MD15G1152500.v1.1

Belongs to the peptidase C19 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
11294594 .. 11301256
6663 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1152500.v1.1.491

Sequence Viewer

Length: 3018 bp
ATGGCCGACGCTTTGGTGCAAACGGCGGAGCTCCAAATCCAATCGGAGGGCTTTGCGGATTTAATGCCCGAATCGGAAACCGGGTCGAATCCGCTTCAGAGGCGTATCGAGTTCCACCGAGCGAGGAAGCCCTTCAATGGCCTTAACACTGGTGGCGGTGACTTTAGGCTCGAGACCTTGAACCCCGGAAGCAGCAACAGCGGCGGTAGCAGCTCTAATCAGGGTCAGTCGAGTTTGACGGCTAAGAAAACGGATCGGTCCGAGTTTTTGGAGAACGGGTTGGATCCGGAGCTCAGCTTTGGCATCACCTTCCGGAGAATTGGTGCCGGTTTGAGGAATATGGGGAACACTTGTTATCTCAATTCAGTGTTGCAGTGTCTGACATATACTGAGCCTTTAGCTGCATACTTGCAAAGTGGAAAGCATCGAAATTCATGCCATATTGCTGGGTTTTGTGCTTTATGTGCCATCCAGAAGCACGTTAGTCTTGCTCTACAATCAACCGGGAGAATTTTGGTTCCAAAGGATCTAGTCATTAACTTACGATGCATATCTCGAACTTTCACTAAGTCTAGACAGGAGGATGCACATGAATACATGGTAAACTTGCTGGAATCCATGCATAAATGCTGTTTACCTTCTGGTGTGCCCAGCGAATCCCCAAGTGCCTACGAGAAGAGCTTGGTACACAAGATTTTTGGTGGTCGCCTTCGAAGCCAGGTCAAATGTTTGCAGTGCTCCTATTGCTCCAACAAGTTTGACCCCTTCTTAGATTTAAGTCTTGAAATATTCAACGCAGATTCCGTGCAAAAAGCACTTGCAAAATTTACCGCCTCAGAACAGTTAGATGGAGGGGAAAGGCAATATCAGTGCCAACGATGCAATCAGAAAGTTCGGGCTCTCAAACAGATGACTGTTCAAAAGCCTCCTTATGTACTTACCATCCATTTGAAGCGATTTCGTGCACATGATCCTGGACGAAAAATTGATAGACATGTAAAATTTGCCCCTACATTGGATTTGAAGCCATTTGTTAGTGGTTCCTACGAAGGGGATTTGAAATATACTCTCTATGGGGTTCTTGTTCATTGTGGGGCTACCACCTATTCTGGCCATTATTATTGCTATGTTCGCACATCAAGTGGCATGTGGTACTCTCTTGATGACAACCAGGTCTACCAAGTTAGTGAGAGGATTGTTTTAGAACAGAAGGCTTACATGTTGTTTTATGTCCGCGATAGAAGAAATATAATACCAAGGAAGCCTGTTGAAGTTGCTCGAAGGGAGAATTTCAATGCAAATGGAGCTGGATTAAAAACTCGTTGCACTAACAACCAAGGCTTCAAAGGACCGGTTCAGAATGTTTCTGTTGAGGGCAGATCCAGTGGTCCATCCTCATCTATCGTTATGACACAAAAATCAACTATAGTTCCACCTATGGTGCCCCTTTTGAAGGAAGCATCAACTAATTGCCAGACAGTGGCAGGAAATATGGTGCCTATGAAGGAACCTGTTTGGGAGTCTTCTCCATCTTTATCAAAAGACCCGCTGAAAGGGTTTTCCATTCCAAGCCGCAGCAGTGGTGGTGCTTCTGAATCTAAAAATGCGGCAGAAAATATGGTGTGTATGAAGGAACCTGTTTCAGATTCTTCTTCATCATTACCAAAGGATTCATTGAAAGGGATTTCCATTCCGATTCCCACATTGGGAAAGGACATGCTACGATCACCTCCAACTAGAAATGGTGGCACTTCGGATCCTGAAAATGCCACAGCTGCAAAAGCTGATGGCAATAAAACTGACCTTAATGGGAGAGGAAGGTCAGTTGAAAACAGTGGTGTTTCCAGTGTCATAGCACCCAATGCCAAGGACCCTGAAAGCCTTGAGGCTTCTAAACCCATACTAGATGAGACCCCTCATAATAATAATCTTGTATCCTCTAAGGGAGACTTGAGTACATCATCCAGAGTTCCTGGCGGTATGAAAAAGGAGGGAATTCACACTGTCAAATCATCAGATCAACCAAGCTCTAAAATTAGTCAGGTTGGAAGTTTTACCAATGGAAGTGCTGCTTGTAATGTTTTGGGTGAGAAGACTGGTGATTCAGGCCAAAAAGTAGTAATTGATGAGTCAGCAAAATTGTCTGGCTCCTCATTAATTGTGACATATGGATCGTTGCTTGTGAAATCTTCTGCTTGCAAACGCCATAGAAAATTGAAAAAGAAGCAGCTAAAGTCTAAGGTTGCTTGCATGCAGTTACGACCTGGCTTACTTTCCCGGGCGGTCTTAAGCGTACAGAAGAAGAAAAAACACAAAAGGAGTAAGCACCCATCTTCAGATACCAGTAGCCTTCTTAAGAAACATGTTATGGACAATTCTTGCTTATCTGATATGGGGCCATCTACATCTGAGCAAACCCGGTCAATTCCCTTGGTTTCTACTCCTTCTAAGCAAAAGTCTAAGAGGAAGGGGACCAAATCTGGCTTAAAAAAGGATGCAGATGGAACTGATAAAAAGCTGGAAATGAAATCTCATGGTCATTCTTTAATGGCTGCCAATAAGGGTGAGTTTAGAGAAAGTGTTGGTCAGAATGGTACAGTGCTTGCAAGTGATAAAAGATTACAAATTGGTAATGTCTCTAGCTCTTTCTCAAAAGAAAATCTGCGGGAGACCGGGGAAAATGATACCCCACACAATTGTAAAAGGGATAGAATGCAAAATGGAGGGATTGGTGTGCTGACCCGAGGTCTTGACGAGACAATGGTTGCACGTTGGGACGGAATAGAATTGCCTCCTCCTCGTATTGTAGAATCAAGCCGTGCAAAGAGTGTCAGCATTGGTTATATACCTGACGAATGGGATGAAGAATATGATCGCGGAAAGAGAAAGAGGGTAAGGCAACCCAAAGAAACATTTGGCGGACCAAATCCATTCCAAAAGATTGCAACCCAGAGATCGCAGATGAAAAAAACAAAGCCAGACAGGTATGGTTCTGGAAATCACCCCCTCCGGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1006

Amino Acids

110.06

Weight (kDa)

9.59

Isoelectric Point (pI)

48.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UCH PF00443 109 - 410 5.4e-61 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 109 - 392 3.1e-18 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1172
AccB1I GGYRCC 3 cut(s) 323, 1441, 1495
AccB7I CCANNNNNTGG 1 cut(s) 1480
AccI GTMKAC 1 cut(s) 1176
AccII CGCG 2 cut(s) 1236, 2877
AccIII TCCGGA 3 cut(s) 286, 312, 3009
AclWI GGATC 9 cut(s) 261, 278, 291, 534, 965, 1374, 1751, 1764, 2179
AcoI YGGCCR 2 cut(s) 3, 1111
AcsI RAATTY 6 cut(s) 430, 510, 824, 1001, 1288, 1995
AcuI CTGAAG 2 cut(s) 80, 2319
AfaI GTAC 6 cut(s) 687, 936, 1154, 1957, 2295, 2596
AfiI CCNNNNNNNGG 9 cut(s) 46, 137, 333, 1015, 1050, 1453, 1480, 1553, 1706
AflII CTTAAG 2 cut(s) 2287, 2354
AflIII ACRYGT 3 cut(s) 994, 1218, 2362
AgeI ACCGGT 1 cut(s) 1351
AhdI GACNNNNNGTC 1 cut(s) 2745
AjnI CCWGG 5 cut(s) 717, 973, 1170, 1972, 2263
Alw21I GWGCWC 4 cut(s) 33, 294, 740, 967
Alw26I GTCTC 6 cut(s) 167, 1904, 1941, 2641, 2663, 2750
Alw44I GTGCAC 1 cut(s) 963
AlwI GGATC 9 cut(s) 261, 278, 291, 534, 965, 1374, 1751, 1764, 2179
AlwNI CAGNNNCTG 1 cut(s) 379
Ama87I CYCGRG 3 cut(s) 170, 2277, 2742
Aor13HI TCCGGA 3 cut(s) 286, 312, 3009
AoxI GGCC 5 cut(s) 3, 139, 1111, 2107, 2396
ApaLI GTGCAC 1 cut(s) 963
ApeKI GCWGC 8 cut(s) 192, 210, 401, 1575, 1775, 2069, 2227, 2552
ApoI RAATTY 6 cut(s) 430, 510, 824, 1001, 1288, 1995
AseI ATTAAT 1 cut(s) 2156
AsiGI ACCGGT 1 cut(s) 1351
Asp700I GAANNNNTTC 1 cut(s) 131
AspS9I GGNCC 7 cut(s) 258, 1349, 1388, 1870, 2396, 2472, 2921
AsuC2I CCSGG 7 cut(s) 82, 186, 505, 2278, 2279, 2419, 2674
AsuHPI GGTGA 7 cut(s) 170, 298, 1719, 2099, 2111, 2576, 2993
AsuII TTCGAA 1 cut(s) 712
AvaI CYCGRG 3 cut(s) 170, 2277, 2742
AvaII GGWCC 6 cut(s) 258, 1349, 1388, 1870, 2472, 2921
BaeGI GKGCMC 3 cut(s) 651, 967, 1446
BalI TGGCCA 1 cut(s) 1113
BamHI GGATCC 2 cut(s) 283, 1756
BanI GGYRCC 3 cut(s) 323, 1441, 1495
BanII GRGCYC 3 cut(s) 33, 294, 901
BbsI GAAGAC 2 cut(s) 1515, 2099
Bbv12I GWGCWC 4 cut(s) 33, 294, 740, 967
BbvI GCAGC 8 cut(s) 204, 222, 388, 1587, 1762, 2056, 2239, 2539
BccI CCATC 9 cut(s) 476, 842, 950, 1399, 1537, 1781, 2338, 2407, 2495
BceAI ACGGC 3 cut(s) 39, 255, 2802
BcgI CGANNNNNNTGC 2 cut(s) 417, 451
BciT130I CCWGG 5 cut(s) 719, 975, 1172, 1974, 2265
BciVI GTATCC 1 cut(s) 1945
BcnI CCSGG 7 cut(s) 82, 186, 505, 2278, 2279, 2419, 2674
BcoDI GTCTC 6 cut(s) 167, 1904, 1941, 2641, 2663, 2750
BfaI CTAG 5 cut(s) 530, 573, 1737, 1904, 2640
BfmI CTRYAG 1 cut(s) 1425
BfrI CTTAAG 2 cut(s) 2287, 2354
BfuI GTATCC 1 cut(s) 1945
BlpI GCTNAGC 1 cut(s) 293
Bme18I GGWCC 6 cut(s) 258, 1349, 1388, 1870, 2472, 2921
BmeRI GACNNNNNGTC 1 cut(s) 2745
BmeT110I CYCGRG 3 cut(s) 170, 2277, 2742
BmgT120I GGNCC 7 cut(s) 258, 1349, 1388, 1870, 2396, 2472, 2921
BmsI GCATC 7 cut(s) 312, 433, 536, 574, 869, 1469, 2485
BpiI GAAGAC 2 cut(s) 1515, 2099
Bpu1102I GCTNAGC 1 cut(s) 293
Bpu14I TTCGAA 1 cut(s) 712
BpuEI CTTGAG 2 cut(s) 1904, 1972
BpuMI CCSGG 7 cut(s) 82, 186, 505, 2278, 2279, 2419, 2674
BsaBI GATNNNNATC 1 cut(s) 550
BsaI GGTCTC 3 cut(s) 167, 1904, 2663
BsaJI CCNNGG 8 cut(s) 184, 1256, 1336, 1866, 2277, 2430, 2673, 2743
BsaWI WCCGGW 4 cut(s) 286, 312, 1351, 3009
BsaXI ACNNNNNCTCC 4 cut(s) 263, 293, 307, 337
Bsc4I CCNNNNNNNGG 9 cut(s) 46, 137, 333, 1015, 1050, 1453, 1480, 1553, 1706
Bse118I RCCGGY 2 cut(s) 326, 1351
Bse1I ACTGG 5 cut(s) 154, 1383, 1845, 2101, 2343
Bse8I GATNNNNATC 1 cut(s) 550
BseAI TCCGGA 3 cut(s) 286, 312, 3009
BseBI CCWGG 5 cut(s) 719, 975, 1172, 1974, 2265
BseDI CCNNGG 8 cut(s) 184, 1256, 1336, 1866, 2277, 2430, 2673, 2743
BseGI GGATG 7 cut(s) 468, 589, 942, 1391, 1961, 2500, 2866
BseJI GATNNNNATC 1 cut(s) 550
BseLI CCNNNNNNNGG 9 cut(s) 46, 137, 333, 1015, 1050, 1453, 1480, 1553, 1706
BseMII CTCAG 4 cut(s) 307, 381, 849, 2400
BseNI ACTGG 5 cut(s) 154, 1383, 1845, 2101, 2343
BseRI GAGGAG 3 cut(s) 2140, 2784, 2787
BseSI GKGCMC 3 cut(s) 651, 967, 1446
BseXI GCAGC 8 cut(s) 204, 222, 388, 1587, 1762, 2056, 2239, 2539
BseYI CCCAGC 2 cut(s) 446, 650
Bsh1236I CGCG 2 cut(s) 1236, 2877
BshFI GGCC 5 cut(s) 5, 141, 1113, 2109, 2398
BshNI GGYRCC 3 cut(s) 323, 1441, 1495
BshTI ACCGGT 1 cut(s) 1351
BsiHKAI GWGCWC 4 cut(s) 33, 294, 740, 967
BsiHKCI CYCGRG 3 cut(s) 170, 2277, 2742
BslFI GGGAC 2 cut(s) 2485, 2789
BslI CCNNNNNNNGG 9 cut(s) 46, 137, 333, 1015, 1050, 1453, 1480, 1553, 1706
BsmAI GTCTC 6 cut(s) 167, 1904, 1941, 2641, 2663, 2750
BsmFI GGGAC 2 cut(s) 2485, 2789
BsmI GAATGC 1 cut(s) 2718
BsnI GGCC 5 cut(s) 5, 141, 1113, 2109, 2398
Bso31I GGTCTC 3 cut(s) 167, 1904, 2663
BsoBI CYCGRG 3 cut(s) 170, 2277, 2742
Bsp119I TTCGAA 1 cut(s) 712
Bsp1286I GDGCHC 7 cut(s) 33, 294, 651, 740, 901, 967, 1446
Bsp13I TCCGGA 3 cut(s) 286, 312, 3009
Bsp1720I GCTNAGC 1 cut(s) 293
BspANI GGCC 5 cut(s) 5, 141, 1113, 2109, 2398
BspCNI CTCAG 4 cut(s) 306, 382, 848, 2401
BspEI TCCGGA 3 cut(s) 286, 312, 3009
BspFNI CGCG 2 cut(s) 1236, 2877
BspPI GGATC 9 cut(s) 261, 278, 291, 534, 965, 1374, 1751, 1764, 2179
BspQI GCTCTTC 1 cut(s) 671
BspT104I TTCGAA 1 cut(s) 712
BspT107I GGYRCC 3 cut(s) 323, 1441, 1495
BspTI CTTAAG 2 cut(s) 2287, 2354
BspTNI GGTCTC 3 cut(s) 167, 1904, 2663
BsrFI RCCGGY 2 cut(s) 326, 1351
BsrI ACTGG 5 cut(s) 154, 1383, 1845, 2101, 2343
BssAI RCCGGY 2 cut(s) 326, 1351
BssECI CCNNGG 8 cut(s) 184, 1256, 1336, 1866, 2277, 2430, 2673, 2743
BssT1I CCWWGG 4 cut(s) 1256, 1336, 1866, 2430
Bst2UI CCWGG 5 cut(s) 719, 975, 1172, 1974, 2265
Bst4CI ACNGT 6 cut(s) 843, 916, 1480, 1835, 2005, 2599
Bst6I CTCTTC 1 cut(s) 671
BstAFI CTTAAG 2 cut(s) 2287, 2354
BstAPI GCANNNNNTGC 1 cut(s) 1862
BstBI TTCGAA 1 cut(s) 712
BstC8I GCNNGC 4 cut(s) 2197, 2248, 2252, 2604
BstENI CCTNNNNNAGG 1 cut(s) 1451
BstF5I GGATG 7 cut(s) 468, 589, 942, 1391, 1961, 2500, 2866
BstFNI CGCG 2 cut(s) 1236, 2877
BstMAI GTCTC 6 cut(s) 167, 1904, 1941, 2641, 2663, 2750
BstNI CCWGG 5 cut(s) 719, 975, 1172, 1974, 2265
BstNSI RCATGY 6 cut(s) 998, 1150, 1222, 1720, 2254, 2366
BstSFI CTRYAG 1 cut(s) 1425
BstSLI GKGCMC 3 cut(s) 651, 967, 1446
BstUI CGCG 2 cut(s) 1236, 2877
BstV1I GCAGC 8 cut(s) 204, 222, 388, 1587, 1762, 2056, 2239, 2539
BstV2I GAAGAC 2 cut(s) 1515, 2099
BstX2I RGATCY 4 cut(s) 283, 526, 1379, 1756
BstXI CCANNNNNNTGG 1 cut(s) 446
BstYI RGATCY 4 cut(s) 283, 526, 1379, 1756
BsuI GTATCC 1 cut(s) 1945
BsuRI GGCC 5 cut(s) 5, 141, 1113, 2109, 2398
BtsCI GGATG 7 cut(s) 468, 589, 942, 1391, 1961, 2500, 2866
BtsI GCAGTG 3 cut(s) 380, 740, 1585
Cac8I GCNNGC 4 cut(s) 2197, 2248, 2252, 2604
CaiI CAGNNNCTG 1 cut(s) 379
Cfr10I RCCGGY 2 cut(s) 326, 1351
Cfr13I GGNCC 7 cut(s) 258, 1349, 1388, 1870, 2396, 2472, 2921
Cfr9I CCCGGG 1 cut(s) 2277
CpoI CGGWCCG 1 cut(s) 258
CseI GACGC 1 cut(s) 17
CsiI ACCWGGT 1 cut(s) 1170
Csp6I GTAC 6 cut(s) 686, 935, 1153, 1956, 2294, 2595
CspAI ACCGGT 1 cut(s) 1351
CspI CGGWCCG 1 cut(s) 258
CviQI GTAC 6 cut(s) 686, 935, 1153, 1956, 2294, 2595
DrdI GACNNNNNNGTC 1 cut(s) 1172
DriI GACNNNNNGTC 1 cut(s) 2745
DseDI GACNNNNNNGTC 1 cut(s) 1172
EaeI YGGCCR 2 cut(s) 3, 1111
Eam1104I CTCTTC 1 cut(s) 671
Eam1105I GACNNNNNGTC 1 cut(s) 2745
EarI CTCTTC 1 cut(s) 671
EciI GGCGGA 2 cut(s) 41, 2934
Ecl136II GAGCTC 2 cut(s) 31, 292
Eco130I CCWWGG 4 cut(s) 1256, 1336, 1866, 2430
Eco24I GRGCYC 3 cut(s) 33, 294, 901
Eco31I GGTCTC 3 cut(s) 167, 1904, 2663
Eco47I GGWCC 6 cut(s) 258, 1349, 1388, 1870, 2472, 2921
Eco53kI GAGCTC 2 cut(s) 31, 292
Eco57I CTGAAG 2 cut(s) 80, 2319
Eco88I CYCGRG 3 cut(s) 170, 2277, 2742
EcoICRI GAGCTC 2 cut(s) 31, 292
EcoNI CCTNNNNNAGG 1 cut(s) 1451
EcoO109I RGGNCCY 1 cut(s) 1870
EcoRI GAATTC 1 cut(s) 1995
EcoRII CCWGG 5 cut(s) 717, 973, 1170, 1972, 2263
EcoT14I CCWWGG 4 cut(s) 1256, 1336, 1866, 2430
EcoT22I ATGCAT 2 cut(s) 551, 624
EcoT38I GRGCYC 3 cut(s) 33, 294, 901
ErhI CCWWGG 4 cut(s) 1256, 1336, 1866, 2430
FalI AAGNNNNNCTT 4 cut(s) 1934, 1966, 2056, 2088
FaqI GGGAC 2 cut(s) 2485, 2789
FauI CCCGC 2 cut(s) 1554, 2658
FauNDI CATATG 1 cut(s) 2167
FblI GTMKAC 1 cut(s) 1176
FokI GGATG 7 cut(s) 455, 596, 929, 1378, 1948, 2507, 2873
FriOI GRGCYC 3 cut(s) 33, 294, 901
FspBI CTAG 5 cut(s) 530, 573, 1737, 1904, 2640
GsaI CCCAGC 2 cut(s) 450, 654
HaeIII GGCC 5 cut(s) 5, 141, 1113, 2109, 2398
HgaI GACGC 1 cut(s) 17
HphI GGTGA 7 cut(s) 170, 298, 1719, 2099, 2111, 2576, 2993
Hpy166II GTNNAC 5 cut(s) 604, 635, 688, 965, 1177
Hpy8I GTNNAC 5 cut(s) 604, 635, 688, 965, 1177
Hpy99I CGWCG 1 cut(s) 11
HpyCH4III ACNGT 6 cut(s) 843, 916, 1480, 1835, 2005, 2599
HpyCH4IV ACGT 2 cut(s) 480, 2770
HpySE526I ACGT 2 cut(s) 480, 2770
Kpn2I TCCGGA 3 cut(s) 286, 312, 3009
LguI GCTCTTC 1 cut(s) 671
LmnI GCTCC 7 cut(s) 28, 36, 289, 743, 752, 1304, 2153
Lsp1109I GCAGC 8 cut(s) 204, 222, 388, 1587, 1762, 2056, 2239, 2539
LweI GCATC 7 cut(s) 312, 433, 536, 574, 869, 1469, 2485
MabI ACCWGGT 1 cut(s) 1170
MaeI CTAG 5 cut(s) 530, 573, 1737, 1904, 2640
MaeII ACGT 2 cut(s) 480, 2770
MaeIII GTNAC 3 cut(s) 158, 2161, 2256
MfeI CAATTG 1 cut(s) 2695
MflI RGATCY 4 cut(s) 283, 526, 1379, 1756
MhlI GDGCHC 7 cut(s) 33, 294, 651, 740, 901, 967, 1446
MlsI TGGCCA 1 cut(s) 1113
MluNI TGGCCA 1 cut(s) 1113
MlyI GAGTC 2 cut(s) 1529, 2138
MmeI TCCRAC 4 cut(s) 261, 774, 1757, 2026
Mox20I TGGCCA 1 cut(s) 1113
Mph1103I ATGCAT 2 cut(s) 551, 624
MroI TCCGGA 3 cut(s) 286, 312, 3009
MroXI GAANNNNTTC 1 cut(s) 131
MscI TGGCCA 1 cut(s) 1113
Msp20I TGGCCA 1 cut(s) 1113
MspA1I CMGCKG 3 cut(s) 201, 1549, 1775
MspCI CTTAAG 2 cut(s) 2287, 2354
MunI CAATTG 1 cut(s) 2695
Mva1269I GAATGC 1 cut(s) 2718
MvaI CCWGG 5 cut(s) 719, 975, 1172, 1974, 2265
MvnI CGCG 2 cut(s) 1236, 2877
NciI CCSGG 7 cut(s) 82, 186, 505, 2278, 2279, 2419, 2674
NdeI CATATG 1 cut(s) 2167
NmuCI GTSAC 2 cut(s) 158, 2161
NsiI ATGCAT 2 cut(s) 551, 624
NspI RCATGY 6 cut(s) 998, 1150, 1222, 1720, 2254, 2366
NspV TTCGAA 1 cut(s) 712
PaeI GCATGC 1 cut(s) 2254
PaeR7I CTCGAG 1 cut(s) 170
PciI ACATGT 3 cut(s) 994, 1218, 2362
PciSI GCTCTTC 1 cut(s) 671
PcsI WCGNNNNNNNCGW 1 cut(s) 801
PctI GAATGC 1 cut(s) 2718
PdmI GAANNNNTTC 1 cut(s) 131
PflMI CCANNNNNTGG 1 cut(s) 1480
PfoI TCCNGGA 1 cut(s) 973
PinAI ACCGGT 1 cut(s) 1351
PleI GAGTC 2 cut(s) 1528, 2137
PpsI GAGTC 2 cut(s) 1528, 2137
PpuMI RGGWCCY 1 cut(s) 1870
PscI ACATGT 3 cut(s) 994, 1218, 2362
PshBI ATTAAT 1 cut(s) 2156
Psp124BI GAGCTC 2 cut(s) 33, 294
Psp5II RGGWCCY 1 cut(s) 1870
Psp6I CCWGG 5 cut(s) 717, 973, 1170, 1972, 2263
PspFI CCCAGC 2 cut(s) 446, 650
PspGI CCWGG 5 cut(s) 717, 973, 1170, 1972, 2263
PspPI GGNCC 7 cut(s) 258, 1349, 1388, 1870, 2396, 2472, 2921
PspPPI RGGWCCY 1 cut(s) 1870
PstNI CAGNNNCTG 1 cut(s) 379
PsuI RGATCY 4 cut(s) 283, 526, 1379, 1756
PvuII CAGCTG 1 cut(s) 1775
RsaI GTAC 6 cut(s) 687, 936, 1154, 1957, 2295, 2596
RsaNI GTAC 6 cut(s) 686, 935, 1153, 1956, 2294, 2595
Rsr2I CGGWCCG 1 cut(s) 258
RsrII CGGWCCG 1 cut(s) 258
SacI GAGCTC 2 cut(s) 33, 294
SapI GCTCTTC 1 cut(s) 671
Sau96I GGNCC 7 cut(s) 258, 1349, 1388, 1870, 2396, 2472, 2921
SchI GAGTC 2 cut(s) 1529, 2138
SduI GDGCHC 7 cut(s) 33, 294, 651, 740, 901, 967, 1446
SexAI ACCWGGT 1 cut(s) 1170
SfaNI GCATC 7 cut(s) 312, 433, 536, 574, 869, 1469, 2485
SfcI CTRYAG 1 cut(s) 1425
Sfr274I CTCGAG 1 cut(s) 170
SfuI TTCGAA 1 cut(s) 712
SinI GGWCC 6 cut(s) 258, 1349, 1388, 1870, 2472, 2921
SlaI CTCGAG 1 cut(s) 170
SmaI CCCGGG 1 cut(s) 2279
SmlI CTYRAG 5 cut(s) 170, 1883, 1951, 2287, 2354
SmoI CTYRAG 5 cut(s) 170, 1883, 1951, 2287, 2354
SphI GCATGC 1 cut(s) 2254
SspI AATATT 1 cut(s) 789
SspMI CTAG 5 cut(s) 530, 573, 1737, 1904, 2640
SstI GAGCTC 2 cut(s) 33, 294
StyI CCWWGG 4 cut(s) 1256, 1336, 1866, 2430
TaaI ACNGT 6 cut(s) 843, 916, 1480, 1835, 2005, 2599
TaiI ACGT 2 cut(s) 483, 2773
TaqI TCGA 8 cut(s) 86, 108, 171, 230, 427, 556, 712, 1279
TaqII GACCGA 1 cut(s) 246
TatI WGTACW 2 cut(s) 934, 1955
TauI GCSGC 3 cut(s) 204, 1575, 1610
TseFI GTSAC 2 cut(s) 158, 2161
TseI GCWGC 8 cut(s) 192, 210, 401, 1575, 1775, 2069, 2227, 2552
Tsp45I GTSAC 2 cut(s) 158, 2161
TspGWI ACGGA 3 cut(s) 266, 793, 2793
TspMI CCCGGG 1 cut(s) 2277
Van91I CCANNNNNTGG 1 cut(s) 1480
Vha464I CTTAAG 2 cut(s) 2287, 2354
VneI GTGCAC 1 cut(s) 963
VpaK11BI GGWCC 6 cut(s) 258, 1349, 1388, 1870, 2472, 2921
VspI ATTAAT 1 cut(s) 2156
XagI CCTNNNNNAGG 1 cut(s) 1451
XapI RAATTY 6 cut(s) 430, 510, 824, 1001, 1288, 1995
XbaI TCTAGA 1 cut(s) 572
XceI RCATGY 6 cut(s) 998, 1150, 1222, 1720, 2254, 2366
XhoI CTCGAG 1 cut(s) 170
XmaI CCCGGG 1 cut(s) 2277
XmiI GTMKAC 1 cut(s) 1176
XmnI GAANNNNTTC 1 cut(s) 131
XspI CTAG 5 cut(s) 530, 573, 1737, 1904, 2640
Zsp2I ATGCAT 2 cut(s) 551, 624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.