MD14G1242800.v1.1

1-aminocyclopropane-1-carboxylate deaminase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
32112056 .. 32119376
7321 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1242800.v1.1.491

Sequence Viewer

Length: 1290 bp
ATGTTGGTTAGTCGCAGCTTCCTCTTCTCTCCGATTAACAAACTCACCGTCTTCTCCCAATCCCAACCCCAACACACTCGCCTTCTCTTACAGTCTCATCGGATTCACACTATGGCAGCGGAGGCCGCCACCACCAACACCTCCAATGCGACGGCGAAGGCCGCGGGGATGGACTTCCTGACGAAAAAGGTCTACACTCCTCCTCCTTGGGCGTCCCACATCAACCCCATCCCTTCTCACACCTTCTCTCTCGGACACCTTCCGACTCCAATTCACAAATGGAATCTTCCCAATTTGCCCCCCAACACTGAGGTCTGGTTAAAGCGTGATGATCTTTCGGGAATGCAACTGAGCGGTAACAAAGTCAGAAAATTGGAGTTCTTAATGGCAGATGCGGTAGAGAAGGGTGCGGACTGTATCGTGACGATAGGGGGCATCCAAAGCAACCACTGTCGTGCAACTGCAGTGGCTGCCAAGTATCTCAATCTTGACTGCTATCTCATTCTACGTACTTCAAAGGTTCTTGTCGACCAAGATCCTGGACTGACTGGCAATCTCCTGGTTGAGCGTTTAGTTGGAGCTCATGTTGATTTAATTTCAAAAGAAGAGTATGCAAAAATCGGGAGTGGGGTTCTCACTAATCTCTTAAAGGAAAAACTACTAAAAGAAGGAAGAAGGCCATATGTTATTCCTGTTGGCGGATCAAATTCCCTCGGAACTTGGGGCTATATTGAAGCAATACGTGAGATTGAGGAGCAGCTTCGGAGTGGAACAGACAAAGTAAAGTTTGATGATATTGTGGTTGCTTGTGGCAGTGGGGGTTCAGTTGCTGGTTTGTCATTGGCTTCTTGGCTCAGTTCGTTGAAGGCAAAAGTTAACGCATTTTCTGTCTGTGACGACCCTGATTACTTCTACGACTATGTTCAAGGCCTACTTGACGGGCTTGAGGCAGGTGTTGATTCACGTAATATTGTTGACATTCAGAATGCCAAAGGTCTGGGCTATGCAATTAACACCTCTGAAGAGATTAATTTTGTCAAGGAGATTGCTGCGACCACTGGGATTGTTCTTGATCCAGTTTACAGTGGCAAAGCTGCTTATGGAATGATGAAAGACATGGCTGAGAATCCAAAGAAGTGGGAAGGAAGAAGGGTCCTCTTCATACACACAGGCGGGCTACTTGGGTTGTACGACAAGGTAGAACAGATGGCTCCATTGTTGGGAAATTGGCGTCGGATGGATGTCAACGAATCTGTTCCTCGGATTGATGGTCTCGGGAAAATGTTCTAA

Protein Analysis

430

Amino Acids

46.99

Weight (kDa)

7.66

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PALP PF00291 83 - 391 1.2e-34 Pyridoxal-phosphate dependent enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 941
Acc36I ACCTGC 1 cut(s) 941
AccBSI CCGCTC 1 cut(s) 354
AccI GTMKAC 2 cut(s) 192, 528
AccII CGCG 1 cut(s) 164
AciI CCGC 9 cut(s) 119, 126, 162, 164, 354, 395, 410, 699, 1173
AclWI GGATC 3 cut(s) 530, 709, 1067
AcsI RAATTY 1 cut(s) 706
AcuI CTGAAG 1 cut(s) 1041
AcyI GRCGYC 2 cut(s) 212, 1231
AfaI GTAC 2 cut(s) 511, 1190
AfiI CCNNNNNNNGG 2 cut(s) 698, 1220
AgsI TTSAA 5 cut(s) 516, 600, 734, 865, 926
AjnI CCWGG 2 cut(s) 538, 558
AleI CACNNNNGTG 1 cut(s) 453
AluBI AGCT 4 cut(s) 18, 581, 760, 1094
AluI AGCT 4 cut(s) 18, 581, 760, 1094
Alw21I GWGCWC 1 cut(s) 583
Alw26I GTCTC 2 cut(s) 99, 1277
AlwI GGATC 3 cut(s) 530, 709, 1067
AlwNI CAGNNNCTG 2 cut(s) 470, 830
Ama87I CYCGRG 1 cut(s) 1274
AoxI GGCC 4 cut(s) 123, 159, 677, 928
ApeKI GCWGC 6 cut(s) 15, 116, 470, 757, 1049, 1094
ApoI RAATTY 1 cut(s) 706
ArsI GACNNNNNNTTYG 2 cut(s) 33, 65
AseI ATTAAT 1 cut(s) 1029
Asp700I GAANNNNTTC 2 cut(s) 1254, 1283
AspS9I GGNCC 1 cut(s) 1153
AsuHPI GGTGA 1 cut(s) 37
AvaI CYCGRG 1 cut(s) 1274
AvaII GGWCC 1 cut(s) 1153
BanII GRGCYC 1 cut(s) 583
BbsI GAAGAC 1 cut(s) 43
Bbv12I GWGCWC 1 cut(s) 583
BbvI GCAGC 6 cut(s) 27, 128, 457, 769, 1036, 1081
BccI CCATC 5 cut(s) 163, 236, 1201, 1231, 1262
BceAI ACGGC 1 cut(s) 168
BciT130I CCWGG 2 cut(s) 540, 560
BcoDI GTCTC 2 cut(s) 99, 1277
BfmI CTRYAG 1 cut(s) 462
BfuAI ACCTGC 1 cut(s) 941
BisI GCNGC 8 cut(s) 16, 117, 126, 162, 471, 758, 1050, 1095
BlsI GCNGC 8 cut(s) 17, 118, 127, 163, 472, 759, 1051, 1096
Bme1390I CCNGG 2 cut(s) 540, 560
Bme18I GGWCC 1 cut(s) 1153
BmeT110I CYCGRG 1 cut(s) 1274
BmgT120I GGNCC 1 cut(s) 1153
BmiI GGNNCC 2 cut(s) 1154, 1212
BmrFI CCNGG 2 cut(s) 540, 560
BmrI ACTGGG 1 cut(s) 1068
BmsI GCATC 2 cut(s) 382, 444
BmuI ACTGGG 1 cut(s) 1068
BpiI GAAGAC 1 cut(s) 43
BpuEI CTTGAG 1 cut(s) 965
BsaAI YACGTR 3 cut(s) 509, 743, 965
BsaHI GRCGYC 2 cut(s) 212, 1231
BsaI GGTCTC 1 cut(s) 1277
BsaJI CCNNGG 4 cut(s) 162, 206, 712, 1259
BsaXI ACNNNNNCTCC 4 cut(s) 187, 217, 570, 600
Bsc4I CCNNNNNNNGG 2 cut(s) 698, 1220
Bse1I ACTGG 3 cut(s) 553, 1063, 1076
BseBI CCWGG 2 cut(s) 540, 560
BseDI CCNNGG 4 cut(s) 162, 206, 712, 1259
BseGI GGATG 5 cut(s) 174, 228, 435, 1242, 1246
BseLI CCNNNNNNNGG 2 cut(s) 698, 1220
BseMII CTCAG 4 cut(s) 300, 341, 868, 1113
BseNI ACTGG 3 cut(s) 553, 1063, 1076
BseRI GAGGAG 3 cut(s) 189, 192, 767
BseXI GCAGC 6 cut(s) 27, 128, 457, 769, 1036, 1081
Bsh1236I CGCG 1 cut(s) 164
BshFI GGCC 4 cut(s) 125, 161, 679, 930
BsiHKAI GWGCWC 1 cut(s) 583
BsiHKCI CYCGRG 1 cut(s) 1274
BslFI GGGAC 1 cut(s) 199
BslI CCNNNNNNNGG 2 cut(s) 698, 1220
BsmAI GTCTC 2 cut(s) 99, 1277
BsmFI GGGAC 1 cut(s) 199
BsmI GAATGC 2 cut(s) 348, 991
BsnI GGCC 4 cut(s) 125, 161, 679, 930
Bso31I GGTCTC 1 cut(s) 1277
BsoBI CYCGRG 1 cut(s) 1274
Bsp1286I GDGCHC 1 cut(s) 583
Bsp143I GATC 4 cut(s) 331, 535, 701, 1072
BspACI CCGC 9 cut(s) 119, 126, 162, 164, 354, 395, 410, 699, 1173
BspANI GGCC 4 cut(s) 125, 161, 679, 930
BspCNI CTCAG 4 cut(s) 301, 342, 867, 1114
BspFNI CGCG 1 cut(s) 164
BspLI GGNNCC 2 cut(s) 1154, 1212
BspMAI CTGCAG 1 cut(s) 466
BspMI ACCTGC 1 cut(s) 941
BspPI GGATC 3 cut(s) 530, 709, 1067
BspTNI GGTCTC 1 cut(s) 1277
BsrBI CCGCTC 1 cut(s) 354
BsrI ACTGG 3 cut(s) 553, 1063, 1076
BssECI CCNNGG 4 cut(s) 162, 206, 712, 1259
BssMI GATC 4 cut(s) 331, 535, 701, 1072
BssNI GRCGYC 2 cut(s) 212, 1231
BssT1I CCWWGG 1 cut(s) 206
Bst2UI CCWGG 2 cut(s) 540, 560
Bst4CI ACNGT 5 cut(s) 49, 93, 416, 452, 1085
Bst6I CTCTTC 4 cut(s) 29, 600, 1017, 1163
BstACI GRCGYC 2 cut(s) 212, 1231
BstAPI GCANNNNNTGC 1 cut(s) 470
BstBAI YACGTR 3 cut(s) 509, 743, 965
BstC8I GCNNGC 1 cut(s) 1175
BstDEI CTNAG 4 cut(s) 309, 350, 854, 1122
BstDSI CCRYGG 1 cut(s) 162
BstF5I GGATG 5 cut(s) 174, 228, 435, 1242, 1246
BstFNI CGCG 1 cut(s) 164
BstKTI GATC 4 cut(s) 334, 538, 704, 1075
BstMAI GTCTC 2 cut(s) 99, 1277
BstMBI GATC 4 cut(s) 331, 535, 701, 1072
BstMWI GCNNNNNNNGC 5 cut(s) 122, 125, 161, 441, 470
BstNI CCWGG 2 cut(s) 540, 560
BstSCI CCNGG 2 cut(s) 538, 558
BstSFI CTRYAG 1 cut(s) 462
BstSNI TACGTA 1 cut(s) 509
BstUI CGCG 1 cut(s) 164
BstV1I GCAGC 6 cut(s) 27, 128, 457, 769, 1036, 1081
BstV2I GAAGAC 1 cut(s) 43
BstX2I RGATCY 1 cut(s) 535
BstXI CCANNNNNNTGG 3 cut(s) 539, 997, 1137
BstYI RGATCY 1 cut(s) 535
BsuRI GGCC 4 cut(s) 125, 161, 679, 930
BtgI CCRYGG 1 cut(s) 162
BtsCI GGATG 5 cut(s) 174, 228, 435, 1242, 1246
BtsI GCAGTG 2 cut(s) 471, 820
BtsIMutI CAGTG 6 cut(s) 306, 448, 471, 820, 1056, 1090
BveI ACCTGC 1 cut(s) 941
Cac8I GCNNGC 1 cut(s) 1175
CaiI CAGNNNCTG 2 cut(s) 470, 830
Cfr13I GGNCC 1 cut(s) 1153
Cfr42I CCGCGG 1 cut(s) 165
CseI GACGC 2 cut(s) 201, 1220
Csp6I GTAC 2 cut(s) 510, 1189
CspCI CAANNNNNGTGG 4 cut(s) 447, 482, 1045, 1080
CviAII CATG 2 cut(s) 584, 1117
CviQI GTAC 2 cut(s) 510, 1189
DdeI CTNAG 4 cut(s) 309, 350, 854, 1122
DpnI GATC 4 cut(s) 333, 537, 703, 1074
DpnII GATC 4 cut(s) 331, 535, 701, 1072
Eam1104I CTCTTC 4 cut(s) 29, 600, 1017, 1163
EarI CTCTTC 4 cut(s) 29, 600, 1017, 1163
EciI GGCGGA 1 cut(s) 714
Ecl136II GAGCTC 1 cut(s) 581
Eco105I TACGTA 1 cut(s) 509
Eco130I CCWWGG 1 cut(s) 206
Eco147I AGGCCT 1 cut(s) 930
Eco24I GRGCYC 1 cut(s) 583
Eco31I GGTCTC 1 cut(s) 1277
Eco47I GGWCC 1 cut(s) 1153
Eco53kI GAGCTC 1 cut(s) 581
Eco57I CTGAAG 1 cut(s) 1041
Eco88I CYCGRG 1 cut(s) 1274
EcoICRI GAGCTC 1 cut(s) 581
EcoO109I RGGNCCY 1 cut(s) 1153
EcoRII CCWGG 2 cut(s) 538, 558
EcoT14I CCWWGG 1 cut(s) 206
EcoT38I GRGCYC 1 cut(s) 583
ErhI CCWWGG 1 cut(s) 206
FaeI CATG 2 cut(s) 587, 1120
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FaqI GGGAC 1 cut(s) 199
FatI CATG 2 cut(s) 583, 1116
FauI CCCGC 2 cut(s) 157, 1166
FauNDI CATATG 1 cut(s) 682
FblI GTMKAC 2 cut(s) 192, 528
Fnu4HI GCNGC 8 cut(s) 16, 117, 126, 162, 471, 758, 1050, 1095
FokI GGATG 5 cut(s) 181, 215, 422, 1249, 1253
FriOI GRGCYC 1 cut(s) 583
Fsp4HI GCNGC 8 cut(s) 16, 117, 126, 162, 471, 758, 1050, 1095
GluI GCNGC 8 cut(s) 16, 117, 126, 162, 471, 758, 1050, 1095
HaeIII GGCC 4 cut(s) 125, 161, 679, 930
HgaI GACGC 2 cut(s) 201, 1220
Hin1I GRCGYC 2 cut(s) 212, 1231
Hin1II CATG 2 cut(s) 587, 1120
HincII GTYRAC 4 cut(s) 529, 877, 976, 1246
HindII GTYRAC 4 cut(s) 529, 877, 976, 1246
HinfI GANTC 6 cut(s) 103, 265, 283, 959, 1126, 1250
HpaI GTTAAC 1 cut(s) 877
HphI GGTGA 1 cut(s) 37
Hpy166II GTNNAC 6 cut(s) 193, 529, 877, 976, 1081, 1246
Hpy188III TCNNGA 7 cut(s) 178, 339, 421, 488, 622, 1070, 1276
Hpy8I GTNNAC 6 cut(s) 193, 529, 877, 976, 1081, 1246
Hpy99I CGWCG 2 cut(s) 154, 1236
HpyCH4III ACNGT 5 cut(s) 49, 93, 416, 452, 1085
HpyCH4IV ACGT 3 cut(s) 508, 742, 964
HpyCH4V TGCA 5 cut(s) 346, 458, 464, 614, 1007
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 125, 161, 441, 470
HpyF3I CTNAG 4 cut(s) 309, 350, 854, 1122
HpySE526I ACGT 3 cut(s) 508, 742, 964
Hsp92I GRCGYC 2 cut(s) 212, 1231
Hsp92II CATG 2 cut(s) 587, 1120
KspAI GTTAAC 1 cut(s) 877
KspI CCGCGG 1 cut(s) 165
Kzo9I GATC 4 cut(s) 331, 535, 701, 1072
LmnI GCTCC 3 cut(s) 578, 754, 1216
Lsp1109I GCAGC 6 cut(s) 27, 128, 457, 769, 1036, 1081
LweI GCATC 2 cut(s) 382, 444
MaeII ACGT 3 cut(s) 508, 742, 964
MaeIII GTNAC 3 cut(s) 356, 421, 893
MalI GATC 4 cut(s) 333, 537, 703, 1074
MbiI CCGCTC 1 cut(s) 354
MboI GATC 4 cut(s) 331, 535, 701, 1072
MboII GAAGA 8 cut(s) 16, 43, 278, 617, 684, 1034, 1150, 1158
MflI RGATCY 1 cut(s) 535
MhlI GDGCHC 1 cut(s) 583
MluCI AATT 8 cut(s) 270, 292, 371, 594, 706, 1008, 1030, 1225
MlyI GAGTC 1 cut(s) 259
MmeI TCCRAC 3 cut(s) 287, 556, 1214
MroXI GAANNNNTTC 2 cut(s) 1254, 1283
MseI TTAA 8 cut(s) 36, 320, 383, 593, 647, 876, 1011, 1029
MslI CAYNNNNRTG 1 cut(s) 453
MspA1I CMGCKG 2 cut(s) 119, 164
MspR9I CCNGG 2 cut(s) 540, 560
Mva1269I GAATGC 2 cut(s) 348, 991
MvaI CCWGG 2 cut(s) 540, 560
MvnI CGCG 1 cut(s) 164
MwoI GCNNNNNNNGC 5 cut(s) 122, 125, 161, 441, 470
NdeI CATATG 1 cut(s) 682
NdeII GATC 4 cut(s) 331, 535, 701, 1072
NlaIII CATG 2 cut(s) 587, 1120
NlaIV GGNNCC 2 cut(s) 1154, 1212
NmuCI GTSAC 2 cut(s) 421, 893
OliI CACNNNNGTG 1 cut(s) 453
PaqCI CACCTGC 1 cut(s) 941
PceI AGGCCT 1 cut(s) 930
PctI GAATGC 2 cut(s) 348, 991
PdmI GAANNNNTTC 2 cut(s) 1254, 1283
PfeI GAWTC 5 cut(s) 103, 283, 959, 1126, 1250
PfoI TCCNGGA 1 cut(s) 538
PkrI GCNGC 8 cut(s) 17, 118, 127, 163, 472, 759, 1051, 1096
PleI GAGTC 1 cut(s) 259
PpsI GAGTC 1 cut(s) 259
Ppu21I YACGTR 3 cut(s) 509, 743, 965
PpuMI RGGWCCY 1 cut(s) 1153
PshBI ATTAAT 1 cut(s) 1029
Psp124BI GAGCTC 1 cut(s) 583
Psp5II RGGWCCY 1 cut(s) 1153
Psp6I CCWGG 2 cut(s) 538, 558
PspGI CCWGG 2 cut(s) 538, 558
PspN4I GGNNCC 2 cut(s) 1154, 1212
PspPI GGNCC 1 cut(s) 1153
PspPPI RGGWCCY 1 cut(s) 1153
PstI CTGCAG 1 cut(s) 466
PstNI CAGNNNCTG 2 cut(s) 470, 830
PsuI RGATCY 1 cut(s) 535
RsaI GTAC 2 cut(s) 511, 1190
RsaNI GTAC 2 cut(s) 510, 1189
RseI CAYNNNNRTG 1 cut(s) 453
SacI GAGCTC 1 cut(s) 583
SacII CCGCGG 1 cut(s) 165
SalI GTCGAC 1 cut(s) 527
SaqAI TTAA 8 cut(s) 36, 320, 383, 593, 647, 876, 1011, 1029
SatI GCNGC 8 cut(s) 16, 117, 126, 162, 471, 758, 1050, 1095
Sau3AI GATC 4 cut(s) 331, 535, 701, 1072
Sau96I GGNCC 1 cut(s) 1153
SchI GAGTC 1 cut(s) 259
ScrFI CCNGG 2 cut(s) 540, 560
SduI GDGCHC 1 cut(s) 583
SfaNI GCATC 2 cut(s) 382, 444
SfcI CTRYAG 1 cut(s) 462
Sfr303I CCGCGG 1 cut(s) 165
SgrBI CCGCGG 1 cut(s) 165
SinI GGWCC 1 cut(s) 1153
SmiMI CAYNNNNRTG 1 cut(s) 453
SmlI CTYRAG 1 cut(s) 944
SmoI CTYRAG 1 cut(s) 944
SnaBI TACGTA 1 cut(s) 509
Sse9I AATT 8 cut(s) 270, 292, 371, 594, 706, 1008, 1030, 1225
SseBI AGGCCT 1 cut(s) 930
SsiI CCGC 9 cut(s) 119, 126, 162, 164, 354, 395, 410, 699, 1173
SspI AATATT 1 cut(s) 970
SstI GAGCTC 1 cut(s) 583
StuI AGGCCT 1 cut(s) 930
StyD4I CCNGG 2 cut(s) 538, 558
StyI CCWWGG 1 cut(s) 206
TaaI ACNGT 5 cut(s) 49, 93, 416, 452, 1085
TaiI ACGT 3 cut(s) 511, 745, 967
TaqI TCGA 1 cut(s) 528
TasI AATT 8 cut(s) 270, 292, 371, 594, 706, 1008, 1030, 1225
TauI GCSGC 2 cut(s) 128, 164
TfiI GAWTC 5 cut(s) 103, 283, 959, 1126, 1250
Tru1I TTAA 8 cut(s) 36, 320, 383, 593, 647, 876, 1011, 1029
Tru9I TTAA 8 cut(s) 36, 320, 383, 593, 647, 876, 1011, 1029
TscAI CASTG 6 cut(s) 313, 455, 471, 820, 1063, 1090
TseFI GTSAC 2 cut(s) 421, 893
TseI GCWGC 6 cut(s) 15, 116, 470, 757, 1049, 1094
Tsp45I GTSAC 2 cut(s) 421, 893
TspDTI ATGAA 2 cut(s) 1124, 1150
TspRI CASTG 6 cut(s) 313, 455, 471, 820, 1063, 1090
VpaK11BI GGWCC 1 cut(s) 1153
VspI ATTAAT 1 cut(s) 1029
XapI RAATTY 1 cut(s) 706
XcmI CCANNNNNNNNNTGG 1 cut(s) 276
XmiI GTMKAC 2 cut(s) 192, 528
XmnI GAANNNNTTC 2 cut(s) 1254, 1283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.