Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006088

Physical Location & Seq

Genomic Coordinates Forward (+)

24595278 .. 24598491

Gene Structure 3214 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G251000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGGACTCTGCTGCTTCTCATGACCTAGAGAAGCCACTCCTTGTCAATGATTTGCCGGTTCTGAAAAGAAGGAGTCATGCAAGAGATGTTCATATTCTCAGCTGTGCTTTCTTGTTGATCTTTCTTGCTTTTGGTGCAACTCAAAACCTAGAGAGCACTCTCATCACTGAGAAGAACTTGGGTACCACTTCGCTTGGAATTTTGTATCTATCTTTCGCATTTTTCTCTTTGGTGGCATCCTCAGTGGTTCGATCACTGGGTTCAAAGAACTCTTTGATCCTTGGCACCACTGGCTACTGGTTGTTCATAGCTGCACATTTAAAACCAACCTGGTGTATAATGGTTCCAGTTTCTCTGTACCTTGGATTTGCCTCTGCAATAATATGGGTTGAGCAGGGGACATATCTAACTGCTGCGGCACGCAGTCATGCCAGAGATAATGGCTTGCATGAAGGAACTATTATTGGCAACTTCAATGGAGAATTTTGGGGAATGTTTGCATGTCGCCAGTTTGTTGGAAATCTTTTACCACTTGTCTTGCTCAGAGGTGGAACGGAGGGAAATCCAAGCAATACGACGCTATTGTTCACTGTGTTTCTCTGCAGTATGACCTTAGGTACCATACTGATGTGCTTCTTAAATAAAAGGGATGATGAAGAAGAGAAGGACCCCCATAATGCTGAATCTCTCAGCTTATATGCTTCTCTGTCATCTTTGTCAAAGTCAATCGTCGCTCCCATGTTTGATGTCCGGATGCTATTGATCATCCCCCTTATGGCCTATACAGGATTACAACAAGCATTCGTATGGGCTGAATTCACCAAGTATATCGTTAGTCCAATGCTCGGTGTGTCAGGTGTGGGTGGTGCAATGGCAGTTTATGGGGCTTTTGATGCAGCATGTTCACTCATTGCCGGCCGCCTTACCTCCGGTCTCAAGTCCATCACTCTTATCGTTTCTGGCGGAGCTTTTGTTCAGGCTGTCATATTCCTCTGGCTTCTTCTATGTTACAGCCCATCAAGTGGAATACTTGGAACCATAAACCTTCTCATAATGGCAGCTCTATTAGGGATTGGTGATGGAGTTTTCAACACACAGCTCAGTGCTCTGATTGGAATATTCTTCAAGGACGATATGGAAGGAGCATTTGCACAGCTCAAGGTGTGGCAGTGTAGTGCTGTTGCACTCATCTTCTTCATCAGTCCATACATCTCATTGCAAGCAATGCTGGTGCTTATGCTGTCTGCAGTCTGCCTCTCGTACACCGCCTTCGTTTACCTATCCCAGCAAGGAGAAAAAGCACTCTCACTTCAAGTTCAGGTTCAAGTTCAGGCTCAGGTTCATGATGTGTGCACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UNC-93

Protein Analysis

453

Amino Acids

48.88

Weight (kDa)

6.06

Isoelectric Point (pI)

30.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09470
fragaria_vesca	FvH4_6g14211 FvH4_6g14220
malus_domestica	MD04G1123300.v1.1 MD04G1123400.v1.1 MD12G1139300.v1.1
prunus_persica	Prupe.6G251000_v2.0.a1 Prupe.6G251000_v2.0.a1 Prupe.6G251100_v2.0.a1
pyrus_communis	pycom04g11130 pycom12g13360
rosa_chinensis	RchiOBHm_Chr3g0467171 RchiOBHm_Chr3g0467181
rosa_laevigata	RLG00000024521 RLG00000024522
rosa_multiflora	Rmu_sc0000962.1_g000075 Rmu_sc0000962.1_g000078
rosa_roxburghii	Rroxscaffold_6G00413840 Rroxscaffold_6G00413850
rosa_rugosa	Rorug03G0085600
rosa_samantha	Rh3AG133800 Rh3AG133900 Rh3CG154900 Rh3DG156000 Rh3DG156100
rosa_wichuraiana	Rw3G012660 Rw3G012670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	182, 617
AccB1I	GGYRCC	3 cut(s)	182, 284, 617
AccB7I	CCANNNNNTGG	1 cut(s)	1022
AccIII	TCCGGA	1 cut(s)	750
AciI	CCGC	4 cut(s)	416, 919, 963, 1266
AclWI	GGATC	1 cut(s)	271
AcoI	YGGCCR	1 cut(s)	916
AcsI	RAATTY	3 cut(s)	198, 482, 815
AfaI	GTAC	4 cut(s)	184, 359, 619, 1262
AfiI	CCNNNNNNNGG	3 cut(s)	775, 845, 1022
AgsI	TTSAA	6 cut(s)	264, 475, 1090, 1126, 1313, 1325
AjnI	CCWGG	1 cut(s)	329
AloI	GAACNNNNNNTCC	2 cut(s)	957, 989
AluBI	AGCT	7 cut(s)	102, 311, 693, 968, 1061, 1099, 1156
AluI	AGCT	7 cut(s)	102, 311, 693, 968, 1061, 1099, 1156
Alw21I	GWGCWC	3 cut(s)	158, 1108, 1355
Alw26I	GTCTC	1 cut(s)	938
Alw44I	GTGCAC	1 cut(s)	1351
AlwI	GGATC	1 cut(s)	271
Aor13HI	TCCGGA	1 cut(s)	750
AoxI	GGCC	2 cut(s)	777, 916
ApaLI	GTGCAC	1 cut(s)	1351
ApeKI	GCWGC	5 cut(s)	11, 311, 413, 896, 1058
ApoI	RAATTY	3 cut(s)	198, 482, 815
Asp718I	GGTACC	2 cut(s)	182, 617
AspS9I	GGNCC	1 cut(s)	667
AsuHPI	GGTGA	2 cut(s)	811, 1088
AvaII	GGWCC	1 cut(s)	667
AxyI	CCTNAGG	1 cut(s)	613
BaeGI	GKGCMC	1 cut(s)	1355
BaeI	ACNNNNGTAYC	2 cut(s)	166, 199
BanI	GGYRCC	3 cut(s)	182, 284, 617
BarI	GAAGNNNNNNTAC	2 cut(s)	1253, 1285
Bbv12I	GWGCWC	3 cut(s)	158, 1108, 1355
BbvI	GCAGC	4 cut(s)	298, 400, 908, 1070
BccI	CCATC	3 cut(s)	950, 1024, 1073
BciT130I	CCWGG	1 cut(s)	331
BclI	TGATCA	1 cut(s)	762
BcoDI	GTCTC	1 cut(s)	938
BfaI	CTAG	2 cut(s)	26, 149
BfmI	CTRYAG	2 cut(s)	601, 1245
BisI	GCNGC	7 cut(s)	12, 312, 414, 417, 897, 919, 1059
BlsI	GCNGC	7 cut(s)	13, 313, 415, 418, 898, 920, 1060
Bme1390I	CCNGG	1 cut(s)	331
Bme18I	GGWCC	1 cut(s)	667
BmgT120I	GGNCC	1 cut(s)	667
BmiI	GGNNCC	6 cut(s)	184, 286, 345, 619, 669, 1036
BmrFI	CCNGG	1 cut(s)	331
BmrI	ACTGGG	1 cut(s)	266
BmsI	GCATC	3 cut(s)	245, 744, 883
BmuI	ACTGGG	1 cut(s)	266
Bpu10I	CCTNAGC	1 cut(s)	1335
BpuEI	CTTGAG	2 cut(s)	920, 1142
BsaI	GGTCTC	1 cut(s)	938
BsaJI	CCNNGG	2 cut(s)	280, 361
BsaWI	WCCGGW	2 cut(s)	750, 929
BsaXI	ACNNNNNCTCC	2 cut(s)	957, 987
Bsc4I	CCNNNNNNNGG	3 cut(s)	775, 845, 1022
Bse118I	RCCGGY	2 cut(s)	55, 914
Bse1I	ACTGG	5 cut(s)	261, 295, 302, 347, 508
Bse21I	CCTNAGG	1 cut(s)	613
Bse3DI	GCAATG	4 cut(s)	876, 909, 1214, 1230
BseAI	TCCGGA	1 cut(s)	750
BseBI	CCWGG	1 cut(s)	331
BseDI	CCNNGG	2 cut(s)	280, 361
BseGI	GGATG	4 cut(s)	236, 655, 759, 765
BseLI	CCNNNNNNNGG	3 cut(s)	775, 845, 1022
BseMI	GCAATG	4 cut(s)	876, 909, 1214, 1230
BseMII	CTCAG	7 cut(s)	112, 159, 255, 556, 703, 1114, 1349
BseNI	ACTGG	5 cut(s)	261, 295, 302, 347, 508
BseSI	GKGCMC	1 cut(s)	1355
BseX3I	CGGCCG	1 cut(s)	916
BseXI	GCAGC	4 cut(s)	298, 400, 908, 1070
BseYI	CCCAGC	1 cut(s)	1284
BsgI	GTGCAG	1 cut(s)	297
Bsh1285I	CGRYCG	1 cut(s)	919
BshFI	GGCC	2 cut(s)	779, 918
BshNI	GGYRCC	3 cut(s)	182, 284, 617
BsiEI	CGRYCG	1 cut(s)	919
BsiHKAI	GWGCWC	3 cut(s)	158, 1108, 1355
BsiSI	CCGG	4 cut(s)	56, 751, 915, 930
BslFI	GGGAC	1 cut(s)	412
BslI	CCNNNNNNNGG	3 cut(s)	775, 845, 1022
BsmAI	GTCTC	1 cut(s)	938
BsmFI	GGGAC	1 cut(s)	412
BsmI	GAATGC	1 cut(s)	800
BsnI	GGCC	2 cut(s)	779, 918
Bso31I	GGTCTC	1 cut(s)	938
Bsp1286I	GDGCHC	3 cut(s)	158, 1108, 1355
Bsp13I	TCCGGA	1 cut(s)	750
Bsp143I	GATC	4 cut(s)	117, 251, 276, 762
BspACI	CCGC	4 cut(s)	416, 919, 963, 1266
BspANI	GGCC	2 cut(s)	779, 918
BspCNI	CTCAG	7 cut(s)	111, 160, 254, 555, 702, 1113, 1348
BspEI	TCCGGA	1 cut(s)	750
BspHI	TCATGA	2 cut(s)	19, 1342
BspLI	GGNNCC	6 cut(s)	184, 286, 345, 619, 669, 1036
BspMAI	CTGCAG	2 cut(s)	605, 1249
BspPI	GGATC	1 cut(s)	271
BspT107I	GGYRCC	3 cut(s)	182, 284, 617
BspTNI	GGTCTC	1 cut(s)	938
BsrDI	GCAATG	4 cut(s)	876, 909, 1214, 1230
BsrFI	RCCGGY	2 cut(s)	55, 914
BsrI	ACTGG	5 cut(s)	261, 295, 302, 347, 508
BssAI	RCCGGY	2 cut(s)	55, 914
BssECI	CCNNGG	2 cut(s)	280, 361
BssMI	GATC	4 cut(s)	117, 251, 276, 762
BssT1I	CCWWGG	2 cut(s)	280, 361
Bst2UI	CCWGG	1 cut(s)	331
Bst4CI	ACNGT	1 cut(s)	592
Bst6I	CTCTTC	1 cut(s)	654
BstAPI	GCANNNNNTGC	1 cut(s)	1225
BstC8I	GCNNGC	4 cut(s)	421, 446, 916, 1221
BstDEI	CTNAG	8 cut(s)	98, 168, 241, 542, 613, 689, 1100, 1335
BstF5I	GGATG	4 cut(s)	236, 655, 759, 765
BstKTI	GATC	4 cut(s)	120, 254, 279, 765
BstMAI	GTCTC	1 cut(s)	938
BstMBI	GATC	4 cut(s)	117, 251, 276, 762
BstMCI	CGRYCG	1 cut(s)	919
BstMWI	GCNNNNNNNGC	4 cut(s)	134, 291, 893, 1225
BstNI	CCWGG	1 cut(s)	331
BstNSI	RCATGY	2 cut(s)	504, 903
BstSCI	CCNGG	1 cut(s)	329
BstSFI	CTRYAG	2 cut(s)	601, 1245
BstSLI	GKGCMC	1 cut(s)	1355
BstV1I	GCAGC	4 cut(s)	298, 400, 908, 1070
BstXI	CCANNNNNNTGG	1 cut(s)	515
BstZI	CGGCCG	1 cut(s)	916
Bsu36I	CCTNAGG	1 cut(s)	613
BsuRI	GGCC	2 cut(s)	779, 918
BtsCI	GGATG	4 cut(s)	236, 655, 759, 765
BtsI	GCAGTG	1 cut(s)	1175
BtsIMutI	CAGTG	7 cut(s)	165, 249, 254, 288, 588, 1108, 1175
Cac8I	GCNNGC	4 cut(s)	421, 446, 916, 1221
CciI	TCATGA	2 cut(s)	19, 1342
Cfr10I	RCCGGY	2 cut(s)	55, 914
Cfr13I	GGNCC	1 cut(s)	667
CseI	GACGC	1 cut(s)	586
CsiI	ACCWGGT	1 cut(s)	329
Csp6I	GTAC	4 cut(s)	183, 358, 618, 1261
CspCI	CAANNNNNGTGG	4 cut(s)	175, 210, 519, 554
CviAII	CATG	9 cut(s)	20, 77, 428, 449, 501, 739, 900, 1343, 1356
CviQI	GTAC	4 cut(s)	183, 358, 618, 1261
DdeI	CTNAG	8 cut(s)	98, 168, 241, 542, 613, 689, 1100, 1335
DpnI	GATC	4 cut(s)	119, 253, 278, 764
DpnII	GATC	4 cut(s)	117, 251, 276, 762
DraI	TTTAAA	1 cut(s)	321
EaeI	YGGCCR	1 cut(s)	916
EagI	CGGCCG	1 cut(s)	916
Eam1104I	CTCTTC	1 cut(s)	654
EarI	CTCTTC	1 cut(s)	654
EciI	GGCGGA	1 cut(s)	978
EclXI	CGGCCG	1 cut(s)	916
Eco130I	CCWWGG	2 cut(s)	280, 361
Eco31I	GGTCTC	1 cut(s)	938
Eco47I	GGWCC	1 cut(s)	667
Eco52I	CGGCCG	1 cut(s)	916
Eco81I	CCTNAGG	1 cut(s)	613
EcoO109I	RGGNCCY	1 cut(s)	667
EcoRI	GAATTC	1 cut(s)	815
EcoRII	CCWGG	1 cut(s)	329
EcoT14I	CCWWGG	2 cut(s)	280, 361
ErhI	CCWWGG	2 cut(s)	280, 361
FaeI	CATG	9 cut(s)	23, 80, 431, 452, 504, 742, 903, 1346, 1359
FaqI	GGGAC	1 cut(s)	412
FatI	CATG	9 cut(s)	19, 76, 427, 448, 500, 738, 899, 1342, 1355
FbaI	TGATCA	1 cut(s)	762
Fnu4HI	GCNGC	7 cut(s)	12, 312, 414, 417, 897, 919, 1059
FokI	GGATG	4 cut(s)	223, 662, 752, 766
Fsp4HI	GCNGC	7 cut(s)	12, 312, 414, 417, 897, 919, 1059
FspBI	CTAG	2 cut(s)	26, 149
GluI	GCNGC	7 cut(s)	12, 312, 414, 417, 897, 919, 1059
GsaI	CCCAGC	1 cut(s)	1288
HaeIII	GGCC	2 cut(s)	779, 918
HapII	CCGG	4 cut(s)	56, 751, 915, 930
HgaI	GACGC	1 cut(s)	586
Hin1II	CATG	9 cut(s)	23, 80, 431, 452, 504, 742, 903, 1346, 1359
HinfI	GANTC	3 cut(s)	5, 73, 683
HpaII	CCGG	4 cut(s)	56, 751, 915, 930
HphI	GGTGA	2 cut(s)	811, 1088
Hpy166II	GTNNAC	5 cut(s)	588, 905, 1263, 1276, 1353
Hpy188I	TCNGA	3 cut(s)	63, 545, 1110
Hpy188III	TCNNGA	3 cut(s)	20, 751, 1343
Hpy8I	GTNNAC	5 cut(s)	588, 905, 1263, 1276, 1353
Hpy99I	CGWCG	2 cut(s)	580, 734
HpyAV	CCTTC	6 cut(s)	63, 446, 658, 1055, 1133, 1279
HpyCH4III	ACNGT	1 cut(s)	592
HpyF10VI	GCNNNNNNNGC	4 cut(s)	134, 291, 893, 1225
HpyF3I	CTNAG	8 cut(s)	98, 168, 241, 542, 613, 689, 1100, 1335
Hsp92II	CATG	9 cut(s)	23, 80, 431, 452, 504, 742, 903, 1346, 1359
Kpn2I	TCCGGA	1 cut(s)	750
KpnI	GGTACC	2 cut(s)	186, 621
KroI	GCCGGC	1 cut(s)	914
KroNI	GCCGGC	1 cut(s)	916
Ksp22I	TGATCA	1 cut(s)	762
Kzo9I	GATC	4 cut(s)	117, 251, 276, 762
LmnI	GCTCC	3 cut(s)	739, 965, 1142
Lsp1109I	GCAGC	4 cut(s)	298, 400, 908, 1070
LweI	GCATC	3 cut(s)	245, 744, 883
MabI	ACCWGGT	1 cut(s)	329
MaeI	CTAG	2 cut(s)	26, 149
MaeIII	GTNAC	1 cut(s)	1007
MalI	GATC	4 cut(s)	119, 253, 278, 764
MboI	GATC	4 cut(s)	117, 251, 276, 762
MboII	GAAGA	7 cut(s)	184, 668, 671, 992, 1114, 1183, 1186
MhlI	GDGCHC	3 cut(s)	158, 1108, 1355
MluCI	AATT	3 cut(s)	198, 482, 815
MlyI	GAGTC	1 cut(s)	82
MmeI	TCCRAC	1 cut(s)	496
MnlI	CCTC	7 cut(s)	250, 382, 539, 550, 937, 1001, 1265
MroI	TCCGGA	1 cut(s)	750
MroNI	GCCGGC	1 cut(s)	914
MseI	TTAA	2 cut(s)	320, 638
MslI	CAYNNNNRTG	2 cut(s)	626, 805
MspA1I	CMGCKG	1 cut(s)	102
MspI	CCGG	4 cut(s)	56, 751, 915, 930
MspR9I	CCNGG	1 cut(s)	331
Mva1269I	GAATGC	1 cut(s)	800
MvaI	CCWGG	1 cut(s)	331
MwoI	GCNNNNNNNGC	4 cut(s)	134, 291, 893, 1225
NaeI	GCCGGC	1 cut(s)	916
NdeII	GATC	4 cut(s)	117, 251, 276, 762
NgoMIV	GCCGGC	1 cut(s)	914
NlaIII	CATG	9 cut(s)	23, 80, 431, 452, 504, 742, 903, 1346, 1359
NlaIV	GGNNCC	6 cut(s)	184, 286, 345, 619, 669, 1036
NspI	RCATGY	2 cut(s)	504, 903
PagI	TCATGA	2 cut(s)	19, 1342
PctI	GAATGC	1 cut(s)	800
PdiI	GCCGGC	1 cut(s)	916
PfeI	GAWTC	1 cut(s)	683
PflMI	CCANNNNNTGG	1 cut(s)	1022
PkrI	GCNGC	7 cut(s)	13, 313, 415, 418, 898, 920, 1060
PleI	GAGTC	1 cut(s)	81
PpsI	GAGTC	1 cut(s)	81
PpuMI	RGGWCCY	1 cut(s)	667
Psp5II	RGGWCCY	1 cut(s)	667
Psp6I	CCWGG	1 cut(s)	329
PspFI	CCCAGC	1 cut(s)	1284
PspGI	CCWGG	1 cut(s)	329
PspN4I	GGNNCC	6 cut(s)	184, 286, 345, 619, 669, 1036
PspPI	GGNCC	1 cut(s)	667
PspPPI	RGGWCCY	1 cut(s)	667
PstI	CTGCAG	2 cut(s)	605, 1249
PvuII	CAGCTG	1 cut(s)	102
RsaI	GTAC	4 cut(s)	184, 359, 619, 1262
RsaNI	GTAC	4 cut(s)	183, 358, 618, 1261
RseI	CAYNNNNRTG	2 cut(s)	626, 805
SaqAI	TTAA	2 cut(s)	320, 638
SatI	GCNGC	7 cut(s)	12, 312, 414, 417, 897, 919, 1059
Sau3AI	GATC	4 cut(s)	117, 251, 276, 762
Sau96I	GGNCC	1 cut(s)	667
SchI	GAGTC	1 cut(s)	82
ScrFI	CCNGG	1 cut(s)	331
SduI	GDGCHC	3 cut(s)	158, 1108, 1355
SexAI	ACCWGGT	1 cut(s)	329
SfaNI	GCATC	3 cut(s)	245, 744, 883
SfcI	CTRYAG	2 cut(s)	601, 1245
SinI	GGWCC	1 cut(s)	667
SmiMI	CAYNNNNRTG	2 cut(s)	626, 805
SmlI	CTYRAG	2 cut(s)	935, 1157
SmoI	CTYRAG	2 cut(s)	935, 1157
Sse9I	AATT	3 cut(s)	198, 482, 815
SsiI	CCGC	4 cut(s)	416, 919, 963, 1266
SspI	AATATT	1 cut(s)	1119
SspMI	CTAG	2 cut(s)	26, 149
StyD4I	CCNGG	1 cut(s)	329
StyI	CCWWGG	2 cut(s)	280, 361
TaaI	ACNGT	1 cut(s)	592
TaqI	TCGA	1 cut(s)	250
TasI	AATT	3 cut(s)	198, 482, 815
TauI	GCSGC	2 cut(s)	419, 921
TfiI	GAWTC	1 cut(s)	683
Tru1I	TTAA	2 cut(s)	320, 638
Tru9I	TTAA	2 cut(s)	320, 638
TscAI	CASTG	7 cut(s)	172, 249, 261, 295, 595, 1108, 1175
TseI	GCWGC	5 cut(s)	11, 311, 413, 896, 1058
TspDTI	ATGAA	6 cut(s)	80, 295, 465, 669, 1186, 1331
TspGWI	ACGGA	1 cut(s)	569
TspRI	CASTG	7 cut(s)	172, 249, 261, 295, 595, 1108, 1175
Van91I	CCANNNNNTGG	1 cut(s)	1022
VneI	GTGCAC	1 cut(s)	1351
VpaK11BI	GGWCC	1 cut(s)	667
XapI	RAATTY	3 cut(s)	198, 482, 815
XceI	RCATGY	2 cut(s)	504, 903
XspI	CTAG	2 cut(s)	26, 149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.