pycom08g02620

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0013791
Physical Location & Seq
Reverse (-)
1927508 .. 1930948
3441 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g02620.1

Sequence Viewer

Length: 1599 bp
ATGGGGGAGCTGGATAATTCCTCATCGCCGTTACCGAAGGTTTCAACAGCTTCCGGCGGCGAAGCCAGTTTAACTTCCTCCGCTCGCGAAGCCATGACTCGTTCGGAGCCGCCGCAAAAGAAAAAGCGAAACCTTCCCGGAATGCCAGATCCCGAAGCGGATGTGATCGCGCTGTCGCCGACGACTCTGCTTGCTACGAACCGTTTCGTGTGCGAGATCTGCAGCAAAGGCTTCCAGCGGGACCAGAACCTGCAGCTCCACCGGCGGGGCCACAACCTGCCGTGGAAGCTGAAGCAGCGGACGAGCAAAGAAGTACGGAAGCGGGTCTACGTCTGCCCCGAGACCTCCTGCGTGCACCACAACCCGACCCGGGCGCTAGGCGACCTGACGGGGATTAAGAAGCACTTTTGTCGAAAGCACGGCGAGAAGAAGTGGCAGTGCGAGCGGTGCTCCAAGAAATACGCAGTGCAGTCCGATTGGAAGGCGCACATGAAGACGTGCGGCACCCGAGAGTACAAATGCGATTGCGGGACTTTATTCTCTAGGAGGGATAGCTTCATAACGCACAGGGCGTTCTGCGACGCTTTGGCGGAGGAGAGCGCGAAGGCTCAAACCCTAATGGTTGGGTCCGACGGAAGTACGAACCCGAGTTCAAATCCGACTCCGAGTGCGGTGGTGGCGTCGCCGCCTCCACCGCCTCACACACCGTCAAACACGGTGGTGTCTCCGGCCTTGTCTATTCAGAGCTCAGAATTGCCAGAAAACCCAATTGGCCTGTCCCCTCCGGCGCCAGCCACGACATGCTTAACTACCACGGCAATCAGCACCACCTCCATTGCCACCACCTCGACTGGAAATTGCAACAATGGTAGTAGTGTATTCGCCAGTGTATTTGCACCTTCCTCCACTTCAGCGTTGATGACACAGCCACCCCAAGCATCGTCACCGTCCTCATTCACCAATCAAGTATCCACATTGGGCCGCCTGGATGGCTCCACTACAACCTCCGCCATTAATGAACCCACATCACTCTCACTCTCTACCTCCCTTTACCTCTCCAGCAGTGGCTTCTCACTCTTTCCAACACCCGATCAACAAGACCACCGTGACTACGCTCAGCCCGCAGCCATGTCCGCCACGGCATTGCTCCAAAAGGCAGCCCAAATGGGTGCTGCAGCATCAAACGCCTCACTGCTTCGTGGGTTCGGGTTGTCCACGACCTCATCCGCGTCTCAAGAAAGTAGCACCACATTGCAGTGGAACAAGAAGCCAGAGAGTGGTGGTGGTGCTCACGTGGGAGCCGAGTTAGGGCTTCAACTTCTCTCAACTGCAAATGCTACCCAATTGAATGATCTAATGATGGGTCCACCTTCGTCGTTCGGGGGCCAGCCCATGACTCGTGACCTTCTTGGGCTGAGCATCGGTAGTGGTGATGGCGGTGGCGCTTCCACAGGCGGATTTTCTGCTTTCCTGAATTCCTTTGGAAGCAGCAGCGGTGCCTTCAATGTTGCAGCTCCGTACGGAAGTGGAGGAGCGGGCGGTGGAAGCTCGCAGGGAGAATCGTGGGAAGGTGCACAAGATAGAAAGCCCAACATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz zf-met

Protein Analysis

533

Amino Acids

55.52

Weight (kDa)

8.73

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 106 - 140 1.6e-21 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 144 - 168 2.8e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 171 - 209 7.7e-25 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013791)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g40030
malus_domestica MD08G1033100.v1.1 MD15G1029700.v1.1
prunus_persica Prupe.1G381800_v2.0.a1
pyrus_communis pycom08g02620 pycom12g10450 pycom15g02610
rosa_chinensis RchiOBHm_Chr6g0300721
rosa_laevigata RLG00000011308
rosa_multiflora Rmu_co8477681.1_g000001
rosa_roxburghii Rroxscaffold_7G00167480
rosa_rugosa Rorug06G0298700
rosa_samantha Rh6AG411300 Rh6BG418600 Rh6CG426000 Rh6DG411500
rosa_wichuraiana Rw6G036000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 258, 285
AccB1I GGYRCC 3 cut(s) 503, 787, 1496
AccB7I CCANNNNNTGG 1 cut(s) 1277
AccBSI CCGCTC 3 cut(s) 83, 445, 1535
AccI GTMKAC 1 cut(s) 327
AccII CGCG 4 cut(s) 87, 170, 602, 1229
AclWI GGATC 1 cut(s) 143
AcsI RAATTY 1 cut(s) 1474
AcuI CTGAAG 2 cut(s) 311, 894
AcvI CACGTG 1 cut(s) 1294
AcyI GRCGYC 2 cut(s) 680, 788
AfaI GTAC 4 cut(s) 315, 515, 640, 1520
AfiI CCNNNNNNNGG 4 cut(s) 265, 370, 1277, 1308
AgsI TTSAA 5 cut(s) 45, 654, 1316, 1348, 1504
AjiI CACGTC 1 cut(s) 498
AjnI CCWGG 1 cut(s) 984
AjuI GAANNNNNNNTTGG 2 cut(s) 753, 785
AleI CACNNNNGTG 1 cut(s) 719
AluBI AGCT 8 cut(s) 10, 50, 256, 289, 555, 747, 1514, 1548
AluI AGCT 8 cut(s) 10, 50, 256, 289, 555, 747, 1514, 1548
Alw21I GWGCWC 5 cut(s) 357, 452, 749, 1291, 1576
Alw26I GTCTC 3 cut(s) 335, 729, 1236
Alw44I GTGCAC 2 cut(s) 353, 1572
AlwI GGATC 1 cut(s) 143
AlwNI CAGNNNCTG 1 cut(s) 250
Ama87I CYCGRG 4 cut(s) 338, 369, 507, 646
AoxI GGCC 5 cut(s) 268, 729, 772, 979, 1384
ApaLI GTGCAC 2 cut(s) 353, 1572
ApoI RAATTY 1 cut(s) 1474
AseI ATTAAT 1 cut(s) 1014
Asp700I GAANNNNTTC 1 cut(s) 203
AspLEI GCGC 6 cut(s) 172, 376, 487, 602, 790, 1445
AspS9I GGNCC 6 cut(s) 241, 268, 627, 979, 1364, 1384
AsuC2I CCSGG 3 cut(s) 138, 370, 371
AsuHPI GGTGA 3 cut(s) 936, 949, 1442
AvaI CYCGRG 4 cut(s) 338, 369, 507, 646
AvaII GGWCC 3 cut(s) 241, 627, 1364
BaeGI GKGCMC 2 cut(s) 357, 1576
BanI GGYRCC 3 cut(s) 503, 787, 1496
BanII GRGCYC 1 cut(s) 749
BarI GAAGNNNNNNTAC 2 cut(s) 311, 343
BauI CACGAG 1 cut(s) 1398
BbrPI CACGTG 1 cut(s) 1294
BbsI GAAGAC 1 cut(s) 500
Bbv12I GWGCWC 5 cut(s) 357, 452, 749, 1291, 1576
BccI CCATC 3 cut(s) 983, 1354, 1427
BceAI ACGGC 5 cut(s) 13, 265, 436, 831, 1155
BcgI CGANNNNNNTGC 4 cut(s) 169, 203, 392, 426
BciT130I CCWGG 1 cut(s) 986
BciVI GTATCC 1 cut(s) 979
BcnI CCSGG 3 cut(s) 138, 370, 371
BcoDI GTCTC 3 cut(s) 335, 729, 1236
BfaI CTAG 2 cut(s) 377, 543
BfmI CTRYAG 3 cut(s) 220, 251, 1173
BfoI RGCGCY 3 cut(s) 377, 791, 1446
BfuAI ACCTGC 2 cut(s) 258, 285
BfuI GTATCC 1 cut(s) 979
BglI GCCNNNNNGGC 1 cut(s) 990
BglII AGATCT 1 cut(s) 216
BlpI GCTNAGC 2 cut(s) 1116, 1415
Bme1390I CCNGG 4 cut(s) 138, 370, 371, 986
Bme18I GGWCC 3 cut(s) 241, 627, 1364
BmeT110I CYCGRG 4 cut(s) 338, 369, 507, 646
BmgBI CACGTC 1 cut(s) 498
BmgT120I GGNCC 6 cut(s) 241, 268, 627, 979, 1364, 1384
BmrFI CCNGG 4 cut(s) 138, 370, 371, 986
BmsI GCATC 3 cut(s) 947, 1187, 1428
BpiI GAAGAC 1 cut(s) 500
BplI GAGNNNNNCTC 2 cut(s) 434, 466
BpmI CTGGAG 1 cut(s) 1042
Bpu1102I GCTNAGC 2 cut(s) 1116, 1415
BpuEI CTTGAG 1 cut(s) 1218
BpuMI CCSGG 3 cut(s) 138, 370, 371
BsaAI YACGTR 1 cut(s) 1294
BsaHI GRCGYC 2 cut(s) 680, 788
BsaI GGTCTC 1 cut(s) 335
BsaJI CCNNGG 4 cut(s) 281, 369, 813, 1137
Bsc4I CCNNNNNNNGG 4 cut(s) 265, 370, 1277, 1308
Bse118I RCCGGY 1 cut(s) 261
Bse1I ACTGG 3 cut(s) 66, 856, 885
Bse3DI GCAATG 3 cut(s) 834, 1142, 1250
BseBI CCWGG 1 cut(s) 986
BseDI CCNNGG 4 cut(s) 281, 369, 813, 1137
BseGI GGATG 3 cut(s) 166, 994, 1223
BseLI CCNNNNNNNGG 4 cut(s) 265, 370, 1277, 1308
BseMI GCAATG 3 cut(s) 834, 1142, 1250
BseMII CTCAG 3 cut(s) 762, 1130, 1406
BseNI ACTGG 3 cut(s) 66, 856, 885
BseRI GAGGAG 2 cut(s) 608, 1545
BseSI GKGCMC 2 cut(s) 357, 1576
BsgI GTGCAG 1 cut(s) 488
Bsh1236I CGCG 4 cut(s) 87, 170, 602, 1229
BshFI GGCC 5 cut(s) 270, 731, 774, 981, 1386
BshNI GGYRCC 3 cut(s) 503, 787, 1496
BsiHKAI GWGCWC 5 cut(s) 357, 452, 749, 1291, 1576
BsiHKCI CYCGRG 4 cut(s) 338, 369, 507, 646
BsiSI CCGG 6 cut(s) 54, 138, 262, 370, 728, 785
BsiWI CGTACG 1 cut(s) 1518
BslFI GGGAC 3 cut(s) 254, 544, 763
BslI CCNNNNNNNGG 4 cut(s) 265, 370, 1277, 1308
BsmAI GTCTC 3 cut(s) 335, 729, 1236
BsmBI CGTCTC 1 cut(s) 1236
BsmFI GGGAC 3 cut(s) 254, 544, 763
BsmI GAATGC 1 cut(s) 147
BsnI GGCC 5 cut(s) 270, 731, 774, 981, 1386
Bso31I GGTCTC 1 cut(s) 335
BsoBI CYCGRG 4 cut(s) 338, 369, 507, 646
Bsp1286I GDGCHC 5 cut(s) 357, 452, 749, 1291, 1576
Bsp143I GATC 5 cut(s) 148, 165, 216, 1090, 1351
Bsp1720I GCTNAGC 2 cut(s) 1116, 1415
Bsp68I TCGCGA 1 cut(s) 87
BspANI GGCC 5 cut(s) 270, 731, 774, 981, 1386
BspCNI CTCAG 3 cut(s) 761, 1129, 1407
BspFNI CGCG 4 cut(s) 87, 170, 602, 1229
BspMAI CTGCAG 3 cut(s) 224, 255, 1177
BspMI ACCTGC 2 cut(s) 258, 285
BspPI GGATC 1 cut(s) 143
BspT107I GGYRCC 3 cut(s) 503, 787, 1496
BspTNI GGTCTC 1 cut(s) 335
BsrBI CCGCTC 3 cut(s) 83, 445, 1535
BsrDI GCAATG 3 cut(s) 834, 1142, 1250
BsrFI RCCGGY 1 cut(s) 261
BsrI ACTGG 3 cut(s) 66, 856, 885
BssAI RCCGGY 1 cut(s) 261
BssECI CCNNGG 4 cut(s) 281, 369, 813, 1137
BssMI GATC 5 cut(s) 148, 165, 216, 1090, 1351
BssNI GRCGYC 2 cut(s) 680, 788
BssSI CACGAG 1 cut(s) 1398
Bst2BI CACGAG 1 cut(s) 1398
Bst2UI CCWGG 1 cut(s) 986
Bst4CI ACNGT 5 cut(s) 203, 708, 718, 948, 1106
BstACI GRCGYC 2 cut(s) 680, 788
BstBAI YACGTR 1 cut(s) 1294
BstC8I GCNNGC 9 cut(s) 85, 192, 353, 443, 792, 1122, 1388, 1537, 1550
BstDEI CTNAG 3 cut(s) 748, 1116, 1415
BstDSI CCRYGG 3 cut(s) 281, 813, 1137
BstF5I GGATG 3 cut(s) 166, 994, 1223
BstFNI CGCG 4 cut(s) 87, 170, 602, 1229
BstH2I RGCGCY 3 cut(s) 377, 791, 1446
BstHHI GCGC 6 cut(s) 172, 376, 487, 602, 790, 1445
BstKTI GATC 5 cut(s) 151, 168, 219, 1093, 1354
BstMAI GTCTC 3 cut(s) 335, 729, 1236
BstMBI GATC 5 cut(s) 148, 165, 216, 1090, 1351
BstNI CCWGG 1 cut(s) 986
BstNSI RCATGY 1 cut(s) 804
BstSCI CCNGG 4 cut(s) 136, 368, 369, 984
BstSFI CTRYAG 3 cut(s) 220, 251, 1173
BstSLI GKGCMC 2 cut(s) 357, 1576
BstUI CGCG 4 cut(s) 87, 170, 602, 1229
BstV2I GAAGAC 1 cut(s) 500
BstX2I RGATCY 2 cut(s) 148, 216
BstYI RGATCY 2 cut(s) 148, 216
BsuI GTATCC 1 cut(s) 979
BsuRI GGCC 5 cut(s) 270, 731, 774, 981, 1386
BtgI CCRYGG 3 cut(s) 281, 813, 1137
BtgZI GCGATG 1 cut(s) 9
BtrI CACGTC 1 cut(s) 498
BtsCI GGATG 3 cut(s) 166, 994, 1223
BtsI GCAGTG 5 cut(s) 443, 471, 1069, 1190, 1262
BtsIMutI CAGTG 6 cut(s) 443, 471, 892, 1069, 1190, 1262
BtuMI TCGCGA 1 cut(s) 87
BveI ACCTGC 2 cut(s) 258, 285
Cac8I GCNNGC 9 cut(s) 85, 192, 353, 443, 792, 1122, 1388, 1537, 1550
CaiI CAGNNNCTG 1 cut(s) 250
CfoI GCGC 6 cut(s) 172, 376, 487, 602, 790, 1445
Cfr10I RCCGGY 1 cut(s) 261
Cfr13I GGNCC 6 cut(s) 241, 268, 627, 979, 1364, 1384
Cfr9I CCCGGG 1 cut(s) 369
CseI GACGC 3 cut(s) 590, 669, 1218
Csp6I GTAC 4 cut(s) 314, 514, 639, 1519
CspCI CAANNNNNGTGG 4 cut(s) 699, 734, 817, 852
CviAII CATG 5 cut(s) 94, 490, 801, 1129, 1393
CviQI GTAC 4 cut(s) 314, 514, 639, 1519
DdeI CTNAG 3 cut(s) 748, 1116, 1415
DinI GGCGCC 1 cut(s) 789
DpnI GATC 5 cut(s) 150, 167, 218, 1092, 1353
DpnII GATC 5 cut(s) 148, 165, 216, 1090, 1351
EciI GGCGGA 4 cut(s) 605, 997, 1123, 1470
Ecl136II GAGCTC 1 cut(s) 747
Eco24I GRGCYC 1 cut(s) 749
Eco31I GGTCTC 1 cut(s) 335
Eco47I GGWCC 3 cut(s) 241, 627, 1364
Eco53kI GAGCTC 1 cut(s) 747
Eco57I CTGAAG 2 cut(s) 311, 894
Eco72I CACGTG 1 cut(s) 1294
Eco88I CYCGRG 4 cut(s) 338, 369, 507, 646
EcoICRI GAGCTC 1 cut(s) 747
EcoRI GAATTC 1 cut(s) 1474
EcoRII CCWGG 1 cut(s) 984
EcoT38I GRGCYC 1 cut(s) 749
EgeI GGCGCC 1 cut(s) 789
EheI GGCGCC 1 cut(s) 789
Esp3I CGTCTC 1 cut(s) 1236
FaeI CATG 5 cut(s) 97, 493, 804, 1132, 1396
FaiI YATR 6 cut(s) 95, 491, 560, 802, 1130, 1394
FalI AAGNNNNNCTT 2 cut(s) 389, 421
FaqI GGGAC 3 cut(s) 254, 544, 763
FatI CATG 5 cut(s) 93, 489, 800, 1128, 1392
FauI CCCGC 6 cut(s) 231, 258, 315, 521, 1129, 1528
FblI GTMKAC 1 cut(s) 327
FokI GGATG 3 cut(s) 173, 1001, 1210
FriOI GRGCYC 1 cut(s) 749
FspBI CTAG 2 cut(s) 377, 543
GlaI GCGC 6 cut(s) 171, 375, 486, 601, 789, 1444
GsuI CTGGAG 1 cut(s) 1042
HaeII RGCGCY 3 cut(s) 377, 791, 1446
HaeIII GGCC 5 cut(s) 270, 731, 774, 981, 1386
HapII CCGG 6 cut(s) 54, 138, 262, 370, 728, 785
HgaI GACGC 3 cut(s) 590, 669, 1218
HhaI GCGC 6 cut(s) 172, 376, 487, 602, 790, 1445
Hin1I GRCGYC 2 cut(s) 680, 788
Hin1II CATG 5 cut(s) 97, 493, 804, 1132, 1396
Hin6I GCGC 6 cut(s) 170, 374, 485, 600, 788, 1443
HinP1I GCGC 6 cut(s) 170, 374, 485, 600, 788, 1443
HinfI GANTC 5 cut(s) 97, 184, 661, 1396, 1559
HpaII CCGG 6 cut(s) 54, 138, 262, 370, 728, 785
HphI GGTGA 3 cut(s) 936, 949, 1442
Hpy166II GTNNAC 5 cut(s) 328, 355, 1215, 1367, 1574
Hpy188I TCNGA 7 cut(s) 106, 475, 631, 660, 666, 744, 751
Hpy188III TCNNGA 5 cut(s) 86, 152, 1235, 1400, 1471
Hpy8I GTNNAC 5 cut(s) 328, 355, 1215, 1367, 1574
Hpy99I CGWCG 5 cut(s) 184, 584, 635, 685, 1378
HpyAV CCTTC 9 cut(s) 31, 143, 475, 598, 909, 1380, 1415, 1510, 1562
HpyCH4III ACNGT 5 cut(s) 203, 708, 718, 948, 1106
HpyCH4IV ACGT 3 cut(s) 330, 497, 1293
HpyF3I CTNAG 3 cut(s) 748, 1116, 1415
HpySE526I ACGT 3 cut(s) 330, 497, 1293
Hsp92I GRCGYC 2 cut(s) 680, 788
Hsp92II CATG 5 cut(s) 97, 493, 804, 1132, 1396
HspAI GCGC 6 cut(s) 170, 374, 485, 600, 788, 1443
KasI GGCGCC 1 cut(s) 787
Kzo9I GATC 5 cut(s) 148, 165, 216, 1090, 1351
LmnI GCTCC 9 cut(s) 7, 106, 261, 455, 998, 1152, 1298, 1519, 1532
LweI GCATC 3 cut(s) 947, 1187, 1428
MaeI CTAG 2 cut(s) 377, 543
MaeII ACGT 3 cut(s) 330, 497, 1293
MaeIII GTNAC 4 cut(s) 30, 942, 1106, 1400
MalI GATC 5 cut(s) 150, 167, 218, 1092, 1353
MbiI CCGCTC 3 cut(s) 83, 445, 1535
MboI GATC 5 cut(s) 148, 165, 216, 1090, 1351
MboII GAAGA 2 cut(s) 439, 505
MfeI CAATTG 2 cut(s) 768, 1343
MflI RGATCY 2 cut(s) 148, 216
MhlI GDGCHC 5 cut(s) 357, 452, 749, 1291, 1576
MluCI AATT 6 cut(s) 16, 752, 768, 856, 1343, 1474
Mly113I GGCGCC 1 cut(s) 788
MlyI GAGTC 4 cut(s) 91, 178, 655, 1390
MmeI TCCRAC 3 cut(s) 654, 683, 1106
MroXI GAANNNNTTC 1 cut(s) 203
MseI TTAA 4 cut(s) 71, 396, 806, 1014
MslI CAYNNNNRTG 2 cut(s) 719, 1255
MspA1I CMGCKG 3 cut(s) 238, 298, 1494
MspI CCGG 6 cut(s) 54, 138, 262, 370, 728, 785
MspR9I CCNGG 4 cut(s) 138, 370, 371, 986
MunI CAATTG 2 cut(s) 768, 1343
Mva1269I GAATGC 1 cut(s) 147
MvaI CCWGG 1 cut(s) 986
MvnI CGCG 4 cut(s) 87, 170, 602, 1229
NarI GGCGCC 1 cut(s) 788
NciI CCSGG 3 cut(s) 138, 370, 371
NdeII GATC 5 cut(s) 148, 165, 216, 1090, 1351
NlaIII CATG 5 cut(s) 97, 493, 804, 1132, 1396
NmeAIII GCCGAG 1 cut(s) 1327
NmuCI GTSAC 3 cut(s) 942, 1106, 1400
NruI TCGCGA 1 cut(s) 87
NspI RCATGY 1 cut(s) 804
OliI CACNNNNGTG 1 cut(s) 719
PcsI WCGNNNNNNNCGW 4 cut(s) 32, 336, 569, 1299
PctI GAATGC 1 cut(s) 147
PdmI GAANNNNTTC 1 cut(s) 203
PfeI GAWTC 1 cut(s) 1559
Pfl23II CGTACG 1 cut(s) 1518
PflMI CCANNNNNTGG 1 cut(s) 1277
PfoI TCCNGGA 1 cut(s) 136
PleI GAGTC 4 cut(s) 91, 178, 655, 1390
PluTI GGCGCC 1 cut(s) 791
PmaCI CACGTG 1 cut(s) 1294
PmlI CACGTG 1 cut(s) 1294
PpsI GAGTC 4 cut(s) 91, 178, 655, 1390
Ppu21I YACGTR 1 cut(s) 1294
PshBI ATTAAT 1 cut(s) 1014
Psp124BI GAGCTC 1 cut(s) 749
Psp6I CCWGG 1 cut(s) 984
PspCI CACGTG 1 cut(s) 1294
PspGI CCWGG 1 cut(s) 984
PspLI CGTACG 1 cut(s) 1518
PspPI GGNCC 6 cut(s) 241, 268, 627, 979, 1364, 1384
PstI CTGCAG 3 cut(s) 224, 255, 1177
PstNI CAGNNNCTG 1 cut(s) 250
PsuI RGATCY 2 cut(s) 148, 216
RruI TCGCGA 1 cut(s) 87
RsaI GTAC 4 cut(s) 315, 515, 640, 1520
RsaNI GTAC 4 cut(s) 314, 514, 639, 1519
RseI CAYNNNNRTG 2 cut(s) 719, 1255
SacI GAGCTC 1 cut(s) 749
SaqAI TTAA 4 cut(s) 71, 396, 806, 1014
Sau3AI GATC 5 cut(s) 148, 165, 216, 1090, 1351
Sau96I GGNCC 6 cut(s) 241, 268, 627, 979, 1364, 1384
SchI GAGTC 4 cut(s) 91, 178, 655, 1390
ScrFI CCNGG 4 cut(s) 138, 370, 371, 986
SduI GDGCHC 5 cut(s) 357, 452, 749, 1291, 1576
SfaNI GCATC 3 cut(s) 947, 1187, 1428
SfcI CTRYAG 3 cut(s) 220, 251, 1173
SfoI GGCGCC 1 cut(s) 789
SgrAI CRCCGGYG 1 cut(s) 261
SinI GGWCC 3 cut(s) 241, 627, 1364
SmaI CCCGGG 1 cut(s) 371
SmiMI CAYNNNNRTG 2 cut(s) 719, 1255
SmlI CTYRAG 1 cut(s) 1233
SmoI CTYRAG 1 cut(s) 1233
Sse9I AATT 6 cut(s) 16, 752, 768, 856, 1343, 1474
SspDI GGCGCC 1 cut(s) 787
SspMI CTAG 2 cut(s) 377, 543
SstI GAGCTC 1 cut(s) 749
StyD4I CCNGG 4 cut(s) 136, 368, 369, 984
TaaI ACNGT 5 cut(s) 203, 708, 718, 948, 1106
TaiI ACGT 3 cut(s) 333, 500, 1296
TaqI TCGA 2 cut(s) 412, 848
TasI AATT 6 cut(s) 16, 752, 768, 856, 1343, 1474
TatI WGTACW 1 cut(s) 513
TauI GCSGC 6 cut(s) 60, 112, 115, 504, 688, 984
TfiI GAWTC 1 cut(s) 1559
Tru1I TTAA 4 cut(s) 71, 396, 806, 1014
Tru9I TTAA 4 cut(s) 71, 396, 806, 1014
TscAI CASTG 6 cut(s) 443, 471, 892, 1069, 1197, 1262
TseFI GTSAC 3 cut(s) 942, 1106, 1400
Tsp45I GTSAC 3 cut(s) 942, 1106, 1400
TspDTI ATGAA 3 cut(s) 506, 547, 1032
TspGWI ACGGA 4 cut(s) 331, 648, 1506, 1536
TspMI CCCGGG 1 cut(s) 369
TspRI CASTG 6 cut(s) 443, 471, 892, 1069, 1197, 1262
Van91I CCANNNNNTGG 1 cut(s) 1277
VneI GTGCAC 2 cut(s) 353, 1572
VpaK11BI GGWCC 3 cut(s) 241, 627, 1364
VspI ATTAAT 1 cut(s) 1014
XapI RAATTY 1 cut(s) 1474
XceI RCATGY 1 cut(s) 804
XmaI CCCGGG 1 cut(s) 369
XmiI GTMKAC 1 cut(s) 327
XmnI GAANNNNTTC 1 cut(s) 203
XspI CTAG 2 cut(s) 377, 543
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.