Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0007659

Physical Location & Seq

Genomic Coordinates Reverse (-)

39439241 .. 39450317

Gene Structure 11077 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G017520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGGATTCCACTCCAGCTCAGCGTCGCCTCGAAGCCATTAACGGCCACCTCATCTCCGACGCCGACTCCCTCTCCATTCTCCGCCCCAACGCCACCGCCGGCGAGTTCGTTTCCGAGCAAGGGTACAGTGTGGTGCTTCCAGAGAAACTAGATACAGGAAAATGGAATGTATACAGATCTGCGCGTTCTCCTTTGAAGCTTGTTAGTAGATTCCCTGATCATCCCGAAATTGCTACGCTTCATGATAATTTTGTGCACTCAGTTGATACGTTCAGAGATTACAAATATTTGGGAACAAGAATTCGGGTCGATGGAACAGTTGGAGAATACAAATGGATGACGTTTGGAGAAGCAGATACTGCTCGGTCAGCAATAGGTTCTGGCCTCATATATCATGGGATACCAAAGGGATCTTGCATTGGGTTGTATTTTATAAACAGACCGGAGTGGATGATTGTTGATCATGCCTGCTCTGCATATTCTTACATATCAGTTCCTTTGTATGACACACTAGGTCCAGATGCTGTCAAATACATTGCAAATCATGCTGTTGTACAAGTTATATTTTGCGTTCCCGAAACATTGAATAGTATATTGAGCTTTCTCTCAGATATTCCAACTGTACGCCTCATTGTGGTTGTTGGAGGCATAGATGAACAAATACCATCCCTTCCGCCTTCAACGGGAGTGAAGGTTGTAACATATTCAACATTGCTCAATCAGGGCCGTAGTAGCATGCAGCCTTTCTGCCCACCAAAGTCGGATGATATTGCAACAATTTGCTACACAAGTGGCACCACTGGCACTCCAAAGGGAGCTGTATTGTCTCATGGAAACTTGATTGCAAGTGTTGCTGGGGCCACTTTTGGTATCCAGTTCTACCCCTCTGATGTTTACATATCATATCTTCCTTTGGCACACATATATGAGCGGGCTAACCAGGTCATGACGGTACATTTTGGAGTTGCTGTTGGATTCTACCAAGGGGATAATATGAAATTGATGGATGATATGGCTGCTCTAAGACCTACTATCTTCTGCAGTGTCCCTAGGCTGTATAACAGAATATATGCTGGAATCACGAATGCTGTAAAGACATCAGGTGTGCTGAGGGAGAGGCTATTTAATGCTGCTTACAATGCCAAGAAGAAGGCATTATTAAGTGGAAAAAATCCATCTCCCATGTGGGACAGGTTGGTGTTTAATAAGATAAAGGCTAAGCTAGGAGGACGTGTTCGTTTTATGGCATCAGGTGCTTCACCCTTGTCTCCTGATGTTATGGACTTTTTAAAAATATGCTTTGGGGGTGACGTAAATGAAGGGTATGGAATGACCGAGACTTCCTGTGTTATTAGTACTATGGACAGCGGTGACAACATATCTGGCCATGTTGGCTCTCCTAGTCCAGCTTGCGAAATCAAGCTGGTTGATGTACCAGAAATGAACTACACGTGTGATGATCAACCCTATCCACGCGGTGAAATCTGTGTCAGGGGTCCTATTATTTTTCTGGGCTATCACAAAGATGAAGTGCAGACGAGAGAAGTCATTGATGAAGATGGGTGGCTTCATACTGGAGACATTGGGTCATGGTTACCTGGTGGTCGTCTGAAAATTATTGATAGGAAGAAGAACATTTTCAAGTTGGCACAGGGAGAGTATATAGCTCCAGAAAAAATTGAGAATGTTTATGCCAAGTGCAAGCTTGTTGCCCAGTGCTTTGTACATGGGGACAGCCTAAATTCTTCTTTGGTAGCAATTGTCTCAGTTGACCCAGATATGTTGAAAGCATGGGCTGATTCTGAAGGCATAAAGTATGAAGATTTAGGGCGACTGTGTAATGATCCAAGAGCAAGGGCTGCTGTATTGGCTGATATGGATGCTATTGGCAGGGAAGCTCAGTTGAGAGGTTTTGAATTTGTAAAAGCCGTGACGCTGACGGTTGAACCGTTCACACTGGAGAATGGTCTACTCACTCCAACATTTAAGATCAAGAGACCTCAAGCAAAGGAATACTTTGCAAAAGCAATATCCAATATGTATTCGGAGCTTGCTACTTCTGATCCTGCCCCTTCAAAACTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009987 GO:0010035 GO:0010193 GO:0015645 GO:0016020 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0032787 GO:0042221 GO:0042493 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0071704 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

694

Amino Acids

76.17

Weight (kDa)

6.3

Isoelectric Point (pI)

30.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	108 - 507	3.5e-85	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007659)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05970
fragaria_vesca	FvH4_4g15110 FvH4_6g05940
malus_domestica	MD13G1188800.v1.1 MD16G1189300.v1.1
prunus_persica	Prupe.1G155800_v2.0.a1
pyrus_communis	pycom13g16310 pycom16g15930
rosa_chinensis	RchiOBHm_Chr4g0416751
rosa_laevigata	RLG00000007955
rosa_multiflora	Rmu_sc0028652.1_g000009 Rmu_sc0028670.1_g000001 Rmu_sc0028671.1_g000001
rosa_roxburghii	Rroxscaffold_5G00360620
rosa_rugosa	Rorug04G0144200 Rorug04G0144300 Rorug04G0144400 Rorug04G0144400 Rorug04G0144500
rosa_samantha	Rh4AG207100 Rh4BG204300 Rh4CG218100 Rh4DG204200
rosa_wichuraiana	Rw4G017520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	434
AccB1I	GGYRCC	1 cut(s)	794
AccBSI	CCGCTC	1 cut(s)	931
AccI	GTMKAC	2 cut(s)	171, 1969
AccII	CGCG	2 cut(s)	184, 1476
AciI	CCGC	6 cut(s)	82, 96, 674, 931, 1368, 1476
AclWI	GGATC	3 cut(s)	418, 1838, 2057
AcoI	YGGCCR	2 cut(s)	43, 1384
AcsI	RAATTY	3 cut(s)	300, 1741, 1916
AcuI	CTGAAG	1 cut(s)	1824
AcvI	CACGTG	1 cut(s)	1452
AcyI	GRCGYC	1 cut(s)	60
AdeI	CACNNNGTG	1 cut(s)	1478
AfaI	GTAC	7 cut(s)	125, 555, 624, 954, 1357, 1434, 1725
AfiI	CCNNNNNNNGG	3 cut(s)	120, 634, 683
AflIII	ACRYGT	3 cut(s)	1231, 1449, 1451
AgsI	TTSAA	9 cut(s)	196, 586, 681, 708, 1642, 1786, 1916, 1946, 2076
AhdI	GACNNNNNGTC	1 cut(s)	1585
AjiI	CACGTC	1 cut(s)	1232
AjnI	CCWGG	2 cut(s)	939, 1597
AloI	GAACNNNNNNTCC	2 cut(s)	1218, 1250
Alw21I	GWGCWC	1 cut(s)	258
Alw26I	GTCTC	6 cut(s)	831, 1272, 1331, 1572, 1768, 1990
Alw44I	GTGCAC	1 cut(s)	254
AlwI	GGATC	3 cut(s)	418, 1838, 2057
AlwNI	CAGNNNCTG	2 cut(s)	359, 524
AoxI	GGCC	5 cut(s)	43, 382, 724, 858, 1384
ApaLI	GTGCAC	1 cut(s)	254
ApeKI	GCWGC	4 cut(s)	739, 1016, 1130, 1859
ApoI	RAATTY	3 cut(s)	300, 1741, 1916
Asp700I	GAANNNNTTC	1 cut(s)	1637
AspA2I	CCTAGG	1 cut(s)	1049
AspLEI	GCGC	1 cut(s)	184
AspS9I	GGNCC	4 cut(s)	515, 724, 858, 1496
AsuHPI	GGTGA	4 cut(s)	1251, 1319, 1382, 1490
AvaII	GGWCC	2 cut(s)	515, 1496
AvrII	CCTAGG	1 cut(s)	1049
BaeGI	GKGCMC	1 cut(s)	258
BalI	TGGCCA	1 cut(s)	1386
BanI	GGYRCC	1 cut(s)	794
BbrPI	CACGTG	1 cut(s)	1452
Bbv12I	GWGCWC	1 cut(s)	258
BbvCI	CCTCAGC	1 cut(s)	1109
BbvI	GCAGC	4 cut(s)	751, 1003, 1117, 1846
BccI	CCATC	5 cut(s)	305, 673, 997, 1183, 1553
BceAI	ACGGC	3 cut(s)	58, 711, 1913
BciT130I	CCWGG	2 cut(s)	941, 1599
BciVI	GTATCC	2 cut(s)	393, 881
BclI	TGATCA	3 cut(s)	217, 460, 1459
BcoDI	GTCTC	6 cut(s)	831, 1272, 1331, 1572, 1768, 1990
BfaI	CTAG	5 cut(s)	149, 512, 1050, 1223, 1401
BfmI	CTRYAG	1 cut(s)	1039
BfuI	GTATCC	2 cut(s)	393, 881
BglI	GCCNNNNNGGC	1 cut(s)	1392
BglII	AGATCT	1 cut(s)	176
BisI	GCNGC	4 cut(s)	740, 1017, 1131, 1860
BlnI	CCTAGG	1 cut(s)	1049
BlpI	GCTNAGC	2 cut(s)	18, 1218
BlsI	GCNGC	4 cut(s)	741, 1018, 1132, 1861
BmcAI	AGTACT	1 cut(s)	1357
Bme1390I	CCNGG	2 cut(s)	941, 1599
Bme18I	GGWCC	2 cut(s)	515, 1496
BmeRI	GACNNNNNGTC	1 cut(s)	1585
BmgBI	CACGTC	1 cut(s)	1232
BmgT120I	GGNCC	4 cut(s)	515, 724, 858, 1496
BmiI	GGNNCC	3 cut(s)	796, 859, 1497
BmrFI	CCNGG	2 cut(s)	941, 1599
BmrI	ACTGGG	1 cut(s)	1708
BmsI	GCATC	3 cut(s)	511, 1256, 1870
BmuI	ACTGGG	1 cut(s)	1708
BpmI	CTGGAG	3 cut(s)	1596, 1653, 1979
Bpu10I	CCTNAGC	1 cut(s)	1109
Bpu1102I	GCTNAGC	2 cut(s)	18, 1218
BpuEI	CTTGAG	1 cut(s)	1986
BsaAI	YACGTR	1 cut(s)	1452
BsaHI	GRCGYC	1 cut(s)	60
BsaI	GGTCTC	1 cut(s)	1990
BsaJI	CCNNGG	2 cut(s)	982, 1049
BsaWI	WCCGGW	1 cut(s)	442
Bsc4I	CCNNNNNNNGG	3 cut(s)	120, 634, 683
Bse118I	RCCGGY	1 cut(s)	98
Bse1I	ACTGG	5 cut(s)	805, 874, 1579, 1714, 1962
Bse3DI	GCAATG	2 cut(s)	534, 710
BseBI	CCWGG	2 cut(s)	941, 1599
BseDI	CCNNGG	2 cut(s)	982, 1049
BseGI	GGATG	7 cut(s)	220, 342, 456, 665, 769, 1012, 1885
BseLI	CCNNNNNNNGG	3 cut(s)	120, 634, 683
BseMI	GCAATG	2 cut(s)	534, 710
BseMII	CTCAG	6 cut(s)	32, 273, 621, 1100, 1779, 1913
BseNI	ACTGG	5 cut(s)	805, 874, 1579, 1714, 1962
BseSI	GKGCMC	1 cut(s)	258
BseXI	GCAGC	4 cut(s)	751, 1003, 1117, 1846
BseYI	CCCAGC	1 cut(s)	854
BsgI	GTGCAG	1 cut(s)	1553
Bsh1236I	CGCG	2 cut(s)	184, 1476
BshFI	GGCC	5 cut(s)	45, 384, 726, 860, 1386
BshNI	GGYRCC	1 cut(s)	794
BsiHKAI	GWGCWC	1 cut(s)	258
BsiSI	CCGG	2 cut(s)	99, 443
BslFI	GGGAC	3 cut(s)	1031, 1202, 1745
BslI	CCNNNNNNNGG	3 cut(s)	120, 634, 683
BsmAI	GTCTC	6 cut(s)	831, 1272, 1331, 1572, 1768, 1990
BsmFI	GGGAC	3 cut(s)	1031, 1202, 1745
BsmI	GAATGC	1 cut(s)	1090
BsnI	GGCC	5 cut(s)	45, 384, 726, 860, 1386
Bso31I	GGTCTC	1 cut(s)	1990
Bsp1286I	GDGCHC	1 cut(s)	258
Bsp1407I	TGTACA	2 cut(s)	553, 1723
Bsp143I	GATC	8 cut(s)	176, 217, 410, 460, 1459, 1843, 1989, 2062
Bsp1720I	GCTNAGC	2 cut(s)	18, 1218
BspACI	CCGC	6 cut(s)	82, 96, 674, 931, 1368, 1476
BspANI	GGCC	5 cut(s)	45, 384, 726, 860, 1386
BspCNI	CTCAG	6 cut(s)	31, 272, 620, 1101, 1778, 1912
BspFNI	CGCG	2 cut(s)	184, 1476
BspHI	TCATGA	2 cut(s)	241, 945
BspLI	GGNNCC	3 cut(s)	796, 859, 1497
BspMAI	CTGCAG	1 cut(s)	1043
BspPI	GGATC	3 cut(s)	418, 1838, 2057
BspT107I	GGYRCC	1 cut(s)	794
BspTNI	GGTCTC	1 cut(s)	1990
BsrBI	CCGCTC	1 cut(s)	931
BsrDI	GCAATG	2 cut(s)	534, 710
BsrFI	RCCGGY	1 cut(s)	98
BsrGI	TGTACA	2 cut(s)	553, 1723
BsrI	ACTGG	5 cut(s)	805, 874, 1579, 1714, 1962
BssAI	RCCGGY	1 cut(s)	98
BssECI	CCNNGG	2 cut(s)	982, 1049
BssMI	GATC	8 cut(s)	176, 217, 410, 460, 1459, 1843, 1989, 2062
BssNAI	GTATAC	1 cut(s)	172
BssNI	GRCGYC	1 cut(s)	60
BssT1I	CCWWGG	2 cut(s)	982, 1049
Bst1107I	GTATAC	1 cut(s)	172
Bst2UI	CCWGG	2 cut(s)	941, 1599
Bst4CI	ACNGT	7 cut(s)	128, 319, 622, 952, 1836, 1942, 1950
BstACI	GRCGYC	1 cut(s)	60
BstAPI	GCANNNNNTGC	5 cut(s)	359, 545, 851, 1253, 1859
BstAUI	TGTACA	2 cut(s)	553, 1723
BstBAI	YACGTR	1 cut(s)	1452
BstC8I	GCNNGC	7 cut(s)	100, 469, 737, 933, 1411, 1703, 2052
BstDEI	CTNAG	8 cut(s)	18, 259, 607, 1022, 1109, 1218, 1765, 1899
BstEII	GGTNACC	1 cut(s)	1593
BstF5I	GGATG	7 cut(s)	220, 342, 456, 665, 769, 1012, 1885
BstFNI	CGCG	2 cut(s)	184, 1476
BstHHI	GCGC	1 cut(s)	184
BstKTI	GATC	8 cut(s)	179, 220, 413, 463, 1462, 1846, 1992, 2065
BstMAI	GTCTC	6 cut(s)	831, 1272, 1331, 1572, 1768, 1990
BstMBI	GATC	8 cut(s)	176, 217, 410, 460, 1459, 1843, 1989, 2062
BstNI	CCWGG	2 cut(s)	941, 1599
BstNSI	RCATGY	1 cut(s)	739
BstPI	GGTNACC	1 cut(s)	1593
BstSCI	CCNGG	2 cut(s)	939, 1597
BstSFI	CTRYAG	1 cut(s)	1039
BstSLI	GKGCMC	1 cut(s)	258
BstUI	CGCG	2 cut(s)	184, 1476
BstV1I	GCAGC	4 cut(s)	751, 1003, 1117, 1846
BstX2I	RGATCY	2 cut(s)	176, 410
BstYI	RGATCY	2 cut(s)	176, 410
BstZ17I	GTATAC	1 cut(s)	172
BsuI	GTATCC	2 cut(s)	393, 881
BsuRI	GGCC	5 cut(s)	45, 384, 726, 860, 1386
BtrI	CACGTC	1 cut(s)	1232
BtsCI	GGATG	7 cut(s)	220, 342, 456, 665, 769, 1012, 1885
BtsI	GCAGTG	1 cut(s)	1048
BtsIMutI	CAGTG	5 cut(s)	133, 798, 1048, 1721, 1955
Cac8I	GCNNGC	7 cut(s)	100, 469, 737, 933, 1411, 1703, 2052
CaiI	CAGNNNCTG	2 cut(s)	359, 524
CciI	TCATGA	2 cut(s)	241, 945
CfoI	GCGC	1 cut(s)	184
Cfr10I	RCCGGY	1 cut(s)	98
Cfr13I	GGNCC	4 cut(s)	515, 724, 858, 1496
CseI	GACGC	3 cut(s)	11, 68, 1942
CsiI	ACCWGGT	2 cut(s)	939, 1597
Csp6I	GTAC	7 cut(s)	124, 554, 623, 953, 1356, 1433, 1724
CviQI	GTAC	7 cut(s)	124, 554, 623, 953, 1356, 1433, 1724
DdeI	CTNAG	8 cut(s)	18, 259, 607, 1022, 1109, 1218, 1765, 1899
DpnI	GATC	8 cut(s)	178, 219, 412, 462, 1461, 1845, 1991, 2064
DpnII	GATC	8 cut(s)	176, 217, 410, 460, 1459, 1843, 1989, 2062
DraI	TTTAAA	1 cut(s)	1290
DraIII	CACNNNGTG	1 cut(s)	1478
DriI	GACNNNNNGTC	1 cut(s)	1585
EaeI	YGGCCR	2 cut(s)	43, 1384
Eam1105I	GACNNNNNGTC	1 cut(s)	1585
EciI	GGCGGA	2 cut(s)	71, 663
Eco130I	CCWWGG	2 cut(s)	982, 1049
Eco31I	GGTCTC	1 cut(s)	1990
Eco47I	GGWCC	2 cut(s)	515, 1496
Eco57I	CTGAAG	1 cut(s)	1824
Eco72I	CACGTG	1 cut(s)	1452
Eco91I	GGTNACC	1 cut(s)	1593
EcoO109I	RGGNCCY	1 cut(s)	1496
EcoO65I	GGTNACC	1 cut(s)	1593
EcoRI	GAATTC	1 cut(s)	300
EcoRII	CCWGG	2 cut(s)	939, 1597
EcoT14I	CCWWGG	2 cut(s)	982, 1049
ErhI	CCWWGG	2 cut(s)	982, 1049
FalI	AAGNNNNNCTT	2 cut(s)	2000, 2032
FaqI	GGGAC	3 cut(s)	1031, 1202, 1745
FauI	CCCGC	1 cut(s)	924
FbaI	TGATCA	3 cut(s)	217, 460, 1459
FblI	GTMKAC	2 cut(s)	171, 1969
Fnu4HI	GCNGC	4 cut(s)	740, 1017, 1131, 1860
FokI	GGATG	7 cut(s)	207, 349, 463, 652, 776, 1019, 1892
Fsp4HI	GCNGC	4 cut(s)	740, 1017, 1131, 1860
FspBI	CTAG	5 cut(s)	149, 512, 1050, 1223, 1401
GlaI	GCGC	1 cut(s)	183
GluI	GCNGC	4 cut(s)	740, 1017, 1131, 1860
GsaI	CCCAGC	1 cut(s)	858
GsuI	CTGGAG	3 cut(s)	1596, 1653, 1979
HaeIII	GGCC	5 cut(s)	45, 384, 726, 860, 1386
HapII	CCGG	2 cut(s)	99, 443
HgaI	GACGC	3 cut(s)	11, 68, 1942
HhaI	GCGC	1 cut(s)	184
Hin1I	GRCGYC	1 cut(s)	60
Hin6I	GCGC	1 cut(s)	182
HinP1I	GCGC	1 cut(s)	182
HincII	GTYRAC	1 cut(s)	1771
HindII	GTYRAC	1 cut(s)	1771
HindIII	AAGCTT	2 cut(s)	197, 1703
HinfI	GANTC	6 cut(s)	5, 65, 210, 975, 1077, 1799
HpaII	CCGG	2 cut(s)	99, 443
HphI	GGTGA	4 cut(s)	1251, 1319, 1382, 1490
Hpy166II	GTNNAC	6 cut(s)	172, 256, 895, 1771, 1953, 1970
Hpy8I	GTNNAC	6 cut(s)	172, 256, 895, 1771, 1953, 1970
Hpy99I	CGWCG	2 cut(s)	27, 62
HpyAV	CCTTC	7 cut(s)	680, 685, 687, 1144, 1313, 1799, 2082
HpyCH4III	ACNGT	7 cut(s)	128, 319, 622, 952, 1836, 1942, 1950
HpyCH4IV	ACGT	5 cut(s)	269, 341, 1231, 1311, 1451
HpyF3I	CTNAG	8 cut(s)	18, 259, 607, 1022, 1109, 1218, 1765, 1899
HpySE526I	ACGT	5 cut(s)	269, 341, 1231, 1311, 1451
Hsp92I	GRCGYC	1 cut(s)	60
HspAI	GCGC	1 cut(s)	182
KroI	GCCGGC	1 cut(s)	98
KroNI	GCCGGC	1 cut(s)	100
Ksp22I	TGATCA	3 cut(s)	217, 460, 1459
Kzo9I	GATC	8 cut(s)	176, 217, 410, 460, 1459, 1843, 1989, 2062
LmnI	GCTCC	3 cut(s)	815, 1672, 2047
Lsp1109I	GCAGC	4 cut(s)	751, 1003, 1117, 1846
LweI	GCATC	3 cut(s)	511, 1256, 1870
MabI	ACCWGGT	2 cut(s)	939, 1597
MaeI	CTAG	5 cut(s)	149, 512, 1050, 1223, 1401
MaeII	ACGT	5 cut(s)	269, 341, 1231, 1311, 1451
MaeIII	GTNAC	5 cut(s)	697, 1307, 1370, 1593, 1930
MalI	GATC	8 cut(s)	178, 219, 412, 462, 1461, 1845, 1991, 2064
MbiI	CCGCTC	1 cut(s)	931
MboI	GATC	8 cut(s)	176, 217, 410, 460, 1459, 1843, 1989, 2062
MboII	GAAGA	8 cut(s)	899, 1027, 1159, 1568, 1639, 1642, 1737, 1832
MfeI	CAATTG	1 cut(s)	1758
MflI	RGATCY	2 cut(s)	176, 410
MhlI	GDGCHC	1 cut(s)	258
MlsI	TGGCCA	1 cut(s)	1386
MluNI	TGGCCA	1 cut(s)	1386
MlyI	GAGTC	1 cut(s)	59
MmeI	TCCRAC	7 cut(s)	81, 301, 622, 641, 741, 952, 2003
Mox20I	TGGCCA	1 cut(s)	1386
MreI	CGCCGGCG	1 cut(s)	98
MroNI	GCCGGC	1 cut(s)	98
MroXI	GAANNNNTTC	1 cut(s)	1637
MscI	TGGCCA	1 cut(s)	1386
MseI	TTAA	6 cut(s)	39, 1125, 1160, 1203, 1289, 1986
MslI	CAYNNNNRTG	2 cut(s)	924, 1524
Msp20I	TGGCCA	1 cut(s)	1386
MspA1I	CMGCKG	1 cut(s)	1368
MspI	CCGG	2 cut(s)	99, 443
MspR9I	CCNGG	2 cut(s)	941, 1599
MunI	CAATTG	1 cut(s)	1758
Mva1269I	GAATGC	1 cut(s)	1090
MvaI	CCWGG	2 cut(s)	941, 1599
MvnI	CGCG	2 cut(s)	184, 1476
NaeI	GCCGGC	1 cut(s)	100
NdeII	GATC	8 cut(s)	176, 217, 410, 460, 1459, 1843, 1989, 2062
NgoMIV	GCCGGC	1 cut(s)	98
NlaIV	GGNNCC	3 cut(s)	796, 859, 1497
NmuCI	GTSAC	3 cut(s)	1307, 1370, 1930
NspI	RCATGY	1 cut(s)	739
PaeI	GCATGC	1 cut(s)	739
PagI	TCATGA	2 cut(s)	241, 945
PcsI	WCGNNNNNNNCGW	1 cut(s)	1946
PctI	GAATGC	1 cut(s)	1090
PdiI	GCCGGC	1 cut(s)	100
PdmI	GAANNNNTTC	1 cut(s)	1637
PfeI	GAWTC	5 cut(s)	5, 210, 975, 1077, 1799
PkrI	GCNGC	4 cut(s)	741, 1018, 1132, 1861
PleI	GAGTC	1 cut(s)	59
PmaCI	CACGTG	1 cut(s)	1452
PmlI	CACGTG	1 cut(s)	1452
PpsI	GAGTC	1 cut(s)	59
Ppu21I	YACGTR	1 cut(s)	1452
PpuMI	RGGWCCY	1 cut(s)	1496
PsiI	TTATAA	1 cut(s)	434
Psp5II	RGGWCCY	1 cut(s)	1496
Psp6I	CCWGG	2 cut(s)	939, 1597
PspCI	CACGTG	1 cut(s)	1452
PspEI	GGTNACC	1 cut(s)	1593
PspFI	CCCAGC	1 cut(s)	854
PspGI	CCWGG	2 cut(s)	939, 1597
PspN4I	GGNNCC	3 cut(s)	796, 859, 1497
PspPI	GGNCC	4 cut(s)	515, 724, 858, 1496
PspPPI	RGGWCCY	1 cut(s)	1496
PstI	CTGCAG	1 cut(s)	1043
PstNI	CAGNNNCTG	2 cut(s)	359, 524
PsuI	RGATCY	2 cut(s)	176, 410
RsaI	GTAC	7 cut(s)	125, 555, 624, 954, 1357, 1434, 1725
RsaNI	GTAC	7 cut(s)	124, 554, 623, 953, 1356, 1433, 1724
RseI	CAYNNNNRTG	2 cut(s)	924, 1524
SaqAI	TTAA	6 cut(s)	39, 1125, 1160, 1203, 1289, 1986
SatI	GCNGC	4 cut(s)	740, 1017, 1131, 1860
Sau3AI	GATC	8 cut(s)	176, 217, 410, 460, 1459, 1843, 1989, 2062
Sau96I	GGNCC	4 cut(s)	515, 724, 858, 1496
ScaI	AGTACT	1 cut(s)	1357
SchI	GAGTC	1 cut(s)	59
ScrFI	CCNGG	2 cut(s)	941, 1599
SduI	GDGCHC	1 cut(s)	258
SexAI	ACCWGGT	2 cut(s)	939, 1597
SfaNI	GCATC	3 cut(s)	511, 1256, 1870
SfcI	CTRYAG	1 cut(s)	1039
SgrAI	CRCCGGYG	1 cut(s)	98
SinI	GGWCC	2 cut(s)	515, 1496
SmiMI	CAYNNNNRTG	2 cut(s)	924, 1524
SmlI	CTYRAG	1 cut(s)	2001
SmoI	CTYRAG	1 cut(s)	2001
SphI	GCATGC	1 cut(s)	739
SsiI	CCGC	6 cut(s)	82, 96, 674, 931, 1368, 1476
SspI	AATATT	1 cut(s)	287
SspMI	CTAG	5 cut(s)	149, 512, 1050, 1223, 1401
StyD4I	CCNGG	2 cut(s)	939, 1597
StyI	CCWWGG	2 cut(s)	982, 1049
TaaI	ACNGT	7 cut(s)	128, 319, 622, 952, 1836, 1942, 1950
TaiI	ACGT	5 cut(s)	272, 344, 1234, 1314, 1454
TaqI	TCGA	2 cut(s)	30, 309
TaqII	GACCGA	2 cut(s)	354, 1349
TatI	WGTACW	3 cut(s)	553, 1355, 1723
TfiI	GAWTC	5 cut(s)	5, 210, 975, 1077, 1799
Tru1I	TTAA	6 cut(s)	39, 1125, 1160, 1203, 1289, 1986
Tru9I	TTAA	6 cut(s)	39, 1125, 1160, 1203, 1289, 1986
TscAI	CASTG	5 cut(s)	133, 805, 1048, 1721, 1962
TseFI	GTSAC	3 cut(s)	1307, 1370, 1930
TseI	GCWGC	4 cut(s)	739, 1016, 1130, 1859
Tsp45I	GTSAC	3 cut(s)	1307, 1370, 1930
TspDTI	ATGAA	9 cut(s)	230, 669, 1010, 1332, 1457, 1542, 1559, 1569, 1833
TspRI	CASTG	5 cut(s)	133, 805, 1048, 1721, 1962
VneI	GTGCAC	1 cut(s)	254
VpaK11BI	GGWCC	2 cut(s)	515, 1496
XapI	RAATTY	3 cut(s)	300, 1741, 1916
XceI	RCATGY	1 cut(s)	739
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1182
XmaJI	CCTAGG	1 cut(s)	1049
XmiI	GTMKAC	2 cut(s)	171, 1969
XmnI	GAANNNNTTC	1 cut(s)	1637
XspI	CTAG	5 cut(s)	149, 512, 1050, 1223, 1401
ZrmI	AGTACT	1 cut(s)	1357

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.