MD15G1029700.v1.1

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0013791
Physical Location & Seq
Reverse (-)
1821169 .. 1824650
3482 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1029700.v1.1.491

Sequence Viewer

Length: 1626 bp
ATGGGGGAGCTGGATAATTCCTCATCGCCGTTACTGACGGTTTCAACGGCTTCCGGCGGGGAAGCCAGTTTAACTTCCTCCACTCACGAAGCCATGACTCATCCGGAGCCGCAGCAAAAGAAAAAGCGAAACCTTCCAGGAATGCCAGATCCCGAAGCGGAGGTGATCGCGCTGTCGCCGACGACTCTCCTCGCAACGAACCGTTTCGTGTGTGAGATCTGCAGCAAAGGCTTCCAGCGCGACCAGAACCTGCAGCTCCACCGGCGGGGCCACAACCTGCCGTGGAAGCTGAAGCAACGGACGAGCAAAGAAGTACGGAAGCGGGTCTACGTCTGCCCCGAGACCTCCTGCGTGCACCACCACCCCACTCGGGCGCTCGGAGACCTGACGGGTATCAAGAAGCACTTTTGTCGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAGCGGTGCTCCAAGAAATACGCCGTGCAGTCCGATTGGAAGGCGCACATGAAGACTTGCGGCACCCGAGAGTACAAATGCGATTGCGGAACTTTATTCTCTAGGAGGGATAGCTTCATAACGCACAGGGCGTTCTGCGACGCGTTGGCGGAGGAGAGCGCGAAGACTCAAACCCTAGTGATTGGGCCCGACGGAAGTATGAACCCGAATTCAAATCCAACTCCGAGTGCGAGGAGTGGGGTGGTGGCGTCGCCGCCTCCACCGCCTCACACACCGTCAAACACCGTGGTGTCTCCGGCCTTGTCTATTCAGAGCTCAGATTTGCCAGAGAACCCAATTGGCCTGTCCCCTCCGGCGCCGGCCACGTCATGCTTAACTACTACGGCAATCAGCACCACCGCTACCGCCACCACCTCGACTGGAAATTGCAACAATGGTAGTAGTGTATTTGCAAGCATATTTGCACCTTCCTCCGCCTCAGCATTAATCATACAGCCACCAGGCCCACCACAAACATCGCCACCGTCCTCATTCTCCAATCAAGTATCTGCATTGGGCCGGCCAGATGGCTCTACTAAAATTTCCTCCGTTAGCGAACCCACATCACTGTCTCTCTCCTCCTCTCTTTACCTCTCCAGCAATGGCTCCTCACTCTTCCCAACACCTGATCAAGACCACCGCAACTATGCCCAGCCCGCTGCCATGTCCGCCACGGCATTGCTCCAAAAGGCAGCCCAAATGGGTGCTGCGACATCGAACGCCTCACTGCTTCGTGGGTTGGGGTTGTCCACGACCTCATCCCCGTCTCAAGAAAATAGCACAACATTGCAGTGGAACAAGGAGCAAGAGAGTGGTGGTGCTGCCCACGTGGGGGCCGAGCTAGGGCTTGAACTTCTCTCAACTGCAAATGCTGCCGAATTGACTGATCTAATGATGGGTCCGCCTTCGTCGTTCGGGGGCCAGCCCATGACTCGTGACCTTCTTGGGCTGAGCATCGGTAATGGTGGTGGAGGTGGCGCTTCCGCAGCTGGATTTTCTGCTTTCCTAAATTCCTTCGGTGGCAGCGGCGGTGCCTTAAATGTTGCAACTGCATACGGAAGTGGTGGCGGCGGAGGTGGGAGTTCGCAGCGAGAAACGTGGGAAGGTGCACAAGATAGAAAGCCCGATAGGTCTTCATTGCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz zf-met

Protein Analysis

542

Amino Acids

56.41

Weight (kDa)

8.62

Isoelectric Point (pI)

50.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 106 - 140 1.8e-20 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 144 - 168 3.2e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 171 - 207 1.2e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013791)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g40030
malus_domestica MD08G1033100.v1.1 MD15G1029700.v1.1
prunus_persica Prupe.1G381800_v2.0.a1
pyrus_communis pycom08g02620 pycom12g10450 pycom15g02610
rosa_chinensis RchiOBHm_Chr6g0300721
rosa_laevigata RLG00000011308
rosa_multiflora Rmu_co8477681.1_g000001
rosa_roxburghii Rroxscaffold_7G00167480
rosa_rugosa Rorug06G0298700
rosa_samantha Rh6AG411300 Rh6BG418600 Rh6CG426000 Rh6DG411500
rosa_wichuraiana Rw6G036000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 258, 285
AccB1I GGYRCC 3 cut(s) 503, 796, 1511
AccBSI CCGCTC 1 cut(s) 445
AccI GTMKAC 1 cut(s) 327
AccII CGCG 4 cut(s) 170, 240, 584, 602
AccIII TCCGGA 1 cut(s) 103
AclWI GGATC 1 cut(s) 143
AcoI YGGCCR 2 cut(s) 801, 1001
AcsI RAATTY 3 cut(s) 649, 1020, 1489
AcuI CTGAAG 1 cut(s) 311
AcvI CACGTG 1 cut(s) 1309
AcyI GRCGYC 2 cut(s) 689, 797
AfaI GTAC 2 cut(s) 315, 515
AfiI CCNNNNNNNGG 5 cut(s) 265, 370, 1311, 1312, 1323
AflIII ACRYGT 1 cut(s) 582
AgsI TTSAA 3 cut(s) 45, 654, 1331
AjiI CACGTC 1 cut(s) 807
AjnI CCWGG 2 cut(s) 136, 940
AleI CACNNNNGTG 1 cut(s) 728
AluBI AGCT 7 cut(s) 10, 256, 289, 555, 756, 1321, 1469
AluI AGCT 7 cut(s) 10, 256, 289, 555, 756, 1321, 1469
Alw21I GWGCWC 4 cut(s) 357, 452, 758, 1591
Alw26I GTCTC 5 cut(s) 335, 375, 738, 1056, 1251
Alw44I GTGCAC 2 cut(s) 353, 1587
AlwI GGATC 1 cut(s) 143
AlwNI CAGNNNCTG 1 cut(s) 250
Ama87I CYCGRG 3 cut(s) 338, 369, 507
Aor13HI TCCGGA 1 cut(s) 103
ApaI GGGCCC 1 cut(s) 630
ApaLI GTGCAC 2 cut(s) 353, 1587
ApoI RAATTY 3 cut(s) 649, 1020, 1489
AseI ATTAAT 1 cut(s) 926
Asp700I GAANNNNTTC 1 cut(s) 203
AspLEI GCGC 7 cut(s) 172, 240, 376, 487, 602, 799, 1460
AspS9I GGNCC 8 cut(s) 268, 626, 627, 944, 997, 1314, 1379, 1399
AsuHPI GGTGA 1 cut(s) 175
AvaI CYCGRG 3 cut(s) 338, 369, 507
AvaII GGWCC 1 cut(s) 1379
BaeGI GKGCMC 3 cut(s) 357, 630, 1591
BanI GGYRCC 3 cut(s) 503, 796, 1511
BanII GRGCYC 2 cut(s) 630, 758
BarI GAAGNNNNNNTAC 2 cut(s) 311, 343
BauI CACGAG 1 cut(s) 1413
BbrPI CACGTG 1 cut(s) 1309
BbsI GAAGAC 3 cut(s) 500, 611, 1605
Bbv12I GWGCWC 4 cut(s) 357, 452, 758, 1591
BbvCI CCTCAGC 1 cut(s) 919
BccI CCATC 2 cut(s) 1001, 1369
BceAI ACGGC 7 cut(s) 13, 63, 265, 436, 449, 840, 1170
BcgI CGANNNNNNTGC 2 cut(s) 392, 426
BciT130I CCWGG 2 cut(s) 138, 942
BclI TGATCA 1 cut(s) 1108
BcoDI GTCTC 5 cut(s) 335, 375, 738, 1056, 1251
BfaI CTAG 4 cut(s) 543, 617, 1322, 1624
BfmI CTRYAG 2 cut(s) 220, 251
BfoI RGCGCY 3 cut(s) 377, 800, 1461
BfuAI ACCTGC 2 cut(s) 258, 285
BglII AGATCT 1 cut(s) 216
BlpI GCTNAGC 1 cut(s) 1430
Bme1390I CCNGG 2 cut(s) 138, 942
Bme18I GGWCC 1 cut(s) 1379
BmeT110I CYCGRG 3 cut(s) 338, 369, 507
BmgBI CACGTC 1 cut(s) 807
BmgT120I GGNCC 8 cut(s) 268, 626, 627, 944, 997, 1314, 1379, 1399
BmrFI CCNGG 2 cut(s) 138, 942
BmsI GCATC 1 cut(s) 1443
BpiI GAAGAC 3 cut(s) 500, 611, 1605
BplI GAGNNNNNCTC 2 cut(s) 434, 466
BpmI CTGGAG 1 cut(s) 1060
Bpu10I CCTNAGC 1 cut(s) 919
Bpu1102I GCTNAGC 1 cut(s) 1430
BpuEI CTTGAG 1 cut(s) 1233
BsaAI YACGTR 1 cut(s) 1309
BsaHI GRCGYC 2 cut(s) 689, 797
BsaI GGTCTC 2 cut(s) 335, 375
BsaJI CCNNGG 3 cut(s) 281, 726, 1152
BsaWI WCCGGW 1 cut(s) 103
Bsc4I CCNNNNNNNGG 5 cut(s) 265, 370, 1311, 1312, 1323
Bse118I RCCGGY 3 cut(s) 261, 799, 999
Bse1I ACTGG 2 cut(s) 66, 865
Bse3DI GCAATG 4 cut(s) 1087, 1157, 1265, 1616
BseAI TCCGGA 1 cut(s) 103
BseBI CCWGG 2 cut(s) 138, 942
BseDI CCNNGG 3 cut(s) 281, 726, 1152
BseGI GGATG 2 cut(s) 100, 1238
BseLI CCNNNNNNNGG 5 cut(s) 265, 370, 1311, 1312, 1323
BseMI GCAATG 4 cut(s) 1087, 1157, 1265, 1616
BseMII CTCAG 3 cut(s) 771, 933, 1421
BseNI ACTGG 2 cut(s) 66, 865
BseRI GAGGAG 6 cut(s) 179, 608, 688, 1048, 1051, 1078
BseSI GKGCMC 3 cut(s) 357, 630, 1591
BseYI CCCAGC 1 cut(s) 1131
BsgI GTGCAG 1 cut(s) 488
Bsh1236I CGCG 4 cut(s) 170, 240, 584, 602
BshNI GGYRCC 3 cut(s) 503, 796, 1511
BsiHKAI GWGCWC 4 cut(s) 357, 452, 758, 1591
BsiHKCI CYCGRG 3 cut(s) 338, 369, 507
BsiSI CCGG 7 cut(s) 54, 104, 262, 737, 794, 800, 1000
BslFI GGGAC 1 cut(s) 772
BslI CCNNNNNNNGG 5 cut(s) 265, 370, 1311, 1312, 1323
BsmAI GTCTC 5 cut(s) 335, 375, 738, 1056, 1251
BsmBI CGTCTC 1 cut(s) 1251
BsmFI GGGAC 1 cut(s) 772
BsmI GAATGC 1 cut(s) 147
Bso31I GGTCTC 2 cut(s) 335, 375
BsoBI CYCGRG 3 cut(s) 338, 369, 507
Bsp120I GGGCCC 1 cut(s) 626
Bsp1286I GDGCHC 5 cut(s) 357, 452, 630, 758, 1591
Bsp13I TCCGGA 1 cut(s) 103
Bsp143I GATC 5 cut(s) 148, 165, 216, 1108, 1366
Bsp1720I GCTNAGC 1 cut(s) 1430
BspCNI CTCAG 3 cut(s) 770, 932, 1422
BspEI TCCGGA 1 cut(s) 103
BspFNI CGCG 4 cut(s) 170, 240, 584, 602
BspMAI CTGCAG 2 cut(s) 224, 255
BspMI ACCTGC 2 cut(s) 258, 285
BspPI GGATC 1 cut(s) 143
BspT107I GGYRCC 3 cut(s) 503, 796, 1511
BspTNI GGTCTC 2 cut(s) 335, 375
BsrBI CCGCTC 1 cut(s) 445
BsrDI GCAATG 4 cut(s) 1087, 1157, 1265, 1616
BsrFI RCCGGY 3 cut(s) 261, 799, 999
BsrI ACTGG 2 cut(s) 66, 865
BssAI RCCGGY 3 cut(s) 261, 799, 999
BssECI CCNNGG 3 cut(s) 281, 726, 1152
BssMI GATC 5 cut(s) 148, 165, 216, 1108, 1366
BssNI GRCGYC 2 cut(s) 689, 797
BssSI CACGAG 1 cut(s) 1413
Bst2BI CACGAG 1 cut(s) 1413
Bst2UI CCWGG 2 cut(s) 138, 942
Bst4CI ACNGT 6 cut(s) 40, 203, 717, 727, 966, 1050
Bst6I CTCTTC 1 cut(s) 1100
BstACI GRCGYC 2 cut(s) 689, 797
BstAPI GCANNNNNTGC 1 cut(s) 1352
BstBAI YACGTR 1 cut(s) 1309
BstC8I GCNNGC 7 cut(s) 353, 443, 801, 895, 1001, 1137, 1403
BstDEI CTNAG 3 cut(s) 757, 919, 1430
BstDSI CCRYGG 3 cut(s) 281, 726, 1152
BstF5I GGATG 2 cut(s) 100, 1238
BstFNI CGCG 4 cut(s) 170, 240, 584, 602
BstH2I RGCGCY 3 cut(s) 377, 800, 1461
BstHHI GCGC 7 cut(s) 172, 240, 376, 487, 602, 799, 1460
BstKTI GATC 5 cut(s) 151, 168, 219, 1111, 1369
BstMAI GTCTC 5 cut(s) 335, 375, 738, 1056, 1251
BstMBI GATC 5 cut(s) 148, 165, 216, 1108, 1366
BstNI CCWGG 2 cut(s) 138, 942
BstSCI CCNGG 2 cut(s) 136, 940
BstSFI CTRYAG 2 cut(s) 220, 251
BstSLI GKGCMC 3 cut(s) 357, 630, 1591
BstUI CGCG 4 cut(s) 170, 240, 584, 602
BstV2I GAAGAC 3 cut(s) 500, 611, 1605
BstX2I RGATCY 2 cut(s) 148, 216
BstYI RGATCY 2 cut(s) 148, 216
BtgI CCRYGG 3 cut(s) 281, 726, 1152
BtgZI GCGATG 2 cut(s) 9, 942
BtrI CACGTC 1 cut(s) 807
BtsCI GGATG 2 cut(s) 100, 1238
BtsI GCAGTG 2 cut(s) 1205, 1277
BtsIMutI CAGTG 3 cut(s) 1046, 1205, 1277
BveI ACCTGC 2 cut(s) 258, 285
Cac8I GCNNGC 7 cut(s) 353, 443, 801, 895, 1001, 1137, 1403
CaiI CAGNNNCTG 1 cut(s) 250
CfoI GCGC 7 cut(s) 172, 240, 376, 487, 602, 799, 1460
Cfr10I RCCGGY 3 cut(s) 261, 799, 999
Cfr13I GGNCC 8 cut(s) 268, 626, 627, 944, 997, 1314, 1379, 1399
CseI GACGC 2 cut(s) 590, 678
Csp6I GTAC 2 cut(s) 314, 514
CspCI CAANNNNNGTGG 2 cut(s) 708, 743
CviAII CATG 5 cut(s) 94, 490, 810, 1144, 1408
CviQI GTAC 2 cut(s) 314, 514
DdeI CTNAG 3 cut(s) 757, 919, 1430
DinI GGCGCC 1 cut(s) 798
DpnI GATC 5 cut(s) 150, 167, 218, 1110, 1368
DpnII GATC 5 cut(s) 148, 165, 216, 1108, 1366
EaeI YGGCCR 2 cut(s) 801, 1001
Eam1104I CTCTTC 1 cut(s) 1100
EarI CTCTTC 1 cut(s) 1100
EciI GGCGGA 5 cut(s) 605, 904, 1138, 1371, 1566
Ecl136II GAGCTC 1 cut(s) 756
Eco24I GRGCYC 2 cut(s) 630, 758
Eco31I GGTCTC 2 cut(s) 335, 375
Eco47I GGWCC 1 cut(s) 1379
Eco53kI GAGCTC 1 cut(s) 756
Eco57I CTGAAG 1 cut(s) 311
Eco72I CACGTG 1 cut(s) 1309
Eco88I CYCGRG 3 cut(s) 338, 369, 507
EcoICRI GAGCTC 1 cut(s) 756
EcoRI GAATTC 1 cut(s) 649
EcoRII CCWGG 2 cut(s) 136, 940
EcoT38I GRGCYC 2 cut(s) 630, 758
EgeI GGCGCC 1 cut(s) 798
EheI GGCGCC 1 cut(s) 798
Esp3I CGTCTC 1 cut(s) 1251
FaeI CATG 5 cut(s) 97, 493, 813, 1147, 1411
FalI AAGNNNNNCTT 2 cut(s) 389, 421
FaqI GGGAC 1 cut(s) 772
FatI CATG 5 cut(s) 93, 489, 809, 1143, 1407
FauI CCCGC 4 cut(s) 50, 258, 315, 1144
FbaI TGATCA 1 cut(s) 1108
FblI GTMKAC 1 cut(s) 327
FokI GGATG 2 cut(s) 87, 1225
FriOI GRGCYC 2 cut(s) 630, 758
FseI GGCCGGCC 1 cut(s) 1003
FspBI CTAG 4 cut(s) 543, 617, 1322, 1624
GlaI GCGC 7 cut(s) 171, 239, 375, 486, 601, 798, 1459
GsaI CCCAGC 1 cut(s) 1135
GsuI CTGGAG 1 cut(s) 1060
HaeII RGCGCY 3 cut(s) 377, 800, 1461
HapII CCGG 7 cut(s) 54, 104, 262, 737, 794, 800, 1000
HgaI GACGC 2 cut(s) 590, 678
HhaI GCGC 7 cut(s) 172, 240, 376, 487, 602, 799, 1460
Hin1I GRCGYC 2 cut(s) 689, 797
Hin1II CATG 5 cut(s) 97, 493, 813, 1147, 1411
Hin6I GCGC 7 cut(s) 170, 238, 374, 485, 600, 797, 1458
HinP1I GCGC 7 cut(s) 170, 238, 374, 485, 600, 797, 1458
HinfI GANTC 4 cut(s) 97, 184, 607, 1411
HpaII CCGG 7 cut(s) 54, 104, 262, 737, 794, 800, 1000
HphI GGTGA 1 cut(s) 175
Hpy166II GTNNAC 4 cut(s) 328, 355, 1230, 1589
Hpy188I TCNGA 5 cut(s) 380, 475, 666, 753, 760
Hpy188III TCNNGA 7 cut(s) 86, 104, 152, 397, 1112, 1250, 1415
Hpy8I GTNNAC 4 cut(s) 328, 355, 1230, 1589
Hpy99I CGWCG 5 cut(s) 184, 584, 635, 694, 1393
HpyAV CCTTC 7 cut(s) 143, 475, 918, 1395, 1430, 1504, 1577
HpyCH4III ACNGT 6 cut(s) 40, 203, 717, 727, 966, 1050
HpyCH4IV ACGT 4 cut(s) 330, 806, 1308, 1577
HpyF3I CTNAG 3 cut(s) 757, 919, 1430
HpySE526I ACGT 4 cut(s) 330, 806, 1308, 1577
Hsp92I GRCGYC 2 cut(s) 689, 797
Hsp92II CATG 5 cut(s) 97, 493, 813, 1147, 1411
HspAI GCGC 7 cut(s) 170, 238, 374, 485, 600, 797, 1458
KasI GGCGCC 1 cut(s) 796
Kpn2I TCCGGA 1 cut(s) 103
KroI GCCGGC 2 cut(s) 799, 999
KroNI GCCGGC 2 cut(s) 801, 1001
Ksp22I TGATCA 1 cut(s) 1108
Kzo9I GATC 5 cut(s) 148, 165, 216, 1108, 1366
LmnI GCTCC 7 cut(s) 7, 106, 261, 455, 1091, 1167, 1282
LweI GCATC 1 cut(s) 1443
MaeI CTAG 4 cut(s) 543, 617, 1322, 1624
MaeII ACGT 4 cut(s) 330, 806, 1308, 1577
MaeIII GTNAC 2 cut(s) 30, 1415
MalI GATC 5 cut(s) 150, 167, 218, 1110, 1368
MbiI CCGCTC 1 cut(s) 445
MboI GATC 5 cut(s) 148, 165, 216, 1108, 1366
MboII GAAGA 5 cut(s) 439, 505, 616, 1087, 1605
MfeI CAATTG 1 cut(s) 777
MflI RGATCY 2 cut(s) 148, 216
MhlI GDGCHC 5 cut(s) 357, 452, 630, 758, 1591
MluCI AATT 7 cut(s) 16, 649, 777, 865, 1020, 1358, 1489
MluI ACGCGT 1 cut(s) 582
Mly113I GGCGCC 1 cut(s) 797
MlyI GAGTC 4 cut(s) 91, 178, 601, 1405
MmeI TCCRAC 1 cut(s) 683
MroI TCCGGA 1 cut(s) 103
MroNI GCCGGC 2 cut(s) 799, 999
MroXI GAANNNNTTC 1 cut(s) 203
MseI TTAA 4 cut(s) 71, 815, 926, 1517
MslI CAYNNNNRTG 2 cut(s) 728, 1270
MspA1I CMGCKG 3 cut(s) 1139, 1469, 1506
MspI CCGG 7 cut(s) 54, 104, 262, 737, 794, 800, 1000
MspR9I CCNGG 2 cut(s) 138, 942
MunI CAATTG 1 cut(s) 777
Mva1269I GAATGC 1 cut(s) 147
MvaI CCWGG 2 cut(s) 138, 942
MvnI CGCG 4 cut(s) 170, 240, 584, 602
NaeI GCCGGC 2 cut(s) 801, 1001
NarI GGCGCC 1 cut(s) 797
NdeII GATC 5 cut(s) 148, 165, 216, 1108, 1366
NgoMIV GCCGGC 2 cut(s) 799, 999
NlaIII CATG 5 cut(s) 97, 493, 813, 1147, 1411
NmeAIII GCCGAG 1 cut(s) 1342
NmuCI GTSAC 1 cut(s) 1415
OliI CACNNNNGTG 1 cut(s) 728
PcsI WCGNNNNNNNCGW 3 cut(s) 336, 569, 1314
PctI GAATGC 1 cut(s) 147
PdiI GCCGGC 2 cut(s) 801, 1001
PdmI GAANNNNTTC 1 cut(s) 203
PfoI TCCNGGA 1 cut(s) 136
PleI GAGTC 4 cut(s) 91, 178, 601, 1405
PluTI GGCGCC 1 cut(s) 800
PmaCI CACGTG 1 cut(s) 1309
PmlI CACGTG 1 cut(s) 1309
PpsI GAGTC 4 cut(s) 91, 178, 601, 1405
Ppu21I YACGTR 1 cut(s) 1309
PshBI ATTAAT 1 cut(s) 926
Psp124BI GAGCTC 1 cut(s) 758
Psp6I CCWGG 2 cut(s) 136, 940
PspCI CACGTG 1 cut(s) 1309
PspFI CCCAGC 1 cut(s) 1131
PspGI CCWGG 2 cut(s) 136, 940
PspOMI GGGCCC 1 cut(s) 626
PspPI GGNCC 8 cut(s) 268, 626, 627, 944, 997, 1314, 1379, 1399
PstI CTGCAG 2 cut(s) 224, 255
PstNI CAGNNNCTG 1 cut(s) 250
PsuI RGATCY 2 cut(s) 148, 216
PvuII CAGCTG 1 cut(s) 1469
RigI GGCCGGCC 1 cut(s) 1003
RsaI GTAC 2 cut(s) 315, 515
RsaNI GTAC 2 cut(s) 314, 514
RseI CAYNNNNRTG 2 cut(s) 728, 1270
SacI GAGCTC 1 cut(s) 758
SaqAI TTAA 4 cut(s) 71, 815, 926, 1517
Sau3AI GATC 5 cut(s) 148, 165, 216, 1108, 1366
Sau96I GGNCC 8 cut(s) 268, 626, 627, 944, 997, 1314, 1379, 1399
SchI GAGTC 4 cut(s) 91, 178, 601, 1405
ScrFI CCNGG 2 cut(s) 138, 942
SduI GDGCHC 5 cut(s) 357, 452, 630, 758, 1591
SfaNI GCATC 1 cut(s) 1443
SfcI CTRYAG 2 cut(s) 220, 251
SfoI GGCGCC 1 cut(s) 798
SgrAI CRCCGGYG 1 cut(s) 261
SinI GGWCC 1 cut(s) 1379
SmiMI CAYNNNNRTG 2 cut(s) 728, 1270
SmlI CTYRAG 1 cut(s) 1248
SmoI CTYRAG 1 cut(s) 1248
Sse9I AATT 7 cut(s) 16, 649, 777, 865, 1020, 1358, 1489
SspDI GGCGCC 1 cut(s) 796
SspMI CTAG 4 cut(s) 543, 617, 1322, 1624
SstI GAGCTC 1 cut(s) 758
StyD4I CCNGG 2 cut(s) 136, 940
TaaI ACNGT 6 cut(s) 40, 203, 717, 727, 966, 1050
TaiI ACGT 4 cut(s) 333, 809, 1311, 1580
TaqI TCGA 3 cut(s) 412, 857, 1196
TasI AATT 7 cut(s) 16, 649, 777, 865, 1020, 1358, 1489
TatI WGTACW 1 cut(s) 513
TauI GCSGC 5 cut(s) 112, 504, 697, 1509, 1551
Tru1I TTAA 4 cut(s) 71, 815, 926, 1517
Tru9I TTAA 4 cut(s) 71, 815, 926, 1517
TscAI CASTG 3 cut(s) 1053, 1212, 1277
TseFI GTSAC 1 cut(s) 1415
Tsp45I GTSAC 1 cut(s) 1415
TspDTI ATGAA 4 cut(s) 506, 547, 656, 1605
TspGWI ACGGA 5 cut(s) 313, 331, 648, 1018, 1551
TspRI CASTG 3 cut(s) 1053, 1212, 1277
VneI GTGCAC 2 cut(s) 353, 1587
VpaK11BI GGWCC 1 cut(s) 1379
VspI ATTAAT 1 cut(s) 926
XapI RAATTY 3 cut(s) 649, 1020, 1489
XmiI GTMKAC 1 cut(s) 327
XmnI GAANNNNTTC 1 cut(s) 203
XspI CTAG 4 cut(s) 543, 617, 1322, 1624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.