Rh6CG426000

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0013791
Physical Location & Seq
Reverse (-)
60853313 .. 60857664
4352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG426000.1

Sequence Viewer

Length: 1569 bp
ATGGGCGACCTTGACCTTGACATTTCTTCCTCACTAGTTGGTTCTACCGCTTCAGGAGAAGCTACTTTTTCGGAGCCGCCTGCCAAGAAGAAGCGAAATCTTCCCGGAATGCCAGATCCTGAAGCGGAGGTGATCGCTCTGTCGCCGAAAACTCTGATGGCGACGAACCGTTTCGTGTGCGAGATCTGCAACAAAGGGTTCCAGCGCGACCAAAACCTCCAGCTCCACCGCAGAGGCCACAACCTGCCGTGGAAGCTGAGGCAGCGAACCACGACGGAGGTTCGGAAGCGGGTTTACGTCTGCCCCGAGACGTCGTGCGTGCACCACAACCCGACCCGAGCGCTGGGCGATCTCACCGGGATTAAGAAGCACTTTTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAGCGGTGCTCGAAGAAGTACGCGGTGCAATCTGATTGGAAGGCGCACATGAAGACCTGCGGCACTAGAGAGTACAAATGTGATTGTGGAACTTTGTTCTCTAGGAGGGATAGCTTCATAACGCATAGGGCTTTCTGTGACGCCTTGGCCGAGGAGAGTGCTAAGGCTCAAACCCTAGGAAGCTCGCAGCTGGCAAATCCGAACCCGAGCCCGAATGCTGGAAAGGCGGTTGTGGTGGCATCGCCGCCTCCACCGCCTCTCACACCTTCCAATAATGTGGTGTCTCCAGCTCTATCCATTCAAAGCTCAGAATTCCCAGAAAACCCAGTAGGACTGTCGCCACCACCTCCAGCAACCACGTGCTTAACGAGTACCACGACGGCGATTAGCACCACGGCCACCACCACCACCTCAACTGGAAATTGCAGCAACACTAGTACTAGTGTATTTGCTAGCATATTTGCTCCTTCTAGTACTGCCTCACAAACATCAGCGGCCGCTAATTCCTCATACTCCAATATAGTCTCCAGTTCTGCAATCCCATCAGCCTCCTCTATGGAACCAACGTCTCTCTCACTCTCCACCTCTCTATACCTATCCAGCAATGGCTCCACCCTCTTCCCAACTGCTGATCAGCAAGACCATCGCCAGTATGTAGCTTCTCCTCAGGCTCCAGCCATGTCCGCCACGGCATTGCTCCAAAAAGCAGCCCAAATGGGTGCAGCTGCGACTAGTGGGTCTTTTCTTCGTGGCTTTGGCTTGGCCACGTCCTCATCGCCGCCCCAGGCGCAAGATAGCACCACCTCTTTGCAGTGGAGCAACAACAGCCACAGCCATCAGCACAAGAGAGATGGTAGCGGCGGTGCTGCTGCCACAGTAGCAGCTGGGCTTGGAGCAAGTTCTGCCCTATTGACTGATCTCATGATGGGCCCACCTGTGCCGTTTGGGGGTCATCATCAGCCCATGACCCGCGACCTTCTTGGGCTGGGCATAGGTGCTAATGGCGGGGGTGGCAGTGCTTCATCCGCCGGACTATCTGCTTTGCTCAATTCGTTCGGCGGTGGTGGAGGTTATACTACATATGCAAGGGGAGAAGAGTCGTCATGGGAAGGTGCACAGGAGAGGAAACCTAATACTGCTACTGGCCCAGCCTTGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz zf-met

Protein Analysis

522

Amino Acids

54.44

Weight (kDa)

8.98

Isoelectric Point (pI)

53.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 95 - 129 1.5e-21 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 133 - 157 3.1e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 160 - 197 1.8e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013791)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g40030
malus_domestica MD08G1033100.v1.1 MD15G1029700.v1.1
prunus_persica Prupe.1G381800_v2.0.a1
pyrus_communis pycom08g02620 pycom12g10450 pycom15g02610
rosa_chinensis RchiOBHm_Chr6g0300721
rosa_laevigata RLG00000011308
rosa_multiflora Rmu_co8477681.1_g000001
rosa_roxburghii Rroxscaffold_7G00167480
rosa_rugosa Rorug06G0298700
rosa_samantha Rh6AG411300 Rh6BG418600 Rh6CG426000 Rh6DG411500
rosa_wichuraiana Rw6G036000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1144
AatII GACGTC 1 cut(s) 314
Acc36I ACCTGC 2 cut(s) 252, 473
AccBSI CCGCTC 1 cut(s) 412
AccII CGCG 3 cut(s) 207, 431, 1380
AclWI GGATC 1 cut(s) 110
AcoI YGGCCR 4 cut(s) 555, 804, 903, 1170
AcsI RAATTY 1 cut(s) 719
AcuI CTGAAG 2 cut(s) 36, 141
AcvI CACGTG 1 cut(s) 768
AcyI GRCGYC 2 cut(s) 311, 549
AfaI GTAC 5 cut(s) 428, 482, 781, 847, 883
AfeI AGCGCT 1 cut(s) 342
AfiI CCNNNNNNNGG 3 cut(s) 343, 626, 1355
AgsI TTSAA 1 cut(s) 710
AhlI ACTAGT 4 cut(s) 34, 842, 848, 1139
AjiI CACGTC 1 cut(s) 1176
AjnI CCWGG 1 cut(s) 1191
Alw21I GWGCWC 3 cut(s) 324, 419, 1525
Alw26I GTCTC 4 cut(s) 302, 696, 937, 981
Alw44I GTGCAC 2 cut(s) 320, 1521
AlwI GGATC 1 cut(s) 110
AlwNI CAGNNNCTG 1 cut(s) 119
Ama87I CYCGRG 3 cut(s) 305, 336, 613
Aor51HI AGCGCT 1 cut(s) 342
AoxI GGCC 7 cut(s) 235, 555, 804, 903, 1170, 1336, 1552
ApaI GGGCCC 1 cut(s) 1340
ApaLI GTGCAC 2 cut(s) 320, 1521
ApeKI GCWGC 9 cut(s) 262, 595, 834, 1115, 1130, 1133, 1274, 1277, 1289
ApoI RAATTY 1 cut(s) 719
Asp700I GAANNNNTTC 1 cut(s) 170
AspA2I CCTAGG 1 cut(s) 583
AspLEI GCGC 4 cut(s) 207, 343, 454, 1198
AspS9I GGNCC 3 cut(s) 1336, 1337, 1553
AsuC2I CCSGG 2 cut(s) 105, 358
AsuHPI GGTGA 2 cut(s) 142, 346
AsuNHI GCTAGC 1 cut(s) 860
AvaI CYCGRG 3 cut(s) 305, 336, 613
AvrII CCTAGG 1 cut(s) 583
AxyI CCTNAGG 1 cut(s) 1074
BaeGI GKGCMC 3 cut(s) 324, 1340, 1525
BalI TGGCCA 1 cut(s) 1172
BanII GRGCYC 2 cut(s) 620, 1340
BarI GAAGNNNNNNTAC 2 cut(s) 278, 310
BbrPI CACGTG 1 cut(s) 768
BbsI GAAGAC 1 cut(s) 467
Bbv12I GWGCWC 3 cut(s) 324, 419, 1525
BbvCI CCTCAGC 1 cut(s) 257
BbvI GCAGC 9 cut(s) 274, 607, 846, 1120, 1127, 1142, 1261, 1264, 1301
BccI CCATC 6 cut(s) 151, 958, 1059, 1251, 1253, 1327
BceAI ACGGC 6 cut(s) 232, 403, 804, 819, 1113, 1333
BcgI CGANNNNNNTGC 4 cut(s) 548, 582, 1034, 1068
BciT130I CCWGG 1 cut(s) 1193
BclI TGATCA 1 cut(s) 1039
BcnI CCSGG 2 cut(s) 105, 358
BcoDI GTCTC 4 cut(s) 302, 696, 937, 981
BcuI ACTAGT 4 cut(s) 34, 842, 848, 1139
BfaI CTAG 9 cut(s) 35, 474, 510, 584, 843, 849, 861, 879, 1140
BfoI RGCGCY 1 cut(s) 344
BfuAI ACCTGC 2 cut(s) 252, 473
BglII AGATCT 1 cut(s) 183
BlnI CCTAGG 1 cut(s) 583
BmcAI AGTACT 2 cut(s) 847, 883
Bme1390I CCNGG 3 cut(s) 105, 358, 1193
BmeT110I CYCGRG 3 cut(s) 305, 336, 613
BmgBI CACGTC 1 cut(s) 1176
BmgT120I GGNCC 3 cut(s) 1336, 1337, 1553
BmiI GGNNCC 6 cut(s) 75, 200, 969, 1018, 1080, 1338
BmrFI CCNGG 3 cut(s) 105, 358, 1193
BmrI ACTGGG 1 cut(s) 728
BmsI GCATC 1 cut(s) 656
BmtI GCTAGC 1 cut(s) 864
BmuI ACTGGG 1 cut(s) 728
BpiI GAAGAC 1 cut(s) 467
BplI GAGNNNNNCTC 2 cut(s) 401, 433
BpmI CTGGAG 5 cut(s) 203, 678, 741, 919, 1065
Bpu10I CCTNAGC 2 cut(s) 257, 570
BpuMI CCSGG 2 cut(s) 105, 358
BsaAI YACGTR 1 cut(s) 768
BsaHI GRCGYC 2 cut(s) 311, 549
BsaJI CCNNGG 7 cut(s) 248, 552, 558, 583, 801, 1095, 1191
Bsc4I CCNNNNNNNGG 3 cut(s) 343, 626, 1355
Bse1I ACTGG 5 cut(s) 734, 829, 936, 1057, 1555
Bse21I CCTNAGG 1 cut(s) 1074
Bse3DI GCAATG 2 cut(s) 1018, 1100
BseBI CCWGG 1 cut(s) 1193
BseDI CCNNGG 7 cut(s) 248, 552, 558, 583, 801, 1095, 1191
BseGI GGATG 1 cut(s) 1430
BseLI CCNNNNNNNGG 3 cut(s) 343, 626, 1355
BseMI GCAATG 2 cut(s) 1018, 1100
BseMII CTCAG 3 cut(s) 248, 729, 1088
BseNI ACTGG 5 cut(s) 734, 829, 936, 1057, 1555
BseRI GAGGAG 3 cut(s) 575, 949, 1062
BseSI GKGCMC 3 cut(s) 324, 1340, 1525
BseX3I CGGCCG 1 cut(s) 903
BseXI GCAGC 9 cut(s) 274, 607, 846, 1120, 1127, 1142, 1261, 1264, 1301
BseYI CCCAGC 4 cut(s) 343, 1292, 1393, 1555
BsgI GTGCAG 1 cut(s) 1149
Bsh1236I CGCG 3 cut(s) 207, 431, 1380
Bsh1285I CGRYCG 1 cut(s) 906
BshFI GGCC 7 cut(s) 237, 557, 806, 905, 1172, 1338, 1554
BsiEI CGRYCG 1 cut(s) 906
BsiHKAI GWGCWC 3 cut(s) 324, 419, 1525
BsiHKCI CYCGRG 3 cut(s) 305, 336, 613
BsiSI CCGG 3 cut(s) 105, 357, 1437
BslI CCNNNNNNNGG 3 cut(s) 343, 626, 1355
BsmAI GTCTC 4 cut(s) 302, 696, 937, 981
BsmBI CGTCTC 2 cut(s) 302, 981
BsmI GAATGC 2 cut(s) 114, 628
BsnI GGCC 7 cut(s) 237, 557, 806, 905, 1172, 1338, 1554
BsoBI CYCGRG 3 cut(s) 305, 336, 613
Bsp120I GGGCCC 1 cut(s) 1336
Bsp1286I GDGCHC 5 cut(s) 324, 419, 620, 1340, 1525
Bsp143I GATC 6 cut(s) 115, 132, 183, 349, 1039, 1324
BspANI GGCC 7 cut(s) 237, 557, 806, 905, 1172, 1338, 1554
BspCNI CTCAG 3 cut(s) 249, 728, 1087
BspFNI CGCG 3 cut(s) 207, 431, 1380
BspHI TCATGA 1 cut(s) 1329
BspLI GGNNCC 6 cut(s) 75, 200, 969, 1018, 1080, 1338
BspMI ACCTGC 2 cut(s) 252, 473
BspOI GCTAGC 1 cut(s) 864
BspPI GGATC 1 cut(s) 110
BsrBI CCGCTC 1 cut(s) 412
BsrDI GCAATG 2 cut(s) 1018, 1100
BsrI ACTGG 5 cut(s) 734, 829, 936, 1057, 1555
BssECI CCNNGG 7 cut(s) 248, 552, 558, 583, 801, 1095, 1191
BssMI GATC 6 cut(s) 115, 132, 183, 349, 1039, 1324
BssNI GRCGYC 2 cut(s) 311, 549
BssT1I CCWWGG 2 cut(s) 552, 583
Bst2UI CCWGG 1 cut(s) 1193
Bst4CI ACNGT 3 cut(s) 170, 744, 1285
Bst6I CTCTTC 2 cut(s) 1031, 1497
BstACI GRCGYC 2 cut(s) 311, 549
BstAPI GCANNNNNTGC 1 cut(s) 1310
BstBAI YACGTR 1 cut(s) 768
BstC8I GCNNGC 6 cut(s) 81, 320, 410, 593, 600, 862
BstDEI CTNAG 4 cut(s) 257, 570, 715, 1074
BstDSI CCRYGG 3 cut(s) 248, 801, 1095
BstF5I GGATG 1 cut(s) 1430
BstFNI CGCG 3 cut(s) 207, 431, 1380
BstH2I RGCGCY 1 cut(s) 344
BstHHI GCGC 4 cut(s) 207, 343, 454, 1198
BstKTI GATC 6 cut(s) 118, 135, 186, 352, 1042, 1327
BstMAI GTCTC 4 cut(s) 302, 696, 937, 981
BstMBI GATC 6 cut(s) 115, 132, 183, 349, 1039, 1324
BstMCI CGRYCG 1 cut(s) 906
BstNI CCWGG 1 cut(s) 1193
BstSCI CCNGG 3 cut(s) 103, 356, 1191
BstSLI GKGCMC 3 cut(s) 324, 1340, 1525
BstUI CGCG 3 cut(s) 207, 431, 1380
BstV1I GCAGC 9 cut(s) 274, 607, 846, 1120, 1127, 1142, 1261, 1264, 1301
BstV2I GAAGAC 1 cut(s) 467
BstX2I RGATCY 2 cut(s) 115, 183
BstXI CCANNNNNNTGG 1 cut(s) 685
BstYI RGATCY 2 cut(s) 115, 183
BstZI CGGCCG 1 cut(s) 903
Bsu36I CCTNAGG 1 cut(s) 1074
BsuRI GGCC 7 cut(s) 237, 557, 806, 905, 1172, 1338, 1554
BtgI CCRYGG 3 cut(s) 248, 801, 1095
BtgZI GCGATG 3 cut(s) 633, 1037, 1167
BtrI CACGTC 1 cut(s) 1176
BtsCI GGATG 1 cut(s) 1430
BtsI GCAGTG 2 cut(s) 1226, 1429
BtsIMutI CAGTG 2 cut(s) 1226, 1429
BveI ACCTGC 2 cut(s) 252, 473
Cac8I GCNNGC 6 cut(s) 81, 320, 410, 593, 600, 862
CaiI CAGNNNCTG 1 cut(s) 119
CciI TCATGA 1 cut(s) 1329
CciNI GCGGCCGC 1 cut(s) 903
CfoI GCGC 4 cut(s) 207, 343, 454, 1198
Cfr13I GGNCC 3 cut(s) 1336, 1337, 1553
CseI GACGC 1 cut(s) 557
Csp6I GTAC 5 cut(s) 427, 481, 780, 846, 882
CviAII CATG 5 cut(s) 457, 1087, 1330, 1372, 1512
CviQI GTAC 5 cut(s) 427, 481, 780, 846, 882
DdeI CTNAG 4 cut(s) 257, 570, 715, 1074
DpnI GATC 6 cut(s) 117, 134, 185, 351, 1041, 1326
DpnII GATC 6 cut(s) 115, 132, 183, 349, 1039, 1324
DrdI GACNNNNNNGTC 1 cut(s) 1144
DseDI GACNNNNNNGTC 1 cut(s) 1144
EaeI YGGCCR 4 cut(s) 555, 804, 903, 1170
EagI CGGCCG 1 cut(s) 903
Eam1104I CTCTTC 2 cut(s) 1031, 1497
EarI CTCTTC 2 cut(s) 1031, 1497
EciI GGCGGA 2 cut(s) 1081, 1423
EclXI CGGCCG 1 cut(s) 903
Eco130I CCWWGG 2 cut(s) 552, 583
Eco24I GRGCYC 2 cut(s) 620, 1340
Eco47III AGCGCT 1 cut(s) 342
Eco52I CGGCCG 1 cut(s) 903
Eco57I CTGAAG 2 cut(s) 36, 141
Eco72I CACGTG 1 cut(s) 768
Eco81I CCTNAGG 1 cut(s) 1074
Eco88I CYCGRG 3 cut(s) 305, 336, 613
EcoRI GAATTC 1 cut(s) 719
EcoRII CCWGG 1 cut(s) 1191
EcoT14I CCWWGG 2 cut(s) 552, 583
EcoT38I GRGCYC 2 cut(s) 620, 1340
ErhI CCWWGG 2 cut(s) 552, 583
Esp3I CGTCTC 2 cut(s) 302, 981
FaeI CATG 5 cut(s) 460, 1090, 1333, 1375, 1515
FalI AAGNNNNNCTT 2 cut(s) 356, 388
FatI CATG 5 cut(s) 456, 1086, 1329, 1371, 1511
FauI CCCGC 3 cut(s) 282, 1385, 1406
FauNDI CATATG 1 cut(s) 1489
FbaI TGATCA 1 cut(s) 1039
FokI GGATG 1 cut(s) 1417
FriOI GRGCYC 2 cut(s) 620, 1340
FspBI CTAG 9 cut(s) 35, 474, 510, 584, 843, 849, 861, 879, 1140
GlaI GCGC 4 cut(s) 206, 342, 453, 1197
GsaI CCCAGC 4 cut(s) 347, 1296, 1397, 1559
GsuI CTGGAG 5 cut(s) 203, 678, 741, 919, 1065
HaeII RGCGCY 1 cut(s) 344
HaeIII GGCC 7 cut(s) 237, 557, 806, 905, 1172, 1338, 1554
HapII CCGG 3 cut(s) 105, 357, 1437
HgaI GACGC 1 cut(s) 557
HhaI GCGC 4 cut(s) 207, 343, 454, 1198
Hin1I GRCGYC 2 cut(s) 311, 549
Hin1II CATG 5 cut(s) 460, 1090, 1333, 1375, 1515
Hin6I GCGC 4 cut(s) 205, 341, 452, 1196
HinP1I GCGC 4 cut(s) 205, 341, 452, 1196
HinfI GANTC 1 cut(s) 1505
HpaII CCGG 3 cut(s) 105, 357, 1437
HphI GGTGA 2 cut(s) 142, 346
Hpy166II GTNNAC 3 cut(s) 295, 322, 1523
Hpy188I TCNGA 6 cut(s) 73, 156, 285, 442, 609, 718
Hpy188III TCNNGA 3 cut(s) 54, 119, 1330
Hpy8I GTNNAC 3 cut(s) 295, 322, 1523
Hpy99I CGWCG 4 cut(s) 166, 277, 316, 790
HpyAV CCTTC 5 cut(s) 442, 684, 885, 1394, 1511
HpyCH4III ACNGT 3 cut(s) 170, 744, 1285
HpyCH4IV ACGT 5 cut(s) 297, 311, 767, 974, 1175
HpyF3I CTNAG 4 cut(s) 257, 570, 715, 1074
HpySE526I ACGT 5 cut(s) 297, 311, 767, 974, 1175
Hsp92I GRCGYC 2 cut(s) 311, 549
Hsp92II CATG 5 cut(s) 460, 1090, 1333, 1375, 1515
HspAI GCGC 4 cut(s) 205, 341, 452, 1196
Ksp22I TGATCA 1 cut(s) 1039
Kzo9I GATC 6 cut(s) 115, 132, 183, 349, 1039, 1324
LmnI GCTCC 8 cut(s) 73, 228, 877, 1022, 1084, 1110, 1224, 1301
Lsp1109I GCAGC 9 cut(s) 274, 607, 846, 1120, 1127, 1142, 1261, 1264, 1301
LweI GCATC 1 cut(s) 656
MaeI CTAG 9 cut(s) 35, 474, 510, 584, 843, 849, 861, 879, 1140
MaeII ACGT 5 cut(s) 297, 311, 767, 974, 1175
MaeIII GTNAC 1 cut(s) 545
MalI GATC 6 cut(s) 117, 134, 185, 351, 1041, 1326
MbiI CCGCTC 1 cut(s) 412
MboI GATC 6 cut(s) 115, 132, 183, 349, 1039, 1324
MboII GAAGA 9 cut(s) 18, 92, 100, 406, 433, 472, 1018, 1145, 1514
MflI RGATCY 2 cut(s) 115, 183
MhlI GDGCHC 5 cut(s) 324, 419, 620, 1340, 1525
MlsI TGGCCA 1 cut(s) 1172
MluCI AATT 4 cut(s) 719, 829, 910, 1456
MluNI TGGCCA 1 cut(s) 1172
MlyI GAGTC 1 cut(s) 1514
Mox20I TGGCCA 1 cut(s) 1172
MroXI GAANNNNTTC 1 cut(s) 170
MscI TGGCCA 1 cut(s) 1172
MseI TTAA 2 cut(s) 363, 773
Msp20I TGGCCA 1 cut(s) 1172
MspA1I CMGCKG 4 cut(s) 598, 902, 1133, 1292
MspI CCGG 3 cut(s) 105, 357, 1437
MspR9I CCNGG 3 cut(s) 105, 358, 1193
Mva1269I GAATGC 2 cut(s) 114, 628
MvaI CCWGG 1 cut(s) 1193
MvnI CGCG 3 cut(s) 207, 431, 1380
NciI CCSGG 2 cut(s) 105, 358
NdeI CATATG 1 cut(s) 1489
NdeII GATC 6 cut(s) 115, 132, 183, 349, 1039, 1324
NheI GCTAGC 1 cut(s) 860
NlaIII CATG 5 cut(s) 460, 1090, 1333, 1375, 1515
NlaIV GGNNCC 6 cut(s) 75, 200, 969, 1018, 1080, 1338
NmeAIII GCCGAG 1 cut(s) 583
NmuCI GTSAC 1 cut(s) 545
NotI GCGGCCGC 1 cut(s) 903
PagI TCATGA 1 cut(s) 1329
PcsI WCGNNNNNNNCGW 4 cut(s) 303, 555, 773, 782
PctI GAATGC 2 cut(s) 114, 628
PdmI GAANNNNTTC 1 cut(s) 170
PfoI TCCNGGA 1 cut(s) 103
PleI GAGTC 1 cut(s) 1513
PmaCI CACGTG 1 cut(s) 768
PmlI CACGTG 1 cut(s) 768
PpsI GAGTC 1 cut(s) 1513
Ppu21I YACGTR 1 cut(s) 768
Psp6I CCWGG 1 cut(s) 1191
PspCI CACGTG 1 cut(s) 768
PspFI CCCAGC 4 cut(s) 343, 1292, 1393, 1555
PspGI CCWGG 1 cut(s) 1191
PspN4I GGNNCC 6 cut(s) 75, 200, 969, 1018, 1080, 1338
PspOMI GGGCCC 1 cut(s) 1336
PspPI GGNCC 3 cut(s) 1336, 1337, 1553
PstNI CAGNNNCTG 1 cut(s) 119
PsuI RGATCY 2 cut(s) 115, 183
PvuII CAGCTG 3 cut(s) 598, 1133, 1292
RsaI GTAC 5 cut(s) 428, 482, 781, 847, 883
RsaNI GTAC 5 cut(s) 427, 481, 780, 846, 882
SaqAI TTAA 2 cut(s) 363, 773
Sau3AI GATC 6 cut(s) 115, 132, 183, 349, 1039, 1324
Sau96I GGNCC 3 cut(s) 1336, 1337, 1553
ScaI AGTACT 2 cut(s) 847, 883
SchI GAGTC 1 cut(s) 1514
ScrFI CCNGG 3 cut(s) 105, 358, 1193
SduI GDGCHC 5 cut(s) 324, 419, 620, 1340, 1525
SfaNI GCATC 1 cut(s) 656
SpeI ACTAGT 4 cut(s) 34, 842, 848, 1139
Sse9I AATT 4 cut(s) 719, 829, 910, 1456
SspMI CTAG 9 cut(s) 35, 474, 510, 584, 843, 849, 861, 879, 1140
StyD4I CCNGG 3 cut(s) 103, 356, 1191
StyI CCWWGG 2 cut(s) 552, 583
TaaI ACNGT 3 cut(s) 170, 744, 1285
TaiI ACGT 5 cut(s) 300, 314, 770, 977, 1178
TaqI TCGA 1 cut(s) 419
TasI AATT 4 cut(s) 719, 829, 910, 1456
TatI WGTACW 3 cut(s) 480, 845, 881
TauI GCSGC 7 cut(s) 79, 471, 655, 905, 908, 1189, 1269
Tru1I TTAA 2 cut(s) 363, 773
Tru9I TTAA 2 cut(s) 363, 773
TscAI CASTG 2 cut(s) 1226, 1429
TseFI GTSAC 1 cut(s) 545
TseI GCWGC 9 cut(s) 262, 595, 834, 1115, 1130, 1133, 1274, 1277, 1289
Tsp45I GTSAC 1 cut(s) 545
TspDTI ATGAA 3 cut(s) 473, 514, 1419
TspGWI ACGGA 1 cut(s) 290
TspRI CASTG 2 cut(s) 1226, 1429
VneI GTGCAC 2 cut(s) 320, 1521
XapI RAATTY 1 cut(s) 719
XmaJI CCTAGG 1 cut(s) 583
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 9 cut(s) 35, 474, 510, 584, 843, 849, 861, 879, 1140
ZraI GACGTC 1 cut(s) 312
ZrmI AGTACT 2 cut(s) 847, 883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.