RchiOBHm_Chr3g0467171

UNC93-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0006088
Physical Location & Seq
Reverse (-)
13408638 .. 13412256
3619 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43315

Sequence Viewer

Length: 1317 bp
ATGGCCCCTTCTTCTCGCGACGAAGAGACGCCTCTCGTCGTCGCCGACGACTCGCCGGTCGAGGAGGGAAGGAGTCATACCAGAGATGTTCATATTATCAGCTCCGCGTTTCTGTTGATCTTTCTTGCTTACGGTGCCGCCCAGAATCTGGAGAGCTCTGTCAACACTGAGGAGGATTTGGGAACGACGTCGCTTGGGATTTTGTACTTGTCGTTCACGTTTTTCTCTCTGGTGGCGTCTCCGGTGGTTAGGAAACTGGGACCAAAGAATGCTTTGATTCTTGGGACTACTGGGTATTGGTTGTTCATTGCTGCTAATTTGAAGCCAACCTGGTATACTATGGTTCCAGCTGCATTGTATCTGGGTTTTGCTGCTTCCATAATATGGGTTGGCCAGGGGACATATTTGACTTCTACTGCACGTAGTCATGCCAAAGATAATAGCTTACATGAAGGAACGGTTATTGGCCACTTCAATGGAGAATTTTGGGGAATGTTTGCCAGTCACCAGTTTGTGGGAAATCTTATAACCCTCGCCTTGCTAAGAGATGGAACAGGGGGGAGTACTAATGGCACAACCTTATTATTCAGTGTGTTTCTTGTTAGTATGACCTTAGGTACCATACTGATGTGCTTCTTGAATAAAAGGGGTATTAAAGGAGAGGAGGACCCCCAGGGATCTTCTCCCAACTTTTATGCTTCTGTGGTATCTTTGTCAAAGACAGTCATCAGACCTTTGTATGATGTACGGATGCTATTGATCATCCCCCTTATGGCGTATTCAGGATTGCAACAAGCATTTGTATGGGCTGACTATACCGAGTATATTGTTAGTCCAACACTTGGTGTGTCTGGTGTTGGAGGTGCAATGGCAGTTTATGGGGCATGTGATGCAATATGTTCATTGGCTGCTGGTCGATTTACGTCTGGTCTCAAGTCCATCACTATTATAGTTTCTGCTGGAGCTTTCATTCAGACCATTATATACCTCTGGCTTCTTCTAATATACAGCCCAGTGAGTGGAGTACTTGGAACTGTATACCCTCTTATAATGGCAGCTGCATTGGGCATTGGTGATGGAGTCTTAAATACACAGCTCAGTGCTTTGCTTGCGATATACTTCAAGCATGATACTGAAGGAGCATTTGCACAGCTCAAGGTCTGGCAGAGTTGTACGATTTCAGCCGTCTTCTTTATTAGTCCATACATCTCATTACAGGCAATGCTGGTGGTTATGCTTGTTACAGTCTCTGTCGCATATGGTGCCTTTATGTATCTATCTATTCGAGAGAAAGCACTCTCCCATTCAAGTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UNC-93

Protein Analysis

438

Amino Acids

47.01

Weight (kDa)

5.89

Isoelectric Point (pI)

33.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UNC-93 PF05978 59 - 420 2.9e-37 Ion channel regulatory protein UNC-93
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 527, 1049
AasI GACNNNNNNGTC 1 cut(s) 56
AatII GACGTC 1 cut(s) 191
Acc65I GGTACC 1 cut(s) 617
AccB1I GGYRCC 3 cut(s) 134, 617, 1262
AccB7I CCANNNNNTGG 5 cut(s) 148, 384, 514, 842, 1019
AccI GTMKAC 2 cut(s) 335, 1038
AccII CGCG 2 cut(s) 18, 107
AciI CCGC 2 cut(s) 105, 138
AclWI GGATC 1 cut(s) 685
AcoI YGGCCR 2 cut(s) 391, 466
AcsI RAATTY 1 cut(s) 482
AcuI CTGAAG 1 cut(s) 1155
AcyI GRCGYC 3 cut(s) 29, 188, 236
AdeI CACNNNGTG 1 cut(s) 845
AfaI GTAC 6 cut(s) 206, 565, 619, 747, 1026, 1174
AfiI CCNNNNNNNGG 6 cut(s) 148, 384, 514, 772, 842, 1019
AgsI TTSAA 5 cut(s) 322, 475, 640, 1123, 1308
AjnI CCWGG 3 cut(s) 329, 393, 672
AluBI AGCT 8 cut(s) 102, 156, 350, 444, 965, 1058, 1096, 1153
AluI AGCT 8 cut(s) 102, 156, 350, 444, 965, 1058, 1096, 1153
Alw21I GWGCWC 1 cut(s) 158
Alw26I GTCTC 4 cut(s) 20, 243, 935, 1252
AlwI GGATC 1 cut(s) 685
AlwNI CAGNNNCTG 2 cut(s) 148, 1250
AoxI GGCC 3 cut(s) 3, 391, 466
ApeKI GCWGC 6 cut(s) 311, 350, 371, 908, 1055, 1058
ApoI RAATTY 1 cut(s) 482
Asp718I GGTACC 1 cut(s) 617
AspS9I GGNCC 3 cut(s) 4, 260, 667
AsuHPI GGTGA 2 cut(s) 497, 1085
AvaII GGWCC 2 cut(s) 260, 667
AxyI CCTNAGG 1 cut(s) 613
BalI TGGCCA 2 cut(s) 393, 468
BanI GGYRCC 3 cut(s) 134, 617, 1262
BanII GRGCYC 1 cut(s) 158
BarI GAAGNNNNNNTAC 2 cut(s) 61, 93
BbsI GAAGAC 1 cut(s) 1180
Bbv12I GWGCWC 1 cut(s) 158
BbvI GCAGC 6 cut(s) 298, 337, 358, 895, 1045, 1067
BccI CCATC 3 cut(s) 542, 947, 1070
BceAI ACGGC 1 cut(s) 1169
BciT130I CCWGG 3 cut(s) 331, 395, 674
BclI TGATCA 1 cut(s) 759
BcoDI GTCTC 4 cut(s) 20, 243, 935, 1252
BisI GCNGC 7 cut(s) 138, 312, 351, 372, 909, 1056, 1059
BlsI GCNGC 7 cut(s) 139, 313, 352, 373, 910, 1057, 1060
BmcAI AGTACT 2 cut(s) 565, 1026
Bme1390I CCNGG 3 cut(s) 331, 395, 674
Bme18I GGWCC 2 cut(s) 260, 667
BmgT120I GGNCC 3 cut(s) 4, 260, 667
BmiI GGNNCC 7 cut(s) 6, 136, 261, 345, 619, 669, 1264
BmrFI CCNGG 3 cut(s) 331, 395, 674
BmrI ACTGGG 3 cut(s) 266, 300, 1007
BmsI GCATC 2 cut(s) 741, 880
BmuI ACTGGG 3 cut(s) 266, 300, 1007
BpiI GAAGAC 1 cut(s) 1180
BpmI CTGGAG 2 cut(s) 170, 981
BpuEI CTTGAG 2 cut(s) 917, 1139
BsaAI YACGTR 1 cut(s) 422
BsaHI GRCGYC 3 cut(s) 29, 188, 236
BsaI GGTCTC 1 cut(s) 935
BsaJI CCNNGG 3 cut(s) 394, 672, 673
BsaWI WCCGGW 1 cut(s) 241
Bsc4I CCNNNNNNNGG 6 cut(s) 148, 384, 514, 772, 842, 1019
Bse118I RCCGGY 1 cut(s) 55
Bse1I ACTGG 5 cut(s) 261, 295, 501, 508, 1013
Bse21I CCTNAGG 1 cut(s) 613
Bse3DI GCAATG 3 cut(s) 306, 873, 1227
BseBI CCWGG 3 cut(s) 331, 395, 674
BseDI CCNNGG 3 cut(s) 394, 672, 673
BseGI GGATG 2 cut(s) 756, 762
BseLI CCNNNNNNNGG 6 cut(s) 148, 384, 514, 772, 842, 1019
BseMI GCAATG 3 cut(s) 306, 873, 1227
BseMII CTCAG 2 cut(s) 159, 1111
BseNI ACTGG 5 cut(s) 261, 295, 501, 508, 1013
BseRI GAGGAG 3 cut(s) 77, 185, 677
BseXI GCAGC 6 cut(s) 298, 337, 358, 895, 1045, 1067
BsgI GTGCAG 1 cut(s) 402
Bsh1236I CGCG 2 cut(s) 18, 107
Bsh1285I CGRYCG 1 cut(s) 60
BshFI GGCC 3 cut(s) 5, 393, 468
BshNI GGYRCC 3 cut(s) 134, 617, 1262
BsiEI CGRYCG 1 cut(s) 60
BsiHKAI GWGCWC 1 cut(s) 158
BsiSI CCGG 2 cut(s) 56, 242
BslFI GGGAC 3 cut(s) 273, 298, 412
BslI CCNNNNNNNGG 6 cut(s) 148, 384, 514, 772, 842, 1019
BsmAI GTCTC 4 cut(s) 20, 243, 935, 1252
BsmBI CGTCTC 2 cut(s) 20, 243
BsmFI GGGAC 3 cut(s) 273, 298, 412
BsmI GAATGC 1 cut(s) 274
BsnI GGCC 3 cut(s) 5, 393, 468
Bso31I GGTCTC 1 cut(s) 935
Bsp1286I GDGCHC 1 cut(s) 158
Bsp143I GATC 3 cut(s) 117, 677, 759
Bsp68I TCGCGA 1 cut(s) 18
BspACI CCGC 2 cut(s) 105, 138
BspANI GGCC 3 cut(s) 5, 393, 468
BspCNI CTCAG 2 cut(s) 160, 1110
BspFNI CGCG 2 cut(s) 18, 107
BspLI GGNNCC 7 cut(s) 6, 136, 261, 345, 619, 669, 1264
BspPI GGATC 1 cut(s) 685
BspT107I GGYRCC 3 cut(s) 134, 617, 1262
BspTNI GGTCTC 1 cut(s) 935
BsrDI GCAATG 3 cut(s) 306, 873, 1227
BsrFI RCCGGY 1 cut(s) 55
BsrI ACTGG 5 cut(s) 261, 295, 501, 508, 1013
BssAI RCCGGY 1 cut(s) 55
BssECI CCNNGG 3 cut(s) 394, 672, 673
BssMI GATC 3 cut(s) 117, 677, 759
BssNAI GTATAC 2 cut(s) 336, 1039
BssNI GRCGYC 3 cut(s) 29, 188, 236
Bst1107I GTATAC 2 cut(s) 336, 1039
Bst2UI CCWGG 3 cut(s) 331, 395, 674
Bst4CI ACNGT 5 cut(s) 134, 460, 724, 1036, 1246
Bst6I CTCTTC 1 cut(s) 18
BstACI GRCGYC 3 cut(s) 29, 188, 236
BstAPI GCANNNNNTGC 2 cut(s) 890, 1262
BstBAI YACGTR 1 cut(s) 422
BstC8I GCNNGC 1 cut(s) 1110
BstDEI CTNAG 4 cut(s) 168, 542, 613, 1097
BstF5I GGATG 2 cut(s) 756, 762
BstFNI CGCG 2 cut(s) 18, 107
BstKTI GATC 3 cut(s) 120, 680, 762
BstMAI GTCTC 4 cut(s) 20, 243, 935, 1252
BstMBI GATC 3 cut(s) 117, 677, 759
BstMCI CGRYCG 1 cut(s) 60
BstMWI GCNNNNNNNGC 4 cut(s) 134, 890, 1109, 1262
BstNI CCWGG 3 cut(s) 331, 395, 674
BstNSI RCATGY 1 cut(s) 888
BstSCI CCNGG 3 cut(s) 329, 393, 672
BstUI CGCG 2 cut(s) 18, 107
BstV1I GCAGC 6 cut(s) 298, 337, 358, 895, 1045, 1067
BstV2I GAAGAC 1 cut(s) 1180
BstX2I RGATCY 1 cut(s) 677
BstXI CCANNNNNNTGG 1 cut(s) 476
BstYI RGATCY 1 cut(s) 677
BstZ17I GTATAC 2 cut(s) 336, 1039
Bsu36I CCTNAGG 1 cut(s) 613
BsuRI GGCC 3 cut(s) 5, 393, 468
BtsCI GGATG 2 cut(s) 756, 762
BtsIMutI CAGTG 4 cut(s) 165, 595, 1020, 1105
BtuMI TCGCGA 1 cut(s) 18
Cac8I GCNNGC 1 cut(s) 1110
CaiI CAGNNNCTG 2 cut(s) 148, 1250
Cfr10I RCCGGY 1 cut(s) 55
Cfr13I GGNCC 3 cut(s) 4, 260, 667
CseI GACGC 2 cut(s) 37, 225
CsiI ACCWGGT 1 cut(s) 329
Csp6I GTAC 6 cut(s) 205, 564, 618, 746, 1025, 1173
CspCI CAANNNNNGTGG 2 cut(s) 1209, 1244
CviAII CATG 4 cut(s) 428, 449, 885, 1127
CviQI GTAC 6 cut(s) 205, 564, 618, 746, 1025, 1173
DdeI CTNAG 4 cut(s) 168, 542, 613, 1097
DpnI GATC 3 cut(s) 119, 679, 761
DpnII GATC 3 cut(s) 117, 677, 759
DraIII CACNNNGTG 1 cut(s) 845
DrdI GACNNNNNNGTC 1 cut(s) 56
DseDI GACNNNNNNGTC 1 cut(s) 56
EaeI YGGCCR 2 cut(s) 391, 466
Eam1104I CTCTTC 1 cut(s) 18
EarI CTCTTC 1 cut(s) 18
Ecl136II GAGCTC 1 cut(s) 156
Eco24I GRGCYC 1 cut(s) 158
Eco31I GGTCTC 1 cut(s) 935
Eco47I GGWCC 2 cut(s) 260, 667
Eco53kI GAGCTC 1 cut(s) 156
Eco57I CTGAAG 1 cut(s) 1155
Eco81I CCTNAGG 1 cut(s) 613
EcoICRI GAGCTC 1 cut(s) 156
EcoO109I RGGNCCY 1 cut(s) 667
EcoRII CCWGG 3 cut(s) 329, 393, 672
EcoT38I GRGCYC 1 cut(s) 158
Esp3I CGTCTC 2 cut(s) 20, 243
FaeI CATG 4 cut(s) 431, 452, 888, 1130
FaqI GGGAC 3 cut(s) 273, 298, 412
FatI CATG 4 cut(s) 427, 448, 884, 1126
FauNDI CATATG 1 cut(s) 1258
FbaI TGATCA 1 cut(s) 759
FblI GTMKAC 2 cut(s) 335, 1038
Fnu4HI GCNGC 7 cut(s) 138, 312, 351, 372, 909, 1056, 1059
FokI GGATG 2 cut(s) 749, 763
FriOI GRGCYC 1 cut(s) 158
Fsp4HI GCNGC 7 cut(s) 138, 312, 351, 372, 909, 1056, 1059
GluI GCNGC 7 cut(s) 138, 312, 351, 372, 909, 1056, 1059
GsuI CTGGAG 2 cut(s) 170, 981
HaeIII GGCC 3 cut(s) 5, 393, 468
HapII CCGG 2 cut(s) 56, 242
HgaI GACGC 2 cut(s) 37, 225
Hin1I GRCGYC 3 cut(s) 29, 188, 236
Hin1II CATG 4 cut(s) 431, 452, 888, 1130
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HinfI GANTC 5 cut(s) 50, 73, 145, 277, 1080
HpaII CCGG 2 cut(s) 56, 242
HphI GGTGA 2 cut(s) 497, 1085
Hpy166II GTNNAC 4 cut(s) 163, 216, 336, 1039
Hpy188I TCNGA 2 cut(s) 731, 975
Hpy188III TCNNGA 5 cut(s) 17, 149, 637, 783, 1286
Hpy8I GTNNAC 4 cut(s) 163, 216, 336, 1039
Hpy99I CGWCG 6 cut(s) 23, 41, 44, 50, 190, 193
HpyAV CCTTC 4 cut(s) 18, 63, 446, 1130
HpyCH4III ACNGT 5 cut(s) 134, 460, 724, 1036, 1246
HpyCH4IV ACGT 4 cut(s) 188, 218, 421, 923
HpyCH4V TGCA 7 cut(s) 353, 419, 790, 866, 893, 1061, 1148
HpyF10VI GCNNNNNNNGC 4 cut(s) 134, 890, 1109, 1262
HpyF3I CTNAG 4 cut(s) 168, 542, 613, 1097
HpySE526I ACGT 4 cut(s) 188, 218, 421, 923
Hsp92I GRCGYC 3 cut(s) 29, 188, 236
Hsp92II CATG 4 cut(s) 431, 452, 888, 1130
KpnI GGTACC 1 cut(s) 621
Ksp22I TGATCA 1 cut(s) 759
Kzo9I GATC 3 cut(s) 117, 677, 759
LmnI GCTCC 3 cut(s) 107, 962, 1139
Lsp1109I GCAGC 6 cut(s) 298, 337, 358, 895, 1045, 1067
LweI GCATC 2 cut(s) 741, 880
MabI ACCWGGT 1 cut(s) 329
MaeII ACGT 4 cut(s) 188, 218, 421, 923
MaeIII GTNAC 2 cut(s) 503, 1240
MalI GATC 3 cut(s) 119, 679, 761
MboI GATC 3 cut(s) 117, 677, 759
MboII GAAGA 5 cut(s) 3, 35, 672, 989, 1180
MflI RGATCY 1 cut(s) 677
MhlI GDGCHC 1 cut(s) 158
MlsI TGGCCA 2 cut(s) 393, 468
MluCI AATT 2 cut(s) 316, 482
MluNI TGGCCA 2 cut(s) 393, 468
MlyI GAGTC 3 cut(s) 44, 82, 1089
MmeI TCCRAC 2 cut(s) 838, 860
Mox20I TGGCCA 2 cut(s) 393, 468
MscI TGGCCA 2 cut(s) 393, 468
MseI TTAA 2 cut(s) 654, 1085
MslI CAYNNNNRTG 3 cut(s) 474, 626, 802
Msp20I TGGCCA 2 cut(s) 393, 468
MspA1I CMGCKG 2 cut(s) 350, 1058
MspI CCGG 2 cut(s) 56, 242
MspR9I CCNGG 3 cut(s) 331, 395, 674
Mva1269I GAATGC 1 cut(s) 274
MvaI CCWGG 3 cut(s) 331, 395, 674
MvnI CGCG 2 cut(s) 18, 107
MwoI GCNNNNNNNGC 4 cut(s) 134, 890, 1109, 1262
NdeI CATATG 1 cut(s) 1258
NdeII GATC 3 cut(s) 117, 677, 759
NlaIII CATG 4 cut(s) 431, 452, 888, 1130
NlaIV GGNNCC 7 cut(s) 6, 136, 261, 345, 619, 669, 1264
NmuCI GTSAC 1 cut(s) 503
NruI TCGCGA 1 cut(s) 18
NspI RCATGY 1 cut(s) 888
PasI CCCWGGG 1 cut(s) 673
PcsI WCGNNNNNNNCGW 2 cut(s) 42, 45
PctI GAATGC 1 cut(s) 274
PfeI GAWTC 2 cut(s) 145, 277
PflMI CCANNNNNTGG 5 cut(s) 148, 384, 514, 842, 1019
PkrI GCNGC 7 cut(s) 139, 313, 352, 373, 910, 1057, 1060
PleI GAGTC 3 cut(s) 44, 81, 1088
PpsI GAGTC 3 cut(s) 44, 81, 1088
Ppu21I YACGTR 1 cut(s) 422
PpuMI RGGWCCY 1 cut(s) 667
PsiI TTATAA 2 cut(s) 527, 1049
Psp124BI GAGCTC 1 cut(s) 158
Psp5II RGGWCCY 1 cut(s) 667
Psp6I CCWGG 3 cut(s) 329, 393, 672
PspGI CCWGG 3 cut(s) 329, 393, 672
PspN4I GGNNCC 7 cut(s) 6, 136, 261, 345, 619, 669, 1264
PspPI GGNCC 3 cut(s) 4, 260, 667
PspPPI RGGWCCY 1 cut(s) 667
PsrI GAACNNNNNNTAC 4 cut(s) 197, 229, 287, 319
PstNI CAGNNNCTG 2 cut(s) 148, 1250
PsuI RGATCY 1 cut(s) 677
PvuII CAGCTG 2 cut(s) 350, 1058
RruI TCGCGA 1 cut(s) 18
RsaI GTAC 6 cut(s) 206, 565, 619, 747, 1026, 1174
RsaNI GTAC 6 cut(s) 205, 564, 618, 746, 1025, 1173
RseI CAYNNNNRTG 3 cut(s) 474, 626, 802
SacI GAGCTC 1 cut(s) 158
SaqAI TTAA 2 cut(s) 654, 1085
SatI GCNGC 7 cut(s) 138, 312, 351, 372, 909, 1056, 1059
Sau3AI GATC 3 cut(s) 117, 677, 759
Sau96I GGNCC 3 cut(s) 4, 260, 667
ScaI AGTACT 2 cut(s) 565, 1026
SchI GAGTC 3 cut(s) 44, 82, 1089
ScrFI CCNGG 3 cut(s) 331, 395, 674
SduI GDGCHC 1 cut(s) 158
SexAI ACCWGGT 1 cut(s) 329
SfaNI GCATC 2 cut(s) 741, 880
SinI GGWCC 2 cut(s) 260, 667
SmiMI CAYNNNNRTG 3 cut(s) 474, 626, 802
SmlI CTYRAG 2 cut(s) 932, 1154
SmoI CTYRAG 2 cut(s) 932, 1154
Sse9I AATT 2 cut(s) 316, 482
SsiI CCGC 2 cut(s) 105, 138
SstI GAGCTC 1 cut(s) 158
StyD4I CCNGG 3 cut(s) 329, 393, 672
TaaI ACNGT 5 cut(s) 134, 460, 724, 1036, 1246
TaiI ACGT 4 cut(s) 191, 221, 424, 926
TaqI TCGA 3 cut(s) 60, 916, 1285
TasI AATT 2 cut(s) 316, 482
TatI WGTACW 3 cut(s) 204, 563, 1024
TauI GCSGC 1 cut(s) 140
TfiI GAWTC 2 cut(s) 145, 277
Tru1I TTAA 2 cut(s) 654, 1085
Tru9I TTAA 2 cut(s) 654, 1085
TscAI CASTG 4 cut(s) 172, 595, 1020, 1105
TseFI GTSAC 1 cut(s) 503
TseI GCWGC 6 cut(s) 311, 350, 371, 908, 1055, 1058
Tsp45I GTSAC 1 cut(s) 503
TspDTI ATGAA 6 cut(s) 80, 295, 465, 891, 958, 1302
TspGWI ACGGA 1 cut(s) 763
TspRI CASTG 4 cut(s) 172, 595, 1020, 1105
Van91I CCANNNNNTGG 5 cut(s) 148, 384, 514, 842, 1019
VpaK11BI GGWCC 2 cut(s) 260, 667
XapI RAATTY 1 cut(s) 482
XceI RCATGY 1 cut(s) 888
XmiI GTMKAC 2 cut(s) 335, 1038
ZraI GACGTC 1 cut(s) 189
ZrmI AGTACT 2 cut(s) 565, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.