Prupe.5G169300_v2.0.a1

G-patch domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
14535626 .. 14539301
3676 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G169300.3

Sequence Viewer

Length: 1401 bp
ATGGAGGGTCCGAGTCCTAGTGCCACAGAACCCGGTTCCCAAGACTCCCACAACGCCTTTGTTTGGGACGAAAGCTCTCAGCTTTATTTCCATGCCGGTAGCGGATTTTACCATGACCCGAACGCTGGTTGGTACTATAGCACTCGGGATGGTCTTTACTACAAATTCGAAGATGGAAACTACGTGCTTCTTCCCTCTCATCAGGCTGATAATTTGGAAACATGTGAAACCCAAGTGACTGCTCCCATTCAAAGAGAGCTTTTTGCACATGAAAGTGAATGCATAGAAATTGTTCCTCAGGAACCGATTGGAATTTCAGGCACCACAGAGTGCTGCAGTAGCAGTGATGTACCTGAAAATCCCCCTCCCACCTCAGAATGGTTAGAAGATACGCTTATTGATCTTTATTTGTCTGGTTATTCCAACTTAGAAGCCAATGCTGCTGATGATATGACAGTCTTTCCCGAAACAGATGTTGAGTTTGGATCCAATGGGAACAAAGATAGTCACGAGCTCAATGAAGGTGAATTGATTCTGGATGACCATGATGCTGCAATTAAATCAAGTGAAAATGTTTCTGATGAAGGTGTTTCATTGGATGAAGAGAACTGGCGAGCTCAATATGGTCAGGTCATTCAATCTGAAGAAGTTTCAATCCCAGAGTCCTCGCCTGTAAGTTTATGGGACTGGGAAATGATCACAAAGCCCAGAAAGGATGGAAAAGGTGAGGTAGCAAGGCTTGTCGGGAGATTAGTGAGGCGGTCTGCTAAGCTTCATCCATCTATGCCTTCTGGTGGTGGTCTTCTAAAAACTGCTCCAATATGTGAAGTACATCTTGATCTGGTACGAGTTATAACAGGACAAGTCTATAAGTTGCGGAGCCCCAGTATACGATACTTATCTTCCTTGTCAACTTATGATTCTTCCAACCCAACCAAAGATTGGGGCTTCCCTGAATTATCAGTCAACACACAAATTCTGGCCCTCTCTAAATCCAGTGGAAACAGTGAATCAATAACTGCAGATGGAGTGGCAGTTAGCAAGGATTCATCTTTGTTGCCAGGCCAAATATATGAAAAGCATGAAAGCTATACATATAGGGATAGAGCTGCTGATAGAAGAGCCTTGCACGGTGGTTTCGGTGTGGGTCCAGGACAAAAGAATTCACTAATTGGTGATAGTGATTCGCCACCAGGCTCTACAGAAGAAGCTGCAGCAGAGGCCTTGAACATGTCATTTGGAGTTGGTAGTTATGCCAGAAAACTTTTAGAAAACATGGGCTGGAAGGAGGGAGAGGCACTTGGCAAAAGTACAAAGGGATTAGTTGAACCTATTCAAGCACACAGCAACATTGGTAATGCTGGATTAGGGTGGCCTCAGGGAAGATTTAAGCGTCCCTGA

Protein Analysis

467

Amino Acids

50.8

Weight (kDa)

4.64

Isoelectric Point (pI)

49.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 854
AccB1I GGYRCC 1 cut(s) 320
AccB7I CCANNNNNTGG 1 cut(s) 942
AccI GTMKAC 1 cut(s) 889
AciI CCGC 3 cut(s) 102, 760, 877
AclWI GGATC 2 cut(s) 480, 493
AcsI RAATTY 4 cut(s) 164, 312, 975, 1162
AcuI CTGAAG 1 cut(s) 663
AdeI CACNNNGTG 1 cut(s) 330
AfaI GTAC 5 cut(s) 134, 351, 831, 846, 1312
AfiI CCNNNNNNNGG 5 cut(s) 63, 125, 378, 794, 942
AflIII ACRYGT 2 cut(s) 221, 1230
AgsI TTSAA 6 cut(s) 251, 638, 654, 1228, 1328, 1337
AjnI CCWGG 3 cut(s) 1060, 1150, 1192
AluBI AGCT 9 cut(s) 75, 82, 259, 514, 617, 772, 1089, 1109, 1211
AluI AGCT 9 cut(s) 75, 82, 259, 514, 617, 772, 1089, 1109, 1211
Alw21I GWGCWC 2 cut(s) 516, 619
AlwI GGATC 2 cut(s) 480, 493
Ama87I CYCGRG 1 cut(s) 144
AoxI GGCC 4 cut(s) 981, 1063, 1221, 1373
ApeKI GCWGC 6 cut(s) 333, 440, 551, 1109, 1211, 1214
ApoI RAATTY 4 cut(s) 164, 312, 975, 1162
Asp700I GAANNNNTTC 3 cut(s) 291, 531, 1332
AspS9I GGNCC 3 cut(s) 8, 982, 1148
AsuC2I CCSGG 1 cut(s) 33
AsuHPI GGTGA 3 cut(s) 536, 737, 1187
AsuII TTCGAA 1 cut(s) 168
AvaI CYCGRG 1 cut(s) 144
AvaII GGWCC 2 cut(s) 8, 1148
AxyI CCTNAGG 2 cut(s) 297, 1377
BamHI GGATCC 1 cut(s) 485
BanI GGYRCC 1 cut(s) 320
BanII GRGCYC 3 cut(s) 516, 619, 884
BauI CACGAG 1 cut(s) 509
BbsI GAAGAC 1 cut(s) 794
Bbv12I GWGCWC 2 cut(s) 516, 619
BbvI GCAGC 6 cut(s) 320, 427, 538, 1096, 1198, 1226
BccI CCATC 5 cut(s) 143, 167, 710, 787, 1019
BciT130I CCWGG 3 cut(s) 1062, 1152, 1194
BclI TGATCA 1 cut(s) 696
BcnI CCSGG 1 cut(s) 33
BfaI CTAG 1 cut(s) 18
BfmI CTRYAG 5 cut(s) 136, 334, 1020, 1200, 1212
BisI GCNGC 6 cut(s) 334, 441, 552, 1110, 1212, 1215
BlpI GCTNAGC 1 cut(s) 768
BlsI GCNGC 6 cut(s) 335, 442, 553, 1111, 1213, 1216
Bme1390I CCNGG 4 cut(s) 33, 1062, 1152, 1194
Bme18I GGWCC 2 cut(s) 8, 1148
BmeT110I CYCGRG 1 cut(s) 144
BmgT120I GGNCC 3 cut(s) 8, 982, 1148
BmiI GGNNCC 7 cut(s) 9, 37, 303, 322, 487, 881, 1149
BmrFI CCNGG 4 cut(s) 33, 1062, 1152, 1194
BmrI ACTGGG 2 cut(s) 697, 879
BmsI GCATC 1 cut(s) 538
BmuI ACTGGG 2 cut(s) 697, 879
BpiI GAAGAC 1 cut(s) 794
Bpu1102I GCTNAGC 1 cut(s) 768
Bpu14I TTCGAA 1 cut(s) 168
BpuMI CCSGG 1 cut(s) 33
BsaAI YACGTR 1 cut(s) 184
BsaBI GATNNNNATC 1 cut(s) 898
BsaXI ACNNNNNCTCC 4 cut(s) 871, 901, 1020, 1050
Bsc4I CCNNNNNNNGG 5 cut(s) 63, 125, 378, 794, 942
Bse118I RCCGGY 1 cut(s) 95
Bse1I ACTGG 4 cut(s) 614, 692, 885, 996
Bse21I CCTNAGG 2 cut(s) 297, 1377
Bse8I GATNNNNATC 1 cut(s) 898
BseBI CCWGG 3 cut(s) 1062, 1152, 1194
BseGI GGATG 5 cut(s) 154, 544, 604, 721, 775
BseJI GATNNNNATC 1 cut(s) 898
BseLI CCNNNNNNNGG 5 cut(s) 63, 125, 378, 794, 942
BseMII CTCAG 4 cut(s) 92, 311, 387, 1391
BseNI ACTGG 4 cut(s) 614, 692, 885, 996
BseXI GCAGC 6 cut(s) 320, 427, 538, 1096, 1198, 1226
BshFI GGCC 4 cut(s) 983, 1065, 1223, 1375
BshNI GGYRCC 1 cut(s) 320
BsiHKAI GWGCWC 2 cut(s) 516, 619
BsiHKCI CYCGRG 1 cut(s) 144
BsiSI CCGG 2 cut(s) 33, 96
BslFI GGGAC 3 cut(s) 80, 698, 1380
BslI CCNNNNNNNGG 5 cut(s) 63, 125, 378, 794, 942
BsmFI GGGAC 3 cut(s) 80, 698, 1380
BsmI GAATGC 1 cut(s) 284
BsnI GGCC 4 cut(s) 983, 1065, 1223, 1375
BsoBI CYCGRG 1 cut(s) 144
Bsp119I TTCGAA 1 cut(s) 168
Bsp1286I GDGCHC 3 cut(s) 516, 619, 884
Bsp143I GATC 4 cut(s) 400, 485, 696, 838
Bsp1720I GCTNAGC 1 cut(s) 768
BspACI CCGC 3 cut(s) 102, 760, 877
BspANI GGCC 4 cut(s) 983, 1065, 1223, 1375
BspCNI CTCAG 4 cut(s) 91, 310, 386, 1390
BspLI GGNNCC 7 cut(s) 9, 37, 303, 322, 487, 881, 1149
BspMAI CTGCAG 3 cut(s) 338, 1024, 1216
BspPI GGATC 2 cut(s) 480, 493
BspQI GCTCTTC 1 cut(s) 1114
BspT104I TTCGAA 1 cut(s) 168
BspT107I GGYRCC 1 cut(s) 320
BsrFI RCCGGY 1 cut(s) 95
BsrI ACTGG 4 cut(s) 614, 692, 885, 996
BssAI RCCGGY 1 cut(s) 95
BssMI GATC 4 cut(s) 400, 485, 696, 838
BssNAI GTATAC 1 cut(s) 890
BssSI CACGAG 1 cut(s) 509
Bst1107I GTATAC 1 cut(s) 890
Bst2BI CACGAG 1 cut(s) 509
Bst2UI CCWGG 3 cut(s) 1062, 1152, 1194
Bst4CI ACNGT 3 cut(s) 457, 1007, 1133
Bst6I CTCTTC 2 cut(s) 597, 1114
BstBAI YACGTR 1 cut(s) 184
BstBI TTCGAA 1 cut(s) 168
BstC8I GCNNGC 1 cut(s) 615
BstDEI CTNAG 6 cut(s) 78, 297, 373, 427, 768, 1377
BstF5I GGATG 5 cut(s) 154, 544, 604, 721, 775
BstKTI GATC 4 cut(s) 403, 488, 699, 841
BstMBI GATC 4 cut(s) 400, 485, 696, 838
BstMWI GCNNNNNNNGC 3 cut(s) 339, 440, 1220
BstNI CCWGG 3 cut(s) 1062, 1152, 1194
BstNSI RCATGY 2 cut(s) 225, 1234
BstSCI CCNGG 4 cut(s) 31, 1060, 1150, 1192
BstSFI CTRYAG 5 cut(s) 136, 334, 1020, 1200, 1212
BstV1I GCAGC 6 cut(s) 320, 427, 538, 1096, 1198, 1226
BstV2I GAAGAC 1 cut(s) 794
BstX2I RGATCY 1 cut(s) 485
BstYI RGATCY 1 cut(s) 485
BstZ17I GTATAC 1 cut(s) 890
Bsu36I CCTNAGG 2 cut(s) 297, 1377
BsuRI GGCC 4 cut(s) 983, 1065, 1223, 1375
BtsCI GGATG 5 cut(s) 154, 544, 604, 721, 775
BtsI GCAGTG 1 cut(s) 349
BtsIMutI CAGTG 3 cut(s) 349, 1003, 1012
Cac8I GCNNGC 1 cut(s) 615
Cfr10I RCCGGY 1 cut(s) 95
Cfr13I GGNCC 3 cut(s) 8, 982, 1148
CseI GACGC 1 cut(s) 1382
Csp6I GTAC 5 cut(s) 133, 350, 830, 845, 1311
CviAII CATG 8 cut(s) 92, 113, 222, 269, 545, 1082, 1231, 1276
CviQI GTAC 5 cut(s) 133, 350, 830, 845, 1311
DdeI CTNAG 6 cut(s) 78, 297, 373, 427, 768, 1377
DpnI GATC 4 cut(s) 402, 487, 698, 840
DpnII GATC 4 cut(s) 400, 485, 696, 838
DraIII CACNNNGTG 1 cut(s) 330
Eam1104I CTCTTC 2 cut(s) 597, 1114
EarI CTCTTC 2 cut(s) 597, 1114
Ecl136II GAGCTC 2 cut(s) 514, 617
Eco147I AGGCCT 1 cut(s) 1223
Eco24I GRGCYC 3 cut(s) 516, 619, 884
Eco47I GGWCC 2 cut(s) 8, 1148
Eco53kI GAGCTC 2 cut(s) 514, 617
Eco57I CTGAAG 1 cut(s) 663
Eco81I CCTNAGG 2 cut(s) 297, 1377
Eco88I CYCGRG 1 cut(s) 144
EcoICRI GAGCTC 2 cut(s) 514, 617
EcoRI GAATTC 1 cut(s) 1162
EcoRII CCWGG 3 cut(s) 1060, 1150, 1192
EcoT22I ATGCAT 1 cut(s) 284
EcoT38I GRGCYC 3 cut(s) 516, 619, 884
FaeI CATG 8 cut(s) 95, 116, 225, 272, 548, 1085, 1234, 1279
FalI AAGNNNNNCTT 4 cut(s) 378, 410, 819, 851
FaqI GGGAC 3 cut(s) 80, 698, 1380
FatI CATG 8 cut(s) 91, 112, 221, 268, 544, 1081, 1230, 1275
FbaI TGATCA 1 cut(s) 696
FblI GTMKAC 1 cut(s) 889
Fnu4HI GCNGC 6 cut(s) 334, 441, 552, 1110, 1212, 1215
FokI GGATG 5 cut(s) 161, 551, 611, 728, 762
FriOI GRGCYC 3 cut(s) 516, 619, 884
Fsp4HI GCNGC 6 cut(s) 334, 441, 552, 1110, 1212, 1215
FspBI CTAG 1 cut(s) 18
GluI GCNGC 6 cut(s) 334, 441, 552, 1110, 1212, 1215
HaeIII GGCC 4 cut(s) 983, 1065, 1223, 1375
HapII CCGG 2 cut(s) 33, 96
HgaI GACGC 1 cut(s) 1382
Hin1II CATG 8 cut(s) 95, 116, 225, 272, 548, 1085, 1234, 1279
HincII GTYRAC 2 cut(s) 912, 967
HindII GTYRAC 2 cut(s) 912, 967
HindIII AAGCTT 1 cut(s) 770
HinfI GANTC 8 cut(s) 13, 44, 532, 662, 920, 1010, 1046, 1184
HpaII CCGG 2 cut(s) 33, 96
HphI GGTGA 3 cut(s) 536, 737, 1187
Hpy166II GTNNAC 3 cut(s) 890, 912, 967
Hpy188I TCNGA 4 cut(s) 12, 376, 580, 643
Hpy188III TCNNGA 7 cut(s) 146, 299, 464, 509, 536, 745, 836
Hpy8I GTNNAC 3 cut(s) 890, 912, 967
HpyAV CCTTC 4 cut(s) 515, 578, 798, 1279
HpyCH4III ACNGT 3 cut(s) 457, 1007, 1133
HpyCH4IV ACGT 1 cut(s) 183
HpyCH4V TGCA 7 cut(s) 266, 282, 336, 554, 1022, 1129, 1214
HpyF10VI GCNNNNNNNGC 3 cut(s) 339, 440, 1220
HpyF3I CTNAG 6 cut(s) 78, 297, 373, 427, 768, 1377
HpySE526I ACGT 1 cut(s) 183
Hsp92II CATG 8 cut(s) 95, 116, 225, 272, 548, 1085, 1234, 1279
Ksp22I TGATCA 1 cut(s) 696
Kzo9I GATC 4 cut(s) 400, 485, 696, 838
LguI GCTCTTC 1 cut(s) 1114
LmnI GCTCC 3 cut(s) 247, 820, 879
Lsp1109I GCAGC 6 cut(s) 320, 427, 538, 1096, 1198, 1226
LweI GCATC 1 cut(s) 538
MaeI CTAG 1 cut(s) 18
MaeII ACGT 1 cut(s) 183
MaeIII GTNAC 2 cut(s) 235, 506
MalI GATC 4 cut(s) 402, 487, 698, 840
MboI GATC 4 cut(s) 400, 485, 696, 838
MflI RGATCY 1 cut(s) 485
MhlI GDGCHC 3 cut(s) 516, 619, 884
MlyI GAGTC 3 cut(s) 22, 38, 671
MmeI TCCRAC 2 cut(s) 447, 951
Mph1103I ATGCAT 1 cut(s) 284
MroXI GAANNNNTTC 3 cut(s) 291, 531, 1332
MseI TTAA 2 cut(s) 558, 1389
MslI CAYNNNNRTG 1 cut(s) 273
MspI CCGG 2 cut(s) 33, 96
MspR9I CCNGG 4 cut(s) 33, 1062, 1152, 1194
Mva1269I GAATGC 1 cut(s) 284
MvaI CCWGG 3 cut(s) 1062, 1152, 1194
MwoI GCNNNNNNNGC 3 cut(s) 339, 440, 1220
NciI CCSGG 1 cut(s) 33
NdeII GATC 4 cut(s) 400, 485, 696, 838
NlaIII CATG 8 cut(s) 95, 116, 225, 272, 548, 1085, 1234, 1279
NlaIV GGNNCC 7 cut(s) 9, 37, 303, 322, 487, 881, 1149
NmuCI GTSAC 2 cut(s) 235, 506
NsiI ATGCAT 1 cut(s) 284
NspI RCATGY 2 cut(s) 225, 1234
NspV TTCGAA 1 cut(s) 168
PceI AGGCCT 1 cut(s) 1223
PciI ACATGT 2 cut(s) 221, 1230
PciSI GCTCTTC 1 cut(s) 1114
PctI GAATGC 1 cut(s) 284
PdmI GAANNNNTTC 3 cut(s) 291, 531, 1332
PfeI GAWTC 5 cut(s) 532, 920, 1010, 1046, 1184
PflMI CCANNNNNTGG 1 cut(s) 942
PfoI TCCNGGA 1 cut(s) 1150
PkrI GCNGC 6 cut(s) 335, 442, 553, 1111, 1213, 1216
PleI GAGTC 3 cut(s) 21, 38, 670
PpsI GAGTC 3 cut(s) 21, 38, 670
Ppu21I YACGTR 1 cut(s) 184
PscI ACATGT 2 cut(s) 221, 1230
PsiI TTATAA 1 cut(s) 854
Psp124BI GAGCTC 2 cut(s) 516, 619
Psp6I CCWGG 3 cut(s) 1060, 1150, 1192
PspGI CCWGG 3 cut(s) 1060, 1150, 1192
PspN4I GGNNCC 7 cut(s) 9, 37, 303, 322, 487, 881, 1149
PspPI GGNCC 3 cut(s) 8, 982, 1148
PstI CTGCAG 3 cut(s) 338, 1024, 1216
PsuI RGATCY 1 cut(s) 485
RsaI GTAC 5 cut(s) 134, 351, 831, 846, 1312
RsaNI GTAC 5 cut(s) 133, 350, 830, 845, 1311
RseI CAYNNNNRTG 1 cut(s) 273
SacI GAGCTC 2 cut(s) 516, 619
SapI GCTCTTC 1 cut(s) 1114
SaqAI TTAA 2 cut(s) 558, 1389
SatI GCNGC 6 cut(s) 334, 441, 552, 1110, 1212, 1215
Sau3AI GATC 4 cut(s) 400, 485, 696, 838
Sau96I GGNCC 3 cut(s) 8, 982, 1148
SchI GAGTC 3 cut(s) 22, 38, 671
ScrFI CCNGG 4 cut(s) 33, 1062, 1152, 1194
SduI GDGCHC 3 cut(s) 516, 619, 884
SfaNI GCATC 1 cut(s) 538
SfcI CTRYAG 5 cut(s) 136, 334, 1020, 1200, 1212
SfuI TTCGAA 1 cut(s) 168
SinI GGWCC 2 cut(s) 8, 1148
SmiMI CAYNNNNRTG 1 cut(s) 273
SseBI AGGCCT 1 cut(s) 1223
SsiI CCGC 3 cut(s) 102, 760, 877
SspMI CTAG 1 cut(s) 18
SstI GAGCTC 2 cut(s) 516, 619
StuI AGGCCT 1 cut(s) 1223
StyD4I CCNGG 4 cut(s) 31, 1060, 1150, 1192
TaaI ACNGT 3 cut(s) 457, 1007, 1133
TaiI ACGT 1 cut(s) 186
TaqI TCGA 1 cut(s) 168
TatI WGTACW 2 cut(s) 829, 1310
TfiI GAWTC 5 cut(s) 532, 920, 1010, 1046, 1184
Tru1I TTAA 2 cut(s) 558, 1389
Tru9I TTAA 2 cut(s) 558, 1389
TscAI CASTG 3 cut(s) 349, 1003, 1012
TseFI GTSAC 2 cut(s) 235, 506
TseI GCWGC 6 cut(s) 333, 440, 551, 1109, 1211, 1214
Tsp45I GTSAC 2 cut(s) 235, 506
TspDTI ATGAA 9 cut(s) 285, 534, 582, 597, 615, 764, 1038, 1089, 1098
TspRI CASTG 3 cut(s) 349, 1003, 1012
Van91I CCANNNNNTGG 1 cut(s) 942
VpaK11BI GGWCC 2 cut(s) 8, 1148
XapI RAATTY 4 cut(s) 164, 312, 975, 1162
XceI RCATGY 2 cut(s) 225, 1234
XcmI CCANNNNNNNNNTGG 1 cut(s) 939
XmiI GTMKAC 1 cut(s) 889
XmnI GAANNNNTTC 3 cut(s) 291, 531, 1332
XspI CTAG 1 cut(s) 18
Zsp2I ATGCAT 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.