Rroxscaffold_7G00167480

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0013791
Physical Location & Seq
Forward (+)
8607807 .. 8611071
3265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00167480.1

Sequence Viewer

Length: 1554 bp
ATGGGCGACCTTGACAATTCTTCATCACTAGTTGGTTCTACCGCTTCAGGAGAAGCTACTTTTTCGGAGCCTCCTGCCAAGAAGAAGCGAAATCTTCCTGGAATGCCAGATCCTGAAGCGGAGGTGATCGCTCTGTCGCCGAAAACTCTGATGGCGACGAACCGTTTCGTGTGCGAGATCTGCAACAAAGGGTTCCAGCGCGACCAGAACCTCCAGCTCCACCGGCGAGGCCACAACCTGCCGTGGAAGCTGAGGCAGCGAACCACGACGGAGGTTCGGAAGCGGGTTTACGTCTGCCCCGAGACGTCGTGCGTGCACCACAACCCGACCCGAGCTCTGGGCGATCTCACCGGGATTAAGAAGCACTTTTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAGCGGTGCTCGAAGAAGTACGCGGTGCAATCTGATTGGAAGGCGCACATGAAGACCTGCGGCACTCGAGAGTACAAATGTGATTGTGGAACTTTGTTCTCTAGGAGGGATAGCTTCATAACGCATAGGGCTTTCTGTGACGCCTTGGCCGAGGAGAGTGCTAAGGCTCAAACCCTAGGAAGCTCGCAGCTGGCAAACCCGAACCCGAATGCTGGAAAGGCGGTTGTGGTGGCCTCGCCGCCTCCACCGCCTCTCACACCTTCCAATAATGTGGTGTCTCCAGCTCTATCCATTCAAAGCTCAGAATTCCCAGAAAACCCAGTAGGACTGTCGCCGCCACCTCCAGCAACCACGTGCTTAACGAGTACCACGACGGCGATCAGCACCACCGCCACCACCACCACCTCAACTGGAAATTGCAGTAACACTAGTACTAGTGTATTTGCTAGCATATTTGCTCCTTCTAGTACTGCCTCACAAACATCAGCAGCTGCTAATTCCTCATACTCCAATATAGTCTCCAGTTCTGCAATCCCATCAGCCTCCGCCATGGAACCAACGTCTCTCTCACTCTCCACCTCTCTATACCTATCCAACAATGGCTCCACCCTCTTCTCAACTGCTGATCAGCAAGACCATCGCCAGTATGTAGCTTCCCCGCAGGCTCCAGCCATGTCTGCCACGGCATTGCTCCAAAAAGCAGCCCAAATGGGTGCAGCTGCGACTAGTGGGTCTTTTCTTCGTGGCTTTGGCTTGGCCACGTCCTCATCGCCGCCTCAGGCGCAAGATAGTCCCACCTCTTTGCAGTGGAGCAACAACAGCCACAGCCAGCAGCACAAGAGAGATGGTAGTGGCGGTGCTGCTGCCACAGTAGCAGCTGGGCTTGGAGCAAGTTCTGCCCTATTGACTGATCTCATGATGGGCCCACCTGTGCCGTTTGGGGGTCATCATCAGCCCATGACCCGCGACCTTCTTGGGCTAGGTATAGGGGCTAATGGTGGGGGTGGCAGTGCTTCATCCGCCGGCCTATCTGCTTTACTCAATTCGTTCGGCGGTGGAGGTTATACTACATATGCAAGGGGAGAACAGTCGTCATGGGAAGGGGCACAGGAGAGGAAACCTAATACTGCTAATGGCCCAGCCTTGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz zf-met

Protein Analysis

517

Amino Acids

53.97

Weight (kDa)

9.12

Isoelectric Point (pI)

52.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 93 - 127 1.5e-21 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 131 - 155 3.1e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 158 - 195 1.7e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013791)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g40030
malus_domestica MD08G1033100.v1.1 MD15G1029700.v1.1
prunus_persica Prupe.1G381800_v2.0.a1
pyrus_communis pycom08g02620 pycom12g10450 pycom15g02610
rosa_chinensis RchiOBHm_Chr6g0300721
rosa_laevigata RLG00000011308
rosa_multiflora Rmu_co8477681.1_g000001
rosa_roxburghii Rroxscaffold_7G00167480
rosa_rugosa Rorug06G0298700
rosa_samantha Rh6AG411300 Rh6BG418600 Rh6CG426000 Rh6DG411500
rosa_wichuraiana Rw6G036000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1132
AatII GACGTC 1 cut(s) 308
Acc36I ACCTGC 2 cut(s) 246, 467
AccBSI CCGCTC 1 cut(s) 406
AccII CGCG 3 cut(s) 201, 425, 1368
AclWI GGATC 1 cut(s) 104
AcoI YGGCCR 2 cut(s) 549, 1158
AcsI RAATTY 1 cut(s) 707
AcuI CTGAAG 2 cut(s) 30, 135
AcvI CACGTG 1 cut(s) 756
AcyI GRCGYC 2 cut(s) 305, 543
AfaI GTAC 5 cut(s) 422, 476, 769, 835, 871
AfiI CCNNNNNNNGG 3 cut(s) 337, 614, 1343
AgsI TTSAA 1 cut(s) 698
AhlI ACTAGT 4 cut(s) 28, 830, 836, 1127
AjiI CACGTC 1 cut(s) 1164
AjnI CCWGG 1 cut(s) 97
Alw21I GWGCWC 3 cut(s) 318, 337, 413
Alw26I GTCTC 4 cut(s) 296, 684, 925, 969
Alw44I GTGCAC 1 cut(s) 314
AlwI GGATC 1 cut(s) 104
AlwNI CAGNNNCTG 2 cut(s) 113, 893
Ama87I CYCGRG 3 cut(s) 299, 330, 468
AoxI GGCC 7 cut(s) 229, 549, 633, 1158, 1324, 1426, 1537
ApaI GGGCCC 1 cut(s) 1328
ApaLI GTGCAC 1 cut(s) 314
ApoI RAATTY 1 cut(s) 707
Asp700I GAANNNNTTC 1 cut(s) 164
AspA2I CCTAGG 1 cut(s) 577
AspLEI GCGC 3 cut(s) 201, 448, 1186
AspS9I GGNCC 3 cut(s) 1324, 1325, 1538
AsuC2I CCSGG 1 cut(s) 352
AsuHPI GGTGA 2 cut(s) 136, 340
AsuNHI GCTAGC 1 cut(s) 848
AvaI CYCGRG 3 cut(s) 299, 330, 468
AvrII CCTAGG 1 cut(s) 577
AxyI CCTNAGG 1 cut(s) 1179
BaeGI GKGCMC 3 cut(s) 318, 1328, 1510
BalI TGGCCA 1 cut(s) 1160
BanII GRGCYC 2 cut(s) 337, 1328
BarI GAAGNNNNNNTAC 2 cut(s) 272, 304
BbrPI CACGTG 1 cut(s) 756
BbsI GAAGAC 1 cut(s) 461
Bbv12I GWGCWC 3 cut(s) 318, 337, 413
BbvCI CCTCAGC 1 cut(s) 251
BccI CCATC 5 cut(s) 145, 946, 1047, 1241, 1315
BceAI ACGGC 5 cut(s) 226, 397, 792, 1101, 1321
BcgI CGANNNNNNTGC 4 cut(s) 542, 576, 1022, 1056
BciT130I CCWGG 1 cut(s) 99
BclI TGATCA 1 cut(s) 1027
BcnI CCSGG 1 cut(s) 352
BcoDI GTCTC 4 cut(s) 296, 684, 925, 969
BcuI ACTAGT 4 cut(s) 28, 830, 836, 1127
BfaI CTAG 9 cut(s) 29, 504, 578, 831, 837, 849, 867, 1128, 1382
BfuAI ACCTGC 2 cut(s) 246, 467
BglII AGATCT 1 cut(s) 177
BlnI CCTAGG 1 cut(s) 577
BmcAI AGTACT 2 cut(s) 835, 871
Bme1390I CCNGG 2 cut(s) 99, 352
BmeT110I CYCGRG 3 cut(s) 299, 330, 468
BmgBI CACGTC 1 cut(s) 1164
BmgT120I GGNCC 3 cut(s) 1324, 1325, 1538
BmiI GGNNCC 6 cut(s) 69, 194, 957, 1006, 1068, 1326
BmrFI CCNGG 2 cut(s) 99, 352
BmrI ACTGGG 1 cut(s) 716
BmtI GCTAGC 1 cut(s) 852
BmuI ACTGGG 1 cut(s) 716
BpiI GAAGAC 1 cut(s) 461
BplI GAGNNNNNCTC 2 cut(s) 395, 427
BpmI CTGGAG 5 cut(s) 197, 666, 729, 907, 1053
Bpu10I CCTNAGC 2 cut(s) 251, 564
BpuMI CCSGG 1 cut(s) 352
BsaAI YACGTR 1 cut(s) 756
BsaHI GRCGYC 2 cut(s) 305, 543
BsaJI CCNNGG 6 cut(s) 242, 546, 552, 577, 951, 1083
BsaXI ACNNNNNCTCC 2 cut(s) 989, 1019
Bsc4I CCNNNNNNNGG 3 cut(s) 337, 614, 1343
Bse118I RCCGGY 2 cut(s) 222, 1424
Bse1I ACTGG 4 cut(s) 722, 817, 924, 1045
Bse21I CCTNAGG 1 cut(s) 1179
Bse3DI GCAATG 1 cut(s) 1088
BseBI CCWGG 1 cut(s) 99
BseDI CCNNGG 6 cut(s) 242, 546, 552, 577, 951, 1083
BseGI GGATG 1 cut(s) 1418
BseLI CCNNNNNNNGG 3 cut(s) 337, 614, 1343
BseMI GCAATG 1 cut(s) 1088
BseMII CTCAG 3 cut(s) 242, 717, 1193
BseNI ACTGG 4 cut(s) 722, 817, 924, 1045
BseRI GAGGAG 1 cut(s) 569
BseSI GKGCMC 3 cut(s) 318, 1328, 1510
BseYI CCCAGC 2 cut(s) 1280, 1540
BsgI GTGCAG 1 cut(s) 1137
Bsh1236I CGCG 3 cut(s) 201, 425, 1368
BshFI GGCC 7 cut(s) 231, 551, 635, 1160, 1326, 1428, 1539
BsiHKAI GWGCWC 3 cut(s) 318, 337, 413
BsiHKCI CYCGRG 3 cut(s) 299, 330, 468
BsiSI CCGG 3 cut(s) 223, 351, 1425
BslFI GGGAC 1 cut(s) 1179
BslI CCNNNNNNNGG 3 cut(s) 337, 614, 1343
BsmAI GTCTC 4 cut(s) 296, 684, 925, 969
BsmBI CGTCTC 2 cut(s) 296, 969
BsmFI GGGAC 1 cut(s) 1179
BsmI GAATGC 2 cut(s) 108, 616
BsnI GGCC 7 cut(s) 231, 551, 635, 1160, 1326, 1428, 1539
BsoBI CYCGRG 3 cut(s) 299, 330, 468
Bsp120I GGGCCC 1 cut(s) 1324
Bsp1286I GDGCHC 5 cut(s) 318, 337, 413, 1328, 1510
Bsp143I GATC 7 cut(s) 109, 126, 177, 343, 780, 1027, 1312
Bsp19I CCATGG 1 cut(s) 951
BspANI GGCC 7 cut(s) 231, 551, 635, 1160, 1326, 1428, 1539
BspCNI CTCAG 3 cut(s) 243, 716, 1192
BspFNI CGCG 3 cut(s) 201, 425, 1368
BspHI TCATGA 1 cut(s) 1317
BspLI GGNNCC 6 cut(s) 69, 194, 957, 1006, 1068, 1326
BspMI ACCTGC 2 cut(s) 246, 467
BspOI GCTAGC 1 cut(s) 852
BspPI GGATC 1 cut(s) 104
BsrBI CCGCTC 1 cut(s) 406
BsrDI GCAATG 1 cut(s) 1088
BsrFI RCCGGY 2 cut(s) 222, 1424
BsrI ACTGG 4 cut(s) 722, 817, 924, 1045
BssAI RCCGGY 2 cut(s) 222, 1424
BssECI CCNNGG 6 cut(s) 242, 546, 552, 577, 951, 1083
BssMI GATC 7 cut(s) 109, 126, 177, 343, 780, 1027, 1312
BssNI GRCGYC 2 cut(s) 305, 543
BssT1I CCWWGG 3 cut(s) 546, 577, 951
Bst2UI CCWGG 1 cut(s) 99
Bst4CI ACNGT 4 cut(s) 164, 732, 1273, 1491
Bst6I CTCTTC 1 cut(s) 1019
BstACI GRCGYC 2 cut(s) 305, 543
BstAPI GCANNNNNTGC 1 cut(s) 1298
BstBAI YACGTR 1 cut(s) 756
BstC8I GCNNGC 8 cut(s) 314, 404, 587, 594, 850, 1065, 1232, 1426
BstDEI CTNAG 4 cut(s) 251, 564, 703, 1179
BstDSI CCRYGG 3 cut(s) 242, 951, 1083
BstF5I GGATG 1 cut(s) 1418
BstFNI CGCG 3 cut(s) 201, 425, 1368
BstHHI GCGC 3 cut(s) 201, 448, 1186
BstKTI GATC 7 cut(s) 112, 129, 180, 346, 783, 1030, 1315
BstMAI GTCTC 4 cut(s) 296, 684, 925, 969
BstMBI GATC 7 cut(s) 109, 126, 177, 343, 780, 1027, 1312
BstNI CCWGG 1 cut(s) 99
BstSCI CCNGG 2 cut(s) 97, 350
BstSLI GKGCMC 3 cut(s) 318, 1328, 1510
BstUI CGCG 3 cut(s) 201, 425, 1368
BstV2I GAAGAC 1 cut(s) 461
BstX2I RGATCY 2 cut(s) 109, 177
BstXI CCANNNNNNTGG 1 cut(s) 673
BstYI RGATCY 2 cut(s) 109, 177
Bsu36I CCTNAGG 1 cut(s) 1179
BsuRI GGCC 7 cut(s) 231, 551, 635, 1160, 1326, 1428, 1539
BtgI CCRYGG 3 cut(s) 242, 951, 1083
BtgZI GCGATG 2 cut(s) 1025, 1155
BtrI CACGTC 1 cut(s) 1164
BtsCI GGATG 1 cut(s) 1418
BtsI GCAGTG 2 cut(s) 1214, 1417
BtsIMutI CAGTG 2 cut(s) 1214, 1417
BveI ACCTGC 2 cut(s) 246, 467
Cac8I GCNNGC 8 cut(s) 314, 404, 587, 594, 850, 1065, 1232, 1426
CaiI CAGNNNCTG 2 cut(s) 113, 893
CciI TCATGA 1 cut(s) 1317
CfoI GCGC 3 cut(s) 201, 448, 1186
Cfr10I RCCGGY 2 cut(s) 222, 1424
Cfr13I GGNCC 3 cut(s) 1324, 1325, 1538
CseI GACGC 1 cut(s) 551
Csp6I GTAC 5 cut(s) 421, 475, 768, 834, 870
CviAII CATG 6 cut(s) 451, 952, 1075, 1318, 1360, 1497
CviQI GTAC 5 cut(s) 421, 475, 768, 834, 870
DdeI CTNAG 4 cut(s) 251, 564, 703, 1179
DpnI GATC 7 cut(s) 111, 128, 179, 345, 782, 1029, 1314
DpnII GATC 7 cut(s) 109, 126, 177, 343, 780, 1027, 1312
DrdI GACNNNNNNGTC 1 cut(s) 1132
DseDI GACNNNNNNGTC 1 cut(s) 1132
EaeI YGGCCR 2 cut(s) 549, 1158
Eam1104I CTCTTC 1 cut(s) 1019
EarI CTCTTC 1 cut(s) 1019
EciI GGCGGA 2 cut(s) 937, 1411
Ecl136II GAGCTC 1 cut(s) 335
Eco130I CCWWGG 3 cut(s) 546, 577, 951
Eco24I GRGCYC 2 cut(s) 337, 1328
Eco53kI GAGCTC 1 cut(s) 335
Eco57I CTGAAG 2 cut(s) 30, 135
Eco72I CACGTG 1 cut(s) 756
Eco81I CCTNAGG 1 cut(s) 1179
Eco88I CYCGRG 3 cut(s) 299, 330, 468
EcoICRI GAGCTC 1 cut(s) 335
EcoRI GAATTC 1 cut(s) 707
EcoRII CCWGG 1 cut(s) 97
EcoT14I CCWWGG 3 cut(s) 546, 577, 951
EcoT38I GRGCYC 2 cut(s) 337, 1328
ErhI CCWWGG 3 cut(s) 546, 577, 951
Esp3I CGTCTC 2 cut(s) 296, 969
FaeI CATG 6 cut(s) 454, 955, 1078, 1321, 1363, 1500
FalI AAGNNNNNCTT 2 cut(s) 350, 382
FaqI GGGAC 1 cut(s) 1179
FatI CATG 6 cut(s) 450, 951, 1074, 1317, 1359, 1496
FauI CCCGC 3 cut(s) 276, 1068, 1373
FauNDI CATATG 1 cut(s) 1474
FbaI TGATCA 1 cut(s) 1027
FokI GGATG 1 cut(s) 1405
FriOI GRGCYC 2 cut(s) 337, 1328
FspBI CTAG 9 cut(s) 29, 504, 578, 831, 837, 849, 867, 1128, 1382
GlaI GCGC 3 cut(s) 200, 447, 1185
GsaI CCCAGC 2 cut(s) 1284, 1544
GsuI CTGGAG 5 cut(s) 197, 666, 729, 907, 1053
HaeIII GGCC 7 cut(s) 231, 551, 635, 1160, 1326, 1428, 1539
HapII CCGG 3 cut(s) 223, 351, 1425
HgaI GACGC 1 cut(s) 551
HhaI GCGC 3 cut(s) 201, 448, 1186
Hin1I GRCGYC 2 cut(s) 305, 543
Hin1II CATG 6 cut(s) 454, 955, 1078, 1321, 1363, 1500
Hin6I GCGC 3 cut(s) 199, 446, 1184
HinP1I GCGC 3 cut(s) 199, 446, 1184
HpaII CCGG 3 cut(s) 223, 351, 1425
HphI GGTGA 2 cut(s) 136, 340
Hpy166II GTNNAC 2 cut(s) 289, 316
Hpy188I TCNGA 5 cut(s) 67, 150, 279, 436, 706
Hpy188III TCNNGA 4 cut(s) 48, 113, 470, 1318
Hpy8I GTNNAC 2 cut(s) 289, 316
Hpy99I CGWCG 4 cut(s) 160, 271, 310, 778
HpyAV CCTTC 5 cut(s) 436, 672, 873, 1382, 1496
HpyCH4III ACNGT 4 cut(s) 164, 732, 1273, 1491
HpyCH4IV ACGT 5 cut(s) 291, 305, 755, 962, 1163
HpyCH4V TGCA 9 cut(s) 183, 316, 372, 430, 822, 932, 1118, 1207, 1478
HpyF3I CTNAG 4 cut(s) 251, 564, 703, 1179
HpySE526I ACGT 5 cut(s) 291, 305, 755, 962, 1163
Hsp92I GRCGYC 2 cut(s) 305, 543
Hsp92II CATG 6 cut(s) 454, 955, 1078, 1321, 1363, 1500
HspAI GCGC 3 cut(s) 199, 446, 1184
KroI GCCGGC 1 cut(s) 1424
KroNI GCCGGC 1 cut(s) 1426
Ksp22I TGATCA 1 cut(s) 1027
Kzo9I GATC 7 cut(s) 109, 126, 177, 343, 780, 1027, 1312
LmnI GCTCC 8 cut(s) 67, 222, 865, 1010, 1072, 1098, 1212, 1289
MaeI CTAG 9 cut(s) 29, 504, 578, 831, 837, 849, 867, 1128, 1382
MaeII ACGT 5 cut(s) 291, 305, 755, 962, 1163
MaeIII GTNAC 2 cut(s) 539, 824
MalI GATC 7 cut(s) 111, 128, 179, 345, 782, 1029, 1314
MbiI CCGCTC 1 cut(s) 406
MboI GATC 7 cut(s) 109, 126, 177, 343, 780, 1027, 1312
MboII GAAGA 8 cut(s) 12, 86, 94, 400, 427, 466, 1006, 1133
MflI RGATCY 2 cut(s) 109, 177
MhlI GDGCHC 5 cut(s) 318, 337, 413, 1328, 1510
MlsI TGGCCA 1 cut(s) 1160
MluCI AATT 5 cut(s) 16, 707, 817, 898, 1444
MluNI TGGCCA 1 cut(s) 1160
MmeI TCCRAC 1 cut(s) 1020
Mox20I TGGCCA 1 cut(s) 1160
MroNI GCCGGC 1 cut(s) 1424
MroXI GAANNNNTTC 1 cut(s) 164
MscI TGGCCA 1 cut(s) 1160
MseI TTAA 2 cut(s) 357, 761
Msp20I TGGCCA 1 cut(s) 1160
MspA1I CMGCKG 4 cut(s) 592, 893, 1121, 1280
MspI CCGG 3 cut(s) 223, 351, 1425
MspR9I CCNGG 2 cut(s) 99, 352
Mva1269I GAATGC 2 cut(s) 108, 616
MvaI CCWGG 1 cut(s) 99
MvnI CGCG 3 cut(s) 201, 425, 1368
NaeI GCCGGC 1 cut(s) 1426
NciI CCSGG 1 cut(s) 352
NcoI CCATGG 1 cut(s) 951
NdeI CATATG 1 cut(s) 1474
NdeII GATC 7 cut(s) 109, 126, 177, 343, 780, 1027, 1312
NgoMIV GCCGGC 1 cut(s) 1424
NheI GCTAGC 1 cut(s) 848
NlaIII CATG 6 cut(s) 454, 955, 1078, 1321, 1363, 1500
NlaIV GGNNCC 6 cut(s) 69, 194, 957, 1006, 1068, 1326
NmeAIII GCCGAG 1 cut(s) 577
NmuCI GTSAC 1 cut(s) 539
PaeR7I CTCGAG 1 cut(s) 468
PagI TCATGA 1 cut(s) 1317
PcsI WCGNNNNNNNCGW 4 cut(s) 297, 549, 761, 770
PctI GAATGC 2 cut(s) 108, 616
PdiI GCCGGC 1 cut(s) 1426
PdmI GAANNNNTTC 1 cut(s) 164
PfoI TCCNGGA 1 cut(s) 97
PmaCI CACGTG 1 cut(s) 756
PmlI CACGTG 1 cut(s) 756
Ppu21I YACGTR 1 cut(s) 756
Psp124BI GAGCTC 1 cut(s) 337
Psp6I CCWGG 1 cut(s) 97
PspCI CACGTG 1 cut(s) 756
PspFI CCCAGC 2 cut(s) 1280, 1540
PspGI CCWGG 1 cut(s) 97
PspN4I GGNNCC 6 cut(s) 69, 194, 957, 1006, 1068, 1326
PspOMI GGGCCC 1 cut(s) 1324
PspPI GGNCC 3 cut(s) 1324, 1325, 1538
PstNI CAGNNNCTG 2 cut(s) 113, 893
PsuI RGATCY 2 cut(s) 109, 177
PvuII CAGCTG 4 cut(s) 592, 893, 1121, 1280
RsaI GTAC 5 cut(s) 422, 476, 769, 835, 871
RsaNI GTAC 5 cut(s) 421, 475, 768, 834, 870
SacI GAGCTC 1 cut(s) 337
SaqAI TTAA 2 cut(s) 357, 761
Sau3AI GATC 7 cut(s) 109, 126, 177, 343, 780, 1027, 1312
Sau96I GGNCC 3 cut(s) 1324, 1325, 1538
ScaI AGTACT 2 cut(s) 835, 871
ScrFI CCNGG 2 cut(s) 99, 352
SduI GDGCHC 5 cut(s) 318, 337, 413, 1328, 1510
Sfr274I CTCGAG 1 cut(s) 468
SgrAI CRCCGGYG 1 cut(s) 222
SlaI CTCGAG 1 cut(s) 468
SmlI CTYRAG 1 cut(s) 468
SmoI CTYRAG 1 cut(s) 468
SpeI ACTAGT 4 cut(s) 28, 830, 836, 1127
Sse9I AATT 5 cut(s) 16, 707, 817, 898, 1444
SspMI CTAG 9 cut(s) 29, 504, 578, 831, 837, 849, 867, 1128, 1382
SstI GAGCTC 1 cut(s) 337
StyD4I CCNGG 2 cut(s) 97, 350
StyI CCWWGG 3 cut(s) 546, 577, 951
TaaI ACNGT 4 cut(s) 164, 732, 1273, 1491
TaiI ACGT 5 cut(s) 294, 308, 758, 965, 1166
TaqI TCGA 2 cut(s) 413, 469
TasI AATT 5 cut(s) 16, 707, 817, 898, 1444
TatI WGTACW 3 cut(s) 474, 833, 869
TauI GCSGC 4 cut(s) 465, 643, 739, 1177
Tru1I TTAA 2 cut(s) 357, 761
Tru9I TTAA 2 cut(s) 357, 761
TscAI CASTG 2 cut(s) 1214, 1417
TseFI GTSAC 1 cut(s) 539
Tsp45I GTSAC 1 cut(s) 539
TspDTI ATGAA 4 cut(s) 12, 467, 508, 1407
TspGWI ACGGA 1 cut(s) 284
TspRI CASTG 2 cut(s) 1214, 1417
VneI GTGCAC 1 cut(s) 314
XapI RAATTY 1 cut(s) 707
XhoI CTCGAG 1 cut(s) 468
XmaJI CCTAGG 1 cut(s) 577
XmnI GAANNNNTTC 1 cut(s) 164
XspI CTAG 9 cut(s) 29, 504, 578, 831, 837, 849, 867, 1128, 1382
ZraI GACGTC 1 cut(s) 306
ZrmI AGTACT 2 cut(s) 835, 871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.