Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0012488

Physical Location & Seq

Genomic Coordinates Reverse (-)

15819113 .. 15822279

Gene Structure 3167 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1185900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1128 bp

ATGGCGTCTTTAGCTCCCTCTTCTTCTCTTAACCCAAAACCAGTCTCAGCTGCGCCTTCGTCCTCCCCGGATCTTCTCGACGACTCCAACGAAGACTCCTGCAGCATCTGCCTCGAGCCCTTCAACTGCGACGACCCAGCAACTATAACCAGCTGCAAACACGAATATCATCTTCACTGTATATTAGAATGGTCACAAAGAAGTAAAGAATGCCCAATTTGTTGGCAGTTATTTTCCCTGAAGGATCCTGCTTGCCAAGGGCTTCTAACTGCTATACAAAATGAGAGGAACTCAAGGTCAAGAAAAACATCTTCCATGGCACCCCAAACTTATCATTCATCTGAGGACTTTGATGTTGAGCACGAATCTTTCTCAGATGACTCCGATTTGGATGAGCGCATCATGCAGCATCTTGCTGCTGCTTCTAGCAGAGCTCGTTATGCTCGCAGAAGGGAAAGACAGAGATCATCTGGGCTAGGTCCTTCCCATGTTTTTGTTTTTTCCAATCATGAAAATGTGCCTGGTTTCCAGCAAACATACCCAATTTCTCCAAAAGATTCGCCAACTTCTCAAAGACCATCAGTTATTCAATCTCCACCATCTTTTATCTGCAGTACTGCTGCCAATAGTGATATCCCTTACAAACCAAGAGTGCTTTATGGCCGACCATCACCTGATGGTCCACACAGACCAAGCCCATCCGAGACTATCAATTTGCCTGATTCTATCAAATCCACGTTGTCTGCTGCCTCAGCAAGATACAAAGAGTCAATCTCAAGAAGCACTCGAGGCTTTAAGGAAAAGCTACTTGCTCGTAACAACTCAGTCAAGGAGCTGAGCAAAGGAGTTCAACGTGAGATGAATGCAGGAATTGCTGGTGTTGCAAGAATGTTTGAGCGCTTCGACCTTACTCCAAAGAAACCTGGAGCCCCTACTCCTGTTTCTGGCCCTAGCGGAGGAGGGACTTCAAACTTATCCTTCAAGGGAAAAGGTGTGCTAGAGACTGTTATTGTTCATTCTTGTAATAATAATGGGAGAGTTGGTGATGAAAGTTCAGATGCACCCTCTGGTGTCAAAGCTGCTACGGCAGACCGAGTTGAAGTTTCTTCTGCACAGAGCGGACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009553 GO:0009555 GO:0009561 GO:0009987 GO:0010498 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0051603 GO:0051726 GO:0055046 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_2 zf-RING_2 zf-rbx1

Protein Analysis

376

Amino Acids

40.64

Weight (kDa)

7.6

Isoelectric Point (pI)

60.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-rbx1	PF12678	31 - 74	4.4e-07	RING-H2 zinc finger domain
zf-RING_2	PF13639	32 - 74	2.6e-09	Ring finger domain
zf-C3HC4_2	PF13923	34 - 74	8.6e-06	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	34 - 61	6.4e-06	RING-like zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14220
fragaria_vesca	FvH4_4g14860
malus_domestica	MD13G1185900.v1.1 MD16G1186700.v1.1
prunus_persica	Prupe.1G153500_v2.0.a1
pyrus_communis	pycom13g16040 pycom16g15650
rosa_chinensis	RchiOBHm_Chr4g0417351 RchiOBHm_Chr4g0417381
rosa_laevigata	RLG00000007915
rosa_multiflora	Rmu_co8127690.1_g000001 Rmu_sc0004142.1_g000031
rosa_roxburghii	Rroxscaffold_5G00361110
rosa_rugosa	Rorug04G0147200
rosa_samantha	Rh4AG210700 Rh4BG211200 Rh4CG221600 Rh4DG208600
rosa_wichuraiana	Rw4G017800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	319
AccBSI	CCGCTC	1 cut(s)	1119
AciI	CCGC	2 cut(s)	954, 1119
AclWI	GGATC	3 cut(s)	78, 239, 252
AcoI	YGGCCR	1 cut(s)	661
AcuI	CTGAAG	1 cut(s)	260
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	1 cut(s)	616
AfeI	AGCGCT	1 cut(s)	899
AfiI	CCNNNNNNNGG	2 cut(s)	944, 956
AgsI	TTSAA	6 cut(s)	124, 590, 851, 969, 982, 1100
AjnI	CCWGG	2 cut(s)	520, 922
AluBI	AGCT	7 cut(s)	14, 50, 153, 434, 805, 835, 1079
AluI	AGCT	7 cut(s)	14, 50, 153, 434, 805, 835, 1079
Alw21I	GWGCWC	2 cut(s)	363, 436
Alw26I	GTCTC	3 cut(s)	49, 698, 995
AlwI	GGATC	3 cut(s)	78, 239, 252
AlwNI	CAGNNNCTG	1 cut(s)	108
Ama87I	CYCGRG	2 cut(s)	113, 786
Aor51HI	AGCGCT	1 cut(s)	899
AoxI	GGCC	2 cut(s)	661, 946
ApeKI	GCWGC	9 cut(s)	50, 102, 153, 406, 416, 419, 620, 746, 1079
ArsI	GACNNNNNNTTYG	2 cut(s)	697, 729
AspLEI	GCGC	3 cut(s)	55, 399, 900
AspS9I	GGNCC	3 cut(s)	479, 680, 947
AsuC2I	CCSGG	1 cut(s)	68
AsuHPI	GGTGA	2 cut(s)	663, 1055
AvaI	CYCGRG	2 cut(s)	113, 786
AvaII	GGWCC	2 cut(s)	479, 680
BamHI	GGATCC	1 cut(s)	244
BanI	GGYRCC	1 cut(s)	319
BanII	GRGCYC	3 cut(s)	120, 436, 931
BbsI	GAAGAC	1 cut(s)	99
Bbv12I	GWGCWC	2 cut(s)	363, 436
BbvCI	CCTCAGC	1 cut(s)	751
BbvI	GCAGC	9 cut(s)	37, 114, 140, 403, 406, 418, 607, 733, 1066
BccI	CCATC	5 cut(s)	586, 607, 671, 676, 706
BceAI	ACGGC	1 cut(s)	1101
BcgI	CGANNNNNNTGC	2 cut(s)	94, 128
BciT130I	CCWGG	2 cut(s)	522, 924
BcnI	CCSGG	1 cut(s)	68
BcoDI	GTCTC	3 cut(s)	49, 698, 995
BfaI	CTAG	4 cut(s)	426, 476, 951, 998
BfmI	CTRYAG	2 cut(s)	100, 610
BfoI	RGCGCY	1 cut(s)	901
BisI	GCNGC	9 cut(s)	51, 103, 154, 407, 417, 420, 621, 747, 1080
BlpI	GCTNAGC	1 cut(s)	836
BlsI	GCNGC	9 cut(s)	52, 104, 155, 408, 418, 421, 622, 748, 1081
BmcAI	AGTACT	1 cut(s)	616
Bme1390I	CCNGG	3 cut(s)	68, 522, 924
Bme18I	GGWCC	2 cut(s)	479, 680
BmeT110I	CYCGRG	2 cut(s)	113, 786
BmgT120I	GGNCC	3 cut(s)	479, 680, 947
BmiI	GGNNCC	3 cut(s)	246, 321, 928
BmrFI	CCNGG	3 cut(s)	68, 522, 924
BmsI	GCATC	4 cut(s)	114, 408, 418, 1048
BpiI	GAAGAC	1 cut(s)	99
BplI	GAGNNNNNCTC	4 cut(s)	275, 307, 758, 790
BpmI	CTGGAG	1 cut(s)	945
Bpu10I	CCTNAGC	1 cut(s)	751
Bpu1102I	GCTNAGC	1 cut(s)	836
BpuEI	CTTGAG	2 cut(s)	277, 760
BpuMI	CCSGG	1 cut(s)	68
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	3 cut(s)	66, 256, 315
BsaXI	ACNNNNNCTCC	4 cut(s)	80, 110, 1027, 1057
Bsc4I	CCNNNNNNNGG	2 cut(s)	944, 956
Bse1I	ACTGG	1 cut(s)	41
BseBI	CCWGG	2 cut(s)	522, 924
BseDI	CCNNGG	3 cut(s)	66, 256, 315
BseGI	GGATG	2 cut(s)	397, 698
BseLI	CCNNNNNNNGG	2 cut(s)	944, 956
BseMII	CTCAG	6 cut(s)	60, 333, 387, 765, 827, 837
BseNI	ACTGG	1 cut(s)	41
BseRI	GAGGAG	1 cut(s)	972
BseXI	GCAGC	9 cut(s)	37, 114, 140, 403, 406, 418, 607, 733, 1066
BseYI	CCCAGC	1 cut(s)	136
BsgI	GTGCAG	1 cut(s)	1095
BshFI	GGCC	2 cut(s)	663, 948
BshNI	GGYRCC	1 cut(s)	319
BsiHKAI	GWGCWC	2 cut(s)	363, 436
BsiHKCI	CYCGRG	2 cut(s)	113, 786
BsiSI	CCGG	1 cut(s)	68
BslFI	GGGAC	1 cut(s)	976
BslI	CCNNNNNNNGG	2 cut(s)	944, 956
BsmAI	GTCTC	3 cut(s)	49, 698, 995
BsmFI	GGGAC	1 cut(s)	976
BsmI	GAATGC	2 cut(s)	215, 868
BsnI	GGCC	2 cut(s)	663, 948
BsoBI	CYCGRG	2 cut(s)	113, 786
Bsp1286I	GDGCHC	4 cut(s)	120, 363, 436, 931
Bsp143I	GATC	3 cut(s)	70, 244, 464
Bsp1720I	GCTNAGC	1 cut(s)	836
Bsp19I	CCATGG	1 cut(s)	315
BspACI	CCGC	2 cut(s)	954, 1119
BspANI	GGCC	2 cut(s)	663, 948
BspCNI	CTCAG	6 cut(s)	59, 334, 386, 764, 828, 836
BspHI	TCATGA	1 cut(s)	508
BspLI	GGNNCC	3 cut(s)	246, 321, 928
BspMAI	CTGCAG	2 cut(s)	104, 614
BspPI	GGATC	3 cut(s)	78, 239, 252
BspT107I	GGYRCC	1 cut(s)	319
BsrBI	CCGCTC	1 cut(s)	1119
BsrI	ACTGG	1 cut(s)	41
BssECI	CCNNGG	3 cut(s)	66, 256, 315
BssMI	GATC	3 cut(s)	70, 244, 464
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	256, 315
Bst2UI	CCWGG	2 cut(s)	522, 924
Bst4CI	ACNGT	2 cut(s)	179, 1006
Bst6I	CTCTTC	1 cut(s)	25
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	2 cut(s)	108, 872
BstC8I	GCNNGC	2 cut(s)	253, 445
BstDEI	CTNAG	6 cut(s)	46, 342, 373, 751, 823, 836
BstDSI	CCRYGG	1 cut(s)	315
BstENI	CCTNNNNNAGG	1 cut(s)	954
BstF5I	GGATG	2 cut(s)	397, 698
BstH2I	RGCGCY	1 cut(s)	901
BstHHI	GCGC	3 cut(s)	55, 399, 900
BstKTI	GATC	3 cut(s)	73, 247, 467
BstMAI	GTCTC	3 cut(s)	49, 698, 995
BstMBI	GATC	3 cut(s)	70, 244, 464
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 108, 403, 440, 752, 789, 872, 881, 1085
BstNI	CCWGG	2 cut(s)	522, 924
BstSCI	CCNGG	3 cut(s)	66, 520, 922
BstSFI	CTRYAG	2 cut(s)	100, 610
BstV1I	GCAGC	9 cut(s)	37, 114, 140, 403, 406, 418, 607, 733, 1066
BstV2I	GAAGAC	1 cut(s)	99
BstX2I	RGATCY	2 cut(s)	70, 244
BstXI	CCANNNNNNTGG	1 cut(s)	222
BstYI	RGATCY	2 cut(s)	70, 244
BsuRI	GGCC	2 cut(s)	663, 948
BtgI	CCRYGG	1 cut(s)	315
BtsCI	GGATG	2 cut(s)	397, 698
BtsIMutI	CAGTG	2 cut(s)	175, 1123
Cac8I	GCNNGC	2 cut(s)	253, 445
CaiI	CAGNNNCTG	1 cut(s)	108
CciI	TCATGA	1 cut(s)	508
CfoI	GCGC	3 cut(s)	55, 399, 900
Cfr13I	GGNCC	3 cut(s)	479, 680, 947
Csp6I	GTAC	1 cut(s)	615
CviAII	CATG	4 cut(s)	316, 403, 488, 509
CviQI	GTAC	1 cut(s)	615
DdeI	CTNAG	6 cut(s)	46, 342, 373, 751, 823, 836
DpnI	GATC	3 cut(s)	72, 246, 466
DpnII	GATC	3 cut(s)	70, 244, 464
EaeI	YGGCCR	1 cut(s)	661
Eam1104I	CTCTTC	1 cut(s)	25
EarI	CTCTTC	1 cut(s)	25
Ecl136II	GAGCTC	1 cut(s)	434
Eco130I	CCWWGG	2 cut(s)	256, 315
Eco24I	GRGCYC	3 cut(s)	120, 436, 931
Eco32I	GATATC	1 cut(s)	634
Eco47I	GGWCC	2 cut(s)	479, 680
Eco47III	AGCGCT	1 cut(s)	899
Eco53kI	GAGCTC	1 cut(s)	434
Eco57I	CTGAAG	1 cut(s)	260
Eco88I	CYCGRG	2 cut(s)	113, 786
EcoICRI	GAGCTC	1 cut(s)	434
EcoNI	CCTNNNNNAGG	1 cut(s)	954
EcoO109I	RGGNCCY	1 cut(s)	479
EcoRII	CCWGG	2 cut(s)	520, 922
EcoRV	GATATC	1 cut(s)	634
EcoT14I	CCWWGG	2 cut(s)	256, 315
EcoT38I	GRGCYC	3 cut(s)	120, 436, 931
ErhI	CCWWGG	2 cut(s)	256, 315
FaeI	CATG	4 cut(s)	319, 406, 491, 512
FaqI	GGGAC	1 cut(s)	976
FatI	CATG	4 cut(s)	315, 402, 487, 508
Fnu4HI	GCNGC	9 cut(s)	51, 103, 154, 407, 417, 420, 621, 747, 1080
FokI	GGATG	2 cut(s)	404, 685
FriOI	GRGCYC	3 cut(s)	120, 436, 931
Fsp4HI	GCNGC	9 cut(s)	51, 103, 154, 407, 417, 420, 621, 747, 1080
FspBI	CTAG	4 cut(s)	426, 476, 951, 998
GlaI	GCGC	3 cut(s)	54, 398, 899
GluI	GCNGC	9 cut(s)	51, 103, 154, 407, 417, 420, 621, 747, 1080
GsaI	CCCAGC	1 cut(s)	140
GsuI	CTGGAG	1 cut(s)	945
HaeII	RGCGCY	1 cut(s)	901
HaeIII	GGCC	2 cut(s)	663, 948
HapII	CCGG	1 cut(s)	68
HhaI	GCGC	3 cut(s)	55, 399, 900
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	4 cut(s)	319, 406, 491, 512
Hin6I	GCGC	3 cut(s)	53, 397, 898
HinP1I	GCGC	3 cut(s)	53, 397, 898
HinfI	GANTC	7 cut(s)	83, 95, 365, 380, 557, 722, 767
HpaII	CCGG	1 cut(s)	68
HphI	GGTGA	2 cut(s)	663, 1055
Hpy166II	GTNNAC	1 cut(s)	683
Hpy188I	TCNGA	5 cut(s)	343, 376, 385, 703, 1057
Hpy188III	TCNNGA	4 cut(s)	77, 300, 509, 777
Hpy8I	GTNNAC	1 cut(s)	683
Hpy99I	CGWCG	2 cut(s)	83, 134
HpyAV	CCTTC	6 cut(s)	66, 130, 235, 444, 492, 988
HpyCH4III	ACNGT	2 cut(s)	179, 1006
HpyCH4IV	ACGT	2 cut(s)	737, 853
HpyCH4V	TGCA	8 cut(s)	102, 156, 406, 612, 866, 884, 1061, 1112
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 108, 403, 440, 752, 789, 872, 881, 1085
HpyF3I	CTNAG	6 cut(s)	46, 342, 373, 751, 823, 836
HpySE526I	ACGT	2 cut(s)	737, 853
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	4 cut(s)	319, 406, 491, 512
HspAI	GCGC	3 cut(s)	53, 397, 898
Kzo9I	GATC	3 cut(s)	70, 244, 464
LmnI	GCTCC	3 cut(s)	19, 832, 926
Lsp1109I	GCAGC	9 cut(s)	37, 114, 140, 403, 406, 418, 607, 733, 1066
LweI	GCATC	4 cut(s)	114, 408, 418, 1048
MaeI	CTAG	4 cut(s)	426, 476, 951, 998
MaeII	ACGT	2 cut(s)	737, 853
MaeIII	GTNAC	2 cut(s)	192, 815
MalI	GATC	3 cut(s)	72, 246, 466
MbiI	CCGCTC	1 cut(s)	1119
MboI	GATC	3 cut(s)	70, 244, 464
MboII	GAAGA	7 cut(s)	12, 15, 65, 104, 164, 303, 1098
MflI	RGATCY	2 cut(s)	70, 244
MhlI	GDGCHC	4 cut(s)	120, 363, 436, 931
MluCI	AATT	4 cut(s)	216, 543, 712, 870
MlyI	GAGTC	4 cut(s)	77, 89, 374, 776
MmeI	TCCRAC	1 cut(s)	111
MseI	TTAA	2 cut(s)	30, 795
MslI	CAYNNNNRTG	1 cut(s)	513
MspA1I	CMGCKG	2 cut(s)	50, 153
MspI	CCGG	1 cut(s)	68
MspR9I	CCNGG	3 cut(s)	68, 522, 924
Mva1269I	GAATGC	2 cut(s)	215, 868
MvaI	CCWGG	2 cut(s)	522, 924
MwoI	GCNNNNNNNGC	9 cut(s)	11, 108, 403, 440, 752, 789, 872, 881, 1085
NciI	CCSGG	1 cut(s)	68
NcoI	CCATGG	1 cut(s)	315
NdeII	GATC	3 cut(s)	70, 244, 464
NlaIII	CATG	4 cut(s)	319, 406, 491, 512
NlaIV	GGNNCC	3 cut(s)	246, 321, 928
NmuCI	GTSAC	1 cut(s)	192
PaeR7I	CTCGAG	2 cut(s)	113, 786
PagI	TCATGA	1 cut(s)	508
PcsI	WCGNNNNNNNCGW	1 cut(s)	87
PctI	GAATGC	2 cut(s)	215, 868
PfeI	GAWTC	3 cut(s)	365, 557, 722
PkrI	GCNGC	9 cut(s)	52, 104, 155, 408, 418, 421, 622, 748, 1081
PleI	GAGTC	4 cut(s)	77, 89, 374, 775
PpsI	GAGTC	4 cut(s)	77, 89, 374, 775
PpuMI	RGGWCCY	1 cut(s)	479
Psp124BI	GAGCTC	1 cut(s)	436
Psp5II	RGGWCCY	1 cut(s)	479
Psp6I	CCWGG	2 cut(s)	520, 922
PspFI	CCCAGC	1 cut(s)	136
PspGI	CCWGG	2 cut(s)	520, 922
PspN4I	GGNNCC	3 cut(s)	246, 321, 928
PspPI	GGNCC	3 cut(s)	479, 680, 947
PspPPI	RGGWCCY	1 cut(s)	479
PspXI	VCTCGAGB	2 cut(s)	113, 786
PstI	CTGCAG	2 cut(s)	104, 614
PstNI	CAGNNNCTG	1 cut(s)	108
PsuI	RGATCY	2 cut(s)	70, 244
PvuII	CAGCTG	2 cut(s)	50, 153
RsaI	GTAC	1 cut(s)	616
RsaNI	GTAC	1 cut(s)	615
RseI	CAYNNNNRTG	1 cut(s)	513
SacI	GAGCTC	1 cut(s)	436
SaqAI	TTAA	2 cut(s)	30, 795
SatI	GCNGC	9 cut(s)	51, 103, 154, 407, 417, 420, 621, 747, 1080
Sau3AI	GATC	3 cut(s)	70, 244, 464
Sau96I	GGNCC	3 cut(s)	479, 680, 947
ScaI	AGTACT	1 cut(s)	616
SchI	GAGTC	4 cut(s)	77, 89, 374, 776
ScrFI	CCNGG	3 cut(s)	68, 522, 924
SduI	GDGCHC	4 cut(s)	120, 363, 436, 931
SfaNI	GCATC	4 cut(s)	114, 408, 418, 1048
SfcI	CTRYAG	2 cut(s)	100, 610
Sfr274I	CTCGAG	2 cut(s)	113, 786
SinI	GGWCC	2 cut(s)	479, 680
SlaI	CTCGAG	2 cut(s)	113, 786
SmiMI	CAYNNNNRTG	1 cut(s)	513
SmlI	CTYRAG	4 cut(s)	113, 292, 775, 786
SmoI	CTYRAG	4 cut(s)	113, 292, 775, 786
Sse9I	AATT	4 cut(s)	216, 543, 712, 870
SsiI	CCGC	2 cut(s)	954, 1119
SspMI	CTAG	4 cut(s)	426, 476, 951, 998
SstI	GAGCTC	1 cut(s)	436
StyD4I	CCNGG	3 cut(s)	66, 520, 922
StyI	CCWWGG	2 cut(s)	256, 315
TaaI	ACNGT	2 cut(s)	179, 1006
TaiI	ACGT	2 cut(s)	740, 856
TaqI	TCGA	4 cut(s)	78, 114, 787, 903
TaqII	GACCGA	1 cut(s)	1107
TasI	AATT	4 cut(s)	216, 543, 712, 870
TatI	WGTACW	1 cut(s)	614
TfiI	GAWTC	3 cut(s)	365, 557, 722
Tru1I	TTAA	2 cut(s)	30, 795
Tru9I	TTAA	2 cut(s)	30, 795
TscAI	CASTG	1 cut(s)	182
TseFI	GTSAC	1 cut(s)	192
TseI	GCWGC	9 cut(s)	50, 102, 153, 406, 416, 419, 620, 746, 1079
Tsp45I	GTSAC	1 cut(s)	192
TspDTI	ATGAA	5 cut(s)	327, 525, 875, 1004, 1062
TspRI	CASTG	1 cut(s)	182
VpaK11BI	GGWCC	2 cut(s)	479, 680
XagI	CCTNNNNNAGG	1 cut(s)	954
XhoI	CTCGAG	2 cut(s)	113, 786
XspI	CTAG	4 cut(s)	426, 476, 951, 998
ZrmI	AGTACT	1 cut(s)	616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.