Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0007659

Physical Location & Seq

Genomic Coordinates Forward (+)

16116000 .. 16125178

Gene Structure 9179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1188800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGATTCAGCGCCAGCTCAGCGTCGCCTTAGAGCAATCAATGGCCACCTCGCCTCCGCCTCCGCCGCCGACTCCGAGTCCCTTCTCCGTCTCAACCCCACCGCCGGCGAGTTTTTTTCCGAGCATGGGTACAGTGTGGTGCTTCCAGAGAAATTAGACACAGGAAAGTGGAATGTATACAGATCTGCACACTCCCCATTGAAGCTTGTTAGTAGATTCCCTGATCATCCTGAAATTGGTACACTGCATGATAATTTTGTGCACTCTGTTGAAACTTTCCGAGATTATAAATATTTGGGCACACGAATTCGCGTTGATGGAACAGTTGGAGATTACAAATGGATGACGTACGGAGAAGCAGGTACTGCTCGGTCAGGAATAGGTTCTGGCCTAATTTATCATGGAATACCAAAGGGATCTTCCATTGGATTGTATTTTATCAATAGACCTGAGTGGCTCATCGTTGATCATGCCTGCTCTGCATATTCGTACATATCAGTTCCTTTATATGACACTCTAGGTCCAGATGCTGTCAAGTACATTGTAAATCATGCTGTTGTACAAGTTATCTTTTGTGTGCCTCAAACATTGAATAGTTTGTTGAGCTTCTTGGCGGATATTCCAACTGTACGCCTGATTGTGGTTGTTGGGGGAGTGGATGATCAAATTCCATCCCTTCCATCATCGACCGGAGTGAAGGTTGTAACATATTCAAAATTGCTATCTCAGGGCTCTAGTAGTATTCAGCCTTTTTGCCCACCAAAACCAGAGGATGTTGCTACAATATGCTACACAAGTGGTACAACTGGCACCCCAAAGGGAGCTGTATTGACTCATGGAAACTTTATTGCAAATGTTGCTGGGTCCACTATTGCTGTCAAATTCTACCCGTCTGACGTCTACATATCATATCTTCCCTTGGCACACATTTATGAACGGGTTAACCAGGTCATGACAGCATATTTTGGAGTTGCTGTTGGATTCTACCAAGGGGATAATCTAAAATTAATGGACGATATGGCAGCACTAAGACCTACCATCTTCTGCAGTGTTCCTAGGCTGTATAACAGAATATATGCGGGTATTACAAATGCGGTAAAGACATCCGGTGCGCTGAGGGAGAGGCTATTTAATGCTGCATACAATGCCAAGAAGCAGGCACTATTAAGTGGAAAAACTGCATCCCCCATGTGGGACAGATTGGTATTCAACAAGATAAAGGCTAAGCTAGGAGGACGAGTTCGTTTTATGGCATCAGGTGCTTCACCCTTGTCTCCTGATGTGATGGAATTTCTAAAGATATGCTTTGGTGGTGAAGTAAATGAAGGGTATGGAATGACTGAGACCTCTTGTGTTATTAGTGCTATGGATGGGGCTGACAACATATCTGGGCACGTCGGCTCTCCTAATCCAGCTTGTGAAATAAAGCTTGTTGATGTACCAGAAATGAACTATACATCTGACGATCAACCCTATCCTCGTGGTGAAATCTGTGTCAGGGGTCCTATTATATTCCAAGGCTATTACAAGGATGAAGTGCAGACGAGGGAAGTGGTTGACGAAGATGGATGGCTTCATACTGGAGACATTGGCTTGTGGTCACCTGGAGGTCGTCTGAAAATTATTGATAGGAAGAAGAACATTTTCAAGTTGGCACAGGGAGAGTATATAGCTCCAGAGAAAATCGAGAATGTCTATGCCAAGTGCAAGTTTGTTGCCCAGTGCTTTGTCCATGGTGACAGCTTTAATTCTTCGTTGGTAGCGATTGTCGCAGTTGACCCGGATGTGTTGAAAGCATGGGCTGATTCTGAAGGCATTAAGTTTGAAGATTTAGGGAAACTGTGCAACGACCCAAGAGCAAGAGCAGCTGTATTGGCTGATATGGATGCTATTGGCAGGGAAGCTCAGTTGAGAGGTTTCGAATTTGTAAAAGCGGTGACACTGGTGCTTGAACAATTCACAATGGAGAATGGACTGCTCACTCCGACGTTTAAGATCAAGAGATCTCAAGCAAAGGATTACTATGCAAACGCTATATCGACCATGTATTCGGAGCTCACTGTTTCCGAATCCGCCCCCTCGAAGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009987 GO:0010035 GO:0010193 GO:0015645 GO:0016020 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0032787 GO:0042221 GO:0042493 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0071704 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

697

Amino Acids

76.18

Weight (kDa)

6.55

Isoelectric Point (pI)

28.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	106 - 509	2.4e-87	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007659)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05970
fragaria_vesca	FvH4_4g15110 FvH4_6g05940
malus_domestica	MD13G1188800.v1.1 MD16G1189300.v1.1
prunus_persica	Prupe.1G155800_v2.0.a1
pyrus_communis	pycom13g16310 pycom16g15930
rosa_chinensis	RchiOBHm_Chr4g0416751
rosa_laevigata	RLG00000007955
rosa_multiflora	Rmu_sc0028652.1_g000009 Rmu_sc0028670.1_g000001 Rmu_sc0028671.1_g000001
rosa_roxburghii	Rroxscaffold_5G00360620
rosa_rugosa	Rorug04G0144200 Rorug04G0144300 Rorug04G0144400 Rorug04G0144400 Rorug04G0144500
rosa_samantha	Rh4AG207100 Rh4BG204300 Rh4CG218100 Rh4DG204200
rosa_wichuraiana	Rw4G017520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	288
AatII	GACGTC	1 cut(s)	900
Acc36I	ACCTGC	1 cut(s)	350
AccB1I	GGYRCC	1 cut(s)	809
AccI	GTMKAC	2 cut(s)	177, 900
AccII	CGCG	1 cut(s)	312
AciI	CCGC	9 cut(s)	57, 63, 66, 102, 614, 1079, 1094, 1934, 2073
AclWI	GGATC	1 cut(s)	424
AcoI	YGGCCR	1 cut(s)	43
AcsI	RAATTY	5 cut(s)	306, 666, 881, 1289, 1922
AcuI	CTGAAG	1 cut(s)	1830
AcyI	GRCGYC	1 cut(s)	897
AfiI	CCNNNNNNNGG	6 cut(s)	104, 126, 236, 640, 1191, 1192
AgsI	TTSAA	9 cut(s)	202, 272, 592, 714, 1210, 1648, 1792, 1826, 1952
AhdI	GACNNNNNGTC	1 cut(s)	76
AjiI	CACGTC	1 cut(s)	1396
AjnI	CCWGG	2 cut(s)	945, 1603
AjuI	GAANNNNNNNTTGG	2 cut(s)	403, 435
AloI	GAACNNNNNNTCC	2 cut(s)	1224, 1256
Alw21I	GWGCWC	2 cut(s)	264, 2058
Alw26I	GTCTC	4 cut(s)	95, 1278, 1337, 1578
Alw44I	GTGCAC	1 cut(s)	260
AlwI	GGATC	1 cut(s)	424
AlwNI	CAGNNNCTG	2 cut(s)	365, 530
AoxI	GGCC	2 cut(s)	43, 388
ApaLI	GTGCAC	1 cut(s)	260
ApeKI	GCWGC	3 cut(s)	1022, 1136, 1865
ApoI	RAATTY	5 cut(s)	306, 666, 881, 1289, 1922
ArsI	GACNNNNNNTTYG	2 cut(s)	2032, 2064
AseI	ATTAAT	1 cut(s)	1007
Asp700I	GAANNNNTTC	2 cut(s)	382, 1643
AspA2I	CCTAGG	1 cut(s)	1055
AspLEI	GCGC	2 cut(s)	13, 1114
AspS9I	GGNCC	3 cut(s)	521, 864, 1502
AsuC2I	CCSGG	1 cut(s)	1781
AsuHPI	GGTGA	6 cut(s)	1257, 1325, 1496, 1593, 1748, 1948
AsuII	TTCGAA	1 cut(s)	1920
AvaII	GGWCC	3 cut(s)	521, 864, 1502
AvrII	CCTAGG	1 cut(s)	1055
BaeGI	GKGCMC	3 cut(s)	264, 302, 1395
BalI	TGGCCA	1 cut(s)	45
BanI	GGYRCC	1 cut(s)	809
BanII	GRGCYC	2 cut(s)	734, 2058
BauI	CACGAG	1 cut(s)	1479
Bbv12I	GWGCWC	2 cut(s)	264, 2058
BbvCI	CCTCAGC	1 cut(s)	1115
BbvI	GCAGC	3 cut(s)	1034, 1123, 1877
BccI	CCATC	8 cut(s)	311, 679, 688, 1046, 1279, 1364, 1559, 1563
BciT130I	CCWGG	2 cut(s)	947, 1605
BclI	TGATCA	3 cut(s)	223, 466, 661
BcnI	CCSGG	1 cut(s)	1781
BcoDI	GTCTC	4 cut(s)	95, 1278, 1337, 1578
BfaI	CTAG	4 cut(s)	518, 735, 1056, 1229
BfmI	CTRYAG	1 cut(s)	1045
BfoI	RGCGCY	1 cut(s)	14
BfuAI	ACCTGC	1 cut(s)	350
BglII	AGATCT	2 cut(s)	182, 2003
BisI	GCNGC	4 cut(s)	66, 1023, 1137, 1866
BlnI	CCTAGG	1 cut(s)	1055
BlpI	GCTNAGC	2 cut(s)	18, 1224
BlsI	GCNGC	4 cut(s)	67, 1024, 1138, 1867
Bme1390I	CCNGG	3 cut(s)	947, 1605, 1781
Bme18I	GGWCC	3 cut(s)	521, 864, 1502
BmeRI	GACNNNNNGTC	1 cut(s)	76
BmgBI	CACGTC	1 cut(s)	1396
BmgT120I	GGNCC	3 cut(s)	521, 864, 1502
BmiI	GGNNCC	3 cut(s)	811, 865, 1503
BmrFI	CCNGG	3 cut(s)	947, 1605, 1781
BmrI	ACTGGG	1 cut(s)	1714
BmsI	GCATC	4 cut(s)	517, 1190, 1262, 1876
BmuI	ACTGGG	1 cut(s)	1714
BpmI	CTGGAG	3 cut(s)	1602, 1626, 1659
Bpu10I	CCTNAGC	1 cut(s)	1115
Bpu1102I	GCTNAGC	2 cut(s)	18, 1224
Bpu14I	TTCGAA	1 cut(s)	1920
BpuEI	CTTGAG	1 cut(s)	1992
BpuMI	CCSGG	1 cut(s)	1781
BsaHI	GRCGYC	1 cut(s)	897
BsaI	GGTCTC	1 cut(s)	1337
BsaJI	CCNNGG	5 cut(s)	918, 988, 1055, 1516, 1732
BsaWI	WCCGGW	2 cut(s)	689, 1106
BsaXI	ACNNNNNCTCC	8 cut(s)	38, 68, 684, 714, 960, 990, 1224, 1254
Bsc4I	CCNNNNNNNGG	6 cut(s)	104, 126, 236, 640, 1191, 1192
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	4 cut(s)	811, 1585, 1720, 1947
BseBI	CCWGG	2 cut(s)	947, 1605
BseDI	CCNNGG	5 cut(s)	918, 988, 1055, 1516, 1732
BseLI	CCNNNNNNNGG	6 cut(s)	104, 126, 236, 640, 1191, 1192
BseMII	CTCAG	6 cut(s)	32, 441, 740, 1106, 1332, 1919
BseNI	ACTGG	4 cut(s)	811, 1585, 1720, 1947
BseSI	GKGCMC	3 cut(s)	264, 302, 1395
BseXI	GCAGC	3 cut(s)	1034, 1123, 1877
BseYI	CCCAGC	1 cut(s)	860
BsgI	GTGCAG	2 cut(s)	171, 1559
Bsh1236I	CGCG	1 cut(s)	312
Bsh1285I	CGRYCG	1 cut(s)	690
BshFI	GGCC	2 cut(s)	45, 390
BshNI	GGYRCC	1 cut(s)	809
BsiEI	CGRYCG	1 cut(s)	690
BsiHKAI	GWGCWC	2 cut(s)	264, 2058
BsiSI	CCGG	4 cut(s)	105, 690, 1107, 1781
BsiWI	CGTACG	1 cut(s)	348
BslFI	GGGAC	2 cut(s)	64, 1208
BslI	CCNNNNNNNGG	6 cut(s)	104, 126, 236, 640, 1191, 1192
BsmAI	GTCTC	4 cut(s)	95, 1278, 1337, 1578
BsmBI	CGTCTC	1 cut(s)	95
BsmFI	GGGAC	2 cut(s)	64, 1208
BsnI	GGCC	2 cut(s)	45, 390
Bso31I	GGTCTC	1 cut(s)	1337
Bsp119I	TTCGAA	1 cut(s)	1920
Bsp1286I	GDGCHC	5 cut(s)	264, 302, 734, 1395, 2058
Bsp1407I	TGTACA	1 cut(s)	559
Bsp143I	GATC	8 cut(s)	182, 223, 416, 466, 661, 1465, 1995, 2003
Bsp1720I	GCTNAGC	2 cut(s)	18, 1224
Bsp19I	CCATGG	1 cut(s)	1732
BspACI	CCGC	9 cut(s)	57, 63, 66, 102, 614, 1079, 1094, 1934, 2073
BspANI	GGCC	2 cut(s)	45, 390
BspCNI	CTCAG	6 cut(s)	31, 442, 739, 1107, 1333, 1918
BspFNI	CGCG	1 cut(s)	312
BspHI	TCATGA	1 cut(s)	951
BspLI	GGNNCC	3 cut(s)	811, 865, 1503
BspMAI	CTGCAG	1 cut(s)	1049
BspMI	ACCTGC	1 cut(s)	350
BspPI	GGATC	1 cut(s)	424
BspT104I	TTCGAA	1 cut(s)	1920
BspT107I	GGYRCC	1 cut(s)	809
BspTNI	GGTCTC	1 cut(s)	1337
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	1 cut(s)	559
BsrI	ACTGG	4 cut(s)	811, 1585, 1720, 1947
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	5 cut(s)	918, 988, 1055, 1516, 1732
BssMI	GATC	8 cut(s)	182, 223, 416, 466, 661, 1465, 1995, 2003
BssNAI	GTATAC	1 cut(s)	178
BssNI	GRCGYC	1 cut(s)	897
BssSI	CACGAG	1 cut(s)	1479
BssT1I	CCWWGG	5 cut(s)	918, 988, 1055, 1516, 1732
Bst1107I	GTATAC	1 cut(s)	178
Bst2BI	CACGAG	1 cut(s)	1479
Bst2UI	CCWGG	2 cut(s)	947, 1605
Bst4CI	ACNGT	5 cut(s)	134, 325, 628, 1842, 2062
BstACI	GRCGYC	1 cut(s)	897
BstAPI	GCANNNNNTGC	4 cut(s)	365, 857, 1145, 1259
BstAUI	TGTACA	1 cut(s)	559
BstBI	TTCGAA	1 cut(s)	1920
BstC8I	GCNNGC	4 cut(s)	15, 106, 475, 1158
BstDEI	CTNAG	9 cut(s)	18, 29, 450, 726, 1028, 1115, 1224, 1341, 1905
BstDSI	CCRYGG	1 cut(s)	1732
BstEII	GGTNACC	1 cut(s)	1599
BstFNI	CGCG	1 cut(s)	312
BstH2I	RGCGCY	1 cut(s)	14
BstHHI	GCGC	2 cut(s)	13, 1114
BstKTI	GATC	8 cut(s)	185, 226, 419, 469, 664, 1468, 1998, 2006
BstMAI	GTCTC	4 cut(s)	95, 1278, 1337, 1578
BstMBI	GATC	8 cut(s)	182, 223, 416, 466, 661, 1465, 1995, 2003
BstMCI	CGRYCG	1 cut(s)	690
BstNI	CCWGG	2 cut(s)	947, 1605
BstPI	GGTNACC	1 cut(s)	1599
BstSCI	CCNGG	3 cut(s)	945, 1603, 1779
BstSFI	CTRYAG	1 cut(s)	1045
BstSLI	GKGCMC	3 cut(s)	264, 302, 1395
BstUI	CGCG	1 cut(s)	312
BstV1I	GCAGC	3 cut(s)	1034, 1123, 1877
BstX2I	RGATCY	3 cut(s)	182, 416, 2003
BstYI	RGATCY	3 cut(s)	182, 416, 2003
BstZ17I	GTATAC	1 cut(s)	178
BsuRI	GGCC	2 cut(s)	45, 390
BtgI	CCRYGG	1 cut(s)	1732
BtrI	CACGTC	1 cut(s)	1396
BtsI	GCAGTG	2 cut(s)	242, 1054
BtsIMutI	CAGTG	6 cut(s)	139, 242, 1054, 1727, 1940, 2058
BveI	ACCTGC	1 cut(s)	350
Cac8I	GCNNGC	4 cut(s)	15, 106, 475, 1158
CaiI	CAGNNNCTG	2 cut(s)	365, 530
CciI	TCATGA	1 cut(s)	951
CfoI	GCGC	2 cut(s)	13, 1114
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	3 cut(s)	521, 864, 1502
CseI	GACGC	1 cut(s)	11
CsiI	ACCWGGT	1 cut(s)	945
DdeI	CTNAG	9 cut(s)	18, 29, 450, 726, 1028, 1115, 1224, 1341, 1905
DpnI	GATC	8 cut(s)	184, 225, 418, 468, 663, 1467, 1997, 2005
DpnII	GATC	8 cut(s)	182, 223, 416, 466, 661, 1465, 1995, 2003
DriI	GACNNNNNGTC	1 cut(s)	76
EaeI	YGGCCR	1 cut(s)	43
Eam1105I	GACNNNNNGTC	1 cut(s)	76
EciI	GGCGGA	4 cut(s)	46, 52, 629, 2062
Ecl136II	GAGCTC	1 cut(s)	2056
Eco130I	CCWWGG	5 cut(s)	918, 988, 1055, 1516, 1732
Eco24I	GRGCYC	2 cut(s)	734, 2058
Eco31I	GGTCTC	1 cut(s)	1337
Eco47I	GGWCC	3 cut(s)	521, 864, 1502
Eco53kI	GAGCTC	1 cut(s)	2056
Eco57I	CTGAAG	1 cut(s)	1830
Eco91I	GGTNACC	1 cut(s)	1599
EcoICRI	GAGCTC	1 cut(s)	2056
EcoO109I	RGGNCCY	1 cut(s)	1502
EcoO65I	GGTNACC	1 cut(s)	1599
EcoRI	GAATTC	1 cut(s)	306
EcoRII	CCWGG	2 cut(s)	945, 1603
EcoT14I	CCWWGG	5 cut(s)	918, 988, 1055, 1516, 1732
EcoT38I	GRGCYC	2 cut(s)	734, 2058
ErhI	CCWWGG	5 cut(s)	918, 988, 1055, 1516, 1732
Esp3I	CGTCTC	1 cut(s)	95
FalI	AAGNNNNNCTT	2 cut(s)	1289, 1321
FaqI	GGGAC	2 cut(s)	64, 1208
FauI	CCCGC	1 cut(s)	1072
FbaI	TGATCA	3 cut(s)	223, 466, 661
FblI	GTMKAC	2 cut(s)	177, 900
Fnu4HI	GCNGC	4 cut(s)	66, 1023, 1137, 1866
FriOI	GRGCYC	2 cut(s)	734, 2058
Fsp4HI	GCNGC	4 cut(s)	66, 1023, 1137, 1866
FspBI	CTAG	4 cut(s)	518, 735, 1056, 1229
GlaI	GCGC	2 cut(s)	12, 1113
GluI	GCNGC	4 cut(s)	66, 1023, 1137, 1866
GsaI	CCCAGC	1 cut(s)	864
GsuI	CTGGAG	3 cut(s)	1602, 1626, 1659
HaeII	RGCGCY	1 cut(s)	14
HaeIII	GGCC	2 cut(s)	45, 390
HapII	CCGG	4 cut(s)	105, 690, 1107, 1781
HgaI	GACGC	1 cut(s)	11
HhaI	GCGC	2 cut(s)	13, 1114
Hin1I	GRCGYC	1 cut(s)	897
Hin6I	GCGC	2 cut(s)	11, 1112
HinP1I	GCGC	2 cut(s)	11, 1112
HincII	GTYRAC	3 cut(s)	943, 1558, 1777
HindII	GTYRAC	3 cut(s)	943, 1558, 1777
HindIII	AAGCTT	3 cut(s)	203, 1427, 2084
HinfI	GANTC	8 cut(s)	5, 71, 77, 216, 832, 981, 1805, 2069
HpaI	GTTAAC	1 cut(s)	943
HpaII	CCGG	4 cut(s)	105, 690, 1107, 1781
HphI	GGTGA	6 cut(s)	1257, 1325, 1496, 1593, 1748, 1948
Hpy166II	GTNNAC	8 cut(s)	178, 242, 262, 867, 901, 943, 1558, 1777
Hpy188III	TCNNGA	9 cut(s)	146, 230, 375, 524, 952, 1277, 1676, 1687, 1999
Hpy8I	GTNNAC	8 cut(s)	178, 242, 262, 867, 901, 943, 1558, 1777
Hpy99I	CGWCG	3 cut(s)	27, 1400, 1990
HpyAV	CCTTC	5 cut(s)	92, 686, 691, 1319, 1805
HpyCH4III	ACNGT	5 cut(s)	134, 325, 628, 1842, 2062
HpyCH4IV	ACGT	4 cut(s)	347, 897, 1395, 1988
HpyF3I	CTNAG	9 cut(s)	18, 29, 450, 726, 1028, 1115, 1224, 1341, 1905
HpySE526I	ACGT	4 cut(s)	347, 897, 1395, 1988
Hsp92I	GRCGYC	1 cut(s)	897
HspAI	GCGC	2 cut(s)	11, 1112
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Ksp22I	TGATCA	3 cut(s)	223, 466, 661
KspAI	GTTAAC	1 cut(s)	943
Kzo9I	GATC	8 cut(s)	182, 223, 416, 466, 661, 1465, 1995, 2003
LmnI	GCTCC	3 cut(s)	821, 1678, 2053
Lsp1109I	GCAGC	3 cut(s)	1034, 1123, 1877
LweI	GCATC	4 cut(s)	517, 1190, 1262, 1876
MabI	ACCWGGT	1 cut(s)	945
MaeI	CTAG	4 cut(s)	518, 735, 1056, 1229
MaeII	ACGT	4 cut(s)	347, 897, 1395, 1988
MaeIII	GTNAC	4 cut(s)	703, 1599, 1736, 1936
MalI	GATC	8 cut(s)	184, 225, 418, 468, 663, 1467, 1997, 2005
MboI	GATC	8 cut(s)	182, 223, 416, 466, 661, 1465, 1995, 2003
MboII	GAAGA	8 cut(s)	411, 905, 1033, 1574, 1645, 1648, 1743, 1838
MflI	RGATCY	3 cut(s)	182, 416, 2003
MhlI	GDGCHC	5 cut(s)	264, 302, 734, 1395, 2058
MlsI	TGGCCA	1 cut(s)	45
MluNI	TGGCCA	1 cut(s)	45
MlyI	GAGTC	3 cut(s)	65, 86, 826
MmeI	TCCRAC	4 cut(s)	307, 647, 958, 2009
Mox20I	TGGCCA	1 cut(s)	45
MreI	CGCCGGCG	1 cut(s)	104
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	2 cut(s)	382, 1643
MscI	TGGCCA	1 cut(s)	45
MseI	TTAA	8 cut(s)	942, 1007, 1131, 1166, 1746, 1818, 1992, 2089
MslI	CAYNNNNRTG	1 cut(s)	930
Msp20I	TGGCCA	1 cut(s)	45
MspA1I	CMGCKG	1 cut(s)	1868
MspI	CCGG	4 cut(s)	105, 690, 1107, 1781
MspR9I	CCNGG	3 cut(s)	947, 1605, 1781
MvaI	CCWGG	2 cut(s)	947, 1605
MvnI	CGCG	1 cut(s)	312
NaeI	GCCGGC	1 cut(s)	106
NciI	CCSGG	1 cut(s)	1781
NcoI	CCATGG	1 cut(s)	1732
NdeII	GATC	8 cut(s)	182, 223, 416, 466, 661, 1465, 1995, 2003
NgoMIV	GCCGGC	1 cut(s)	104
NlaIV	GGNNCC	3 cut(s)	811, 865, 1503
NmuCI	GTSAC	3 cut(s)	1599, 1736, 1936
NspV	TTCGAA	1 cut(s)	1920
PagI	TCATGA	1 cut(s)	951
PcsI	WCGNNNNNNNCGW	1 cut(s)	1760
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	2 cut(s)	382, 1643
PfeI	GAWTC	5 cut(s)	5, 216, 981, 1805, 2069
Pfl23II	CGTACG	1 cut(s)	348
PkrI	GCNGC	4 cut(s)	67, 1024, 1138, 1867
PleI	GAGTC	3 cut(s)	65, 85, 826
PpsI	GAGTC	3 cut(s)	65, 85, 826
PpuMI	RGGWCCY	1 cut(s)	1502
PshBI	ATTAAT	1 cut(s)	1007
PsiI	TTATAA	1 cut(s)	288
Psp124BI	GAGCTC	1 cut(s)	2058
Psp5II	RGGWCCY	1 cut(s)	1502
Psp6I	CCWGG	2 cut(s)	945, 1603
PspEI	GGTNACC	1 cut(s)	1599
PspFI	CCCAGC	1 cut(s)	860
PspGI	CCWGG	2 cut(s)	945, 1603
PspLI	CGTACG	1 cut(s)	348
PspN4I	GGNNCC	3 cut(s)	811, 865, 1503
PspPI	GGNCC	3 cut(s)	521, 864, 1502
PspPPI	RGGWCCY	1 cut(s)	1502
PstI	CTGCAG	1 cut(s)	1049
PstNI	CAGNNNCTG	2 cut(s)	365, 530
PsuI	RGATCY	3 cut(s)	182, 416, 2003
PvuII	CAGCTG	1 cut(s)	1868
RseI	CAYNNNNRTG	1 cut(s)	930
SacI	GAGCTC	1 cut(s)	2058
SaqAI	TTAA	8 cut(s)	942, 1007, 1131, 1166, 1746, 1818, 1992, 2089
SatI	GCNGC	4 cut(s)	66, 1023, 1137, 1866
Sau3AI	GATC	8 cut(s)	182, 223, 416, 466, 661, 1465, 1995, 2003
Sau96I	GGNCC	3 cut(s)	521, 864, 1502
SchI	GAGTC	3 cut(s)	65, 86, 826
ScrFI	CCNGG	3 cut(s)	947, 1605, 1781
SduI	GDGCHC	5 cut(s)	264, 302, 734, 1395, 2058
SexAI	ACCWGGT	1 cut(s)	945
SfaNI	GCATC	4 cut(s)	517, 1190, 1262, 1876
SfcI	CTRYAG	1 cut(s)	1045
SfuI	TTCGAA	1 cut(s)	1920
SgrAI	CRCCGGYG	1 cut(s)	104
SinI	GGWCC	3 cut(s)	521, 864, 1502
SmiMI	CAYNNNNRTG	1 cut(s)	930
SmlI	CTYRAG	1 cut(s)	2007
SmoI	CTYRAG	1 cut(s)	2007
SsiI	CCGC	9 cut(s)	57, 63, 66, 102, 614, 1079, 1094, 1934, 2073
SspI	AATATT	1 cut(s)	293
SspMI	CTAG	4 cut(s)	518, 735, 1056, 1229
SstI	GAGCTC	1 cut(s)	2058
StyD4I	CCNGG	3 cut(s)	945, 1603, 1779
StyI	CCWWGG	5 cut(s)	918, 988, 1055, 1516, 1732
TaaI	ACNGT	5 cut(s)	134, 325, 628, 1842, 2062
TaiI	ACGT	4 cut(s)	350, 900, 1398, 1991
TaqI	TCGA	5 cut(s)	686, 1686, 1920, 2039, 2081
TaqII	GACCGA	1 cut(s)	360
TatI	WGTACW	2 cut(s)	537, 559
TauI	GCSGC	1 cut(s)	68
TfiI	GAWTC	5 cut(s)	5, 216, 981, 1805, 2069
Tru1I	TTAA	8 cut(s)	942, 1007, 1131, 1166, 1746, 1818, 1992, 2089
Tru9I	TTAA	8 cut(s)	942, 1007, 1131, 1166, 1746, 1818, 1992, 2089
TscAI	CASTG	6 cut(s)	139, 249, 1054, 1727, 1947, 2065
TseFI	GTSAC	3 cut(s)	1599, 1736, 1936
TseI	GCWGC	3 cut(s)	1022, 1136, 1865
Tsp45I	GTSAC	3 cut(s)	1599, 1736, 1936
TspDTI	ATGAA	5 cut(s)	948, 1338, 1463, 1548, 1565
TspGWI	ACGGA	2 cut(s)	77, 366
TspRI	CASTG	6 cut(s)	139, 249, 1054, 1727, 1947, 2065
VneI	GTGCAC	1 cut(s)	260
VpaK11BI	GGWCC	3 cut(s)	521, 864, 1502
VspI	ATTAAT	1 cut(s)	1007
XapI	RAATTY	5 cut(s)	306, 666, 881, 1289, 1922
XmaJI	CCTAGG	1 cut(s)	1055
XmiI	GTMKAC	2 cut(s)	177, 900
XmnI	GAANNNNTTC	2 cut(s)	382, 1643
XspI	CTAG	4 cut(s)	518, 735, 1056, 1229
ZraI	GACGTC	1 cut(s)	898

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.