Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0002849

Physical Location & Seq

Genomic Coordinates Forward (+)

26887646 .. 26890862

Gene Structure 3217 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1175400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGCCCAACTTGAGCCCAAATTCATCATCTTACCCGCCTTTGGCAGGCAGTTCGTGCGAGCACACCGTCGTAGAAACCCACCTAGGCCGCTCCGACGGGTCTCTGCTGCTCTCGAAACATGCACGTATAGAACAAATCAAATGGCGAGTCCGAGTCCCTCAGAATCCGACCCGCAAGACGCCCACAACTCCTTTGTTTGGGAGGAAAGCTCTCAGCTCTATTTCCATGCCGGCAGTGGATTTTACCACGACCCAACAGCCGGCTGGTACTACAGCACCCGAGATGGCCTTTACTACAAGTTCGAAGATGGAAATTACGTCCTTCTTCCCTCTCCCCAGGATGGTAATTTGGAAAATCCCAATCAAGAATATCAATTTTCACATGAAAATCCACGCATACAAACTGTTCCGCAGGAACCCAATGAAGTTGCAGGGGATACAGATTGCCGTAGTAGCAGTGATGTACCCGGAATTCCCCCTCCTGCCTCGGAATGGTTGGAAGATACGCTTATTGATCTTTTCTTGACGGGTTATTCCAATTTAAAACCCAATGCTGCTGATGATATGACATTGTTTCCTGAAACAGATGTTGAGTTGCGAGCAGACGTTGCAGGGAACAGTGATAGTCAGGAGCTCAATGAACGTGAATTGACTCCCGAGGACCTTGATGCTGCAATTAAGTCAAAAGAAAACGTCTCTGATGAAGGTGCTTCATGGGATGAAGAGAACTGGCGAGCACAGTATGGTCAGGTCATTCAATCTGAAGAAGTGTCTATCCCAGAGTCTTCCCTTGTGAGTTTATGGGACTGGGAAATGATCACAAAGCCCAGAAAGGATGGAAAAGGTCAGGAAGCGAGGCTTGTTGGGAGATTAATGAGACAGTCTGCTAAGCTTCATCCTTCTATGCCTTCTGGTGGTGGCCGTCTAAAAACTGCTCCAATATGTGAAGTACATCTTGATCTGGTACGAGTTATAACAGGACAAATCTATAAATTGCGGAGTCCCAGTAGACGATACCTATCTTCCTTGCCAACTTATGATTCTTCAAATCCAACAAAAGATTGGGGCTTCCCTGAATTATCAGTCAACAAACAAATTCTCCCCAGCTCTAAATCCAGTGTAAACTGTGAATCAGAAACTTTAGATGGAGCGGCAGTTAGCAAAGATTCATCTCTGTTGTGTGGCCAAACATACGAAAAGCATGAGAGCTATGCATATAAGGATAGAGCTGCTGATAGAAGAGCCTTGCACGGTGGTTTCGGAGTGGGTCCAGGACAAAAGAATTCAATAGTTGGTGATAGTGATCTACCAGATGTCTCTACGGAGGAAGCCGCGGCAGAGGCCTTGAACATGTCATTTGGAGAGGGCAGTTATGCGAGAAAAATTCTAGAAAGCATGGGCTGGAAAGAGGGAGAAACGCTTGGCAAAACTACAAATGGATTGGCGGAACCTATTCAGGCACACGGCAACATTGGTAGTGCTGGATTAGGGTGGCCTCAGGGAAGAAGATTTACGCACCACGACAGCAGGGCCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0010941 GO:0010942 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0031323 GO:0034622 GO:0034641 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048024 GO:0048518 GO:0048522 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1903311

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch

Protein Analysis

513

Amino Acids

56.78

Weight (kDa)

5.02

Isoelectric Point (pI)

55.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-patch	PF01585	457 - 497	5.3e-11	G-patch domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002849)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34140 AT4G34140 AT4G34140 AT4G34140 AT4G34140 AT4G34140 AT4G34140 AT4G34140 AT4G34140 AT4G34140
fragaria_vesca	FvH4_5g05850 FvH4_5g05850 FvH4_5g05850 FvH4_5g05850 FvH4_5g05850 FvH4_5g05850 FvH4_5g05850 FvH4_5g05850 FvH4_5g05850 FvH4_5g05850
malus_domestica	MD14G1175400.v1.1
prunus_persica	Prupe.5G169300_v2.0.a1 Prupe.5G169300_v2.0.a1 Prupe.5G169300_v2.0.a1 Prupe.5G169300_v2.0.a1
pyrus_communis	pycom14g14640
rosa_chinensis	RchiOBHm_Chr7g0192971
rosa_laevigata	RLG00000004306
rosa_multiflora	Rmu_sc0002040.1_g000065 Rmu_sc0013925.1_g000001
rosa_roxburghii	Rroxscaffold_3G00231200 Rroxscaffold_3G00262490
rosa_rugosa	Rorug07G0006900
rosa_samantha	Rh4DG172700 Rh7AG131900 Rh7BG132700 Rh7CG135900 Rh7DG133800
rosa_wichuraiana	Rw7G011250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	974
AccBSI	CCGCTC	2 cut(s)	91, 1151
AccI	GTMKAC	1 cut(s)	1009
AccII	CGCG	1 cut(s)	1334
AciI	CCGC	9 cut(s)	36, 89, 173, 410, 997, 1151, 1332, 1334, 1445
AcoI	YGGCCR	2 cut(s)	919, 1183
AcsI	RAATTY	5 cut(s)	20, 471, 1095, 1282, 1383
AcuI	CTGAAG	1 cut(s)	783
AcyI	GRCGYC	1 cut(s)	180
AfaI	GTAC	4 cut(s)	269, 465, 951, 966
AfiI	CCNNNNNNNGG	7 cut(s)	41, 45, 198, 260, 341, 492, 914
AflIII	ACRYGT	1 cut(s)	1350
AgsI	TTSAA	4 cut(s)	758, 1047, 1287, 1348
AjnI	CCWGG	2 cut(s)	336, 1270
AjuI	GAANNNNNNNTTGG	2 cut(s)	1024, 1056
AluBI	AGCT	7 cut(s)	210, 217, 634, 892, 1107, 1209, 1229
AluI	AGCT	7 cut(s)	210, 217, 634, 892, 1107, 1209, 1229
Alw21I	GWGCWC	3 cut(s)	64, 636, 739
Alw26I	GTCTC	4 cut(s)	106, 700, 871, 1321
Ama87I	CYCGRG	2 cut(s)	279, 656
AoxI	GGCC	8 cut(s)	3, 86, 286, 919, 1183, 1341, 1493, 1530
ApeKI	GCWGC	4 cut(s)	107, 554, 671, 1229
ApoI	RAATTY	5 cut(s)	20, 471, 1095, 1282, 1383
ArsI	GACNNNNNNTTYG	2 cut(s)	133, 165
AseI	ATTAAT	1 cut(s)	872
Asp700I	GAANNNNTTC	1 cut(s)	1452
AspA2I	CCTAGG	1 cut(s)	83
AspS9I	GGNCC	4 cut(s)	4, 661, 1268, 1530
AsuC2I	CCSGG	1 cut(s)	468
AsuHPI	GGTGA	1 cut(s)	1307
AsuII	TTCGAA	1 cut(s)	303
AvaI	CYCGRG	2 cut(s)	279, 656
AvaII	GGWCC	2 cut(s)	661, 1268
AvrII	CCTAGG	1 cut(s)	83
AxyI	CCTNAGG	1 cut(s)	1497
BalI	TGGCCA	1 cut(s)	1185
BanII	GRGCYC	2 cut(s)	18, 636
BarI	GAAGNNNNNNTAC	2 cut(s)	1495, 1527
BbsI	GAAGAC	1 cut(s)	777
Bbv12I	GWGCWC	3 cut(s)	64, 636, 739
BbvI	GCAGC	4 cut(s)	94, 541, 658, 1216
BccI	CCATC	5 cut(s)	278, 302, 335, 830, 1139
BceAI	ACGGC	3 cut(s)	432, 906, 1480
BcgI	CGANNNNNNTGC	2 cut(s)	34, 68
BciT130I	CCWGG	2 cut(s)	338, 1272
BciVI	GTATCC	1 cut(s)	430
BclI	TGATCA	1 cut(s)	816
BcnI	CCSGG	1 cut(s)	468
BcoDI	GTCTC	4 cut(s)	106, 700, 871, 1321
BfaI	CTAG	2 cut(s)	84, 1388
BfmI	CTRYAG	1 cut(s)	271
BfuI	GTATCC	1 cut(s)	430
BisI	GCNGC	8 cut(s)	89, 108, 555, 672, 1152, 1230, 1332, 1335
BlnI	CCTAGG	1 cut(s)	83
BlpI	GCTNAGC	1 cut(s)	888
BlsI	GCNGC	8 cut(s)	90, 109, 556, 673, 1153, 1231, 1333, 1336
Bme1390I	CCNGG	3 cut(s)	338, 468, 1272
Bme18I	GGWCC	2 cut(s)	661, 1268
BmeT110I	CYCGRG	2 cut(s)	279, 656
BmgT120I	GGNCC	4 cut(s)	4, 661, 1268, 1530
BmiI	GGNNCC	3 cut(s)	417, 1269, 1449
BmrFI	CCNGG	3 cut(s)	338, 468, 1272
BmrI	ACTGGG	2 cut(s)	817, 999
BmsI	GCATC	1 cut(s)	658
BmuI	ACTGGG	2 cut(s)	817, 999
BpiI	GAAGAC	1 cut(s)	777
BplI	GAGNNNNNCTC	2 cut(s)	194, 226
Bpu1102I	GCTNAGC	1 cut(s)	888
Bpu14I	TTCGAA	1 cut(s)	303
BpuEI	CTTGAG	1 cut(s)	32
BpuMI	CCSGG	1 cut(s)	468
BsaAI	YACGTR	1 cut(s)	126
BsaBI	GATNNNNATC	2 cut(s)	1018, 1302
BsaHI	GRCGYC	1 cut(s)	180
BsaI	GGTCTC	1 cut(s)	106
BsaJI	CCNNGG	5 cut(s)	83, 336, 486, 657, 1332
BsaXI	ACNNNNNCTCC	6 cut(s)	991, 1021, 1083, 1113, 1140, 1170
Bsc4I	CCNNNNNNNGG	7 cut(s)	41, 45, 198, 260, 341, 492, 914
Bse118I	RCCGGY	2 cut(s)	230, 260
Bse1I	ACTGG	4 cut(s)	734, 812, 1005, 1116
Bse21I	CCTNAGG	1 cut(s)	1497
Bse8I	GATNNNNATC	2 cut(s)	1018, 1302
BseBI	CCWGG	2 cut(s)	338, 1272
BseDI	CCNNGG	5 cut(s)	83, 336, 486, 657, 1332
BseGI	GGATG	4 cut(s)	346, 724, 841, 895
BseJI	GATNNNNATC	2 cut(s)	1018, 1302
BseLI	CCNNNNNNNGG	7 cut(s)	41, 45, 198, 260, 341, 492, 914
BseMII	CTCAG	3 cut(s)	174, 227, 1511
BseNI	ACTGG	4 cut(s)	734, 812, 1005, 1116
BseXI	GCAGC	4 cut(s)	94, 541, 658, 1216
BseYI	CCCAGC	1 cut(s)	1103
Bsh1236I	CGCG	1 cut(s)	1334
BshFI	GGCC	8 cut(s)	5, 88, 288, 921, 1185, 1343, 1495, 1532
BsiHKAI	GWGCWC	3 cut(s)	64, 636, 739
BsiHKCI	CYCGRG	2 cut(s)	279, 656
BsiSI	CCGG	3 cut(s)	231, 261, 468
BslFI	GGGAC	3 cut(s)	141, 818, 987
BslI	CCNNNNNNNGG	7 cut(s)	41, 45, 198, 260, 341, 492, 914
BsmAI	GTCTC	4 cut(s)	106, 700, 871, 1321
BsmBI	CGTCTC	1 cut(s)	700
BsmFI	GGGAC	3 cut(s)	141, 818, 987
BsnI	GGCC	8 cut(s)	5, 88, 288, 921, 1185, 1343, 1495, 1532
Bso31I	GGTCTC	1 cut(s)	106
BsoBI	CYCGRG	2 cut(s)	279, 656
Bsp119I	TTCGAA	1 cut(s)	303
Bsp1286I	GDGCHC	4 cut(s)	18, 64, 636, 739
Bsp143I	GATC	4 cut(s)	514, 816, 958, 1303
Bsp1720I	GCTNAGC	1 cut(s)	888
BspACI	CCGC	9 cut(s)	36, 89, 173, 410, 997, 1151, 1332, 1334, 1445
BspANI	GGCC	8 cut(s)	5, 88, 288, 921, 1185, 1343, 1495, 1532
BspCNI	CTCAG	3 cut(s)	173, 226, 1510
BspFNI	CGCG	1 cut(s)	1334
BspLI	GGNNCC	3 cut(s)	417, 1269, 1449
BspQI	GCTCTTC	1 cut(s)	1234
BspT104I	TTCGAA	1 cut(s)	303
BspTNI	GGTCTC	1 cut(s)	106
BsrBI	CCGCTC	2 cut(s)	91, 1151
BsrFI	RCCGGY	2 cut(s)	230, 260
BsrI	ACTGG	4 cut(s)	734, 812, 1005, 1116
BssAI	RCCGGY	2 cut(s)	230, 260
BssECI	CCNNGG	5 cut(s)	83, 336, 486, 657, 1332
BssMI	GATC	4 cut(s)	514, 816, 958, 1303
BssNI	GRCGYC	1 cut(s)	180
BssT1I	CCWWGG	1 cut(s)	83
Bst2UI	CCWGG	2 cut(s)	338, 1272
Bst4CI	ACNGT	7 cut(s)	68, 406, 620, 741, 882, 1127, 1253
Bst6I	CTCTTC	2 cut(s)	717, 1234
BstACI	GRCGYC	1 cut(s)	180
BstAPI	GCANNNNNTGC	2 cut(s)	55, 608
BstBAI	YACGTR	1 cut(s)	126
BstBI	TTCGAA	1 cut(s)	303
BstC8I	GCNNGC	6 cut(s)	47, 60, 232, 262, 600, 735
BstDEI	CTNAG	4 cut(s)	160, 213, 888, 1497
BstDSI	CCRYGG	1 cut(s)	1332
BstENI	CCTNNNNNAGG	1 cut(s)	43
BstF5I	GGATG	4 cut(s)	346, 724, 841, 895
BstFNI	CGCG	1 cut(s)	1334
BstKTI	GATC	4 cut(s)	517, 819, 961, 1306
BstMAI	GTCTC	4 cut(s)	106, 700, 871, 1321
BstMBI	GATC	4 cut(s)	514, 816, 958, 1303
BstMWI	GCNNNNNNNGC	4 cut(s)	55, 453, 608, 1340
BstNI	CCWGG	2 cut(s)	338, 1272
BstNSI	RCATGY	2 cut(s)	123, 1354
BstSCI	CCNGG	3 cut(s)	336, 466, 1270
BstSFI	CTRYAG	1 cut(s)	271
BstUI	CGCG	1 cut(s)	1334
BstV1I	GCAGC	4 cut(s)	94, 541, 658, 1216
BstV2I	GAAGAC	1 cut(s)	777
Bsu36I	CCTNAGG	1 cut(s)	1497
BsuI	GTATCC	1 cut(s)	430
BsuRI	GGCC	8 cut(s)	5, 88, 288, 921, 1185, 1343, 1495, 1532
BtgI	CCRYGG	1 cut(s)	1332
BtsCI	GGATG	4 cut(s)	346, 724, 841, 895
BtsI	GCAGTG	2 cut(s)	241, 463
BtsIMutI	CAGTG	4 cut(s)	241, 463, 625, 1123
Cac8I	GCNNGC	6 cut(s)	47, 60, 232, 262, 600, 735
Cfr10I	RCCGGY	2 cut(s)	230, 260
Cfr13I	GGNCC	4 cut(s)	4, 661, 1268, 1530
Cfr42I	CCGCGG	1 cut(s)	1335
CseI	GACGC	1 cut(s)	188
Csp6I	GTAC	4 cut(s)	268, 464, 950, 965
CviAII	CATG	7 cut(s)	120, 227, 383, 714, 1202, 1351, 1396
CviQI	GTAC	4 cut(s)	268, 464, 950, 965
DdeI	CTNAG	4 cut(s)	160, 213, 888, 1497
DpnI	GATC	4 cut(s)	516, 818, 960, 1305
DpnII	GATC	4 cut(s)	514, 816, 958, 1303
DraI	TTTAAA	1 cut(s)	543
EaeI	YGGCCR	2 cut(s)	919, 1183
Eam1104I	CTCTTC	2 cut(s)	717, 1234
EarI	CTCTTC	2 cut(s)	717, 1234
EciI	GGCGGA	1 cut(s)	1460
Ecl136II	GAGCTC	1 cut(s)	634
Eco130I	CCWWGG	1 cut(s)	83
Eco147I	AGGCCT	1 cut(s)	1343
Eco24I	GRGCYC	2 cut(s)	18, 636
Eco31I	GGTCTC	1 cut(s)	106
Eco47I	GGWCC	2 cut(s)	661, 1268
Eco53kI	GAGCTC	1 cut(s)	634
Eco57I	CTGAAG	1 cut(s)	783
Eco81I	CCTNAGG	1 cut(s)	1497
Eco88I	CYCGRG	2 cut(s)	279, 656
EcoICRI	GAGCTC	1 cut(s)	634
EcoNI	CCTNNNNNAGG	1 cut(s)	43
EcoO109I	RGGNCCY	2 cut(s)	661, 1530
EcoRI	GAATTC	2 cut(s)	471, 1282
EcoRII	CCWGG	2 cut(s)	336, 1270
EcoT14I	CCWWGG	1 cut(s)	83
EcoT22I	ATGCAT	1 cut(s)	1216
EcoT38I	GRGCYC	2 cut(s)	18, 636
ErhI	CCWWGG	1 cut(s)	83
Esp3I	CGTCTC	1 cut(s)	700
FaeI	CATG	7 cut(s)	123, 230, 386, 717, 1205, 1354, 1399
FalI	AAGNNNNNCTT	6 cut(s)	492, 524, 843, 875, 939, 971
FaqI	GGGAC	3 cut(s)	141, 818, 987
FatI	CATG	7 cut(s)	119, 226, 382, 713, 1201, 1350, 1395
FauI	CCCGC	2 cut(s)	43, 180
FbaI	TGATCA	1 cut(s)	816
FblI	GTMKAC	1 cut(s)	1009
Fnu4HI	GCNGC	8 cut(s)	89, 108, 555, 672, 1152, 1230, 1332, 1335
FokI	GGATG	4 cut(s)	353, 731, 848, 882
FriOI	GRGCYC	2 cut(s)	18, 636
Fsp4HI	GCNGC	8 cut(s)	89, 108, 555, 672, 1152, 1230, 1332, 1335
FspBI	CTAG	2 cut(s)	84, 1388
GluI	GCNGC	8 cut(s)	89, 108, 555, 672, 1152, 1230, 1332, 1335
GsaI	CCCAGC	1 cut(s)	1107
HaeIII	GGCC	8 cut(s)	5, 88, 288, 921, 1185, 1343, 1495, 1532
HapII	CCGG	3 cut(s)	231, 261, 468
HgaI	GACGC	1 cut(s)	188
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	7 cut(s)	123, 230, 386, 717, 1205, 1354, 1399
HincII	GTYRAC	1 cut(s)	1087
HindII	GTYRAC	1 cut(s)	1087
HindIII	AAGCTT	1 cut(s)	890
HinfI	GANTC	9 cut(s)	148, 154, 164, 652, 782, 1000, 1040, 1130, 1166
HpaII	CCGG	3 cut(s)	231, 261, 468
HphI	GGTGA	1 cut(s)	1307
Hpy166II	GTNNAC	3 cut(s)	1010, 1087, 1123
Hpy188I	TCNGA	9 cut(s)	95, 153, 163, 169, 490, 700, 763, 1135, 1262
Hpy188III	TCNNGA	9 cut(s)	113, 365, 523, 578, 629, 656, 848, 956, 1388
Hpy8I	GTNNAC	3 cut(s)	1010, 1087, 1123
Hpy99I	CGWCG	2 cut(s)	72, 99
HpyAV	CCTTC	4 cut(s)	332, 698, 909, 918
HpyCH4III	ACNGT	7 cut(s)	68, 406, 620, 741, 882, 1127, 1253
HpyCH4IV	ACGT	5 cut(s)	125, 318, 606, 643, 693
HpyCH4V	TGCA	6 cut(s)	123, 431, 611, 674, 1214, 1249
HpyF10VI	GCNNNNNNNGC	4 cut(s)	55, 453, 608, 1340
HpyF3I	CTNAG	4 cut(s)	160, 213, 888, 1497
HpySE526I	ACGT	5 cut(s)	125, 318, 606, 643, 693
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	7 cut(s)	123, 230, 386, 717, 1205, 1354, 1399
KroI	GCCGGC	2 cut(s)	230, 260
KroNI	GCCGGC	2 cut(s)	232, 262
Ksp22I	TGATCA	1 cut(s)	816
KspI	CCGCGG	1 cut(s)	1335
Kzo9I	GATC	4 cut(s)	514, 816, 958, 1303
LguI	GCTCTTC	1 cut(s)	1234
LmnI	GCTCC	4 cut(s)	96, 631, 940, 1148
Lsp1109I	GCAGC	4 cut(s)	94, 541, 658, 1216
LweI	GCATC	1 cut(s)	658
MaeI	CTAG	2 cut(s)	84, 1388
MaeII	ACGT	5 cut(s)	125, 318, 606, 643, 693
MalI	GATC	4 cut(s)	516, 818, 960, 1305
MbiI	CCGCTC	2 cut(s)	91, 1151
MboI	GATC	4 cut(s)	514, 816, 958, 1303
MhlI	GDGCHC	4 cut(s)	18, 64, 636, 739
MlsI	TGGCCA	1 cut(s)	1185
MluNI	TGGCCA	1 cut(s)	1185
MlyI	GAGTC	5 cut(s)	157, 163, 646, 791, 1009
MmeI	TCCRAC	4 cut(s)	118, 192, 477, 1076
Mox20I	TGGCCA	1 cut(s)	1185
Mph1103I	ATGCAT	1 cut(s)	1216
MroNI	GCCGGC	2 cut(s)	230, 260
MroXI	GAANNNNTTC	1 cut(s)	1452
MscI	TGGCCA	1 cut(s)	1185
MseI	TTAA	3 cut(s)	542, 678, 872
Msp20I	TGGCCA	1 cut(s)	1185
MspA1I	CMGCKG	1 cut(s)	1334
MspI	CCGG	3 cut(s)	231, 261, 468
MspR9I	CCNGG	3 cut(s)	338, 468, 1272
MvaI	CCWGG	2 cut(s)	338, 1272
MvnI	CGCG	1 cut(s)	1334
MwoI	GCNNNNNNNGC	4 cut(s)	55, 453, 608, 1340
NaeI	GCCGGC	2 cut(s)	232, 262
NciI	CCSGG	1 cut(s)	468
NdeII	GATC	4 cut(s)	514, 816, 958, 1303
NgoMIV	GCCGGC	2 cut(s)	230, 260
NlaIII	CATG	7 cut(s)	123, 230, 386, 717, 1205, 1354, 1399
NlaIV	GGNNCC	3 cut(s)	417, 1269, 1449
NsiI	ATGCAT	1 cut(s)	1216
NspI	RCATGY	2 cut(s)	123, 1354
NspV	TTCGAA	1 cut(s)	303
PceI	AGGCCT	1 cut(s)	1343
PciI	ACATGT	1 cut(s)	1350
PciSI	GCTCTTC	1 cut(s)	1234
PdiI	GCCGGC	2 cut(s)	232, 262
PdmI	GAANNNNTTC	1 cut(s)	1452
PfeI	GAWTC	4 cut(s)	164, 1040, 1130, 1166
PfoI	TCCNGGA	1 cut(s)	1270
PkrI	GCNGC	8 cut(s)	90, 109, 556, 673, 1153, 1231, 1333, 1336
PleI	GAGTC	5 cut(s)	156, 162, 646, 790, 1008
PpsI	GAGTC	5 cut(s)	156, 162, 646, 790, 1008
Ppu21I	YACGTR	1 cut(s)	126
PpuMI	RGGWCCY	1 cut(s)	661
PscI	ACATGT	1 cut(s)	1350
PshBI	ATTAAT	1 cut(s)	872
PsiI	TTATAA	1 cut(s)	974
Psp124BI	GAGCTC	1 cut(s)	636
Psp5II	RGGWCCY	1 cut(s)	661
Psp6I	CCWGG	2 cut(s)	336, 1270
PspFI	CCCAGC	1 cut(s)	1103
PspGI	CCWGG	2 cut(s)	336, 1270
PspN4I	GGNNCC	3 cut(s)	417, 1269, 1449
PspPI	GGNCC	4 cut(s)	4, 661, 1268, 1530
PspPPI	RGGWCCY	1 cut(s)	661
RsaI	GTAC	4 cut(s)	269, 465, 951, 966
RsaNI	GTAC	4 cut(s)	268, 464, 950, 965
SacI	GAGCTC	1 cut(s)	636
SacII	CCGCGG	1 cut(s)	1335
SapI	GCTCTTC	1 cut(s)	1234
SaqAI	TTAA	3 cut(s)	542, 678, 872
SatI	GCNGC	8 cut(s)	89, 108, 555, 672, 1152, 1230, 1332, 1335
Sau3AI	GATC	4 cut(s)	514, 816, 958, 1303
Sau96I	GGNCC	4 cut(s)	4, 661, 1268, 1530
SchI	GAGTC	5 cut(s)	157, 163, 646, 791, 1009
ScrFI	CCNGG	3 cut(s)	338, 468, 1272
SduI	GDGCHC	4 cut(s)	18, 64, 636, 739
SfaNI	GCATC	1 cut(s)	658
SfcI	CTRYAG	1 cut(s)	271
Sfr303I	CCGCGG	1 cut(s)	1335
SfuI	TTCGAA	1 cut(s)	303
SgrBI	CCGCGG	1 cut(s)	1335
SinI	GGWCC	2 cut(s)	661, 1268
SmlI	CTYRAG	1 cut(s)	11
SmoI	CTYRAG	1 cut(s)	11
SseBI	AGGCCT	1 cut(s)	1343
SsiI	CCGC	9 cut(s)	36, 89, 173, 410, 997, 1151, 1332, 1334, 1445
SspMI	CTAG	2 cut(s)	84, 1388
SstI	GAGCTC	1 cut(s)	636
StuI	AGGCCT	1 cut(s)	1343
StyD4I	CCNGG	3 cut(s)	336, 466, 1270
StyI	CCWWGG	1 cut(s)	83
TaaI	ACNGT	7 cut(s)	68, 406, 620, 741, 882, 1127, 1253
TaiI	ACGT	5 cut(s)	128, 321, 609, 646, 696
TaqI	TCGA	2 cut(s)	114, 303
TatI	WGTACW	1 cut(s)	949
TauI	GCSGC	4 cut(s)	91, 1154, 1334, 1337
TfiI	GAWTC	4 cut(s)	164, 1040, 1130, 1166
Tru1I	TTAA	3 cut(s)	542, 678, 872
Tru9I	TTAA	3 cut(s)	542, 678, 872
TscAI	CASTG	4 cut(s)	241, 463, 625, 1123
TseI	GCWGC	4 cut(s)	107, 554, 671, 1229
TspDTI	ATGAA	9 cut(s)	13, 399, 438, 654, 702, 717, 735, 884, 1158
TspGWI	ACGGA	1 cut(s)	1337
TspRI	CASTG	4 cut(s)	241, 463, 625, 1123
VpaK11BI	GGWCC	2 cut(s)	661, 1268
VspI	ATTAAT	1 cut(s)	872
XagI	CCTNNNNNAGG	1 cut(s)	43
XapI	RAATTY	5 cut(s)	20, 471, 1095, 1282, 1383
XbaI	TCTAGA	1 cut(s)	1387
XceI	RCATGY	2 cut(s)	123, 1354
XcmI	CCANNNNNNNNNTGG	3 cut(s)	233, 261, 1059
XmaJI	CCTAGG	1 cut(s)	83
XmiI	GTMKAC	1 cut(s)	1009
XmnI	GAANNNNTTC	1 cut(s)	1452
XspI	CTAG	2 cut(s)	84, 1388
Zsp2I	ATGCAT	1 cut(s)	1216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.