Rh7CG135900

G-patch domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
11045047 .. 11048134
3088 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG135900.1

Sequence Viewer

Length: 1269 bp
ATGGAGAGTCCGATTGCCACCGGATTACCCGACTCCCAGAACCCGGAAAATTCCTTCGTCTGGGACGAACAGTCTCAGCTCTACTTTCATGCCAGTACCGGATTCTACCATGACCCCAACGCTGGCTGGTACTACAGCACTCGCGACGGCCTTTATTACAAGTTCGAAGATGGAAACTACGTTCTTCTTCCCTCTCACCAGGGTAATAGTTTGGAAACCAGTCATGGCCAAATGGGTGCCACTGAGAATCCCATCCAAGAAGAGCCCTTTTCAGCTGTAGGCAATACAGAGTGCAGTAGCAGTGATGCACCTGAAAACCACCCTCCTCCCTCGGAATGGCTAGAGGAAACGCTTATTGAACTATATTTGTCTGGTTATTCCAACTTAGAAGCCAATGCTGGTGATCATGATACGGCAGCGTACCCCAAAACATTTGTACCTGATGGGAACAATGATGGTCGCGAGCTCAATGAATCCACGCCGATTCCAGAAGACTATGGTGCTGTAATTGAGTCGAGTGAAAATGTCTCTGATGAAGGTGGTTCATGGGATGAAGAGAACTGGCGAGCTCAGTATGGTCAGGTCGTTCAAGATGCAGAACTGCCAATCCCGGAGTCTTCACTGATAAGTTTATGGGACTGGGAAATGGTCACAAAGCCAAGAAATGATGGAAAATATGAGGTACCAAGGCCAAGGCTTGTTGGGAGGTTAGCAAAGCAGTCTGCTAAGCTTCATCCTTCTCTGCCATCTGGTGGTGGTCTTTTAAAAACTGCTCCAATCTGTGAAGTGCATCTTGACCTGGTACGAGTCACAACAGGACAAGTTTATAAATTGAGGACTCCCAGTAAACAATATTTGGCCTTCATATCAACTTATGATTCTTCGAACCCAACCAAGTATTGGGGCTTCCCAGAATTAGCAGACAACAGAGAAGTCCTTCCGCACCGTAAATCCAGTGTAAGAGTTGATTCCAAAACTGCAGATGTAATGGCATTCAGCAGGGGTTCATCGTCGTTGCCAGACGCAGCACATGAAAAGCTTGAAAGCTATCAATATAGGGATAGAGCTGCCGATAGAAGAGCCTTGCATGGTGGTTTTGGTGTGGGTCCAGGACAGAAGAATTCAGTAGATGGTGATAGTGATCGGCCAACACCCTCCACAGAGGAGGCTGCAGCAGAGGCCTTGAATATGTCATTTGGAGCTGGAAGTTACGCCCGGAAAGTTTTAGAAAGCATGGGCTGGAAGGAGGTACTGTTACTAGTATTCTAG

Protein Analysis

422

Amino Acids

46.66

Weight (kDa)

4.69

Isoelectric Point (pI)

43.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OCRE PF17780 16 - 56 2.6e-08 OCRE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 828
Acc65I GGTACC 1 cut(s) 682
AccB1I GGYRCC 2 cut(s) 236, 682
AccB7I CCANNNNNTGG 2 cut(s) 752, 900
AccII CGCG 2 cut(s) 144, 462
AciI CCGC 1 cut(s) 941
AcoI YGGCCR 2 cut(s) 226, 1145
AcsI RAATTY 2 cut(s) 49, 1120
AfaI GTAC 7 cut(s) 97, 131, 422, 438, 684, 804, 1251
AfiI CCNNNNNNNGG 6 cut(s) 43, 60, 122, 336, 752, 900
AgsI TTSAA 4 cut(s) 359, 590, 1043, 1186
AhdI GACNNNNNGTC 1 cut(s) 70
AhlI ACTAGT 1 cut(s) 1258
AjnI CCWGG 3 cut(s) 198, 798, 1108
AloI GAACNNNNNNTCC 4 cut(s) 165, 197, 591, 623
AluBI AGCT 9 cut(s) 79, 275, 466, 569, 730, 1039, 1047, 1067, 1202
AluI AGCT 9 cut(s) 79, 275, 466, 569, 730, 1039, 1047, 1067, 1202
Alw21I GWGCWC 2 cut(s) 468, 571
Alw26I GTCTC 2 cut(s) 78, 532
AoxI GGCC 6 cut(s) 148, 226, 689, 858, 1145, 1179
ApeKI GCWGC 5 cut(s) 416, 1025, 1067, 1169, 1172
ApoI RAATTY 2 cut(s) 49, 1120
Asp700I GAANNNNTTC 1 cut(s) 936
Asp718I GGTACC 1 cut(s) 682
AspS9I GGNCC 1 cut(s) 1106
AsuC2I CCSGG 3 cut(s) 44, 611, 1216
AsuHPI GGTGA 3 cut(s) 188, 413, 1145
AsuII TTCGAA 2 cut(s) 165, 884
AvaII GGWCC 1 cut(s) 1106
BaeI ACNNNNGTAYC 2 cut(s) 420, 453
BalI TGGCCA 1 cut(s) 228
BanI GGYRCC 2 cut(s) 236, 682
BanII GRGCYC 3 cut(s) 267, 468, 571
BarI GAAGNNNNNNTAC 2 cut(s) 890, 922
BbsI GAAGAC 2 cut(s) 498, 609
Bbv12I GWGCWC 2 cut(s) 468, 571
BbvI GCAGC 5 cut(s) 428, 1037, 1054, 1156, 1184
BccI CCATC 7 cut(s) 164, 260, 437, 449, 662, 754, 1124
BceAI ACGGC 2 cut(s) 163, 429
BciT130I CCWGG 3 cut(s) 200, 800, 1110
BclI TGATCA 1 cut(s) 403
BcnI CCSGG 3 cut(s) 44, 611, 1216
BcoDI GTCTC 2 cut(s) 78, 532
BcuI ACTAGT 1 cut(s) 1258
BfaI CTAG 3 cut(s) 341, 1259, 1267
BfmI CTRYAG 4 cut(s) 133, 276, 978, 1170
BisI GCNGC 5 cut(s) 417, 1026, 1068, 1170, 1173
BlpI GCTNAGC 1 cut(s) 726
BlsI GCNGC 5 cut(s) 418, 1027, 1069, 1171, 1174
Bme1390I CCNGG 6 cut(s) 44, 200, 611, 800, 1110, 1216
Bme18I GGWCC 1 cut(s) 1106
BmeRI GACNNNNNGTC 1 cut(s) 70
BmgT120I GGNCC 1 cut(s) 1106
BmiI GGNNCC 3 cut(s) 238, 684, 1107
BmrFI CCNGG 6 cut(s) 44, 200, 611, 800, 1110, 1216
BmrI ACTGGG 2 cut(s) 649, 837
BmsI GCATC 3 cut(s) 295, 583, 799
BmuI ACTGGG 2 cut(s) 649, 837
BpiI GAAGAC 2 cut(s) 498, 609
Bpu1102I GCTNAGC 1 cut(s) 726
Bpu14I TTCGAA 2 cut(s) 165, 884
BpuMI CCSGG 3 cut(s) 44, 611, 1216
BsaBI GATNNNNATC 1 cut(s) 1140
BsaJI CCNNGG 4 cut(s) 199, 330, 686, 692
BsaWI WCCGGW 2 cut(s) 20, 98
BsaXI ACNNNNNCTCC 2 cut(s) 1238, 1268
Bsc4I CCNNNNNNNGG 6 cut(s) 43, 60, 122, 336, 752, 900
Bse1I ACTGG 6 cut(s) 93, 219, 566, 644, 843, 954
Bse8I GATNNNNATC 1 cut(s) 1140
BseBI CCWGG 3 cut(s) 200, 800, 1110
BseDI CCNNGG 4 cut(s) 199, 330, 686, 692
BseGI GGATG 3 cut(s) 252, 556, 733
BseJI GATNNNNATC 1 cut(s) 1140
BseLI CCNNNNNNNGG 6 cut(s) 43, 60, 122, 336, 752, 900
BseMII CTCAG 3 cut(s) 89, 234, 584
BseNI ACTGG 6 cut(s) 93, 219, 566, 644, 843, 954
BseRI GAGGAG 2 cut(s) 315, 1178
BseXI GCAGC 5 cut(s) 428, 1037, 1054, 1156, 1184
BsgI GTGCAG 1 cut(s) 313
Bsh1236I CGCG 2 cut(s) 144, 462
BshFI GGCC 6 cut(s) 150, 228, 691, 860, 1147, 1181
BshNI GGYRCC 2 cut(s) 236, 682
BsiHKAI GWGCWC 2 cut(s) 468, 571
BsiSI CCGG 5 cut(s) 21, 44, 99, 611, 1216
BslFI GGGAC 2 cut(s) 77, 650
BslI CCNNNNNNNGG 6 cut(s) 43, 60, 122, 336, 752, 900
BsmAI GTCTC 2 cut(s) 78, 532
BsmFI GGGAC 2 cut(s) 77, 650
BsmI GAATGC 1 cut(s) 992
BsnI GGCC 6 cut(s) 150, 228, 691, 860, 1147, 1181
Bsp119I TTCGAA 2 cut(s) 165, 884
Bsp1286I GDGCHC 3 cut(s) 267, 468, 571
Bsp143I GATC 2 cut(s) 403, 1141
Bsp1720I GCTNAGC 1 cut(s) 726
Bsp68I TCGCGA 2 cut(s) 144, 462
BspACI CCGC 1 cut(s) 941
BspANI GGCC 6 cut(s) 150, 228, 691, 860, 1147, 1181
BspCNI CTCAG 3 cut(s) 88, 235, 583
BspFNI CGCG 2 cut(s) 144, 462
BspHI TCATGA 1 cut(s) 406
BspLI GGNNCC 3 cut(s) 238, 684, 1107
BspMAI CTGCAG 2 cut(s) 982, 1174
BspQI GCTCTTC 2 cut(s) 255, 1072
BspT104I TTCGAA 2 cut(s) 165, 884
BspT107I GGYRCC 2 cut(s) 236, 682
BsrI ACTGG 6 cut(s) 93, 219, 566, 644, 843, 954
BssECI CCNNGG 4 cut(s) 199, 330, 686, 692
BssMI GATC 2 cut(s) 403, 1141
BssT1I CCWWGG 2 cut(s) 686, 692
Bst2UI CCWGG 3 cut(s) 200, 800, 1110
Bst4CI ACNGT 3 cut(s) 72, 947, 1254
Bst6I CTCTTC 3 cut(s) 255, 549, 1072
BstBI TTCGAA 2 cut(s) 165, 884
BstC8I GCNNGC 3 cut(s) 124, 464, 567
BstDEI CTNAG 5 cut(s) 75, 243, 385, 570, 726
BstF5I GGATG 3 cut(s) 252, 556, 733
BstFNI CGCG 2 cut(s) 144, 462
BstKTI GATC 2 cut(s) 406, 1144
BstMAI GTCTC 2 cut(s) 78, 532
BstMBI GATC 2 cut(s) 403, 1141
BstMWI GCNNNNNNNGC 1 cut(s) 1178
BstNI CCWGG 3 cut(s) 200, 800, 1110
BstSCI CCNGG 6 cut(s) 42, 198, 609, 798, 1108, 1214
BstSFI CTRYAG 4 cut(s) 133, 276, 978, 1170
BstUI CGCG 2 cut(s) 144, 462
BstV1I GCAGC 5 cut(s) 428, 1037, 1054, 1156, 1184
BstV2I GAAGAC 2 cut(s) 498, 609
BsuRI GGCC 6 cut(s) 150, 228, 691, 860, 1147, 1181
BtsCI GGATG 3 cut(s) 252, 556, 733
BtsI GCAGTG 1 cut(s) 307
BtsIMutI CAGTG 4 cut(s) 240, 307, 620, 961
BtuMI TCGCGA 2 cut(s) 144, 462
Cac8I GCNNGC 3 cut(s) 124, 464, 567
CciI TCATGA 1 cut(s) 406
Cfr13I GGNCC 1 cut(s) 1106
CseI GACGC 1 cut(s) 1031
CsiI ACCWGGT 1 cut(s) 798
Csp6I GTAC 7 cut(s) 96, 130, 421, 437, 683, 803, 1250
CviAII CATG 8 cut(s) 89, 110, 224, 407, 546, 1031, 1088, 1234
CviQI GTAC 7 cut(s) 96, 130, 421, 437, 683, 803, 1250
DdeI CTNAG 5 cut(s) 75, 243, 385, 570, 726
DpnI GATC 2 cut(s) 405, 1143
DpnII GATC 2 cut(s) 403, 1141
DraI TTTAAA 1 cut(s) 765
DriI GACNNNNNGTC 1 cut(s) 70
EaeI YGGCCR 2 cut(s) 226, 1145
Eam1104I CTCTTC 3 cut(s) 255, 549, 1072
Eam1105I GACNNNNNGTC 1 cut(s) 70
EarI CTCTTC 3 cut(s) 255, 549, 1072
Ecl136II GAGCTC 2 cut(s) 466, 569
Eco130I CCWWGG 2 cut(s) 686, 692
Eco147I AGGCCT 1 cut(s) 1181
Eco24I GRGCYC 3 cut(s) 267, 468, 571
Eco47I GGWCC 1 cut(s) 1106
Eco53kI GAGCTC 2 cut(s) 466, 569
EcoICRI GAGCTC 2 cut(s) 466, 569
EcoRI GAATTC 1 cut(s) 1120
EcoRII CCWGG 3 cut(s) 198, 798, 1108
EcoT14I CCWWGG 2 cut(s) 686, 692
EcoT38I GRGCYC 3 cut(s) 267, 468, 571
ErhI CCWWGG 2 cut(s) 686, 692
FaeI CATG 8 cut(s) 92, 113, 227, 410, 549, 1034, 1091, 1237
FalI AAGNNNNNCTT 2 cut(s) 777, 809
FaqI GGGAC 2 cut(s) 77, 650
FatI CATG 8 cut(s) 88, 109, 223, 406, 545, 1030, 1087, 1233
FbaI TGATCA 1 cut(s) 403
Fnu4HI GCNGC 5 cut(s) 417, 1026, 1068, 1170, 1173
FokI GGATG 3 cut(s) 239, 563, 720
FriOI GRGCYC 3 cut(s) 267, 468, 571
Fsp4HI GCNGC 5 cut(s) 417, 1026, 1068, 1170, 1173
FspBI CTAG 3 cut(s) 341, 1259, 1267
GluI GCNGC 5 cut(s) 417, 1026, 1068, 1170, 1173
HaeIII GGCC 6 cut(s) 150, 228, 691, 860, 1147, 1181
HapII CCGG 5 cut(s) 21, 44, 99, 611, 1216
HgaI GACGC 1 cut(s) 1031
Hin1II CATG 8 cut(s) 92, 113, 227, 410, 549, 1034, 1091, 1237
HindIII AAGCTT 2 cut(s) 728, 1037
HpaII CCGG 5 cut(s) 21, 44, 99, 611, 1216
HphI GGTGA 3 cut(s) 188, 413, 1145
Hpy166II GTNNAC 1 cut(s) 848
Hpy188I TCNGA 3 cut(s) 12, 334, 532
Hpy188III TCNNGA 6 cut(s) 143, 407, 461, 488, 590, 794
Hpy8I GTNNAC 1 cut(s) 848
Hpy99I CGWCG 2 cut(s) 149, 1015
HpyAV CCTTC 6 cut(s) 64, 530, 747, 871, 947, 1237
HpyCH4III ACNGT 3 cut(s) 72, 947, 1254
HpyCH4IV ACGT 1 cut(s) 180
HpyCH4V TGCA 7 cut(s) 294, 308, 596, 790, 980, 1087, 1172
HpyF10VI GCNNNNNNNGC 1 cut(s) 1178
HpyF3I CTNAG 5 cut(s) 75, 243, 385, 570, 726
HpySE526I ACGT 1 cut(s) 180
Hsp92II CATG 8 cut(s) 92, 113, 227, 410, 549, 1034, 1091, 1237
KpnI GGTACC 1 cut(s) 686
Ksp22I TGATCA 1 cut(s) 403
Kzo9I GATC 2 cut(s) 403, 1141
LguI GCTCTTC 2 cut(s) 255, 1072
LmnI GCTCC 2 cut(s) 778, 1199
Lsp1109I GCAGC 5 cut(s) 428, 1037, 1054, 1156, 1184
LweI GCATC 3 cut(s) 295, 583, 799
MabI ACCWGGT 1 cut(s) 798
MaeI CTAG 3 cut(s) 341, 1259, 1267
MaeII ACGT 1 cut(s) 180
MaeIII GTNAC 4 cut(s) 649, 808, 1208, 1254
MalI GATC 2 cut(s) 405, 1143
MboI GATC 2 cut(s) 403, 1141
MhlI GDGCHC 3 cut(s) 267, 468, 571
MlsI TGGCCA 1 cut(s) 228
MluCI AATT 5 cut(s) 49, 507, 830, 914, 1120
MluNI TGGCCA 1 cut(s) 228
MlyI GAGTC 6 cut(s) 16, 26, 521, 623, 816, 832
MmeI TCCRAC 1 cut(s) 405
Mox20I TGGCCA 1 cut(s) 228
MroXI GAANNNNTTC 1 cut(s) 936
MscI TGGCCA 1 cut(s) 228
MseI TTAA 1 cut(s) 764
Msp20I TGGCCA 1 cut(s) 228
MspA1I CMGCKG 1 cut(s) 275
MspI CCGG 5 cut(s) 21, 44, 99, 611, 1216
MspR9I CCNGG 6 cut(s) 44, 200, 611, 800, 1110, 1216
Mva1269I GAATGC 1 cut(s) 992
MvaI CCWGG 3 cut(s) 200, 800, 1110
MvnI CGCG 2 cut(s) 144, 462
MwoI GCNNNNNNNGC 1 cut(s) 1178
NciI CCSGG 3 cut(s) 44, 611, 1216
NdeII GATC 2 cut(s) 403, 1141
NlaIII CATG 8 cut(s) 92, 113, 227, 410, 549, 1034, 1091, 1237
NlaIV GGNNCC 3 cut(s) 238, 684, 1107
NmuCI GTSAC 2 cut(s) 649, 808
NruI TCGCGA 2 cut(s) 144, 462
NspV TTCGAA 2 cut(s) 165, 884
PagI TCATGA 1 cut(s) 406
PceI AGGCCT 1 cut(s) 1181
PciSI GCTCTTC 2 cut(s) 255, 1072
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 1 cut(s) 992
PdmI GAANNNNTTC 1 cut(s) 936
PfeI GAWTC 6 cut(s) 102, 247, 473, 484, 878, 968
PflMI CCANNNNNTGG 2 cut(s) 752, 900
PfoI TCCNGGA 2 cut(s) 609, 1108
PkrI GCNGC 5 cut(s) 418, 1027, 1069, 1171, 1174
PleI GAGTC 6 cut(s) 15, 26, 520, 622, 815, 832
PpsI GAGTC 6 cut(s) 15, 26, 520, 622, 815, 832
PsiI TTATAA 1 cut(s) 828
Psp124BI GAGCTC 2 cut(s) 468, 571
Psp6I CCWGG 3 cut(s) 198, 798, 1108
PspGI CCWGG 3 cut(s) 198, 798, 1108
PspN4I GGNNCC 3 cut(s) 238, 684, 1107
PspPI GGNCC 1 cut(s) 1106
PstI CTGCAG 2 cut(s) 982, 1174
PvuII CAGCTG 1 cut(s) 275
RruI TCGCGA 2 cut(s) 144, 462
RsaI GTAC 7 cut(s) 97, 131, 422, 438, 684, 804, 1251
RsaNI GTAC 7 cut(s) 96, 130, 421, 437, 683, 803, 1250
SacI GAGCTC 2 cut(s) 468, 571
SapI GCTCTTC 2 cut(s) 255, 1072
SaqAI TTAA 1 cut(s) 764
SatI GCNGC 5 cut(s) 417, 1026, 1068, 1170, 1173
Sau3AI GATC 2 cut(s) 403, 1141
Sau96I GGNCC 1 cut(s) 1106
SchI GAGTC 6 cut(s) 16, 26, 521, 623, 816, 832
ScrFI CCNGG 6 cut(s) 44, 200, 611, 800, 1110, 1216
SduI GDGCHC 3 cut(s) 267, 468, 571
SexAI ACCWGGT 1 cut(s) 798
SfaNI GCATC 3 cut(s) 295, 583, 799
SfcI CTRYAG 4 cut(s) 133, 276, 978, 1170
SfuI TTCGAA 2 cut(s) 165, 884
SinI GGWCC 1 cut(s) 1106
SpeI ACTAGT 1 cut(s) 1258
Sse9I AATT 5 cut(s) 49, 507, 830, 914, 1120
SseBI AGGCCT 1 cut(s) 1181
SsiI CCGC 1 cut(s) 941
SspI AATATT 1 cut(s) 854
SspMI CTAG 3 cut(s) 341, 1259, 1267
SstI GAGCTC 2 cut(s) 468, 571
StuI AGGCCT 1 cut(s) 1181
StyD4I CCNGG 6 cut(s) 42, 198, 609, 798, 1108, 1214
StyI CCWWGG 2 cut(s) 686, 692
TaaI ACNGT 3 cut(s) 72, 947, 1254
TaiI ACGT 1 cut(s) 183
TaqI TCGA 3 cut(s) 165, 515, 884
TasI AATT 5 cut(s) 49, 507, 830, 914, 1120
TfiI GAWTC 6 cut(s) 102, 247, 473, 484, 878, 968
Tru1I TTAA 1 cut(s) 764
Tru9I TTAA 1 cut(s) 764
TscAI CASTG 4 cut(s) 247, 307, 627, 961
TseFI GTSAC 2 cut(s) 649, 808
TseI GCWGC 5 cut(s) 416, 1025, 1067, 1169, 1172
Tsp45I GTSAC 2 cut(s) 649, 808
TspDTI ATGAA 9 cut(s) 77, 486, 534, 549, 567, 722, 853, 996, 1047
TspRI CASTG 4 cut(s) 247, 307, 627, 961
Van91I CCANNNNNTGG 2 cut(s) 752, 900
VpaK11BI GGWCC 1 cut(s) 1106
XapI RAATTY 2 cut(s) 49, 1120
XcmI CCANNNNNNNNNTGG 1 cut(s) 897
XmnI GAANNNNTTC 1 cut(s) 936
XspI CTAG 3 cut(s) 341, 1259, 1267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.