut(s) 57
BsiHKAI GWGCWC 1 cut(s) 155
BsiHKCI CYCGRG 1 cut(s) 278
BsiSI CCGG 2 cut(s) 53, 239
BslFI GGGAC 3 cut(s) 270, 295, 409
BslI CCNNNNNNNGG 6 cut(s) 145, 381, 511, 769, 839, 1016
BsmAI GTCTC 4 cut(s) 17, 240, 932, 1249
BsmBI CGTCTC 2 cut(s) 17, 240
BsmFI GGGAC 3 cut(s) 270, 295, 409
BsmI GAATGC 1 cut(s) 271
BsnI GGCC 3 cut(s) 5, 390, 465
Bso31I GGTCTC 1 cut(s) 932
BsoBI CYCGRG 1 cut(s) 278
Bsp1286I GDGCHC 1 cut(s) 155
Bsp143I GATC 3 cut(s) 114, 674, 756
Bsp68I TCGCGA 1 cut(s) 15
BspACI CCGC 3 cut(s) 102, 348, 1017
BspANI GGCC 3 cut(s) 5, 390, 465
BspCNI CTCAG 2 cut(s) 157, 1107
BspFNI CGCG 2 cut(s) 15, 104
BspLI GGNNCC 7 cut(s) 6, 71, 258, 342, 616, 666, 1261
BspPI GGATC 1 cut(s) 682
BspT107I GGYRCC 2 cut(s) 614, 1259
BspTNI GGTCTC 1 cut(s) 932
BsrBI CCGCTC 1 cut(s) 1017
BsrDI GCAATG 3 cut(s) 303, 870, 1224
BsrFI RCCGGY 1 cut(s) 52
BsrI ACTGG 6 cut(s) 258, 292, 498, 505, 906, 1010
BssAI RCCGGY 1 cut(s) 52
BssECI CCNNGG 4 cut(s) 358, 391, 669, 670
BssMI GATC 3 cut(s) 114, 674, 756
BssNAI GTATAC 2 cut(s) 333, 1036
BssNI GRCGYC 3 cut(s) 26, 185, 233
BssT1I CCWWGG 1 cut(s) 358
Bst1107I GTATAC 2 cut(s) 333, 1036
Bst2UI CCWGG 2 cut(s) 392, 671
Bst4CI ACNGT 6 cut(s) 131, 157, 457, 721, 1033, 1243
Bst6I CTCTTC 1 cut(s) 15
BstACI GRCGYC 3 cut(s) 26, 185, 233
BstAPI GCANNNNNTGC 2 cut(s) 887, 1259
BstBAI YACGTR 1 cut(s) 419
BstC8I GCNNGC 1 cut(s) 1107
BstDEI CTNAG 4 cut(s) 165, 539, 610, 1094
BstF5I GGATG 2 cut(s) 753, 759
BstFNI CGCG 2 cut(s) 15, 104
BstKTI GATC 3 cut(s) 117, 677, 759
BstMAI GTCTC 4 cut(s) 17, 240, 932, 1249
BstMBI GATC 3 cut(s) 114, 674, 756
BstMCI CGRYCG 1 cut(s) 57
BstMWI GCNNNNNNNGC 5 cut(s) 131, 887, 1014, 1106, 1259
BstNI CCWGG 2 cut(s) 392, 671
BstNSI RCATGY 1 cut(s) 885
BstSCI CCNGG 2 cut(s) 390, 669
BstUI CGCG 2 cut(s) 15, 104
BstV1I GCAGC 6 cut(s) 121, 295, 355, 892, 1042, 1064
BstX2I RGATCY 1 cut(s) 674
BstXI CCANNNNNNTGG 1 cut(s) 473
BstYI RGATCY 1 cut(s) 674
BstZ17I GTATAC 2 cut(s) 333, 1036
Bsu36I CCTNAGG 1 cut(s) 610
BsuRI GGCC 3 cut(s) 5, 390, 465
BtsCI GGATG 2 cut(s) 753, 759
BtsIMutI CAGTG 6 cut(s) 153, 162, 592, 899, 1017, 1102
BtuMI TCGCGA 1 cut(s) 15
Cac8I GCNNGC 1 cut(s) 1107
CaiI CAGNNNCTG 2 cut(s) 145, 1247
Cfr10I RCCGGY 1 cut(s) 52
Cfr13I GGNCC 3 cut(s) 4, 257, 664
CseI GACGC 2 cut(s) 34, 222
Csp6I GTAC 7 cut(s) 202, 355, 561, 615, 743, 1022, 1170
CspCI CAANNNNNGTGG 2 cut(s) 1206, 1241
CviAII CATG 4 cut(s) 425, 446, 882, 1124
CviQI GTAC 7 cut(s) 202, 355, 561, 615, 743, 1022, 1170
DdeI CTNAG 4 cut(s) 165, 539, 610, 1094
DpnI GATC 3 cut(s) 116, 676, 758
DpnII GATC 3 cut(s) 114, 674, 756
DraIII CACNNNGTG 1 cut(s) 842
DrdI GACNNNNNNGTC 1 cut(s) 53
DseDI GACNNNNNNGTC 1 cut(s) 53
EaeI YGGCCR 2 cut(s) 388, 463
Eam1104I CTCTTC 1 cut(s) 15
EarI CTCTTC 1 cut(s) 15
Eco130I CCWWGG 1 cut(s) 358
Eco31I GGTCTC 1 cut(s) 932
Eco47I GGWCC 2 cut(s) 257, 664
Eco57I CTGAAG 1 cut(s) 1152
Eco81I CCTNAGG 1 cut(s) 610
Eco88I CYCGRG 1 cut(s) 278
EcoO109I RGGNCCY 1 cut(s) 664
EcoRII CCWGG 2 cut(s) 390, 669
EcoT14I CCWWGG 1 cut(s) 358
ErhI CCWWGG 1 cut(s) 358
Esp3I CGTCTC 2 cut(s) 17, 240
FaeI CATG 4 cut(s) 428, 449, 885, 1127
FaqI GGGAC 3 cut(s) 270, 295, 409
FatI CATG 4 cut(s) 424, 445, 881, 1123
FauNDI CATATG 1 cut(s) 1255
FbaI TGATCA 1 cut(s) 756
FblI GTMKAC 2 cut(s) 332, 1035
Fnu4HI GCNGC 7 cut(s) 135, 309, 348, 369, 906, 1053, 1056
FokI GGATG 2 cut(s) 746, 760
Fsp4HI GCNGC 7 cut(s) 135, 309, 348, 369, 906, 1053, 1056
GluI GCNGC 7 cut(s) 135, 309, 348, 369, 906, 1053, 1056
GsuI CTGGAG 2 cut(s) 167, 978
HaeIII GGCC 3 cut(s) 5, 390, 465
HapII CCGG 2 cut(s) 53, 239
HgaI GACGC 2 cut(s) 34, 222
Hin1I GRCGYC 3 cut(s) 26, 185, 233
Hin1II CATG 4 cut(s) 428, 449, 885, 1127
HincII GTYRAC 1 cut(s) 160
HindII GTYRAC 1 cut(s) 160
HinfI GANTC 4 cut(s) 47, 142, 274, 1077
HpaII CCGG 2 cut(s) 53, 239
HphI GGTGA 2 cut(s) 494, 1082
Hpy166II GTNNAC 5 cut(s) 160, 213, 333, 899, 1036
Hpy188I TCNGA 2 cut(s) 728, 972
Hpy188III TCNNGA 6 cut(s) 14, 146, 280, 634, 780, 1283
Hpy8I GTNNAC 5 cut(s) 160, 213, 333, 899, 1036
Hpy99I CGWCG 6 cut(s) 20, 38, 41, 47, 187, 190
HpyAV CCTTC 4 cut(s) 18, 60, 443, 1127
HpyCH4III ACNGT 6 cut(s) 131, 157, 457, 721, 1033, 1243
HpyCH4IV ACGT 4 cut(s) 185, 215, 418, 920
HpyCH4V TGCA 7 cut(s) 311, 416, 787, 863, 890, 1058, 1145
HpyF10VI GCNNNNNNNGC 5 cut(s) 131, 887, 1014, 1106, 1259
HpyF3I CTNAG 4 cut(s) 165, 539, 610, 1094
HpySE526I ACGT 4 cut(s) 185, 215, 418, 920
Hsp92I GRCGYC 3 cut(s) 26, 185, 233
Hsp92II CATG 4 cut(s) 428, 449, 885, 1127
KpnI GGTACC 1 cut(s) 618
Ksp22I TGATCA 1 cut(s) 756
Kzo9I GATC 3 cut(s) 114, 674, 756
LmnI GCTCC 4 cut(s) 69, 104, 959, 1136
Lsp1109I GCAGC 6 cut(s) 121, 295, 355, 892, 1042, 1064
LweI GCATC 2 cut(s) 738, 877
MaeII ACGT 4 cut(s) 185, 215, 418, 920
MaeIII GTNAC 3 cut(s) 500, 1209, 1237
MalI GATC 3 cut(s) 116, 676, 758
MbiI CCGCTC 1 cut(s) 1017
MboI GATC 3 cut(s) 114, 674, 756
MboII GAAGA 4 cut(s) 32, 669, 986, 1177
MflI RGATCY 1 cut(s) 674
MhlI GDGCHC 1 cut(s) 155
MlsI TGGCCA 2 cut(s) 390, 465
MluCI AATT 3 cut(s) 313, 378, 479
MluNI TGGCCA 2 cut(s) 390, 465
MlyI GAGTC 2 cut(s) 41, 1086
MmeI TCCRAC 2 cut(s) 835, 857
Mox20I TGGCCA 2 cut(s) 390, 465
MscI TGGCCA 2 cut(s) 390, 465
MseI TTAA 2 cut(s) 651, 1082
MslI CAYNNNNRTG 3 cut(s) 471, 623, 799
Msp20I TGGCCA 2 cut(s) 390, 465
MspA1I CMGCKG 1 cut(s) 1055
MspI CCGG 2 cut(s) 53, 239
MspR9I CCNGG 2 cut(s) 392, 671
Mva1269I GAATGC 1 cut(s) 271
MvaI CCWGG 2 cut(s) 392, 671
MvnI CGCG 2 cut(s) 15, 104
MwoI GCNNNNNNNGC 5 cut(s) 131, 887, 1014, 1106, 1259
NdeI CATATG 1 cut(s) 1255
NdeII GATC 3 cut(s) 114, 674, 756
NlaIII CATG 4 cut(s) 428, 449, 885, 1127
NlaIV GGNNCC 7 cut(s) 6, 71, 258, 342, 616, 666, 1261
NmuCI GTSAC 1 cut(s) 500
NruI TCGCGA 1 cut(s) 15
NspI RCATGY 1 cut(s) 885
PasI CCCWGGG 1 cut(s) 670
PcsI WCGNNNNNNNCGW 2 cut(s) 39, 42
PctI GAATGC 1 cut(s) 271
PfeI GAWTC 2 cut(s) 142, 274
PflMI CCANNNNNTGG 4 cut(s) 145, 381, 511, 839
PkrI GCNGC 7 cut(s) 136, 310, 349, 370, 907, 1054, 1057
PleI GAGTC 2 cut(s) 41, 1085
PpsI GAGTC 2 cut(s) 41, 1085
Ppu21I YACGTR 1 cut(s) 419
PpuMI RGGWCCY 1 cut(s) 664
PsiI TTATAA 2 cut(s) 524, 1046
Psp5II RGGWCCY 1 cut(s) 664
Psp6I CCWGG 2 cut(s) 390, 669
PspGI CCWGG 2 cut(s) 390, 669
PspN4I GGNNCC 7 cut(s) 6, 71, 258, 342, 616, 666, 1261
PspPI GGNCC 3 cut(s) 4, 257, 664
PspPPI RGGWCCY 1 cut(s) 664
PsrI GAACNNNNNNTAC 4 cut(s) 194, 226, 284, 316
PstNI CAGNNNCTG 2 cut(s) 145, 1247
PsuI RGATCY 1 cut(s) 674
PvuII CAGCTG 1 cut(s) 1055
RruI TCGCGA 1 cut(s) 15
RsaI GTAC 7 cut(s) 203, 356, 562, 616, 744, 1023, 1171
RsaNI GTAC 7 cut(s) 202, 355, 561, 615, 743, 1022, 1170
RseI CAYNNNNRTG 3 cut(s) 471, 623, 799
SaqAI TTAA 2 cut(s) 651, 1082
SatI GCNGC 7 cut(s) 135, 309, 348, 369, 906, 1053, 1056
Sau3AI GATC 3 cut(s) 114, 674, 756
Sau96I GGNCC 3 cut(s) 4, 257, 664
ScaI AGTACT 2 cut(s) 562, 1023
SchI GAGTC 2 cut(s) 41, 1086
ScrFI CCNGG 2 cut(s) 392, 671
SduI GDGCHC 1 cut(s) 155
SfaNI GCATC 2 cut(s) 738, 877
SinI GGWCC 2 cut(s) 257, 664
SmiMI CAYNNNNRTG 3 cut(s) 471, 623, 799
SmlI CTYRAG 2 cut(s) 929, 1151
SmoI CTYRAG 2 cut(s) 929, 1151
Sse9I AATT 3 cut(s) 313, 378, 479
SsiI CCGC 3 cut(s) 102, 348, 1017
StyD4I CCNGG 2 cut(s) 390, 669
StyI CCWWGG 1 cut(s) 358
TaaI ACNGT 6 cut(s) 131, 157, 457, 721, 1033, 1243
TaiI ACGT 4 cut(s) 188, 218, 421, 923
TaqI TCGA 3 cut(s) 57, 913, 1282
TasI AATT 3 cut(s) 313, 378, 479
TatI WGTACW 3 cut(s) 201, 560, 1021
TauI GCSGC 1 cut(s) 350
TfiI GAWTC 2 cut(s) 142, 274
Tru1I TTAA 2 cut(s) 651, 1082
Tru9I TTAA 2 cut(s) 651, 1082
TscAI CASTG 6 cut(s) 160, 169, 592, 906, 1017, 1102
TseFI GTSAC 1 cut(s) 500
TseI GCWGC 6 cut(s) 134, 308, 368, 905, 1052, 1055
Tsp45I GTSAC 1 cut(s) 500
TspDTI ATGAA 5 cut(s) 77, 292, 462, 955, 1299
TspGWI ACGGA 1 cut(s) 760
TspRI CASTG 6 cut(s) 160, 169, 592, 906, 1017, 1102
Van91I CCANNNNNTGG 4 cut(s) 145, 381, 511, 839
VpaK11BI GGWCC 2 cut(s) 257, 664
XapI RAATTY 2 cut(s) 313, 479
XceI RCATGY 1 cut(s) 885
XmiI GTMKAC 2 cut(s) 332, 1035
ZraI GACGTC 1 cut(s) 186
ZrmI AGTACT 2 cut(s) 562, 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.