Prupe.5G240500_v2.0.a1

1-aminocyclopropane-1-carboxylate deaminase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
18121475 .. 18125678
4204 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G240500.1

Sequence Viewer

Length: 1299 bp
ATGTTGTGCAATCGCAGCTTCCCCATTCCTCCGATTAACAAAGTCACCGCCGTCATCACCCAACACAACGTACACCATCACAAACGCCTCGACATTCTCAGACTGTTTCAGTCTCATCAGACTCGCACAATGGAAGTGGAGGCCAACACCAACAGTTCCCATATGAGGGCGGTGGGGTTGGACTTCCTGACAAAGAAGGCCTACACTCCTCCTTCCTGGGCATCCCATATCAACCCCATCCCTTCTCATATCTTCTCTCTCGGACACCTTCCAACTCCAATTCACAAATGGAATCTTCCTAATTTGCCCACCAATACTGAAGTCTGGTTGAAGCGTGATGATCTTTCGGGAATGCAACTGAGTGGCAACAAAGTAAGAAAATTGGAATTCTTGATGGCGGATGCCGTAGCAAAGGGTGCTGACTGTATCATAACGATAGGGGGCATCCAAAGTAACCACTGTCGTGCAACTGCAGTGGCTGCCAAGTATCTCAATCTTGACTGTTATCTCATTCTACGTACCTCTAAGGTTCTCGTGGACCAAGATCCTGGACTGACAGGCAATCTCCTTGTTGAACGTCTAGTTGGAGCTCATGTTGAACTAATTTCAAAAGAAGAGTATGCAAAATTCGGCAGTGGGGATCTTACTAATCTTTTAAAGGAAAGACTGCTAAAAGAAGGAAGAAGGCCATATGTTATTCCTGTTGGTGGATCAAACTCCCTAGGAACCTGGGGGTATATTGAAGCAATTCGAGAGATTGAGGAGCAGCTTCAGAGTGGGACCGACAAAGTAAAGTTTGATGATATTGTTGTTGCTTGTGGCAGTGGGGGTACAATTGCTGGTTTGGGATTGGGCTCTTGGCTGAGTTCGTTGAAGGCAAAAGTCCGTGCCTTTTCTGTCTGTGATGACCCTGATTACTTCTACGACTATGTTCAAGGCCTACTTGATGGACTTGAGGCAGGCGTTGATTCACGTGATATTGTTAACGTTCAAAATGCCAGAGGTCTGGGCTATGCAATAAACACGTCTGAGGAGCTTAAGTTTGTCGCGGAGATTGCTGCGAGCACTGGGGTTGTCCTGGATCCAGTTTACAGTGGCAAAGCTGCTTATGGAATGTTGAAAGACATGGCTGAGAATACAAAGAAGTGGGAAGGAAGAAAGATCCTCTTCATACACACAGGTGGGTTACTTGGGTTGTTTGACAAGGTAGAGCAGATGGCTCCATCGTTGGGAAATTGGCGTCGGATGGATGTCCAAGAATCTGTTCCCCCGAGCGATGGTATCGGGAAAATGTTCTAG

Protein Analysis

433

Amino Acids

47.53

Weight (kDa)

7.21

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1049
AciI CCGC 4 cut(s) 48, 170, 398, 1049
AclI AACGTT 1 cut(s) 987
AclWI GGATC 6 cut(s) 539, 648, 718, 1076, 1089, 1156
AcsI RAATTY 2 cut(s) 386, 626
AcuI CTGAAG 2 cut(s) 339, 755
AcvI CACGTG 1 cut(s) 974
AcyI GRCGYC 1 cut(s) 1240
AfaI GTAC 3 cut(s) 72, 520, 832
AfiI CCNNNNNNNGG 5 cut(s) 165, 166, 707, 1229, 1277
AflII CTTAAG 1 cut(s) 1037
AflIII ACRYGT 1 cut(s) 1023
AgsI TTSAA 9 cut(s) 331, 575, 599, 609, 743, 874, 935, 992, 1120
AjiI CACGTC 1 cut(s) 1026
AjnI CCWGG 4 cut(s) 215, 547, 728, 1077
AjuI GAANNNNNNNTTGG 4 cut(s) 567, 599, 1248, 1280
AleI CACNNNNGTG 2 cut(s) 462, 1179
AluBI AGCT 5 cut(s) 18, 590, 769, 1036, 1103
AluI AGCT 5 cut(s) 18, 590, 769, 1036, 1103
Alw21I GWGCWC 2 cut(s) 592, 1067
Alw26I GTCTC 1 cut(s) 117
AlwI GGATC 6 cut(s) 539, 648, 718, 1076, 1089, 1156
AlwNI CAGNNNCTG 1 cut(s) 479
Ama87I CYCGRG 1 cut(s) 1270
AoxI GGCC 4 cut(s) 141, 198, 686, 937
ApeKI GCWGC 5 cut(s) 15, 479, 766, 1058, 1103
ApoI RAATTY 2 cut(s) 386, 626
Asp700I GAANNNNTTC 3 cut(s) 747, 1263, 1292
AspA2I CCTAGG 1 cut(s) 721
AspS9I GGNCC 2 cut(s) 538, 780
AsuHPI GGTGA 2 cut(s) 37, 49
AvaI CYCGRG 1 cut(s) 1270
AvaII GGWCC 2 cut(s) 538, 780
AvrII CCTAGG 1 cut(s) 721
BamHI GGATCC 1 cut(s) 1081
BanII GRGCYC 2 cut(s) 592, 857
BauI CACGAG 1 cut(s) 533
BbrPI CACGTG 1 cut(s) 974
Bbv12I GWGCWC 2 cut(s) 592, 1067
BbvI GCAGC 5 cut(s) 27, 466, 778, 1045, 1090
BccI CCATC 8 cut(s) 84, 245, 388, 941, 1210, 1231, 1240, 1271
BceAI ACGGC 2 cut(s) 35, 389
BciT130I CCWGG 4 cut(s) 217, 549, 730, 1079
BcoDI GTCTC 1 cut(s) 117
BfaI CTAG 3 cut(s) 581, 722, 1297
BfmI CTRYAG 1 cut(s) 471
BfrI CTTAAG 1 cut(s) 1037
BisI GCNGC 5 cut(s) 16, 480, 767, 1059, 1104
BlnI CCTAGG 1 cut(s) 721
BlsI GCNGC 5 cut(s) 17, 481, 768, 1060, 1105
Bme1390I CCNGG 4 cut(s) 217, 549, 730, 1079
Bme18I GGWCC 2 cut(s) 538, 780
BmeT110I CYCGRG 1 cut(s) 1270
BmgBI CACGTC 1 cut(s) 1026
BmgT120I GGNCC 2 cut(s) 538, 780
BmiI GGNNCC 4 cut(s) 727, 781, 1083, 1221
BmrFI CCNGG 4 cut(s) 217, 549, 730, 1079
BmrI ACTGGG 1 cut(s) 1077
BmsI GCATC 3 cut(s) 230, 391, 453
BmuI ACTGGG 1 cut(s) 1077
BpuEI CTTGAG 1 cut(s) 974
BsaAI YACGTR 2 cut(s) 518, 974
BsaHI GRCGYC 1 cut(s) 1240
BsaJI CCNNGG 3 cut(s) 216, 721, 729
BsaXI ACNNNNNCTCC 4 cut(s) 579, 609, 1025, 1055
Bsc4I CCNNNNNNNGG 5 cut(s) 165, 166, 707, 1229, 1277
Bse1I ACTGG 2 cut(s) 1072, 1085
BseBI CCWGG 4 cut(s) 217, 549, 730, 1079
BseDI CCNNGG 3 cut(s) 216, 721, 729
BseGI GGATG 6 cut(s) 221, 237, 406, 444, 1251, 1255
BseLI CCNNNNNNNGG 5 cut(s) 165, 166, 707, 1229, 1277
BseMII CTCAG 5 cut(s) 112, 350, 854, 1020, 1122
BseNI ACTGG 2 cut(s) 1072, 1085
BseRI GAGGAG 3 cut(s) 198, 776, 1046
BseXI GCAGC 5 cut(s) 27, 466, 778, 1045, 1090
Bsh1236I CGCG 1 cut(s) 1049
BshFI GGCC 4 cut(s) 143, 200, 688, 939
BsiHKAI GWGCWC 2 cut(s) 592, 1067
BsiHKCI CYCGRG 1 cut(s) 1270
BslFI GGGAC 1 cut(s) 793
BslI CCNNNNNNNGG 5 cut(s) 165, 166, 707, 1229, 1277
BsmAI GTCTC 1 cut(s) 117
BsmFI GGGAC 1 cut(s) 793
BsmI GAATGC 1 cut(s) 357
BsnI GGCC 4 cut(s) 143, 200, 688, 939
BsoBI CYCGRG 1 cut(s) 1270
Bsp1286I GDGCHC 3 cut(s) 592, 857, 1067
Bsp143I GATC 6 cut(s) 340, 544, 640, 710, 1081, 1161
BspACI CCGC 4 cut(s) 48, 170, 398, 1049
BspANI GGCC 4 cut(s) 143, 200, 688, 939
BspCNI CTCAG 5 cut(s) 111, 351, 855, 1021, 1123
BspFNI CGCG 1 cut(s) 1049
BspLI GGNNCC 4 cut(s) 727, 781, 1083, 1221
BspMAI CTGCAG 1 cut(s) 475
BspPI GGATC 6 cut(s) 539, 648, 718, 1076, 1089, 1156
BspTI CTTAAG 1 cut(s) 1037
BsrI ACTGG 2 cut(s) 1072, 1085
BssECI CCNNGG 3 cut(s) 216, 721, 729
BssMI GATC 6 cut(s) 340, 544, 640, 710, 1081, 1161
BssNI GRCGYC 1 cut(s) 1240
BssSI CACGAG 1 cut(s) 533
BssT1I CCWWGG 1 cut(s) 721
Bst2BI CACGAG 1 cut(s) 533
Bst2UI CCWGG 4 cut(s) 217, 549, 730, 1079
Bst4CI ACNGT 6 cut(s) 105, 155, 425, 461, 503, 1094
Bst6I CTCTTC 2 cut(s) 609, 1172
BstACI GRCGYC 1 cut(s) 1240
BstAFI CTTAAG 1 cut(s) 1037
BstAPI GCANNNNNTGC 2 cut(s) 416, 479
BstBAI YACGTR 2 cut(s) 518, 974
BstC8I GCNNGC 2 cut(s) 961, 1063
BstDEI CTNAG 6 cut(s) 98, 359, 525, 863, 1029, 1131
BstF5I GGATG 6 cut(s) 221, 237, 406, 444, 1251, 1255
BstFNI CGCG 1 cut(s) 1049
BstKTI GATC 6 cut(s) 343, 547, 643, 713, 1084, 1164
BstMAI GTCTC 1 cut(s) 117
BstMBI GATC 6 cut(s) 340, 544, 640, 710, 1081, 1161
BstMWI GCNNNNNNNGC 4 cut(s) 15, 416, 479, 1055
BstNI CCWGG 4 cut(s) 217, 549, 730, 1079
BstSCI CCNGG 4 cut(s) 215, 547, 728, 1077
BstSFI CTRYAG 1 cut(s) 471
BstSNI TACGTA 1 cut(s) 518
BstUI CGCG 1 cut(s) 1049
BstV1I GCAGC 5 cut(s) 27, 466, 778, 1045, 1090
BstX2I RGATCY 4 cut(s) 544, 640, 1081, 1161
BstXI CCANNNNNNTGG 2 cut(s) 548, 1006
BstYI RGATCY 4 cut(s) 544, 640, 1081, 1161
BsuRI GGCC 4 cut(s) 143, 200, 688, 939
BtgZI GCGATG 1 cut(s) 1290
BtrI CACGTC 1 cut(s) 1026
BtsCI GGATG 6 cut(s) 221, 237, 406, 444, 1251, 1255
BtsI GCAGTG 3 cut(s) 480, 640, 829
BtsIMutI CAGTG 6 cut(s) 457, 480, 640, 829, 1065, 1099
Cac8I GCNNGC 2 cut(s) 961, 1063
CaiI CAGNNNCTG 1 cut(s) 479
Cfr13I GGNCC 2 cut(s) 538, 780
CseI GACGC 1 cut(s) 1229
Csp6I GTAC 3 cut(s) 71, 519, 831
CspCI CAANNNNNGTGG 4 cut(s) 117, 152, 456, 491
CviAII CATG 2 cut(s) 593, 1126
CviQI GTAC 3 cut(s) 71, 519, 831
DdeI CTNAG 6 cut(s) 98, 359, 525, 863, 1029, 1131
DpnI GATC 6 cut(s) 342, 546, 642, 712, 1083, 1163
DpnII GATC 6 cut(s) 340, 544, 640, 710, 1081, 1161
DraI TTTAAA 1 cut(s) 657
Eam1104I CTCTTC 2 cut(s) 609, 1172
EarI CTCTTC 2 cut(s) 609, 1172
EciI GGCGGA 1 cut(s) 413
Ecl136II GAGCTC 1 cut(s) 590
Eco105I TACGTA 1 cut(s) 518
Eco130I CCWWGG 1 cut(s) 721
Eco147I AGGCCT 2 cut(s) 200, 939
Eco24I GRGCYC 2 cut(s) 592, 857
Eco47I GGWCC 2 cut(s) 538, 780
Eco53kI GAGCTC 1 cut(s) 590
Eco57I CTGAAG 2 cut(s) 339, 755
Eco72I CACGTG 1 cut(s) 974
Eco88I CYCGRG 1 cut(s) 1270
EcoICRI GAGCTC 1 cut(s) 590
EcoRI GAATTC 1 cut(s) 386
EcoRII CCWGG 4 cut(s) 215, 547, 728, 1077
EcoT14I CCWWGG 1 cut(s) 721
EcoT38I GRGCYC 2 cut(s) 592, 857
ErhI CCWWGG 1 cut(s) 721
FaeI CATG 2 cut(s) 596, 1129
FalI AAGNNNNNCTT 4 cut(s) 927, 959, 1151, 1183
FaqI GGGAC 1 cut(s) 793
FatI CATG 2 cut(s) 592, 1125
FauNDI CATATG 2 cut(s) 162, 691
Fnu4HI GCNGC 5 cut(s) 16, 480, 767, 1059, 1104
FokI GGATG 6 cut(s) 208, 224, 413, 431, 1258, 1262
FriOI GRGCYC 2 cut(s) 592, 857
Fsp4HI GCNGC 5 cut(s) 16, 480, 767, 1059, 1104
FspBI CTAG 3 cut(s) 581, 722, 1297
GluI GCNGC 5 cut(s) 16, 480, 767, 1059, 1104
HaeIII GGCC 4 cut(s) 143, 200, 688, 939
HgaI GACGC 1 cut(s) 1229
Hin1I GRCGYC 1 cut(s) 1240
Hin1II CATG 2 cut(s) 596, 1129
HincII GTYRAC 1 cut(s) 985
HindII GTYRAC 1 cut(s) 985
HinfI GANTC 4 cut(s) 121, 292, 968, 1259
HpaI GTTAAC 1 cut(s) 985
HphI GGTGA 2 cut(s) 37, 49
Hpy166II GTNNAC 4 cut(s) 73, 538, 985, 1090
Hpy188I TCNGA 7 cut(s) 33, 101, 120, 263, 774, 1030, 1245
Hpy188III TCNNGA 6 cut(s) 187, 348, 391, 497, 752, 1285
Hpy8I GTNNAC 4 cut(s) 73, 538, 985, 1090
Hpy99I CGWCG 1 cut(s) 1245
HpyAV CCTTC 8 cut(s) 190, 222, 252, 278, 671, 678, 868, 1145
HpyCH4III ACNGT 6 cut(s) 105, 155, 425, 461, 503, 1094
HpyCH4IV ACGT 6 cut(s) 69, 517, 577, 973, 987, 1025
HpyCH4V TGCA 6 cut(s) 9, 355, 467, 473, 623, 1016
HpyF10VI GCNNNNNNNGC 4 cut(s) 15, 416, 479, 1055
HpyF3I CTNAG 6 cut(s) 98, 359, 525, 863, 1029, 1131
HpySE526I ACGT 6 cut(s) 69, 517, 577, 973, 987, 1025
Hsp92I GRCGYC 1 cut(s) 1240
Hsp92II CATG 2 cut(s) 596, 1129
KspAI GTTAAC 1 cut(s) 985
Kzo9I GATC 6 cut(s) 340, 544, 640, 710, 1081, 1161
LmnI GCTCC 4 cut(s) 587, 763, 1033, 1225
Lsp1109I GCAGC 5 cut(s) 27, 466, 778, 1045, 1090
LweI GCATC 3 cut(s) 230, 391, 453
MaeI CTAG 3 cut(s) 581, 722, 1297
MaeII ACGT 6 cut(s) 69, 517, 577, 973, 987, 1025
MaeIII GTNAC 3 cut(s) 43, 452, 1185
MalI GATC 6 cut(s) 342, 546, 642, 712, 1083, 1163
MboI GATC 6 cut(s) 340, 544, 640, 710, 1081, 1161
MboII GAAGA 6 cut(s) 244, 287, 626, 693, 1159, 1167
MfeI CAATTG 1 cut(s) 834
MflI RGATCY 4 cut(s) 544, 640, 1081, 1161
MhlI GDGCHC 3 cut(s) 592, 857, 1067
MluCI AATT 9 cut(s) 279, 301, 380, 386, 603, 626, 747, 834, 1234
MlyI GAGTC 1 cut(s) 115
MmeI TCCRAC 4 cut(s) 159, 296, 565, 1223
MroXI GAANNNNTTC 3 cut(s) 747, 1263, 1292
MseI TTAA 4 cut(s) 36, 656, 984, 1038
MslI CAYNNNNRTG 2 cut(s) 462, 1179
MspCI CTTAAG 1 cut(s) 1037
MspR9I CCNGG 4 cut(s) 217, 549, 730, 1079
MunI CAATTG 1 cut(s) 834
Mva1269I GAATGC 1 cut(s) 357
MvaI CCWGG 4 cut(s) 217, 549, 730, 1079
MvnI CGCG 1 cut(s) 1049
MwoI GCNNNNNNNGC 4 cut(s) 15, 416, 479, 1055
NdeI CATATG 2 cut(s) 162, 691
NdeII GATC 6 cut(s) 340, 544, 640, 710, 1081, 1161
NlaIII CATG 2 cut(s) 596, 1129
NlaIV GGNNCC 4 cut(s) 727, 781, 1083, 1221
NmuCI GTSAC 1 cut(s) 43
OliI CACNNNNGTG 2 cut(s) 462, 1179
PceI AGGCCT 2 cut(s) 200, 939
PctI GAATGC 1 cut(s) 357
PdmI GAANNNNTTC 3 cut(s) 747, 1263, 1292
PfeI GAWTC 3 cut(s) 292, 968, 1259
PfoI TCCNGGA 2 cut(s) 547, 1077
PkrI GCNGC 5 cut(s) 17, 481, 768, 1060, 1105
PleI GAGTC 1 cut(s) 115
PmaCI CACGTG 1 cut(s) 974
PmlI CACGTG 1 cut(s) 974
PpsI GAGTC 1 cut(s) 115
Ppu21I YACGTR 2 cut(s) 518, 974
Psp124BI GAGCTC 1 cut(s) 592
Psp1406I AACGTT 1 cut(s) 987
Psp6I CCWGG 4 cut(s) 215, 547, 728, 1077
PspCI CACGTG 1 cut(s) 974
PspGI CCWGG 4 cut(s) 215, 547, 728, 1077
PspN4I GGNNCC 4 cut(s) 727, 781, 1083, 1221
PspPI GGNCC 2 cut(s) 538, 780
PstI CTGCAG 1 cut(s) 475
PstNI CAGNNNCTG 1 cut(s) 479
PsuI RGATCY 4 cut(s) 544, 640, 1081, 1161
RsaI GTAC 3 cut(s) 72, 520, 832
RsaNI GTAC 3 cut(s) 71, 519, 831
RseI CAYNNNNRTG 2 cut(s) 462, 1179
SacI GAGCTC 1 cut(s) 592
SaqAI TTAA 4 cut(s) 36, 656, 984, 1038
SatI GCNGC 5 cut(s) 16, 480, 767, 1059, 1104
Sau3AI GATC 6 cut(s) 340, 544, 640, 710, 1081, 1161
Sau96I GGNCC 2 cut(s) 538, 780
SchI GAGTC 1 cut(s) 115
ScrFI CCNGG 4 cut(s) 217, 549, 730, 1079
SduI GDGCHC 3 cut(s) 592, 857, 1067
SfaNI GCATC 3 cut(s) 230, 391, 453
SfcI CTRYAG 1 cut(s) 471
SinI GGWCC 2 cut(s) 538, 780
SmiMI CAYNNNNRTG 2 cut(s) 462, 1179
SmlI CTYRAG 2 cut(s) 953, 1037
SmoI CTYRAG 2 cut(s) 953, 1037
SnaBI TACGTA 1 cut(s) 518
Sse9I AATT 9 cut(s) 279, 301, 380, 386, 603, 626, 747, 834, 1234
SseBI AGGCCT 2 cut(s) 200, 939
SsiI CCGC 4 cut(s) 48, 170, 398, 1049
SspMI CTAG 3 cut(s) 581, 722, 1297
SstI GAGCTC 1 cut(s) 592
StuI AGGCCT 2 cut(s) 200, 939
StyD4I CCNGG 4 cut(s) 215, 547, 728, 1077
StyI CCWWGG 1 cut(s) 721
TaaI ACNGT 6 cut(s) 105, 155, 425, 461, 503, 1094
TaiI ACGT 6 cut(s) 72, 520, 580, 976, 990, 1028
TaqI TCGA 2 cut(s) 90, 751
TaqII GACCGA 1 cut(s) 797
TasI AATT 9 cut(s) 279, 301, 380, 386, 603, 626, 747, 834, 1234
TfiI GAWTC 3 cut(s) 292, 968, 1259
Tru1I TTAA 4 cut(s) 36, 656, 984, 1038
Tru9I TTAA 4 cut(s) 36, 656, 984, 1038
TscAI CASTG 6 cut(s) 464, 480, 640, 829, 1072, 1099
TseFI GTSAC 1 cut(s) 43
TseI GCWGC 5 cut(s) 15, 479, 766, 1058, 1103
Tsp45I GTSAC 1 cut(s) 43
TspDTI ATGAA 1 cut(s) 1159
TspGWI ACGGA 1 cut(s) 875
TspRI CASTG 6 cut(s) 464, 480, 640, 829, 1072, 1099
Vha464I CTTAAG 1 cut(s) 1037
VpaK11BI GGWCC 2 cut(s) 538, 780
XapI RAATTY 2 cut(s) 386, 626
XcmI CCANNNNNNNNNTGG 1 cut(s) 285
XmaJI CCTAGG 1 cut(s) 721
XmnI GAANNNNTTC 3 cut(s) 747, 1263, 1292
XspI CTAG 3 cut(s) 581, 722, 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.