Rh6BG418600

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0013791
Physical Location & Seq
Reverse (-)
64294045 .. 64297333
3289 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG418600.1

Sequence Viewer

Length: 1566 bp
ATGGGCGACCTTGACAATTCTTCATCACTAGTTGGTTCTACCGCTTCAGGAGAAGCTACTTTTTCGGAGCCTCCTGCCAAGAAGAAGCGAAATCTTCCCGGAATGCCAGATCCTGAAGCGGAGGTGATCGCTCTGTCGCCGAAAACTCTGATGGCGACGAACCGTTTCGTGTGCGAGATCTGCAACAAAGGGTTCCAGCGCGACCAGAACCTCCAGCTCCACCGGCGAGGCCACAACCTGCCGTGGAAGCTGAGGCAGCGAACCACGACGGAGGTTCGGAAGCGGGTTTACGTCTGCCCAGAGACGTCGTGCGTGCACCACAACCCGACCCGAGCGCTGGGCGATCTCACCGGGATTAAGAAGCACTTTTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAGCGGTGCTCCAAGAAGTACGCGGTGCAATCTGATTGGAAGGCGCACATGAAGACCTGCGGCACTAGAGAGTACAAATGTGATTGTGGAACTTTGTTCTCTAGGAGGGATAGCTTCATAACGCATAGGGCTTTCTGTGACGCCTTGGCCGAGGAGAGTGCTAAGGCTCAAACCCTAGGAAGCTCGCAGCAGCTCGGAAATTCAAATCCGAACCCGAATCCGAATGCTGGAAAGGCGGTTGTGGTGGCATCGCCGCCTCCACCGCCTCTCACACCTTCCAATAATGTGGTGTCTCCAGCTCTATCCATTCAAAGCTCAGAATTCCCAGAAAACCCAGTAGGACTGTCGCCGCCACCTCCAGCAACCACGTGCTTAACGAGTACCACGACGGCGATTAGCACCGCCGCCACCACCACCTCAACTGGAAATTGCAGCAACACTAGTACTAGTGTATTTGCTAGCATATTTGCTCCTAGTACTGCCTCACAAACATCGGCAGCTGCTAATTCCTCATACTCCAATATAGTCTCCAGTTCTGCAATCCCATCAGCCTCCGCCATGGAACCAACGTCTCTCTCACTCTCCACCTCTCTATACCTATCCAACAATGGCTCCACCCTCTTCCCAACTGCTGATCAGCAAGACCATCGCCAGTATGTAGCTTCCCCGCAGGCTCCAGCCATGTCTGCCACGGCATTGCTCCAAAAAGCAGCCCAAATGGGTGCAGCTGCGACTAGTGGGTCTTTTCTTCGTGGCTTTGGCTTGGCCACGTCCTCATCGCCGCCTCAGGCGCAAGATAGCACCACCTCTTTGCAGTGGAGCAACAACAGCCACAGCCAGCAGCACAAGAGAGATGGTAGTGGCGGTGCTGCTGCCACAGTAGCAGCTGGGCTTGGAGCAAGTTCTGCCTTATTGACTGATCTCATGATGGGCCCACCTGTGCCGTTTGGGGGTCATCATCAGCCCATGACCCGCGACCTTCTTGGGCTGGGCATAGGTGCTAATGGCGGGGGTGGCAGTGCTTCATCCGCCGGACTATCTGCTTTGCTCAATTCGTTCGGCGGTGGTGGAGGTTATACTACATATGCAAGGGGAGAAGAGTCATCATGGGAAGGTGCACAGGAGAGGAAACCTAATACTGCTACTGGCCCAGCCTTGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2 zf-C2H2_jaz zf-met

Protein Analysis

521

Amino Acids

54.34

Weight (kDa)

9.05

Isoelectric Point (pI)

51.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 93 - 127 1.5e-21 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 131 - 155 3.1e-15 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 158 - 196 1.3e-24 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013791)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g40030
malus_domestica MD08G1033100.v1.1 MD15G1029700.v1.1
prunus_persica Prupe.1G381800_v2.0.a1
pyrus_communis pycom08g02620 pycom12g10450 pycom15g02610
rosa_chinensis RchiOBHm_Chr6g0300721
rosa_laevigata RLG00000011308
rosa_multiflora Rmu_co8477681.1_g000001
rosa_roxburghii Rroxscaffold_7G00167480
rosa_rugosa Rorug06G0298700
rosa_samantha Rh6AG411300 Rh6BG418600 Rh6CG426000 Rh6DG411500
rosa_wichuraiana Rw6G036000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1141
AatII GACGTC 1 cut(s) 308
Acc36I ACCTGC 2 cut(s) 246, 467
AccBSI CCGCTC 1 cut(s) 406
AccII CGCG 3 cut(s) 201, 425, 1377
AclWI GGATC 1 cut(s) 104
AcoI YGGCCR 2 cut(s) 549, 1167
AcsI RAATTY 2 cut(s) 601, 722
AcuI CTGAAG 2 cut(s) 30, 135
AcvI CACGTG 1 cut(s) 771
AcyI GRCGYC 2 cut(s) 305, 543
AfaI GTAC 5 cut(s) 422, 476, 784, 847, 880
AfeI AGCGCT 1 cut(s) 336
AfiI CCNNNNNNNGG 3 cut(s) 337, 629, 1352
AgsI TTSAA 2 cut(s) 606, 713
AhlI ACTAGT 4 cut(s) 28, 842, 848, 1136
AjiI CACGTC 1 cut(s) 1173
Alw21I GWGCWC 3 cut(s) 318, 413, 1522
Alw26I GTCTC 4 cut(s) 296, 699, 934, 978
Alw44I GTGCAC 2 cut(s) 314, 1518
AlwI GGATC 1 cut(s) 104
AlwNI CAGNNNCTG 1 cut(s) 113
Ama87I CYCGRG 1 cut(s) 330
Aor51HI AGCGCT 1 cut(s) 336
AoxI GGCC 5 cut(s) 229, 549, 1167, 1333, 1549
ApaI GGGCCC 1 cut(s) 1337
ApaLI GTGCAC 2 cut(s) 314, 1518
ApoI RAATTY 2 cut(s) 601, 722
Asp700I GAANNNNTTC 1 cut(s) 164
AspA2I CCTAGG 1 cut(s) 577
AspLEI GCGC 4 cut(s) 201, 337, 448, 1195
AspS9I GGNCC 3 cut(s) 1333, 1334, 1550
AsuC2I CCSGG 2 cut(s) 99, 352
AsuHPI GGTGA 2 cut(s) 136, 340
AsuNHI GCTAGC 1 cut(s) 860
AvaI CYCGRG 1 cut(s) 330
AvrII CCTAGG 1 cut(s) 577
AxyI CCTNAGG 1 cut(s) 1188
BaeGI GKGCMC 3 cut(s) 318, 1337, 1522
BalI TGGCCA 1 cut(s) 1169
BanII GRGCYC 1 cut(s) 1337
BarI GAAGNNNNNNTAC 2 cut(s) 272, 304
BbrPI CACGTG 1 cut(s) 771
BbsI GAAGAC 1 cut(s) 461
Bbv12I GWGCWC 3 cut(s) 318, 413, 1522
BbvCI CCTCAGC 1 cut(s) 251
BccI CCATC 5 cut(s) 145, 955, 1056, 1250, 1324
BceAI ACGGC 5 cut(s) 226, 397, 807, 1110, 1330
BcgI CGANNNNNNTGC 4 cut(s) 542, 576, 1031, 1065
BclI TGATCA 1 cut(s) 1036
BcnI CCSGG 2 cut(s) 99, 352
BcoDI GTCTC 4 cut(s) 296, 699, 934, 978
BcuI ACTAGT 4 cut(s) 28, 842, 848, 1136
BfaI CTAG 9 cut(s) 29, 468, 504, 578, 843, 849, 861, 876, 1137
BfoI RGCGCY 1 cut(s) 338
BfuAI ACCTGC 2 cut(s) 246, 467
BglII AGATCT 1 cut(s) 177
BlnI CCTAGG 1 cut(s) 577
BmcAI AGTACT 2 cut(s) 847, 880
Bme1390I CCNGG 2 cut(s) 99, 352
BmeT110I CYCGRG 1 cut(s) 330
BmgBI CACGTC 1 cut(s) 1173
BmgT120I GGNCC 3 cut(s) 1333, 1334, 1550
BmiI GGNNCC 6 cut(s) 69, 194, 966, 1015, 1077, 1335
BmrFI CCNGG 2 cut(s) 99, 352
BmrI ACTGGG 1 cut(s) 731
BmsI GCATC 1 cut(s) 659
BmtI GCTAGC 1 cut(s) 864
BmuI ACTGGG 1 cut(s) 731
BpiI GAAGAC 1 cut(s) 461
BplI GAGNNNNNCTC 2 cut(s) 395, 427
BpmI CTGGAG 5 cut(s) 197, 681, 744, 916, 1062
Bpu10I CCTNAGC 2 cut(s) 251, 564
BpuMI CCSGG 2 cut(s) 99, 352
BsaAI YACGTR 1 cut(s) 771
BsaHI GRCGYC 2 cut(s) 305, 543
BsaJI CCNNGG 6 cut(s) 242, 546, 552, 577, 960, 1092
BsaXI ACNNNNNCTCC 2 cut(s) 998, 1028
Bsc4I CCNNNNNNNGG 3 cut(s) 337, 629, 1352
Bse118I RCCGGY 1 cut(s) 222
Bse1I ACTGG 5 cut(s) 737, 829, 933, 1054, 1552
Bse21I CCTNAGG 1 cut(s) 1188
Bse3DI GCAATG 1 cut(s) 1097
BseDI CCNNGG 6 cut(s) 242, 546, 552, 577, 960, 1092
BseGI GGATG 1 cut(s) 1427
BseLI CCNNNNNNNGG 3 cut(s) 337, 629, 1352
BseMI GCAATG 1 cut(s) 1097
BseMII CTCAG 3 cut(s) 242, 732, 1202
BseNI ACTGG 5 cut(s) 737, 829, 933, 1054, 1552
BseRI GAGGAG 1 cut(s) 569
BseSI GKGCMC 3 cut(s) 318, 1337, 1522
BseYI CCCAGC 4 cut(s) 337, 1289, 1390, 1552
BsgI GTGCAG 1 cut(s) 1146
Bsh1236I CGCG 3 cut(s) 201, 425, 1377
BshFI GGCC 5 cut(s) 231, 551, 1169, 1335, 1551
BsiHKAI GWGCWC 3 cut(s) 318, 413, 1522
BsiHKCI CYCGRG 1 cut(s) 330
BsiSI CCGG 4 cut(s) 99, 223, 351, 1434
BslI CCNNNNNNNGG 3 cut(s) 337, 629, 1352
BsmAI GTCTC 4 cut(s) 296, 699, 934, 978
BsmBI CGTCTC 2 cut(s) 296, 978
BsmI GAATGC 2 cut(s) 108, 631
BsnI GGCC 5 cut(s) 231, 551, 1169, 1335, 1551
BsoBI CYCGRG 1 cut(s) 330
Bsp120I GGGCCC 1 cut(s) 1333
Bsp1286I GDGCHC 4 cut(s) 318, 413, 1337, 1522
Bsp143I GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
Bsp19I CCATGG 1 cut(s) 960
BspANI GGCC 5 cut(s) 231, 551, 1169, 1335, 1551
BspCNI CTCAG 3 cut(s) 243, 731, 1201
BspFNI CGCG 3 cut(s) 201, 425, 1377
BspHI TCATGA 1 cut(s) 1326
BspLI GGNNCC 6 cut(s) 69, 194, 966, 1015, 1077, 1335
BspMI ACCTGC 2 cut(s) 246, 467
BspOI GCTAGC 1 cut(s) 864
BspPI GGATC 1 cut(s) 104
BsrBI CCGCTC 1 cut(s) 406
BsrDI GCAATG 1 cut(s) 1097
BsrFI RCCGGY 1 cut(s) 222
BsrI ACTGG 5 cut(s) 737, 829, 933, 1054, 1552
BssAI RCCGGY 1 cut(s) 222
BssECI CCNNGG 6 cut(s) 242, 546, 552, 577, 960, 1092
BssMI GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
BssNI GRCGYC 2 cut(s) 305, 543
BssT1I CCWWGG 3 cut(s) 546, 577, 960
Bst4CI ACNGT 3 cut(s) 164, 747, 1282
Bst6I CTCTTC 2 cut(s) 1028, 1494
BstACI GRCGYC 2 cut(s) 305, 543
BstAPI GCANNNNNTGC 1 cut(s) 1307
BstBAI YACGTR 1 cut(s) 771
BstC8I GCNNGC 6 cut(s) 314, 404, 587, 862, 1074, 1241
BstDEI CTNAG 4 cut(s) 251, 564, 718, 1188
BstDSI CCRYGG 3 cut(s) 242, 960, 1092
BstF5I GGATG 1 cut(s) 1427
BstFNI CGCG 3 cut(s) 201, 425, 1377
BstH2I RGCGCY 1 cut(s) 338
BstHHI GCGC 4 cut(s) 201, 337, 448, 1195
BstKTI GATC 6 cut(s) 112, 129, 180, 346, 1039, 1324
BstMAI GTCTC 4 cut(s) 296, 699, 934, 978
BstMBI GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
BstSCI CCNGG 2 cut(s) 97, 350
BstSLI GKGCMC 3 cut(s) 318, 1337, 1522
BstUI CGCG 3 cut(s) 201, 425, 1377
BstV2I GAAGAC 1 cut(s) 461
BstX2I RGATCY 2 cut(s) 109, 177
BstXI CCANNNNNNTGG 1 cut(s) 688
BstYI RGATCY 2 cut(s) 109, 177
Bsu36I CCTNAGG 1 cut(s) 1188
BsuRI GGCC 5 cut(s) 231, 551, 1169, 1335, 1551
BtgI CCRYGG 3 cut(s) 242, 960, 1092
BtgZI GCGATG 3 cut(s) 636, 1034, 1164
BtrI CACGTC 1 cut(s) 1173
BtsCI GGATG 1 cut(s) 1427
BtsI GCAGTG 2 cut(s) 1223, 1426
BtsIMutI CAGTG 2 cut(s) 1223, 1426
BveI ACCTGC 2 cut(s) 246, 467
Cac8I GCNNGC 6 cut(s) 314, 404, 587, 862, 1074, 1241
CaiI CAGNNNCTG 1 cut(s) 113
CciI TCATGA 1 cut(s) 1326
CfoI GCGC 4 cut(s) 201, 337, 448, 1195
Cfr10I RCCGGY 1 cut(s) 222
Cfr13I GGNCC 3 cut(s) 1333, 1334, 1550
CseI GACGC 1 cut(s) 551
Csp6I GTAC 5 cut(s) 421, 475, 783, 846, 879
CviAII CATG 6 cut(s) 451, 961, 1084, 1327, 1369, 1509
CviQI GTAC 5 cut(s) 421, 475, 783, 846, 879
DdeI CTNAG 4 cut(s) 251, 564, 718, 1188
DpnI GATC 6 cut(s) 111, 128, 179, 345, 1038, 1323
DpnII GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
DrdI GACNNNNNNGTC 1 cut(s) 1141
DseDI GACNNNNNNGTC 1 cut(s) 1141
EaeI YGGCCR 2 cut(s) 549, 1167
Eam1104I CTCTTC 2 cut(s) 1028, 1494
EarI CTCTTC 2 cut(s) 1028, 1494
EciI GGCGGA 2 cut(s) 946, 1420
Eco130I CCWWGG 3 cut(s) 546, 577, 960
Eco24I GRGCYC 1 cut(s) 1337
Eco47III AGCGCT 1 cut(s) 336
Eco57I CTGAAG 2 cut(s) 30, 135
Eco72I CACGTG 1 cut(s) 771
Eco81I CCTNAGG 1 cut(s) 1188
Eco88I CYCGRG 1 cut(s) 330
EcoRI GAATTC 1 cut(s) 722
EcoT14I CCWWGG 3 cut(s) 546, 577, 960
EcoT38I GRGCYC 1 cut(s) 1337
ErhI CCWWGG 3 cut(s) 546, 577, 960
Esp3I CGTCTC 2 cut(s) 296, 978
FaeI CATG 6 cut(s) 454, 964, 1087, 1330, 1372, 1512
FalI AAGNNNNNCTT 2 cut(s) 350, 382
FatI CATG 6 cut(s) 450, 960, 1083, 1326, 1368, 1508
FauI CCCGC 4 cut(s) 276, 1077, 1382, 1403
FauNDI CATATG 1 cut(s) 1486
FbaI TGATCA 1 cut(s) 1036
FokI GGATG 1 cut(s) 1414
FriOI GRGCYC 1 cut(s) 1337
FspBI CTAG 9 cut(s) 29, 468, 504, 578, 843, 849, 861, 876, 1137
GlaI GCGC 4 cut(s) 200, 336, 447, 1194
GsaI CCCAGC 4 cut(s) 341, 1293, 1394, 1556
GsuI CTGGAG 5 cut(s) 197, 681, 744, 916, 1062
HaeII RGCGCY 1 cut(s) 338
HaeIII GGCC 5 cut(s) 231, 551, 1169, 1335, 1551
HapII CCGG 4 cut(s) 99, 223, 351, 1434
HgaI GACGC 1 cut(s) 551
HhaI GCGC 4 cut(s) 201, 337, 448, 1195
Hin1I GRCGYC 2 cut(s) 305, 543
Hin1II CATG 6 cut(s) 454, 964, 1087, 1330, 1372, 1512
Hin6I GCGC 4 cut(s) 199, 335, 446, 1193
HinP1I GCGC 4 cut(s) 199, 335, 446, 1193
HinfI GANTC 2 cut(s) 619, 1502
HpaII CCGG 4 cut(s) 99, 223, 351, 1434
HphI GGTGA 2 cut(s) 136, 340
Hpy166II GTNNAC 3 cut(s) 289, 316, 1520
Hpy188I TCNGA 8 cut(s) 67, 150, 279, 436, 599, 612, 624, 721
Hpy188III TCNNGA 3 cut(s) 48, 113, 1327
Hpy8I GTNNAC 3 cut(s) 289, 316, 1520
Hpy99I CGWCG 4 cut(s) 160, 271, 310, 793
HpyAV CCTTC 4 cut(s) 436, 687, 1391, 1508
HpyCH4III ACNGT 3 cut(s) 164, 747, 1282
HpyCH4IV ACGT 5 cut(s) 291, 305, 770, 971, 1172
HpyF3I CTNAG 4 cut(s) 251, 564, 718, 1188
HpySE526I ACGT 5 cut(s) 291, 305, 770, 971, 1172
Hsp92I GRCGYC 2 cut(s) 305, 543
Hsp92II CATG 6 cut(s) 454, 964, 1087, 1330, 1372, 1512
HspAI GCGC 4 cut(s) 199, 335, 446, 1193
Ksp22I TGATCA 1 cut(s) 1036
Kzo9I GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
LmnI GCTCC 9 cut(s) 67, 222, 416, 877, 1019, 1081, 1107, 1221, 1298
LweI GCATC 1 cut(s) 659
MaeI CTAG 9 cut(s) 29, 468, 504, 578, 843, 849, 861, 876, 1137
MaeII ACGT 5 cut(s) 291, 305, 770, 971, 1172
MaeIII GTNAC 1 cut(s) 539
MalI GATC 6 cut(s) 111, 128, 179, 345, 1038, 1323
MbiI CCGCTC 1 cut(s) 406
MboI GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
MboII GAAGA 8 cut(s) 12, 86, 94, 400, 466, 1015, 1142, 1511
MflI RGATCY 2 cut(s) 109, 177
MhlI GDGCHC 4 cut(s) 318, 413, 1337, 1522
MlsI TGGCCA 1 cut(s) 1169
MluCI AATT 6 cut(s) 16, 601, 722, 829, 907, 1453
MluNI TGGCCA 1 cut(s) 1169
MlyI GAGTC 1 cut(s) 1511
MmeI TCCRAC 1 cut(s) 1029
Mox20I TGGCCA 1 cut(s) 1169
MroXI GAANNNNTTC 1 cut(s) 164
MscI TGGCCA 1 cut(s) 1169
MseI TTAA 2 cut(s) 357, 776
Msp20I TGGCCA 1 cut(s) 1169
MspA1I CMGCKG 3 cut(s) 902, 1130, 1289
MspI CCGG 4 cut(s) 99, 223, 351, 1434
MspR9I CCNGG 2 cut(s) 99, 352
Mva1269I GAATGC 2 cut(s) 108, 631
MvnI CGCG 3 cut(s) 201, 425, 1377
NciI CCSGG 2 cut(s) 99, 352
NcoI CCATGG 1 cut(s) 960
NdeI CATATG 1 cut(s) 1486
NdeII GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
NheI GCTAGC 1 cut(s) 860
NlaIII CATG 6 cut(s) 454, 964, 1087, 1330, 1372, 1512
NlaIV GGNNCC 6 cut(s) 69, 194, 966, 1015, 1077, 1335
NmeAIII GCCGAG 1 cut(s) 577
NmuCI GTSAC 1 cut(s) 539
PagI TCATGA 1 cut(s) 1326
PcsI WCGNNNNNNNCGW 3 cut(s) 549, 776, 785
PctI GAATGC 2 cut(s) 108, 631
PdmI GAANNNNTTC 1 cut(s) 164
PfeI GAWTC 1 cut(s) 619
PfoI TCCNGGA 1 cut(s) 97
PleI GAGTC 1 cut(s) 1510
PmaCI CACGTG 1 cut(s) 771
PmlI CACGTG 1 cut(s) 771
PpsI GAGTC 1 cut(s) 1510
Ppu21I YACGTR 1 cut(s) 771
PspCI CACGTG 1 cut(s) 771
PspFI CCCAGC 4 cut(s) 337, 1289, 1390, 1552
PspN4I GGNNCC 6 cut(s) 69, 194, 966, 1015, 1077, 1335
PspOMI GGGCCC 1 cut(s) 1333
PspPI GGNCC 3 cut(s) 1333, 1334, 1550
PstNI CAGNNNCTG 1 cut(s) 113
PsuI RGATCY 2 cut(s) 109, 177
PvuII CAGCTG 3 cut(s) 902, 1130, 1289
RsaI GTAC 5 cut(s) 422, 476, 784, 847, 880
RsaNI GTAC 5 cut(s) 421, 475, 783, 846, 879
SaqAI TTAA 2 cut(s) 357, 776
Sau3AI GATC 6 cut(s) 109, 126, 177, 343, 1036, 1321
Sau96I GGNCC 3 cut(s) 1333, 1334, 1550
ScaI AGTACT 2 cut(s) 847, 880
SchI GAGTC 1 cut(s) 1511
ScrFI CCNGG 2 cut(s) 99, 352
SduI GDGCHC 4 cut(s) 318, 413, 1337, 1522
SfaNI GCATC 1 cut(s) 659
SgrAI CRCCGGYG 1 cut(s) 222
SpeI ACTAGT 4 cut(s) 28, 842, 848, 1136
Sse9I AATT 6 cut(s) 16, 601, 722, 829, 907, 1453
SspMI CTAG 9 cut(s) 29, 468, 504, 578, 843, 849, 861, 876, 1137
StyD4I CCNGG 2 cut(s) 97, 350
StyI CCWWGG 3 cut(s) 546, 577, 960
TaaI ACNGT 3 cut(s) 164, 747, 1282
TaiI ACGT 5 cut(s) 294, 308, 773, 974, 1175
TasI AATT 6 cut(s) 16, 601, 722, 829, 907, 1453
TatI WGTACW 3 cut(s) 474, 845, 878
TauI GCSGC 5 cut(s) 465, 658, 754, 809, 1186
TfiI GAWTC 1 cut(s) 619
Tru1I TTAA 2 cut(s) 357, 776
Tru9I TTAA 2 cut(s) 357, 776
TscAI CASTG 2 cut(s) 1223, 1426
TseFI GTSAC 1 cut(s) 539
Tsp45I GTSAC 1 cut(s) 539
TspDTI ATGAA 4 cut(s) 12, 467, 508, 1416
TspGWI ACGGA 1 cut(s) 284
TspRI CASTG 2 cut(s) 1223, 1426
VneI GTGCAC 2 cut(s) 314, 1518
XapI RAATTY 2 cut(s) 601, 722
XmaJI CCTAGG 1 cut(s) 577
XmnI GAANNNNTTC 1 cut(s) 164
XspI CTAG 9 cut(s) 29, 468, 504, 578, 843, 849, 861, 876, 1137
ZraI GACGTC 1 cut(s) 306
ZrmI AGTACT 2 cut(s) 847, 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.