Rh7BG132700

G-patch domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
9887612 .. 9890677
3066 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG132700.1

Sequence Viewer

Length: 1275 bp
ATGAAAATGGAGAGTCCGATTGCCACCGGATTAGCCGACTCCCAGAACCCGGAAAATTCCTTCGTCTGGGACGAACAGTCTCAGCTCTACTTTCATGCCAGTACCGGATTCTACCATGACCCCAACGCCGGCTGGTACTACAGCACTCGCGACGGCCTTTATTACAAGTTCGAAGATGGAAACTACGTTCTTCTTCCCTCTCACCAGGGTAATAGTTTGGAAACCAGTCATGGCCAAATGGGTGCCACTGAGAATCCCATTCAAGAAGAGCCCTTTTCAGCTGTAGGCAATACAGAGTGCAGTAGCAGTGATGCACCTGAAAACCACCCTCCTCCCTCGGAATGGCTAGAGGATACGCTTATTGAACTATATTTGTCTGGTTATTCCAACTTAGAAGCCAATGCTGGTGATCATGATATGGCAGTGTACCCCGAAACATTTGTACCTGATGGGAACAATGATGGTCACGAGCTCAATGAATCCACGCCGATTCCAGAAGACTATGGTGCTGTAATTGAGTCGAGTGAAAATGTCTCTGATGAAGGTGGTTCATGGGATGAAGAGAACTGGCGAGCTCAGTATGGTCAGGTCGTTCAAGATGCAGAAGTGCCAATCCCGGAGTCTTCACTGATAAGTTTATGGGACTGGGAAATGGTCACAAAGCCAAGAAATGATGGAAAATGTGAGGTACCAAGGCCAAGGCTTGTTGGGAGGTTAGCGAAGCAGTCTGCTAAGCTTCATCCTTCTCTGCCGTCTGGTGGTGGTCTTTTAAAAACTGCTCCAATCTGTGAAGTGCATCTTGACCTGGTACGAGTCACAACAGGACAAGTTTATAAATTGAGGACTCCCAGTAAACAATATTTGGCCTCCTTATCAACTTATGATTCTTCGAACCCAACCAAGGATTGGGGCTTCCCAGAATTATCAGACAACAGAGAAGTCCTTCCTCACCCTAAATCCAGCGTAAGAGGTGATTCCAAAACTGCGGATGTAATGGCATTCAGCAGGGGTTCATCGTCGTTGCCAGACGCAGCACATGAAAAGCTTGAAAGCTATCAATATAGGGATAGAGCTGCTGATAGAAGAGCCTTGTATGGTGGTTTTGGTGTGGGTCCAGGACAGAAGAATTCAGTAGATGGTGATAGTGATCGGCCAACACTCTCCACAGAGGAGGCTGCAGCAGAGGCCTTGAATATGTCATTTGGAGCTGGAAGTTACGCCCGGAAAGTTTTAGAAAGCATGGGCTGGAAGGAGGTACTGTTACTAGTATTCTAG

Protein Analysis

424

Amino Acids

46.69

Weight (kDa)

4.58

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OCRE PF17780 18 - 58 2.6e-08 OCRE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 834
Acc65I GGTACC 1 cut(s) 688
AccB1I GGYRCC 2 cut(s) 242, 688
AccB7I CCANNNNNTGG 1 cut(s) 906
AccII CGCG 1 cut(s) 150
AciI CCGC 1 cut(s) 986
AcoI YGGCCR 2 cut(s) 232, 1151
AcsI RAATTY 2 cut(s) 55, 1126
AfaI GTAC 7 cut(s) 103, 137, 428, 444, 690, 810, 1257
AfiI CCNNNNNNNGG 7 cut(s) 49, 66, 128, 342, 758, 901, 906
AgsI TTSAA 5 cut(s) 263, 365, 596, 1049, 1192
AhdI GACNNNNNGTC 1 cut(s) 76
AhlI ACTAGT 1 cut(s) 1264
AjnI CCWGG 3 cut(s) 204, 804, 1114
AloI GAACNNNNNNTCC 2 cut(s) 171, 203
AluBI AGCT 9 cut(s) 85, 281, 472, 575, 736, 1045, 1053, 1073, 1208
AluI AGCT 9 cut(s) 85, 281, 472, 575, 736, 1045, 1053, 1073, 1208
Alw21I GWGCWC 2 cut(s) 474, 577
Alw26I GTCTC 2 cut(s) 84, 538
AoxI GGCC 6 cut(s) 154, 232, 695, 864, 1151, 1185
ApeKI GCWGC 4 cut(s) 1031, 1073, 1175, 1178
ApoI RAATTY 2 cut(s) 55, 1126
Asp700I GAANNNNTTC 1 cut(s) 942
Asp718I GGTACC 1 cut(s) 688
AspS9I GGNCC 1 cut(s) 1112
AsuC2I CCSGG 3 cut(s) 50, 617, 1222
AsuHPI GGTGA 5 cut(s) 194, 419, 941, 983, 1151
AsuII TTCGAA 2 cut(s) 171, 890
AvaII GGWCC 1 cut(s) 1112
BaeI ACNNNNGTAYC 2 cut(s) 426, 459
BalI TGGCCA 1 cut(s) 234
BanI GGYRCC 2 cut(s) 242, 688
BanII GRGCYC 3 cut(s) 273, 474, 577
BauI CACGAG 1 cut(s) 467
BbsI GAAGAC 2 cut(s) 504, 615
Bbv12I GWGCWC 2 cut(s) 474, 577
BbvI GCAGC 4 cut(s) 1043, 1060, 1162, 1190
BccI CCATC 5 cut(s) 170, 443, 455, 668, 1130
BceAI ACGGC 2 cut(s) 169, 736
BciT130I CCWGG 3 cut(s) 206, 806, 1116
BciVI GTATCC 1 cut(s) 346
BclI TGATCA 1 cut(s) 409
BcnI CCSGG 3 cut(s) 50, 617, 1222
BcoDI GTCTC 2 cut(s) 84, 538
BcuI ACTAGT 1 cut(s) 1264
BfaI CTAG 3 cut(s) 347, 1265, 1273
BfmI CTRYAG 3 cut(s) 139, 282, 1176
BfuI GTATCC 1 cut(s) 346
BisI GCNGC 4 cut(s) 1032, 1074, 1176, 1179
BlpI GCTNAGC 1 cut(s) 732
BlsI GCNGC 4 cut(s) 1033, 1075, 1177, 1180
Bme1390I CCNGG 6 cut(s) 50, 206, 617, 806, 1116, 1222
Bme18I GGWCC 1 cut(s) 1112
BmeRI GACNNNNNGTC 1 cut(s) 76
BmgT120I GGNCC 1 cut(s) 1112
BmiI GGNNCC 3 cut(s) 244, 690, 1113
BmrFI CCNGG 6 cut(s) 50, 206, 617, 806, 1116, 1222
BmrI ACTGGG 2 cut(s) 655, 843
BmsI GCATC 3 cut(s) 301, 589, 805
BmuI ACTGGG 2 cut(s) 655, 843
BpiI GAAGAC 2 cut(s) 504, 615
Bpu1102I GCTNAGC 1 cut(s) 732
Bpu14I TTCGAA 2 cut(s) 171, 890
BpuMI CCSGG 3 cut(s) 50, 617, 1222
BsaBI GATNNNNATC 1 cut(s) 1146
BsaJI CCNNGG 5 cut(s) 205, 336, 692, 698, 900
BsaWI WCCGGW 2 cut(s) 26, 104
BsaXI ACNNNNNCTCC 2 cut(s) 1244, 1274
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 66, 128, 342, 758, 901, 906
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 5 cut(s) 99, 225, 572, 650, 849
Bse8I GATNNNNATC 1 cut(s) 1146
BseBI CCWGG 3 cut(s) 206, 806, 1116
BseDI CCNNGG 5 cut(s) 205, 336, 692, 698, 900
BseGI GGATG 3 cut(s) 562, 739, 994
BseJI GATNNNNATC 1 cut(s) 1146
BseLI CCNNNNNNNGG 7 cut(s) 49, 66, 128, 342, 758, 901, 906
BseMII CTCAG 3 cut(s) 95, 240, 590
BseNI ACTGG 5 cut(s) 99, 225, 572, 650, 849
BseRI GAGGAG 2 cut(s) 321, 1184
BseXI GCAGC 4 cut(s) 1043, 1060, 1162, 1190
BsgI GTGCAG 1 cut(s) 319
Bsh1236I CGCG 1 cut(s) 150
BshFI GGCC 6 cut(s) 156, 234, 697, 866, 1153, 1187
BshNI GGYRCC 2 cut(s) 242, 688
BsiHKAI GWGCWC 2 cut(s) 474, 577
BsiSI CCGG 6 cut(s) 27, 50, 105, 129, 617, 1222
BslFI GGGAC 2 cut(s) 83, 656
BslI CCNNNNNNNGG 7 cut(s) 49, 66, 128, 342, 758, 901, 906
BsmAI GTCTC 2 cut(s) 84, 538
BsmFI GGGAC 2 cut(s) 83, 656
BsmI GAATGC 1 cut(s) 998
BsnI GGCC 6 cut(s) 156, 234, 697, 866, 1153, 1187
Bsp119I TTCGAA 2 cut(s) 171, 890
Bsp1286I GDGCHC 3 cut(s) 273, 474, 577
Bsp143I GATC 2 cut(s) 409, 1147
Bsp1720I GCTNAGC 1 cut(s) 732
Bsp68I TCGCGA 1 cut(s) 150
BspACI CCGC 1 cut(s) 986
BspANI GGCC 6 cut(s) 156, 234, 697, 866, 1153, 1187
BspCNI CTCAG 3 cut(s) 94, 241, 589
BspFNI CGCG 1 cut(s) 150
BspHI TCATGA 1 cut(s) 412
BspLI GGNNCC 3 cut(s) 244, 690, 1113
BspMAI CTGCAG 1 cut(s) 1180
BspQI GCTCTTC 2 cut(s) 261, 1078
BspT104I TTCGAA 2 cut(s) 171, 890
BspT107I GGYRCC 2 cut(s) 242, 688
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 5 cut(s) 99, 225, 572, 650, 849
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 5 cut(s) 205, 336, 692, 698, 900
BssMI GATC 2 cut(s) 409, 1147
BssSI CACGAG 1 cut(s) 467
BssT1I CCWWGG 3 cut(s) 692, 698, 900
Bst2BI CACGAG 1 cut(s) 467
Bst2UI CCWGG 3 cut(s) 206, 806, 1116
Bst4CI ACNGT 2 cut(s) 78, 1260
Bst6I CTCTTC 3 cut(s) 261, 555, 1078
BstBI TTCGAA 2 cut(s) 171, 890
BstC8I GCNNGC 2 cut(s) 130, 573
BstDEI CTNAG 5 cut(s) 81, 249, 391, 576, 732
BstF5I GGATG 3 cut(s) 562, 739, 994
BstFNI CGCG 1 cut(s) 150
BstKTI GATC 2 cut(s) 412, 1150
BstMAI GTCTC 2 cut(s) 84, 538
BstMBI GATC 2 cut(s) 409, 1147
BstMWI GCNNNNNNNGC 1 cut(s) 1184
BstNI CCWGG 3 cut(s) 206, 806, 1116
BstSCI CCNGG 6 cut(s) 48, 204, 615, 804, 1114, 1220
BstSFI CTRYAG 3 cut(s) 139, 282, 1176
BstUI CGCG 1 cut(s) 150
BstV1I GCAGC 4 cut(s) 1043, 1060, 1162, 1190
BstV2I GAAGAC 2 cut(s) 504, 615
BsuI GTATCC 1 cut(s) 346
BsuRI GGCC 6 cut(s) 156, 234, 697, 866, 1153, 1187
BtsCI GGATG 3 cut(s) 562, 739, 994
BtsI GCAGTG 2 cut(s) 313, 429
BtsIMutI CAGTG 4 cut(s) 246, 313, 429, 626
BtuMI TCGCGA 1 cut(s) 150
Cac8I GCNNGC 2 cut(s) 130, 573
CciI TCATGA 1 cut(s) 412
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 1 cut(s) 1112
CseI GACGC 1 cut(s) 1037
CsiI ACCWGGT 1 cut(s) 804
Csp6I GTAC 7 cut(s) 102, 136, 427, 443, 689, 809, 1256
CviAII CATG 7 cut(s) 95, 116, 230, 413, 552, 1037, 1240
CviQI GTAC 7 cut(s) 102, 136, 427, 443, 689, 809, 1256
DdeI CTNAG 5 cut(s) 81, 249, 391, 576, 732
DpnI GATC 2 cut(s) 411, 1149
DpnII GATC 2 cut(s) 409, 1147
DraI TTTAAA 1 cut(s) 771
DriI GACNNNNNGTC 1 cut(s) 76
EaeI YGGCCR 2 cut(s) 232, 1151
Eam1104I CTCTTC 3 cut(s) 261, 555, 1078
Eam1105I GACNNNNNGTC 1 cut(s) 76
EarI CTCTTC 3 cut(s) 261, 555, 1078
Ecl136II GAGCTC 2 cut(s) 472, 575
Eco130I CCWWGG 3 cut(s) 692, 698, 900
Eco147I AGGCCT 1 cut(s) 1187
Eco24I GRGCYC 3 cut(s) 273, 474, 577
Eco47I GGWCC 1 cut(s) 1112
Eco53kI GAGCTC 2 cut(s) 472, 575
EcoICRI GAGCTC 2 cut(s) 472, 575
EcoRI GAATTC 1 cut(s) 1126
EcoRII CCWGG 3 cut(s) 204, 804, 1114
EcoT14I CCWWGG 3 cut(s) 692, 698, 900
EcoT38I GRGCYC 3 cut(s) 273, 474, 577
ErhI CCWWGG 3 cut(s) 692, 698, 900
FaeI CATG 7 cut(s) 98, 119, 233, 416, 555, 1040, 1243
FalI AAGNNNNNCTT 2 cut(s) 783, 815
FaqI GGGAC 2 cut(s) 83, 656
FatI CATG 7 cut(s) 94, 115, 229, 412, 551, 1036, 1239
FbaI TGATCA 1 cut(s) 409
Fnu4HI GCNGC 4 cut(s) 1032, 1074, 1176, 1179
FokI GGATG 3 cut(s) 569, 726, 1001
FriOI GRGCYC 3 cut(s) 273, 474, 577
Fsp4HI GCNGC 4 cut(s) 1032, 1074, 1176, 1179
FspBI CTAG 3 cut(s) 347, 1265, 1273
GluI GCNGC 4 cut(s) 1032, 1074, 1176, 1179
HaeIII GGCC 6 cut(s) 156, 234, 697, 866, 1153, 1187
HapII CCGG 6 cut(s) 27, 50, 105, 129, 617, 1222
HgaI GACGC 1 cut(s) 1037
Hin1II CATG 7 cut(s) 98, 119, 233, 416, 555, 1040, 1243
HindIII AAGCTT 2 cut(s) 734, 1043
HpaII CCGG 6 cut(s) 27, 50, 105, 129, 617, 1222
HphI GGTGA 5 cut(s) 194, 419, 941, 983, 1151
Hpy166II GTNNAC 2 cut(s) 427, 854
Hpy188I TCNGA 4 cut(s) 18, 340, 538, 928
Hpy188III TCNNGA 7 cut(s) 149, 263, 413, 467, 494, 596, 800
Hpy8I GTNNAC 2 cut(s) 427, 854
Hpy99I CGWCG 2 cut(s) 155, 1021
HpyAV CCTTC 5 cut(s) 70, 536, 753, 953, 1243
HpyCH4III ACNGT 2 cut(s) 78, 1260
HpyCH4IV ACGT 1 cut(s) 186
HpyCH4V TGCA 5 cut(s) 300, 314, 602, 796, 1178
HpyF10VI GCNNNNNNNGC 1 cut(s) 1184
HpyF3I CTNAG 5 cut(s) 81, 249, 391, 576, 732
HpySE526I ACGT 1 cut(s) 186
Hsp92II CATG 7 cut(s) 98, 119, 233, 416, 555, 1040, 1243
KpnI GGTACC 1 cut(s) 692
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
Ksp22I TGATCA 1 cut(s) 409
Kzo9I GATC 2 cut(s) 409, 1147
LguI GCTCTTC 2 cut(s) 261, 1078
LmnI GCTCC 2 cut(s) 784, 1205
Lsp1109I GCAGC 4 cut(s) 1043, 1060, 1162, 1190
LweI GCATC 3 cut(s) 301, 589, 805
MabI ACCWGGT 1 cut(s) 804
MaeI CTAG 3 cut(s) 347, 1265, 1273
MaeII ACGT 1 cut(s) 186
MaeIII GTNAC 5 cut(s) 464, 655, 814, 1214, 1260
MalI GATC 2 cut(s) 411, 1149
MboI GATC 2 cut(s) 409, 1147
MhlI GDGCHC 3 cut(s) 273, 474, 577
MlsI TGGCCA 1 cut(s) 234
MluCI AATT 5 cut(s) 55, 513, 836, 920, 1126
MluNI TGGCCA 1 cut(s) 234
MlyI GAGTC 6 cut(s) 22, 32, 527, 629, 822, 838
MmeI TCCRAC 1 cut(s) 411
Mox20I TGGCCA 1 cut(s) 234
MroNI GCCGGC 1 cut(s) 128
MroXI GAANNNNTTC 1 cut(s) 942
MscI TGGCCA 1 cut(s) 234
MseI TTAA 1 cut(s) 770
Msp20I TGGCCA 1 cut(s) 234
MspA1I CMGCKG 1 cut(s) 281
MspI CCGG 6 cut(s) 27, 50, 105, 129, 617, 1222
MspR9I CCNGG 6 cut(s) 50, 206, 617, 806, 1116, 1222
Mva1269I GAATGC 1 cut(s) 998
MvaI CCWGG 3 cut(s) 206, 806, 1116
MvnI CGCG 1 cut(s) 150
MwoI GCNNNNNNNGC 1 cut(s) 1184
NaeI GCCGGC 1 cut(s) 130
NciI CCSGG 3 cut(s) 50, 617, 1222
NdeII GATC 2 cut(s) 409, 1147
NgoMIV GCCGGC 1 cut(s) 128
NlaIII CATG 7 cut(s) 98, 119, 233, 416, 555, 1040, 1243
NlaIV GGNNCC 3 cut(s) 244, 690, 1113
NmuCI GTSAC 3 cut(s) 464, 655, 814
NruI TCGCGA 1 cut(s) 150
NspV TTCGAA 2 cut(s) 171, 890
PagI TCATGA 1 cut(s) 412
PceI AGGCCT 1 cut(s) 1187
PciSI GCTCTTC 2 cut(s) 261, 1078
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PctI GAATGC 1 cut(s) 998
PdiI GCCGGC 1 cut(s) 130
PdmI GAANNNNTTC 1 cut(s) 942
PfeI GAWTC 6 cut(s) 108, 253, 479, 490, 884, 974
PflMI CCANNNNNTGG 1 cut(s) 906
PfoI TCCNGGA 2 cut(s) 615, 1114
PkrI GCNGC 4 cut(s) 1033, 1075, 1177, 1180
PleI GAGTC 6 cut(s) 21, 32, 526, 628, 821, 838
PpsI GAGTC 6 cut(s) 21, 32, 526, 628, 821, 838
PsiI TTATAA 1 cut(s) 834
Psp124BI GAGCTC 2 cut(s) 474, 577
Psp6I CCWGG 3 cut(s) 204, 804, 1114
PspGI CCWGG 3 cut(s) 204, 804, 1114
PspN4I GGNNCC 3 cut(s) 244, 690, 1113
PspPI GGNCC 1 cut(s) 1112
PstI CTGCAG 1 cut(s) 1180
PvuII CAGCTG 1 cut(s) 281
RruI TCGCGA 1 cut(s) 150
RsaI GTAC 7 cut(s) 103, 137, 428, 444, 690, 810, 1257
RsaNI GTAC 7 cut(s) 102, 136, 427, 443, 689, 809, 1256
SacI GAGCTC 2 cut(s) 474, 577
SapI GCTCTTC 2 cut(s) 261, 1078
SaqAI TTAA 1 cut(s) 770
SatI GCNGC 4 cut(s) 1032, 1074, 1176, 1179
Sau3AI GATC 2 cut(s) 409, 1147
Sau96I GGNCC 1 cut(s) 1112
SchI GAGTC 6 cut(s) 22, 32, 527, 629, 822, 838
ScrFI CCNGG 6 cut(s) 50, 206, 617, 806, 1116, 1222
SduI GDGCHC 3 cut(s) 273, 474, 577
SexAI ACCWGGT 1 cut(s) 804
SfaNI GCATC 3 cut(s) 301, 589, 805
SfcI CTRYAG 3 cut(s) 139, 282, 1176
SfuI TTCGAA 2 cut(s) 171, 890
SinI GGWCC 1 cut(s) 1112
SpeI ACTAGT 1 cut(s) 1264
Sse9I AATT 5 cut(s) 55, 513, 836, 920, 1126
SseBI AGGCCT 1 cut(s) 1187
SsiI CCGC 1 cut(s) 986
SspI AATATT 1 cut(s) 860
SspMI CTAG 3 cut(s) 347, 1265, 1273
SstI GAGCTC 2 cut(s) 474, 577
StuI AGGCCT 1 cut(s) 1187
StyD4I CCNGG 6 cut(s) 48, 204, 615, 804, 1114, 1220
StyI CCWWGG 3 cut(s) 692, 698, 900
TaaI ACNGT 2 cut(s) 78, 1260
TaiI ACGT 1 cut(s) 189
TaqI TCGA 3 cut(s) 171, 521, 890
TasI AATT 5 cut(s) 55, 513, 836, 920, 1126
TfiI GAWTC 6 cut(s) 108, 253, 479, 490, 884, 974
Tru1I TTAA 1 cut(s) 770
Tru9I TTAA 1 cut(s) 770
TscAI CASTG 4 cut(s) 253, 313, 429, 633
TseFI GTSAC 3 cut(s) 464, 655, 814
TseI GCWGC 4 cut(s) 1031, 1073, 1175, 1178
Tsp45I GTSAC 3 cut(s) 464, 655, 814
TspDTI ATGAA 9 cut(s) 17, 83, 492, 540, 555, 573, 728, 1002, 1053
TspRI CASTG 4 cut(s) 253, 313, 429, 633
Van91I CCANNNNNTGG 1 cut(s) 906
VpaK11BI GGWCC 1 cut(s) 1112
XapI RAATTY 2 cut(s) 55, 1126
XcmI CCANNNNNNNNNTGG 1 cut(s) 903
XmnI GAANNNNTTC 1 cut(s) 942
XspI CTAG 3 cut(s) 347, 1265, 1273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.