pycom13g16310

Long chain acyl-CoA synthetase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
12026962 .. 12032500
5539 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g16310.7

Sequence Viewer

Length: 1314 bp
ATGTATACAGCTGCTCACTCCCCATTGAAGCTTGTTAGTAGATTCCCTGATCATCCTGAAATTGGTACACTGCATGATAATTTTGTGCATTCTGTTGAAACTTTCCGAGATTATAAATATTTGGGCACACGAATTCGCGTTGATGGAACAGTTGGAGATTACAAATGGATGACGTACGGAGAAGCAGGTACTGCTCGGTCAGGAATAGGTTCTGGCCTAATTTATCATGGAATACCAAAGGGATCTTCCATTGGATTGTATTTTATCAATAGACCTGAGTGGCTCATCGTTGATCATGCCTGCTCTGCGTATTCGTACATATCAGTTCCTTTATATGACACTCTCGGTCCAGATGCTGTCAAGTACATTGTAAATCATGCTGTTGTACAAGTTATCTTTTGTGTGCCTCAAACATTGAATAGTTTGTTGAGCTTCTTGGCGGATATTCCAACTGTACGCCTGATTGTGGTTGTTGGGGGAGTGGATGATCAAATTCCATCCCTTCCATCATCGACCGGAGTGAAGGTTGTAACATATTCAAAATTGCTATCTCAGGGCTCTAGTAGTATTCAGCCTTTTTGCCCACCAAAACCAGAGGATGTTGCTACAATATGCTACACAAGTGGTACAACTGGCACCCCAAAGGGAGCTGTATTGACTCATGGAAACTTTATTGCAAATGTTGCTGGGTCCACTATTGCTGTCAAATTCTACGCGTCTGACGTCTACATATCATATCTTCCCTTGGCACACATTTATGAACGGGTTAACCAGGTCATGACAGCATATTTTGGAGTTGCTGTTGGATTCTATCAAGGGGATAATCTAAAATTAATGGACGATATGGCAGCACTAAGACCTACCATCTTCTGCAGTGTTCCTAGGCTGTATAACAGAATATATGCGGGTATTACAAATGCGGTAAAGACATCCGGTGCGCTGAGGGAGAGGCTATTTAATGCTGCTTACAATGCCAAGAAGCAGGCACTATTAAGTGGAAAAACTGCATCCCCCATGTGGGACAGATTGGTATTCAATAAGATAAAGGCTAAGCTAGGAGGACGAGTTCGTTTTATGGCATCAGGTGCTTCACCCTTGTCTCCTGATGTGATGGAATTTCTAAAGATATGCTTTGGTGGTGAAGTAAATGAAGGGTATGGAATGACTGAGACCTCTTGTGTTATTAGTGCTATGGATGGGGCTGACAACATATCTGGGCACGTTGGCTCTCCTAATCCAGCTTGTGAAATAAAGCTTGTTGATGTACCGGAAATGAACTATACATCTGATCGATCAACCCTATCCTCGTGGTGA

Protein Analysis

438

Amino Acids

47.43

Weight (kDa)

8.01

Isoelectric Point (pI)

27.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 114
AatII GACGTC 1 cut(s) 726
Acc36I ACCTGC 1 cut(s) 176
AccB1I GGYRCC 1 cut(s) 635
AccI GTMKAC 2 cut(s) 5, 726
AccII CGCG 2 cut(s) 138, 716
AciI CCGC 3 cut(s) 440, 905, 920
AclWI GGATC 1 cut(s) 250
AcsI RAATTY 4 cut(s) 132, 492, 707, 1115
AcyI GRCGYC 1 cut(s) 723
AfaI GTAC 9 cut(s) 67, 176, 190, 317, 365, 387, 456, 628, 1266
AfiI CCNNNNNNNGG 4 cut(s) 62, 466, 1017, 1018
AflIII ACRYGT 1 cut(s) 714
AgsI TTSAA 5 cut(s) 28, 98, 418, 540, 1036
AjnI CCWGG 1 cut(s) 771
AjuI GAANNNNNNNTTGG 2 cut(s) 229, 261
AloI GAACNNNNNNTCC 2 cut(s) 1050, 1082
AluBI AGCT 7 cut(s) 11, 31, 432, 650, 1054, 1241, 1255
AluI AGCT 7 cut(s) 11, 31, 432, 650, 1054, 1241, 1255
Alw26I GTCTC 2 cut(s) 1104, 1163
AlwI GGATC 1 cut(s) 250
AlwNI CAGNNNCTG 2 cut(s) 191, 356
AoxI GGCC 1 cut(s) 214
ApeKI GCWGC 3 cut(s) 11, 848, 962
ApoI RAATTY 4 cut(s) 132, 492, 707, 1115
AseI ATTAAT 1 cut(s) 833
Asp700I GAANNNNTTC 1 cut(s) 208
AspA2I CCTAGG 1 cut(s) 881
AspLEI GCGC 1 cut(s) 940
AspS9I GGNCC 2 cut(s) 347, 690
AsuHPI GGTGA 2 cut(s) 1083, 1151
AvaII GGWCC 2 cut(s) 347, 690
AvrII CCTAGG 1 cut(s) 881
BaeGI GKGCMC 2 cut(s) 128, 1221
BanI GGYRCC 1 cut(s) 635
BanII GRGCYC 1 cut(s) 560
BauI CACGAG 1 cut(s) 1306
BbvCI CCTCAGC 1 cut(s) 941
BbvI GCAGC 2 cut(s) 860, 949
BccI CCATC 6 cut(s) 137, 505, 514, 872, 1105, 1190
BciT130I CCWGG 1 cut(s) 773
BclI TGATCA 3 cut(s) 49, 292, 487
BcoDI GTCTC 2 cut(s) 1104, 1163
BfaI CTAG 3 cut(s) 561, 882, 1055
BfmI CTRYAG 1 cut(s) 871
BfuAI ACCTGC 1 cut(s) 176
BisI GCNGC 3 cut(s) 12, 849, 963
BlnI CCTAGG 1 cut(s) 881
BlpI GCTNAGC 1 cut(s) 1050
BlsI GCNGC 3 cut(s) 13, 850, 964
Bme1390I CCNGG 1 cut(s) 773
Bme18I GGWCC 2 cut(s) 347, 690
BmgT120I GGNCC 2 cut(s) 347, 690
BmiI GGNNCC 2 cut(s) 637, 691
BmrFI CCNGG 1 cut(s) 773
BmsI GCATC 3 cut(s) 343, 1016, 1088
Bpu10I CCTNAGC 1 cut(s) 941
Bpu1102I GCTNAGC 1 cut(s) 1050
Bsa29I ATCGAT 1 cut(s) 1291
BsaHI GRCGYC 1 cut(s) 723
BsaI GGTCTC 1 cut(s) 1163
BsaJI CCNNGG 2 cut(s) 744, 881
BsaWI WCCGGW 3 cut(s) 515, 932, 1267
BsaXI ACNNNNNCTCC 6 cut(s) 510, 540, 786, 816, 1050, 1080
Bsc4I CCNNNNNNNGG 4 cut(s) 62, 466, 1017, 1018
Bse1I ACTGG 1 cut(s) 637
BseBI CCWGG 1 cut(s) 773
BseCI ATCGAT 1 cut(s) 1291
BseDI CCNNGG 2 cut(s) 744, 881
BseGI GGATG 8 cut(s) 52, 174, 490, 497, 604, 929, 1007, 1201
BseLI CCNNNNNNNGG 4 cut(s) 62, 466, 1017, 1018
BseMII CTCAG 4 cut(s) 267, 566, 932, 1158
BseNI ACTGG 1 cut(s) 637
BseSI GKGCMC 2 cut(s) 128, 1221
BseXI GCAGC 2 cut(s) 860, 949
BseYI CCCAGC 1 cut(s) 686
Bsh1236I CGCG 2 cut(s) 138, 716
Bsh1285I CGRYCG 1 cut(s) 516
BshFI GGCC 1 cut(s) 216
BshNI GGYRCC 1 cut(s) 635
BshVI ATCGAT 1 cut(s) 1291
BsiEI CGRYCG 1 cut(s) 516
BsiSI CCGG 3 cut(s) 516, 933, 1268
BsiWI CGTACG 1 cut(s) 174
BslFI GGGAC 1 cut(s) 1034
BslI CCNNNNNNNGG 4 cut(s) 62, 466, 1017, 1018
BsmAI GTCTC 2 cut(s) 1104, 1163
BsmFI GGGAC 1 cut(s) 1034
BsmI GAATGC 1 cut(s) 88
BsnI GGCC 1 cut(s) 216
Bso31I GGTCTC 1 cut(s) 1163
Bsp1286I GDGCHC 3 cut(s) 128, 560, 1221
Bsp1407I TGTACA 1 cut(s) 385
Bsp143I GATC 6 cut(s) 49, 242, 292, 487, 1288, 1292
Bsp1720I GCTNAGC 1 cut(s) 1050
BspACI CCGC 3 cut(s) 440, 905, 920
BspANI GGCC 1 cut(s) 216
BspCNI CTCAG 4 cut(s) 268, 565, 933, 1159
BspDI ATCGAT 1 cut(s) 1291
BspFNI CGCG 2 cut(s) 138, 716
BspHI TCATGA 1 cut(s) 777
BspLI GGNNCC 2 cut(s) 637, 691
BspMAI CTGCAG 1 cut(s) 875
BspMI ACCTGC 1 cut(s) 176
BspPI GGATC 1 cut(s) 250
BspT107I GGYRCC 1 cut(s) 635
BspTNI GGTCTC 1 cut(s) 1163
BsrGI TGTACA 1 cut(s) 385
BsrI ACTGG 1 cut(s) 637
BssECI CCNNGG 2 cut(s) 744, 881
BssMI GATC 6 cut(s) 49, 242, 292, 487, 1288, 1292
BssNAI GTATAC 1 cut(s) 6
BssNI GRCGYC 1 cut(s) 723
BssSI CACGAG 1 cut(s) 1306
BssT1I CCWWGG 2 cut(s) 744, 881
Bst1107I GTATAC 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 1306
Bst2UI CCWGG 1 cut(s) 773
Bst4CI ACNGT 2 cut(s) 151, 454
BstACI GRCGYC 1 cut(s) 723
BstAPI GCANNNNNTGC 3 cut(s) 191, 683, 1085
BstAUI TGTACA 1 cut(s) 385
BstC8I GCNNGC 2 cut(s) 301, 984
BstDEI CTNAG 6 cut(s) 276, 552, 854, 941, 1050, 1167
BstF5I GGATG 8 cut(s) 52, 174, 490, 497, 604, 929, 1007, 1201
BstFNI CGCG 2 cut(s) 138, 716
BstHHI GCGC 1 cut(s) 940
BstKTI GATC 6 cut(s) 52, 245, 295, 490, 1291, 1295
BstMAI GTCTC 2 cut(s) 1104, 1163
BstMBI GATC 6 cut(s) 49, 242, 292, 487, 1288, 1292
BstMCI CGRYCG 1 cut(s) 516
BstMWI GCNNNNNNNGC 5 cut(s) 191, 305, 683, 971, 1085
BstNI CCWGG 1 cut(s) 773
BstSCI CCNGG 1 cut(s) 771
BstSFI CTRYAG 1 cut(s) 871
BstSLI GKGCMC 2 cut(s) 128, 1221
BstUI CGCG 2 cut(s) 138, 716
BstV1I GCAGC 2 cut(s) 860, 949
BstX2I RGATCY 1 cut(s) 242
BstYI RGATCY 1 cut(s) 242
BstZ17I GTATAC 1 cut(s) 6
Bsu15I ATCGAT 1 cut(s) 1291
BsuRI GGCC 1 cut(s) 216
BsuTUI ATCGAT 1 cut(s) 1291
BtsCI GGATG 8 cut(s) 52, 174, 490, 497, 604, 929, 1007, 1201
BtsI GCAGTG 2 cut(s) 68, 880
BtsIMutI CAGTG 2 cut(s) 68, 880
BveI ACCTGC 1 cut(s) 176
Cac8I GCNNGC 2 cut(s) 301, 984
CaiI CAGNNNCTG 2 cut(s) 191, 356
CciI TCATGA 1 cut(s) 777
CfoI GCGC 1 cut(s) 940
Cfr13I GGNCC 2 cut(s) 347, 690
ClaI ATCGAT 1 cut(s) 1291
CseI GACGC 1 cut(s) 705
CsiI ACCWGGT 1 cut(s) 771
Csp6I GTAC 9 cut(s) 66, 175, 189, 316, 364, 386, 455, 627, 1265
CviAII CATG 7 cut(s) 74, 227, 296, 377, 662, 778, 1015
CviQI GTAC 9 cut(s) 66, 175, 189, 316, 364, 386, 455, 627, 1265
DdeI CTNAG 6 cut(s) 276, 552, 854, 941, 1050, 1167
DpnI GATC 6 cut(s) 51, 244, 294, 489, 1290, 1294
DpnII GATC 6 cut(s) 49, 242, 292, 487, 1288, 1292
EciI GGCGGA 1 cut(s) 455
Eco130I CCWWGG 2 cut(s) 744, 881
Eco24I GRGCYC 1 cut(s) 560
Eco31I GGTCTC 1 cut(s) 1163
Eco47I GGWCC 2 cut(s) 347, 690
EcoRI GAATTC 1 cut(s) 132
EcoRII CCWGG 1 cut(s) 771
EcoT14I CCWWGG 2 cut(s) 744, 881
EcoT38I GRGCYC 1 cut(s) 560
ErhI CCWWGG 2 cut(s) 744, 881
FaeI CATG 7 cut(s) 77, 230, 299, 380, 665, 781, 1018
FalI AAGNNNNNCTT 2 cut(s) 1115, 1147
FaqI GGGAC 1 cut(s) 1034
FatI CATG 7 cut(s) 73, 226, 295, 376, 661, 777, 1014
FauI CCCGC 1 cut(s) 898
FbaI TGATCA 3 cut(s) 49, 292, 487
FblI GTMKAC 2 cut(s) 5, 726
Fnu4HI GCNGC 3 cut(s) 12, 849, 963
FokI GGATG 8 cut(s) 39, 181, 484, 497, 611, 916, 994, 1208
FriOI GRGCYC 1 cut(s) 560
Fsp4HI GCNGC 3 cut(s) 12, 849, 963
FspBI CTAG 3 cut(s) 561, 882, 1055
GlaI GCGC 1 cut(s) 939
GluI GCNGC 3 cut(s) 12, 849, 963
GsaI CCCAGC 1 cut(s) 690
HaeIII GGCC 1 cut(s) 216
HapII CCGG 3 cut(s) 516, 933, 1268
HgaI GACGC 1 cut(s) 705
HhaI GCGC 1 cut(s) 940
Hin1I GRCGYC 1 cut(s) 723
Hin1II CATG 7 cut(s) 77, 230, 299, 380, 665, 781, 1018
Hin6I GCGC 1 cut(s) 938
HinP1I GCGC 1 cut(s) 938
HincII GTYRAC 1 cut(s) 769
HindII GTYRAC 1 cut(s) 769
HindIII AAGCTT 2 cut(s) 29, 1253
HinfI GANTC 3 cut(s) 42, 658, 807
HpaI GTTAAC 1 cut(s) 769
HpaII CCGG 3 cut(s) 516, 933, 1268
HphI GGTGA 2 cut(s) 1083, 1151
Hpy166II GTNNAC 5 cut(s) 6, 68, 693, 727, 769
Hpy188I TCNGA 3 cut(s) 107, 721, 1288
Hpy188III TCNNGA 5 cut(s) 56, 201, 350, 778, 1103
Hpy8I GTNNAC 5 cut(s) 6, 68, 693, 727, 769
HpyAV CCTTC 3 cut(s) 512, 517, 1145
HpyCH4III ACNGT 2 cut(s) 151, 454
HpyCH4IV ACGT 3 cut(s) 173, 723, 1221
HpyCH4V TGCA 5 cut(s) 73, 88, 677, 873, 1007
HpyF10VI GCNNNNNNNGC 5 cut(s) 191, 305, 683, 971, 1085
HpyF3I CTNAG 6 cut(s) 276, 552, 854, 941, 1050, 1167
HpySE526I ACGT 3 cut(s) 173, 723, 1221
Hsp92I GRCGYC 1 cut(s) 723
Hsp92II CATG 7 cut(s) 77, 230, 299, 380, 665, 781, 1018
HspAI GCGC 1 cut(s) 938
Ksp22I TGATCA 3 cut(s) 49, 292, 487
KspAI GTTAAC 1 cut(s) 769
Kzo9I GATC 6 cut(s) 49, 242, 292, 487, 1288, 1292
LmnI GCTCC 1 cut(s) 647
Lsp1109I GCAGC 2 cut(s) 860, 949
LweI GCATC 3 cut(s) 343, 1016, 1088
MabI ACCWGGT 1 cut(s) 771
MaeI CTAG 3 cut(s) 561, 882, 1055
MaeII ACGT 3 cut(s) 173, 723, 1221
MaeIII GTNAC 1 cut(s) 529
MalI GATC 6 cut(s) 51, 244, 294, 489, 1290, 1294
MboI GATC 6 cut(s) 49, 242, 292, 487, 1288, 1292
MboII GAAGA 3 cut(s) 237, 731, 859
MflI RGATCY 1 cut(s) 242
MhlI GDGCHC 3 cut(s) 128, 560, 1221
MluCI AATT 9 cut(s) 60, 79, 132, 219, 492, 542, 707, 830, 1115
MluI ACGCGT 1 cut(s) 714
MlyI GAGTC 1 cut(s) 652
MmeI TCCRAC 3 cut(s) 133, 473, 784
MnlI CCTC 6 cut(s) 417, 589, 936, 942, 1052, 1183
MroXI GAANNNNTTC 1 cut(s) 208
MseI TTAA 4 cut(s) 768, 833, 957, 992
MslI CAYNNNNRTG 1 cut(s) 756
MspA1I CMGCKG 1 cut(s) 11
MspI CCGG 3 cut(s) 516, 933, 1268
MspR9I CCNGG 1 cut(s) 773
Mva1269I GAATGC 1 cut(s) 88
MvaI CCWGG 1 cut(s) 773
MvnI CGCG 2 cut(s) 138, 716
MwoI GCNNNNNNNGC 5 cut(s) 191, 305, 683, 971, 1085
NdeII GATC 6 cut(s) 49, 242, 292, 487, 1288, 1292
NlaIII CATG 7 cut(s) 77, 230, 299, 380, 665, 781, 1018
NlaIV GGNNCC 2 cut(s) 637, 691
PagI TCATGA 1 cut(s) 777
PcsI WCGNNNNNNNCGW 1 cut(s) 720
PctI GAATGC 1 cut(s) 88
PdmI GAANNNNTTC 1 cut(s) 208
PfeI GAWTC 2 cut(s) 42, 807
Pfl23II CGTACG 1 cut(s) 174
PkrI GCNGC 3 cut(s) 13, 850, 964
PleI GAGTC 1 cut(s) 652
PpsI GAGTC 1 cut(s) 652
PshBI ATTAAT 1 cut(s) 833
PsiI TTATAA 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 771
PspFI CCCAGC 1 cut(s) 686
PspGI CCWGG 1 cut(s) 771
PspLI CGTACG 1 cut(s) 174
PspN4I GGNNCC 2 cut(s) 637, 691
PspPI GGNCC 2 cut(s) 347, 690
PstI CTGCAG 1 cut(s) 875
PstNI CAGNNNCTG 2 cut(s) 191, 356
PsuI RGATCY 1 cut(s) 242
PvuII CAGCTG 1 cut(s) 11
RsaI GTAC 9 cut(s) 67, 176, 190, 317, 365, 387, 456, 628, 1266
RsaNI GTAC 9 cut(s) 66, 175, 189, 316, 364, 386, 455, 627, 1265
RseI CAYNNNNRTG 1 cut(s) 756
SaqAI TTAA 4 cut(s) 768, 833, 957, 992
SatI GCNGC 3 cut(s) 12, 849, 963
Sau3AI GATC 6 cut(s) 49, 242, 292, 487, 1288, 1292
Sau96I GGNCC 2 cut(s) 347, 690
SchI GAGTC 1 cut(s) 652
ScrFI CCNGG 1 cut(s) 773
SduI GDGCHC 3 cut(s) 128, 560, 1221
SexAI ACCWGGT 1 cut(s) 771
SfaNI GCATC 3 cut(s) 343, 1016, 1088
SfcI CTRYAG 1 cut(s) 871
SinI GGWCC 2 cut(s) 347, 690
SmiMI CAYNNNNRTG 1 cut(s) 756
Sse9I AATT 9 cut(s) 60, 79, 132, 219, 492, 542, 707, 830, 1115
SsiI CCGC 3 cut(s) 440, 905, 920
SspI AATATT 1 cut(s) 119
SspMI CTAG 3 cut(s) 561, 882, 1055
StyD4I CCNGG 1 cut(s) 771
StyI CCWWGG 2 cut(s) 744, 881
TaaI ACNGT 2 cut(s) 151, 454
TaiI ACGT 3 cut(s) 176, 726, 1224
TaqI TCGA 2 cut(s) 512, 1291
TaqII GACCGA 2 cut(s) 186, 335
TasI AATT 9 cut(s) 60, 79, 132, 219, 492, 542, 707, 830, 1115
TatI WGTACW 2 cut(s) 363, 385
TfiI GAWTC 2 cut(s) 42, 807
Tru1I TTAA 4 cut(s) 768, 833, 957, 992
Tru9I TTAA 4 cut(s) 768, 833, 957, 992
TscAI CASTG 2 cut(s) 75, 880
TseI GCWGC 3 cut(s) 11, 848, 962
TspDTI ATGAA 3 cut(s) 774, 1164, 1289
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 2 cut(s) 75, 880
VpaK11BI GGWCC 2 cut(s) 347, 690
VspI ATTAAT 1 cut(s) 833
XapI RAATTY 4 cut(s) 132, 492, 707, 1115
XmaJI CCTAGG 1 cut(s) 881
XmiI GTMKAC 2 cut(s) 5, 726
XmnI GAANNNNTTC 1 cut(s) 208
XspI CTAG 3 cut(s) 561, 882, 1055
ZraI GACGTC 1 cut(s) 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.