RLG00000011308

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0013791
Physical Location & Seq
Forward (+)
8445760 .. 8448387
2628 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011308

Sequence Viewer

Length: 1554 bp
ATGGGCGACCTTGACAATTCTTCATCACTAGTTGGTTCTACCGCTTCGGGAGAAGCTACTTTTTCGGAGCCTCCTGCCAAGAAGAAGCGAAATCTTCCCGGAATGCCAGATCCTGAAGCGGAGGTGATCGCTCTGTCGCCGAAAACTCTGATGGCGACGAACCGTTTCGTGTGCGAGATCTGCAACAAAGGGTTCCAGCGCGACCAGAACCTCCAGCTCCACCGGCGAGGCCACAACCTGCCGTGGAAGCTGAGGCAGCGAACCACGACGGAGGTTCGGAAGCGGGTTTACGTCTGCCCCGAGACGTCGTGCGTGCACCACAACCCGACCCGAGCGCTGGGCGATCTCACCGGGATTAAGAAGCACTTTTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAGCGGTGCTCGAAGAAGTACGCGGTGCAATCTGATTGGAAGGCGCACATGAAGACCTGCGGCACTAGAGAGTACAAATGTGATTGTGGAACTTTGTTCTCTAGGAGGGATAGCTTCATAACGCATAGGGCTTTCTGTGACGCCTTGGCCGAGGAGAGTGCTAAGGCTCAAACCCTAGGAAGCTCGCAGCTGGCAAATCCGAACACGAATGCTGGAAAGGCGGTTGTGGTGGCATCGCCGCCTCCACCGCCTCTCACTCCTTCCAATAATGTGGTGTCTCCAGCTCTATCCATTCAAAGCTCAGAATTCCCAGAAAACGCAGTAGGACTGTCGCCGCCACCTCCGGCAACCACGTGCTTAACGAGTACCACGACGGCGATTAGCACCACCGCCACCACCACCACCTCAACCGGAAATTGCAGCAACACTAGTACTAGTGTATTTGCTAGCATATTTGCTCCTTCTAGTACTGCCTCACAAACATCAGCAGCTGCTAATTCCTCATACTCCAATATAGTCTCCAGTTCTGCAATCCCATCAGTCTCCGCCATGGAACCAACGTCTCTCTCACTCTCCACCTCTCTATACCTATCCAACAATGGCTCCACCCTCTTCCCAACTGCTGATCAGCAAGACCATCGCCAGTATGTAGCTTCTCCTCAGGCTCCAGCCATGTCCGCCACTGCATTGCTCCAAAAAGCAGCCCAAATGGGTGCAGCTGCGACTAGTGGGTCTTTTCTTCGTGGCTTTGGCTTGGCCACGTCCTCATCGCCGCCCCAGGCGCAAGATAGCACCACCTCTTTGCAGTGGAGCAACAACAGCCACTGCCAGCAGCACAAGAGAGATGGTAGTGGTGGTGCTGCTGCCACAGTAGCGGCTGGGCTTGGAGCAAGTTCTGCCCTCTTGACTGATCTCATGATGGGCCCACCGGTGCCGTTTGGGGGTCATCATCAGCCCATGACCCGCGACCTTCTTGGGCTAGGTATAGGTGCTAATGGCGGGGGTGGCAGTGCTTCATCCGCCGGTCTATCTGCTTTGCTCAATTCGTTCGGCGGTGGAGGTTATACTACATATGCAAGGGGAGAAGAGTCATCATGGGAAGGTGCACAGGAGAGGAAACCTAATACCGCCAATGGCCCAGCCTTGCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz zf-met

Protein Analysis

518

Amino Acids

54.01

Weight (kDa)

9.01

Isoelectric Point (pI)

50.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 93 - 127 1.5e-21 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 131 - 155 3.1e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 158 - 195 1.7e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013791)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g40030
malus_domestica MD08G1033100.v1.1 MD15G1029700.v1.1
prunus_persica Prupe.1G381800_v2.0.a1
pyrus_communis pycom08g02620 pycom12g10450 pycom15g02610
rosa_chinensis RchiOBHm_Chr6g0300721
rosa_laevigata RLG00000011308
rosa_multiflora Rmu_co8477681.1_g000001
rosa_roxburghii Rroxscaffold_7G00167480
rosa_rugosa Rorug06G0298700
rosa_samantha Rh6AG411300 Rh6BG418600 Rh6CG426000 Rh6DG411500
rosa_wichuraiana Rw6G036000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1132
AatII GACGTC 1 cut(s) 308
Acc36I ACCTGC 2 cut(s) 246, 467
AccB1I GGYRCC 1 cut(s) 1333
AccBSI CCGCTC 1 cut(s) 406
AccII CGCG 3 cut(s) 201, 425, 1368
AclWI GGATC 1 cut(s) 104
AcoI YGGCCR 2 cut(s) 549, 1158
AcsI RAATTY 1 cut(s) 707
AcuI CTGAAG 1 cut(s) 135
AcvI CACGTG 1 cut(s) 756
AcyI GRCGYC 2 cut(s) 305, 543
AfaI GTAC 5 cut(s) 422, 476, 769, 835, 871
AfeI AGCGCT 1 cut(s) 336
AfiI CCNNNNNNNGG 2 cut(s) 337, 1343
AgeI ACCGGT 1 cut(s) 1330
AgsI TTSAA 1 cut(s) 698
AhlI ACTAGT 4 cut(s) 28, 830, 836, 1127
AjiI CACGTC 1 cut(s) 1164
AjnI CCWGG 1 cut(s) 1179
Alw21I GWGCWC 3 cut(s) 318, 413, 1510
Alw26I GTCTC 5 cut(s) 296, 684, 925, 949, 969
Alw44I GTGCAC 2 cut(s) 314, 1506
AlwI GGATC 1 cut(s) 104
AlwNI CAGNNNCTG 3 cut(s) 113, 893, 1227
Ama87I CYCGRG 2 cut(s) 299, 330
Aor51HI AGCGCT 1 cut(s) 336
AoxI GGCC 5 cut(s) 229, 549, 1158, 1324, 1537
ApaI GGGCCC 1 cut(s) 1328
ApaLI GTGCAC 2 cut(s) 314, 1506
ApoI RAATTY 1 cut(s) 707
AsiGI ACCGGT 1 cut(s) 1330
Asp700I GAANNNNTTC 1 cut(s) 164
AspA2I CCTAGG 1 cut(s) 577
AspLEI GCGC 4 cut(s) 201, 337, 448, 1186
AspS9I GGNCC 3 cut(s) 1324, 1325, 1538
AsuC2I CCSGG 2 cut(s) 99, 352
AsuHPI GGTGA 2 cut(s) 136, 340
AsuNHI GCTAGC 1 cut(s) 848
AvaI CYCGRG 2 cut(s) 299, 330
AvrII CCTAGG 1 cut(s) 577
AxyI CCTNAGG 1 cut(s) 1062
BaeGI GKGCMC 3 cut(s) 318, 1328, 1510
BalI TGGCCA 1 cut(s) 1160
BanI GGYRCC 1 cut(s) 1333
BanII GRGCYC 1 cut(s) 1328
BarI GAAGNNNNNNTAC 2 cut(s) 272, 304
BbrPI CACGTG 1 cut(s) 756
BbsI GAAGAC 1 cut(s) 461
Bbv12I GWGCWC 3 cut(s) 318, 413, 1510
BbvCI CCTCAGC 1 cut(s) 251
BccI CCATC 5 cut(s) 145, 946, 1047, 1241, 1315
BceAI ACGGC 4 cut(s) 226, 397, 792, 1321
BcgI CGANNNNNNTGC 4 cut(s) 542, 576, 1022, 1056
BciT130I CCWGG 1 cut(s) 1181
BclI TGATCA 1 cut(s) 1027
BcnI CCSGG 2 cut(s) 99, 352
BcoDI GTCTC 5 cut(s) 296, 684, 925, 949, 969
BcuI ACTAGT 4 cut(s) 28, 830, 836, 1127
BfoI RGCGCY 1 cut(s) 338
BfuAI ACCTGC 2 cut(s) 246, 467
BglII AGATCT 1 cut(s) 177
BlnI CCTAGG 1 cut(s) 577
BmcAI AGTACT 2 cut(s) 835, 871
Bme1390I CCNGG 3 cut(s) 99, 352, 1181
BmeT110I CYCGRG 2 cut(s) 299, 330
BmgBI CACGTC 1 cut(s) 1164
BmgT120I GGNCC 3 cut(s) 1324, 1325, 1538
BmiI GGNNCC 7 cut(s) 69, 194, 957, 1006, 1068, 1326, 1335
BmrFI CCNGG 3 cut(s) 99, 352, 1181
BmsI GCATC 1 cut(s) 644
BmtI GCTAGC 1 cut(s) 852
BpiI GAAGAC 1 cut(s) 461
BplI GAGNNNNNCTC 2 cut(s) 395, 427
BpmI CTGGAG 4 cut(s) 197, 666, 907, 1053
Bpu10I CCTNAGC 2 cut(s) 251, 564
BpuMI CCSGG 2 cut(s) 99, 352
BsaAI YACGTR 1 cut(s) 756
BsaHI GRCGYC 2 cut(s) 305, 543
BsaJI CCNNGG 6 cut(s) 242, 546, 552, 577, 951, 1179
BsaWI WCCGGW 2 cut(s) 812, 1330
BsaXI ACNNNNNCTCC 2 cut(s) 989, 1019
Bsc4I CCNNNNNNNGG 2 cut(s) 337, 1343
Bse118I RCCGGY 3 cut(s) 222, 1330, 1424
Bse1I ACTGG 2 cut(s) 924, 1045
Bse21I CCTNAGG 1 cut(s) 1062
Bse3DI GCAATG 1 cut(s) 1088
BseBI CCWGG 1 cut(s) 1181
BseDI CCNNGG 6 cut(s) 242, 546, 552, 577, 951, 1179
BseGI GGATG 1 cut(s) 1418
BseLI CCNNNNNNNGG 2 cut(s) 337, 1343
BseMI GCAATG 1 cut(s) 1088
BseMII CTCAG 3 cut(s) 242, 717, 1076
BseNI ACTGG 2 cut(s) 924, 1045
BseRI GAGGAG 2 cut(s) 569, 1050
BseSI GKGCMC 3 cut(s) 318, 1328, 1510
BseYI CCCAGC 3 cut(s) 337, 1280, 1540
BsgI GTGCAG 1 cut(s) 1137
Bsh1236I CGCG 3 cut(s) 201, 425, 1368
BshFI GGCC 5 cut(s) 231, 551, 1160, 1326, 1539
BshNI GGYRCC 1 cut(s) 1333
BshTI ACCGGT 1 cut(s) 1330
BsiHKAI GWGCWC 3 cut(s) 318, 413, 1510
BsiHKCI CYCGRG 2 cut(s) 299, 330
BsiSI CCGG 7 cut(s) 99, 223, 351, 746, 813, 1331, 1425
BslI CCNNNNNNNGG 2 cut(s) 337, 1343
BsmAI GTCTC 5 cut(s) 296, 684, 925, 949, 969
BsmBI CGTCTC 2 cut(s) 296, 969
BsmI GAATGC 2 cut(s) 108, 616
BsnI GGCC 5 cut(s) 231, 551, 1160, 1326, 1539
BsoBI CYCGRG 2 cut(s) 299, 330
Bsp120I GGGCCC 1 cut(s) 1324
Bsp1286I GDGCHC 4 cut(s) 318, 413, 1328, 1510
Bsp143I GATC 6 cut(s) 109, 126, 177, 343, 1027, 1312
Bsp19I CCATGG 1 cut(s) 951
BspANI GGCC 5 cut(s) 231, 551, 1160, 1326, 1539
BspCNI CTCAG 3 cut(s) 243, 716, 1075
BspFNI CGCG 3 cut(s) 201, 425, 1368
BspHI TCATGA 1 cut(s) 1317
BspLI GGNNCC 7 cut(s) 69, 194, 957, 1006, 1068, 1326, 1335
BspMI ACCTGC 2 cut(s) 246, 467
BspOI GCTAGC 1 cut(s) 852
BspPI GGATC 1 cut(s) 104
BspT107I GGYRCC 1 cut(s) 1333
BsrBI CCGCTC 1 cut(s) 406
BsrDI GCAATG 1 cut(s) 1088
BsrFI RCCGGY 3 cut(s) 222, 1330, 1424
BsrI ACTGG 2 cut(s) 924, 1045
BssAI RCCGGY 3 cut(s) 222, 1330, 1424
BssECI CCNNGG 6 cut(s) 242, 546, 552, 577, 951, 1179
BssMI GATC 6 cut(s) 109, 126, 177, 343, 1027, 1312
BssNI GRCGYC 2 cut(s) 305, 543
BssT1I CCWWGG 3 cut(s) 546, 577, 951
Bst2UI CCWGG 1 cut(s) 1181
Bst4CI ACNGT 3 cut(s) 164, 732, 1273
Bst6I CTCTTC 2 cut(s) 1019, 1482
BstACI GRCGYC 2 cut(s) 305, 543
BstAPI GCANNNNNTGC 1 cut(s) 1298
BstBAI YACGTR 1 cut(s) 756
BstC8I GCNNGC 6 cut(s) 314, 404, 587, 594, 850, 1232
BstDEI CTNAG 4 cut(s) 251, 564, 703, 1062
BstDSI CCRYGG 2 cut(s) 242, 951
BstF5I GGATG 1 cut(s) 1418
BstFNI CGCG 3 cut(s) 201, 425, 1368
BstH2I RGCGCY 1 cut(s) 338
BstHHI GCGC 4 cut(s) 201, 337, 448, 1186
BstKTI GATC 6 cut(s) 112, 129, 180, 346, 1030, 1315
BstMAI GTCTC 5 cut(s) 296, 684, 925, 949, 969
BstMBI GATC 6 cut(s) 109, 126, 177, 343, 1027, 1312
BstNI CCWGG 1 cut(s) 1181
BstSCI CCNGG 3 cut(s) 97, 350, 1179
BstSLI GKGCMC 3 cut(s) 318, 1328, 1510
BstUI CGCG 3 cut(s) 201, 425, 1368
BstV2I GAAGAC 1 cut(s) 461
BstX2I RGATCY 2 cut(s) 109, 177
BstXI CCANNNNNNTGG 1 cut(s) 673
BstYI RGATCY 2 cut(s) 109, 177
Bsu36I CCTNAGG 1 cut(s) 1062
BsuRI GGCC 5 cut(s) 231, 551, 1160, 1326, 1539
BtgI CCRYGG 2 cut(s) 242, 951
BtgZI GCGATG 3 cut(s) 621, 1025, 1155
BtrI CACGTC 1 cut(s) 1164
BtsCI GGATG 1 cut(s) 1418
BtsI GCAGTG 4 cut(s) 1083, 1214, 1225, 1417
BtsIMutI CAGTG 4 cut(s) 1083, 1214, 1225, 1417
BveI ACCTGC 2 cut(s) 246, 467
Cac8I GCNNGC 6 cut(s) 314, 404, 587, 594, 850, 1232
CaiI CAGNNNCTG 3 cut(s) 113, 893, 1227
CciI TCATGA 1 cut(s) 1317
CfoI GCGC 4 cut(s) 201, 337, 448, 1186
Cfr10I RCCGGY 3 cut(s) 222, 1330, 1424
Cfr13I GGNCC 3 cut(s) 1324, 1325, 1538
CseI GACGC 1 cut(s) 551
Csp6I GTAC 5 cut(s) 421, 475, 768, 834, 870
CspAI ACCGGT 1 cut(s) 1330
CviAII CATG 6 cut(s) 451, 952, 1075, 1318, 1360, 1497
CviQI GTAC 5 cut(s) 421, 475, 768, 834, 870
DdeI CTNAG 4 cut(s) 251, 564, 703, 1062
DpnI GATC 6 cut(s) 111, 128, 179, 345, 1029, 1314
DpnII GATC 6 cut(s) 109, 126, 177, 343, 1027, 1312
DrdI GACNNNNNNGTC 1 cut(s) 1132
DseDI GACNNNNNNGTC 1 cut(s) 1132
EaeI YGGCCR 2 cut(s) 549, 1158
Eam1104I CTCTTC 2 cut(s) 1019, 1482
EarI CTCTTC 2 cut(s) 1019, 1482
EciI GGCGGA 3 cut(s) 937, 1069, 1411
Eco130I CCWWGG 3 cut(s) 546, 577, 951
Eco24I GRGCYC 1 cut(s) 1328
Eco47III AGCGCT 1 cut(s) 336
Eco57I CTGAAG 1 cut(s) 135
Eco72I CACGTG 1 cut(s) 756
Eco81I CCTNAGG 1 cut(s) 1062
Eco88I CYCGRG 2 cut(s) 299, 330
EcoRI GAATTC 1 cut(s) 707
EcoRII CCWGG 1 cut(s) 1179
EcoT14I CCWWGG 3 cut(s) 546, 577, 951
EcoT38I GRGCYC 1 cut(s) 1328
ErhI CCWWGG 3 cut(s) 546, 577, 951
Esp3I CGTCTC 2 cut(s) 296, 969
FaeI CATG 6 cut(s) 454, 955, 1078, 1321, 1363, 1500
FalI AAGNNNNNCTT 2 cut(s) 350, 382
FatI CATG 6 cut(s) 450, 951, 1074, 1317, 1359, 1496
FauI CCCGC 3 cut(s) 276, 1373, 1394
FauNDI CATATG 1 cut(s) 1474
FbaI TGATCA 1 cut(s) 1027
FokI GGATG 1 cut(s) 1405
FriOI GRGCYC 1 cut(s) 1328
GlaI GCGC 4 cut(s) 200, 336, 447, 1185
GsaI CCCAGC 3 cut(s) 341, 1284, 1544
GsuI CTGGAG 4 cut(s) 197, 666, 907, 1053
HaeII RGCGCY 1 cut(s) 338
HaeIII GGCC 5 cut(s) 231, 551, 1160, 1326, 1539
HapII CCGG 7 cut(s) 99, 223, 351, 746, 813, 1331, 1425
HgaI GACGC 1 cut(s) 551
HhaI GCGC 4 cut(s) 201, 337, 448, 1186
Hin1I GRCGYC 2 cut(s) 305, 543
Hin1II CATG 6 cut(s) 454, 955, 1078, 1321, 1363, 1500
Hin6I GCGC 4 cut(s) 199, 335, 446, 1184
HinP1I GCGC 4 cut(s) 199, 335, 446, 1184
HinfI GANTC 1 cut(s) 1490
HpaII CCGG 7 cut(s) 99, 223, 351, 746, 813, 1331, 1425
HphI GGTGA 2 cut(s) 136, 340
Hpy166II GTNNAC 3 cut(s) 289, 316, 1508
Hpy188I TCNGA 7 cut(s) 67, 150, 279, 436, 603, 706, 1553
Hpy188III TCNNGA 4 cut(s) 48, 113, 1306, 1318
Hpy8I GTNNAC 3 cut(s) 289, 316, 1508
Hpy99I CGWCG 4 cut(s) 160, 271, 310, 778
HpyAV CCTTC 5 cut(s) 436, 672, 873, 1382, 1496
HpyCH4III ACNGT 3 cut(s) 164, 732, 1273
HpyCH4IV ACGT 5 cut(s) 291, 305, 755, 962, 1163
HpyF3I CTNAG 4 cut(s) 251, 564, 703, 1062
HpySE526I ACGT 5 cut(s) 291, 305, 755, 962, 1163
Hsp92I GRCGYC 2 cut(s) 305, 543
Hsp92II CATG 6 cut(s) 454, 955, 1078, 1321, 1363, 1500
HspAI GCGC 4 cut(s) 199, 335, 446, 1184
Ksp22I TGATCA 1 cut(s) 1027
Kzo9I GATC 6 cut(s) 109, 126, 177, 343, 1027, 1312
LmnI GCTCC 8 cut(s) 67, 222, 865, 1010, 1072, 1098, 1212, 1289
LweI GCATC 1 cut(s) 644
MaeII ACGT 5 cut(s) 291, 305, 755, 962, 1163
MaeIII GTNAC 1 cut(s) 539
MalI GATC 6 cut(s) 111, 128, 179, 345, 1029, 1314
MbiI CCGCTC 1 cut(s) 406
MboI GATC 6 cut(s) 109, 126, 177, 343, 1027, 1312
MboII GAAGA 9 cut(s) 12, 86, 94, 400, 427, 466, 1006, 1133, 1499
MflI RGATCY 2 cut(s) 109, 177
MhlI GDGCHC 4 cut(s) 318, 413, 1328, 1510
MlsI TGGCCA 1 cut(s) 1160
MluCI AATT 5 cut(s) 16, 707, 817, 898, 1444
MluNI TGGCCA 1 cut(s) 1160
MlyI GAGTC 1 cut(s) 1499
MmeI TCCRAC 1 cut(s) 1020
Mox20I TGGCCA 1 cut(s) 1160
MroXI GAANNNNTTC 1 cut(s) 164
MscI TGGCCA 1 cut(s) 1160
MseI TTAA 2 cut(s) 357, 761
Msp20I TGGCCA 1 cut(s) 1160
MspA1I CMGCKG 3 cut(s) 592, 893, 1121
MspI CCGG 7 cut(s) 99, 223, 351, 746, 813, 1331, 1425
MspR9I CCNGG 3 cut(s) 99, 352, 1181
Mva1269I GAATGC 2 cut(s) 108, 616
MvaI CCWGG 1 cut(s) 1181
MvnI CGCG 3 cut(s) 201, 425, 1368
NciI CCSGG 2 cut(s) 99, 352
NcoI CCATGG 1 cut(s) 951
NdeI CATATG 1 cut(s) 1474
NdeII GATC 6 cut(s) 109, 126, 177, 343, 1027, 1312
NheI GCTAGC 1 cut(s) 848
NlaIII CATG 6 cut(s) 454, 955, 1078, 1321, 1363, 1500
NlaIV GGNNCC 7 cut(s) 69, 194, 957, 1006, 1068, 1326, 1335
NmeAIII GCCGAG 1 cut(s) 577
NmuCI GTSAC 1 cut(s) 539
PagI TCATGA 1 cut(s) 1317
PcsI WCGNNNNNNNCGW 4 cut(s) 297, 549, 761, 770
PctI GAATGC 2 cut(s) 108, 616
PdmI GAANNNNTTC 1 cut(s) 164
PfoI TCCNGGA 1 cut(s) 97
PinAI ACCGGT 1 cut(s) 1330
PleI GAGTC 1 cut(s) 1498
PmaCI CACGTG 1 cut(s) 756
PmlI CACGTG 1 cut(s) 756
PpsI GAGTC 1 cut(s) 1498
Ppu21I YACGTR 1 cut(s) 756
Psp6I CCWGG 1 cut(s) 1179
PspCI CACGTG 1 cut(s) 756
PspFI CCCAGC 3 cut(s) 337, 1280, 1540
PspGI CCWGG 1 cut(s) 1179
PspN4I GGNNCC 7 cut(s) 69, 194, 957, 1006, 1068, 1326, 1335
PspOMI GGGCCC 1 cut(s) 1324
PspPI GGNCC 3 cut(s) 1324, 1325, 1538
PstNI CAGNNNCTG 3 cut(s) 113, 893, 1227
PsuI RGATCY 2 cut(s) 109, 177
PvuII CAGCTG 3 cut(s) 592, 893, 1121
RsaI GTAC 5 cut(s) 422, 476, 769, 835, 871
RsaNI GTAC 5 cut(s) 421, 475, 768, 834, 870
SaqAI TTAA 2 cut(s) 357, 761
Sau3AI GATC 6 cut(s) 109, 126, 177, 343, 1027, 1312
Sau96I GGNCC 3 cut(s) 1324, 1325, 1538
ScaI AGTACT 2 cut(s) 835, 871
SchI GAGTC 1 cut(s) 1499
ScrFI CCNGG 3 cut(s) 99, 352, 1181
SduI GDGCHC 4 cut(s) 318, 413, 1328, 1510
SfaNI GCATC 1 cut(s) 644
SgrAI CRCCGGYG 2 cut(s) 222, 1330
SpeI ACTAGT 4 cut(s) 28, 830, 836, 1127
Sse9I AATT 5 cut(s) 16, 707, 817, 898, 1444
StyD4I CCNGG 3 cut(s) 97, 350, 1179
StyI CCWWGG 3 cut(s) 546, 577, 951
TaaI ACNGT 3 cut(s) 164, 732, 1273
TaiI ACGT 5 cut(s) 294, 308, 758, 965, 1166
TaqI TCGA 1 cut(s) 413
TasI AATT 5 cut(s) 16, 707, 817, 898, 1444
TatI WGTACW 3 cut(s) 474, 833, 869
TauI GCSGC 5 cut(s) 465, 643, 739, 1177, 1280
Tru1I TTAA 2 cut(s) 357, 761
Tru9I TTAA 2 cut(s) 357, 761
TscAI CASTG 4 cut(s) 1090, 1214, 1232, 1417
TseFI GTSAC 1 cut(s) 539
Tsp45I GTSAC 1 cut(s) 539
TspDTI ATGAA 4 cut(s) 12, 467, 508, 1407
TspGWI ACGGA 1 cut(s) 284
TspRI CASTG 4 cut(s) 1090, 1214, 1232, 1417
VneI GTGCAC 2 cut(s) 314, 1506
XapI RAATTY 1 cut(s) 707
XmaJI CCTAGG 1 cut(s) 577
XmnI GAANNNNTTC 1 cut(s) 164
ZraI GACGTC 1 cut(s) 306
ZrmI AGTACT 2 cut(s) 835, 871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.