Rw6G036000

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0013791
Physical Location & Seq
Reverse (-)
60573009 .. 60575634
2626 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G036000.1

Sequence Viewer

Length: 1566 bp
ATGGGCGACCTTGACAATTCTTCCTCACTAGTTGGTTCTACCGCTTCAGGAGAAGCTACTTTTTCGGAGCCTCCTGCCAAGAAGAAGCGAAATCTTCCAGGAATGCCAGATCCTGAAGCGGAGGTGATCGCACTGTCGCCGAAAACTCTGATGGCGACGAACCGTTTCGTGTGCGAGATCTGCAACAAAGGGTTCCAGCGCGACCAAAACCTCCAGCTCCACCGCAGAGGCCACAACCTGCCGTGGAAGCTGAGGCAGCGAACCACGACGGAGGTTCGGAAGCGGGTTTACGTCTGCCCCGAGACGTCGTGCGTGCACCACAACCCGACCCGAGCGCTGGGCGATCTCACCGGGATTAAGAAGCACTTTTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAGCGGTGCTCGAAGAAGTACGCGGTGCAATCTGATTGGAAGGCGCACATGAAGACCTGCGGCACTAGAGAGTACAAATGTGATTGTGGAACTTTGTTCTCTAGGAGGGATAGCTTCATAACGCATAGGGCTTTCTGTGATGCCTTGGCCGAGGAGAGTGCTAAAGCTCAAACCCTAGGAAGCTCGCAGCTTGCAAATCCGACCCCGAGCCCGAATGGTGGAAAGGCGGTTGTGGTGGCATCGCCGCCTCCACCGCCTCTCACACCTTCCAATAATGTGGTATCTCCAGCTCTATCCATTCAAAGCTCAGAATTCCCAGAAAACCCAGTAGGACTGTCGCCACCACCTCCAGCAACCACGTGCTTAACGAGTACCACGACGGCGATTAGCACCACGGCCACCACCACCACCACCTCAACTGGAAATTGCAGCAACACTAGTACTAGTGTATTTGCTAGCATATTTGCTCCTTCTAGTACTGCCTCACAAACATCAGCAGCCGCTAATTCCTCATACTCCAATATAGTCTCCAGTTCTGCAATCCCATCAGCCTCCGCTATGGAACCAACGTCTCTCTCACTCTCCACCTCTCTATACCTATCCAACAATGGCTCCACCCTCTTCCCAACTGCTGATCAGCAAGACCATCGCCAGTATGTAGCTTCTCCTCAGGCTCCAGCCATGTCCGCCACGGCATTGCTCCAAAAAGCAGCCCAAATGGGTGCAGCTGCGACTAGTGGGTCTTTTCTTCGTGGCTTTGGCTTGGCCACGTCCTCATCGCCGCCCCAGGCGCAAGATAGCACCACCTCTTTGCAGTGGAACAACAACAGCCACAGCCATCAGCACAAGAGAGATGGTAGCGGCGGTGCTGCTGCCACAGTAGCAGCTGGGCTTGGAGCAAGTTCTGCCCTATTGACTGATCTCATGATGGGCCCACCTGTGCCGTTTGGGGGTCATCATCAGCCCATGACCCGCGACCTTCTTGGGCTGGGCATAGGTGCTAATGGCGGGGGTGGCAGTGCTTCATCCGCCGGACTATCTGCTTTGCTCAATTCGTTCGGCGGTGGTGGAGGTTATACTACATATGCAAGGGGAGAAGAGTCGGCATGGGAAGGTGCACAGGAGAGGAAACCTAATACTGCTACTGGCCCAGCCTTGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz zf-met

Protein Analysis

521

Amino Acids

54.31

Weight (kDa)

9.05

Isoelectric Point (pI)

52.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 93 - 127 1.5e-21 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 131 - 155 3.1e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 158 - 195 1.7e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013791)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g40030
malus_domestica MD08G1033100.v1.1 MD15G1029700.v1.1
prunus_persica Prupe.1G381800_v2.0.a1
pyrus_communis pycom08g02620 pycom12g10450 pycom15g02610
rosa_chinensis RchiOBHm_Chr6g0300721
rosa_laevigata RLG00000011308
rosa_multiflora Rmu_co8477681.1_g000001
rosa_roxburghii Rroxscaffold_7G00167480
rosa_rugosa Rorug06G0298700
rosa_samantha Rh6AG411300 Rh6BG418600 Rh6CG426000 Rh6DG411500
rosa_wichuraiana Rw6G036000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1141
AatII GACGTC 1 cut(s) 308
Acc36I ACCTGC 2 cut(s) 246, 467
AccBSI CCGCTC 1 cut(s) 406
AccII CGCG 3 cut(s) 201, 425, 1377
AclWI GGATC 1 cut(s) 104
AcoI YGGCCR 3 cut(s) 549, 798, 1167
AcsI RAATTY 1 cut(s) 713
AcuI CTGAAG 2 cut(s) 30, 135
AcvI CACGTG 1 cut(s) 762
AcyI GRCGYC 1 cut(s) 305
AfaI GTAC 5 cut(s) 422, 476, 775, 844, 880
AfeI AGCGCT 1 cut(s) 336
AfiI CCNNNNNNNGG 3 cut(s) 337, 620, 1352
AgsI TTSAA 1 cut(s) 704
AhlI ACTAGT 4 cut(s) 28, 839, 845, 1136
AjiI CACGTC 1 cut(s) 1173
AjnI CCWGG 2 cut(s) 97, 1188
Alw21I GWGCWC 3 cut(s) 318, 413, 1522
Alw26I GTCTC 3 cut(s) 296, 934, 978
Alw44I GTGCAC 2 cut(s) 314, 1518
AlwI GGATC 1 cut(s) 104
AlwNI CAGNNNCTG 1 cut(s) 113
Ama87I CYCGRG 3 cut(s) 299, 330, 607
Aor51HI AGCGCT 1 cut(s) 336
AoxI GGCC 6 cut(s) 229, 549, 798, 1167, 1333, 1549
ApaI GGGCCC 1 cut(s) 1337
ApaLI GTGCAC 2 cut(s) 314, 1518
ApoI RAATTY 1 cut(s) 713
Asp700I GAANNNNTTC 1 cut(s) 164
AspA2I CCTAGG 1 cut(s) 577
AspLEI GCGC 4 cut(s) 201, 337, 448, 1195
AspS9I GGNCC 3 cut(s) 1333, 1334, 1550
AsuC2I CCSGG 1 cut(s) 352
AsuHPI GGTGA 2 cut(s) 136, 340
AsuNHI GCTAGC 1 cut(s) 857
AvaI CYCGRG 3 cut(s) 299, 330, 607
AvrII CCTAGG 1 cut(s) 577
AxyI CCTNAGG 1 cut(s) 1071
BaeGI GKGCMC 3 cut(s) 318, 1337, 1522
BalI TGGCCA 1 cut(s) 1169
BanII GRGCYC 2 cut(s) 614, 1337
BarI GAAGNNNNNNTAC 2 cut(s) 272, 304
BbrPI CACGTG 1 cut(s) 762
BbsI GAAGAC 1 cut(s) 461
Bbv12I GWGCWC 3 cut(s) 318, 413, 1522
BbvCI CCTCAGC 1 cut(s) 251
BccI CCATC 6 cut(s) 145, 955, 1056, 1248, 1250, 1324
BceAI ACGGC 6 cut(s) 226, 397, 798, 813, 1110, 1330
BcgI CGANNNNNNTGC 4 cut(s) 542, 576, 1031, 1065
BciT130I CCWGG 2 cut(s) 99, 1190
BclI TGATCA 1 cut(s) 1036
BcnI CCSGG 1 cut(s) 352
BcoDI GTCTC 3 cut(s) 296, 934, 978
BcuI ACTAGT 4 cut(s) 28, 839, 845, 1136
BfaI CTAG 9 cut(s) 29, 468, 504, 578, 840, 846, 858, 876, 1137
BfoI RGCGCY 1 cut(s) 338
BfuAI ACCTGC 2 cut(s) 246, 467
BglII AGATCT 1 cut(s) 177
BlnI CCTAGG 1 cut(s) 577
BmcAI AGTACT 2 cut(s) 844, 880
Bme1390I CCNGG 3 cut(s) 99, 352, 1190
BmeT110I CYCGRG 3 cut(s) 299, 330, 607
BmgBI CACGTC 1 cut(s) 1173
BmgT120I GGNCC 3 cut(s) 1333, 1334, 1550
BmiI GGNNCC 6 cut(s) 69, 194, 966, 1015, 1077, 1335
BmrFI CCNGG 3 cut(s) 99, 352, 1190
BmrI ACTGGG 1 cut(s) 722
BmsI GCATC 2 cut(s) 532, 650
BmtI GCTAGC 1 cut(s) 861
BmuI ACTGGG 1 cut(s) 722
BpiI GAAGAC 1 cut(s) 461
BplI GAGNNNNNCTC 2 cut(s) 395, 427
BpmI CTGGAG 5 cut(s) 197, 672, 735, 916, 1062
Bpu10I CCTNAGC 1 cut(s) 251
BpuMI CCSGG 1 cut(s) 352
BsaAI YACGTR 1 cut(s) 762
BsaHI GRCGYC 1 cut(s) 305
BsaJI CCNNGG 7 cut(s) 242, 546, 552, 577, 795, 1092, 1188
BsaXI ACNNNNNCTCC 2 cut(s) 998, 1028
Bsc4I CCNNNNNNNGG 3 cut(s) 337, 620, 1352
Bse1I ACTGG 5 cut(s) 728, 826, 933, 1054, 1552
Bse21I CCTNAGG 1 cut(s) 1071
Bse3DI GCAATG 1 cut(s) 1097
BseBI CCWGG 2 cut(s) 99, 1190
BseDI CCNNGG 7 cut(s) 242, 546, 552, 577, 795, 1092, 1188
BseGI GGATG 1 cut(s) 1427
BseLI CCNNNNNNNGG 3 cut(s) 337, 620, 1352
BseMI GCAATG 1 cut(s) 1097
BseMII CTCAG 3 cut(s) 242, 723, 1085
BseNI ACTGG 5 cut(s) 728, 826, 933, 1054, 1552
BseRI GAGGAG 2 cut(s) 569, 1059
BseSI GKGCMC 3 cut(s) 318, 1337, 1522
BseYI CCCAGC 4 cut(s) 337, 1289, 1390, 1552
BsgI GTGCAG 1 cut(s) 1146
Bsh1236I CGCG 3 cut(s) 201, 425, 1377
BshFI GGCC 6 cut(s) 231, 551, 800, 1169, 1335, 1551
BsiHKAI GWGCWC 3 cut(s) 318, 413, 1522
BsiHKCI CYCGRG 3 cut(s) 299, 330, 607
BsiSI CCGG 2 cut(s) 351, 1434
BslI CCNNNNNNNGG 3 cut(s) 337, 620, 1352
BsmAI GTCTC 3 cut(s) 296, 934, 978
BsmBI CGTCTC 2 cut(s) 296, 978
BsmI GAATGC 1 cut(s) 108
BsnI GGCC 6 cut(s) 231, 551, 800, 1169, 1335, 1551
BsoBI CYCGRG 3 cut(s) 299, 330, 607
Bsp120I GGGCCC 1 cut(s) 1333
Bsp1286I GDGCHC 5 cut(s) 318, 413, 614, 1337, 1522
Bsp143I GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
BspANI GGCC 6 cut(s) 231, 551, 800, 1169, 1335, 1551
BspCNI CTCAG 3 cut(s) 243, 722, 1084
BspFNI CGCG 3 cut(s) 201, 425, 1377
BspHI TCATGA 1 cut(s) 1326
BspLI GGNNCC 6 cut(s) 69, 194, 966, 1015, 1077, 1335
BspMI ACCTGC 2 cut(s) 246, 467
BspOI GCTAGC 1 cut(s) 861
BspPI GGATC 1 cut(s) 104
BsrBI CCGCTC 1 cut(s) 406
BsrDI GCAATG 1 cut(s) 1097
BsrI ACTGG 5 cut(s) 728, 826, 933, 1054, 1552
BssECI CCNNGG 7 cut(s) 242, 546, 552, 577, 795, 1092, 1188
BssMI GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
BssNI GRCGYC 1 cut(s) 305
BssT1I CCWWGG 2 cut(s) 546, 577
Bst2UI CCWGG 2 cut(s) 99, 1190
Bst4CI ACNGT 4 cut(s) 135, 164, 738, 1282
Bst6I CTCTTC 2 cut(s) 1028, 1494
BstACI GRCGYC 1 cut(s) 305
BstAPI GCANNNNNTGC 1 cut(s) 1307
BstBAI YACGTR 1 cut(s) 762
BstC8I GCNNGC 5 cut(s) 314, 404, 587, 594, 859
BstDEI CTNAG 3 cut(s) 251, 709, 1071
BstDSI CCRYGG 3 cut(s) 242, 795, 1092
BstF5I GGATG 1 cut(s) 1427
BstFNI CGCG 3 cut(s) 201, 425, 1377
BstH2I RGCGCY 1 cut(s) 338
BstHHI GCGC 4 cut(s) 201, 337, 448, 1195
BstKTI GATC 6 cut(s) 112, 129, 180, 346, 1039, 1324
BstMAI GTCTC 3 cut(s) 296, 934, 978
BstMBI GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
BstNI CCWGG 2 cut(s) 99, 1190
BstSCI CCNGG 3 cut(s) 97, 350, 1188
BstSLI GKGCMC 3 cut(s) 318, 1337, 1522
BstUI CGCG 3 cut(s) 201, 425, 1377
BstV2I GAAGAC 1 cut(s) 461
BstX2I RGATCY 2 cut(s) 109, 177
BstXI CCANNNNNNTGG 1 cut(s) 679
BstYI RGATCY 2 cut(s) 109, 177
Bsu36I CCTNAGG 1 cut(s) 1071
BsuRI GGCC 6 cut(s) 231, 551, 800, 1169, 1335, 1551
BtgI CCRYGG 3 cut(s) 242, 795, 1092
BtgZI GCGATG 3 cut(s) 627, 1034, 1164
BtrI CACGTC 1 cut(s) 1173
BtsCI GGATG 1 cut(s) 1427
BtsI GCAGTG 2 cut(s) 1223, 1426
BtsIMutI CAGTG 3 cut(s) 131, 1223, 1426
BveI ACCTGC 2 cut(s) 246, 467
Cac8I GCNNGC 5 cut(s) 314, 404, 587, 594, 859
CaiI CAGNNNCTG 1 cut(s) 113
CciI TCATGA 1 cut(s) 1326
CfoI GCGC 4 cut(s) 201, 337, 448, 1195
Cfr13I GGNCC 3 cut(s) 1333, 1334, 1550
Csp6I GTAC 5 cut(s) 421, 475, 774, 843, 879
CviAII CATG 5 cut(s) 451, 1084, 1327, 1369, 1509
CviQI GTAC 5 cut(s) 421, 475, 774, 843, 879
DdeI CTNAG 3 cut(s) 251, 709, 1071
DpnI GATC 6 cut(s) 111, 128, 179, 345, 1038, 1323
DpnII GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
DrdI GACNNNNNNGTC 1 cut(s) 1141
DseDI GACNNNNNNGTC 1 cut(s) 1141
EaeI YGGCCR 3 cut(s) 549, 798, 1167
Eam1104I CTCTTC 2 cut(s) 1028, 1494
EarI CTCTTC 2 cut(s) 1028, 1494
EciI GGCGGA 2 cut(s) 1078, 1420
Eco130I CCWWGG 2 cut(s) 546, 577
Eco24I GRGCYC 2 cut(s) 614, 1337
Eco47III AGCGCT 1 cut(s) 336
Eco57I CTGAAG 2 cut(s) 30, 135
Eco72I CACGTG 1 cut(s) 762
Eco81I CCTNAGG 1 cut(s) 1071
Eco88I CYCGRG 3 cut(s) 299, 330, 607
EcoRI GAATTC 1 cut(s) 713
EcoRII CCWGG 2 cut(s) 97, 1188
EcoT14I CCWWGG 2 cut(s) 546, 577
EcoT38I GRGCYC 2 cut(s) 614, 1337
ErhI CCWWGG 2 cut(s) 546, 577
Esp3I CGTCTC 2 cut(s) 296, 978
FaeI CATG 5 cut(s) 454, 1087, 1330, 1372, 1512
FalI AAGNNNNNCTT 2 cut(s) 350, 382
FatI CATG 5 cut(s) 450, 1083, 1326, 1368, 1508
FauI CCCGC 3 cut(s) 276, 1382, 1403
FauNDI CATATG 1 cut(s) 1486
FbaI TGATCA 1 cut(s) 1036
FokI GGATG 1 cut(s) 1414
FriOI GRGCYC 2 cut(s) 614, 1337
FspBI CTAG 9 cut(s) 29, 468, 504, 578, 840, 846, 858, 876, 1137
GlaI GCGC 4 cut(s) 200, 336, 447, 1194
GsaI CCCAGC 4 cut(s) 341, 1293, 1394, 1556
GsuI CTGGAG 5 cut(s) 197, 672, 735, 916, 1062
HaeII RGCGCY 1 cut(s) 338
HaeIII GGCC 6 cut(s) 231, 551, 800, 1169, 1335, 1551
HapII CCGG 2 cut(s) 351, 1434
HhaI GCGC 4 cut(s) 201, 337, 448, 1195
Hin1I GRCGYC 1 cut(s) 305
Hin1II CATG 5 cut(s) 454, 1087, 1330, 1372, 1512
Hin6I GCGC 4 cut(s) 199, 335, 446, 1193
HinP1I GCGC 4 cut(s) 199, 335, 446, 1193
HinfI GANTC 1 cut(s) 1502
HpaII CCGG 2 cut(s) 351, 1434
HphI GGTGA 2 cut(s) 136, 340
Hpy166II GTNNAC 3 cut(s) 289, 316, 1520
Hpy188I TCNGA 6 cut(s) 67, 150, 279, 436, 603, 712
Hpy188III TCNNGA 3 cut(s) 48, 113, 1327
Hpy8I GTNNAC 3 cut(s) 289, 316, 1520
Hpy99I CGWCG 4 cut(s) 160, 271, 310, 784
HpyAV CCTTC 5 cut(s) 436, 678, 882, 1391, 1508
HpyCH4III ACNGT 4 cut(s) 135, 164, 738, 1282
HpyCH4IV ACGT 5 cut(s) 291, 305, 761, 971, 1172
HpyF3I CTNAG 3 cut(s) 251, 709, 1071
HpySE526I ACGT 5 cut(s) 291, 305, 761, 971, 1172
Hsp92I GRCGYC 1 cut(s) 305
Hsp92II CATG 5 cut(s) 454, 1087, 1330, 1372, 1512
HspAI GCGC 4 cut(s) 199, 335, 446, 1193
Ksp22I TGATCA 1 cut(s) 1036
Kzo9I GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
LmnI GCTCC 7 cut(s) 67, 222, 874, 1019, 1081, 1107, 1298
LweI GCATC 2 cut(s) 532, 650
MaeI CTAG 9 cut(s) 29, 468, 504, 578, 840, 846, 858, 876, 1137
MaeII ACGT 5 cut(s) 291, 305, 761, 971, 1172
MalI GATC 6 cut(s) 111, 128, 179, 345, 1038, 1323
MbiI CCGCTC 1 cut(s) 406
MboI GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
MboII GAAGA 9 cut(s) 12, 86, 94, 400, 427, 466, 1015, 1142, 1511
MflI RGATCY 2 cut(s) 109, 177
MhlI GDGCHC 5 cut(s) 318, 413, 614, 1337, 1522
MlsI TGGCCA 1 cut(s) 1169
MluCI AATT 5 cut(s) 16, 713, 826, 907, 1453
MluNI TGGCCA 1 cut(s) 1169
MlyI GAGTC 1 cut(s) 1511
MmeI TCCRAC 2 cut(s) 626, 1029
Mox20I TGGCCA 1 cut(s) 1169
MroXI GAANNNNTTC 1 cut(s) 164
MscI TGGCCA 1 cut(s) 1169
MseI TTAA 2 cut(s) 357, 767
Msp20I TGGCCA 1 cut(s) 1169
MspA1I CMGCKG 2 cut(s) 1130, 1289
MspI CCGG 2 cut(s) 351, 1434
MspR9I CCNGG 3 cut(s) 99, 352, 1190
Mva1269I GAATGC 1 cut(s) 108
MvaI CCWGG 2 cut(s) 99, 1190
MvnI CGCG 3 cut(s) 201, 425, 1377
NciI CCSGG 1 cut(s) 352
NdeI CATATG 1 cut(s) 1486
NdeII GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
NheI GCTAGC 1 cut(s) 857
NlaIII CATG 5 cut(s) 454, 1087, 1330, 1372, 1512
NlaIV GGNNCC 6 cut(s) 69, 194, 966, 1015, 1077, 1335
NmeAIII GCCGAG 1 cut(s) 577
PagI TCATGA 1 cut(s) 1326
PcsI WCGNNNNNNNCGW 3 cut(s) 297, 767, 776
PctI GAATGC 1 cut(s) 108
PdmI GAANNNNTTC 1 cut(s) 164
PfoI TCCNGGA 1 cut(s) 97
PleI GAGTC 1 cut(s) 1510
PmaCI CACGTG 1 cut(s) 762
PmlI CACGTG 1 cut(s) 762
PpsI GAGTC 1 cut(s) 1510
Ppu21I YACGTR 1 cut(s) 762
Psp6I CCWGG 2 cut(s) 97, 1188
PspCI CACGTG 1 cut(s) 762
PspFI CCCAGC 4 cut(s) 337, 1289, 1390, 1552
PspGI CCWGG 2 cut(s) 97, 1188
PspN4I GGNNCC 6 cut(s) 69, 194, 966, 1015, 1077, 1335
PspOMI GGGCCC 1 cut(s) 1333
PspPI GGNCC 3 cut(s) 1333, 1334, 1550
PstNI CAGNNNCTG 1 cut(s) 113
PsuI RGATCY 2 cut(s) 109, 177
PvuII CAGCTG 2 cut(s) 1130, 1289
RsaI GTAC 5 cut(s) 422, 476, 775, 844, 880
RsaNI GTAC 5 cut(s) 421, 475, 774, 843, 879
SaqAI TTAA 2 cut(s) 357, 767
Sau3AI GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
Sau96I GGNCC 3 cut(s) 1333, 1334, 1550
ScaI AGTACT 2 cut(s) 844, 880
SchI GAGTC 1 cut(s) 1511
ScrFI CCNGG 3 cut(s) 99, 352, 1190
SduI GDGCHC 5 cut(s) 318, 413, 614, 1337, 1522
SfaNI GCATC 2 cut(s) 532, 650
SpeI ACTAGT 4 cut(s) 28, 839, 845, 1136
Sse9I AATT 5 cut(s) 16, 713, 826, 907, 1453
SspMI CTAG 9 cut(s) 29, 468, 504, 578, 840, 846, 858, 876, 1137
StyD4I CCNGG 3 cut(s) 97, 350, 1188
StyI CCWWGG 2 cut(s) 546, 577
TaaI ACNGT 4 cut(s) 135, 164, 738, 1282
TaiI ACGT 5 cut(s) 294, 308, 764, 974, 1175
TaqI TCGA 1 cut(s) 413
TasI AATT 5 cut(s) 16, 713, 826, 907, 1453
TatI WGTACW 3 cut(s) 474, 842, 878
TauI GCSGC 5 cut(s) 465, 649, 905, 1186, 1266
Tru1I TTAA 2 cut(s) 357, 767
Tru9I TTAA 2 cut(s) 357, 767
TscAI CASTG 3 cut(s) 138, 1223, 1426
TspDTI ATGAA 3 cut(s) 467, 508, 1416
TspGWI ACGGA 1 cut(s) 284
TspRI CASTG 3 cut(s) 138, 1223, 1426
VneI GTGCAC 2 cut(s) 314, 1518
XapI RAATTY 1 cut(s) 713
XmaJI CCTAGG 1 cut(s) 577
XmnI GAANNNNTTC 1 cut(s) 164
XspI CTAG 9 cut(s) 29, 468, 504, 578, 840, 846, 858, 876, 1137
ZraI GACGTC 1 cut(s) 306
ZrmI AGTACT 2 cut(s) 844, 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.