Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0009301

Physical Location & Seq

Genomic Coordinates Reverse (-)

956289 .. 959950

Gene Structure 3662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG012000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGGTGAACTTGCTGGAATCCATGCATAAATGTTGTTTACCATCTGGGGTGCCAAGTGAATCCCCTAGTGCCTATGAGAAGAGTTTGGTACACAAGATCTTTGGTGGTCGCCTTCGAAGTCGGGTCAAATGTTTGCAGTGCTCCTATTGCTCTGACAAGTTAGATCCATTCTTAGATTTAAGTCTTGAAATAGCCAAGGCAAACTCTTTGAATAAAGCACTTGTGAACTTTACTGCTGAAGAACAGTTGGATGGTGGGGAAAGGCAATATCAGTGCCAAAGATGCAATCAGAAAGTTCGAGCTATGAAACAGATGACCATTCACAAGCCGCCTAGTGTTCTGTCCATCCATTTAAAGCGGTTTCGTGCATATGACCCTGGACAAAAAATTAACAAAGAAGTTCAGTTTGGTCCTACGTTGGACTTGAGACCTTTTGTCAGTGGAGCATATCCGGAAGGAGATTTGAAATATACTCTTTATGGGGTTCTAGTTCATTGTGGGGCTAGCACCTATTCCGGTCATTATTATTGCTTTGTTCGAACATCAACTGGCATATGGCACTCTCTGGATGACAACAATGTAAGGCAAGTTCGTGAGATGACTGTTTTGCAGCAAAAGGCTTACATGTTGTTCTATGTACGTGATAGAAGAAATATTATTCCAAGGAAGCCTGCTGATGTTGCTCAAAAGGAGTATTTCAAACCTAATGGTACTGTAAATAAAATTACTCCTACTGACAACCATTTGTCGAAAGAACCTATTCGAAAAATTGCAGTTGCGGGCAGATCAAATGATCTAGCCTCTTCTGTTGCACAAAAAGATGCATCAGCTATTGTCCCAAGGGTGTCCCATTTGAAGGAAGCATCAGTTAATCAAAATAATGGCCACATAGTGGCACAAAATATGGTGCGTAAGAAGGAAGCCATTTCAGAATTGTCTTTGAAAGCATCATTATCAGAGGGCTCATTGGGAGGATTAGGGGAAAATATGCCACCATCTACTCTGCTTCCAAGCCGCAAAACTGGCACTTCTGATTCTGCAAGTGCTGTGGCTTCAACAACTGGTGCCAAACTAAATGACTGCAATGAGAAAGCAAGTTCAAATGATAATGATAGGGTTTCAATTATGATATCACCTACTGTGAAGGACCCTGAAATCTTGAAGGCATCTAAGCCTGTTCAAGATGAGATCCCTCAGAATAAGAATCATGCTTCCGGTGCTGGGAATTTGAGTGTGGCTTCATCCAGAATTCCTAACGGTTTAACATTGGAGAAGCTGAATCCTGAAAAGCCATCTGATCCACCAAGCTCTAGAATCAGTCAGGCTGGAAGCCTTACCAATGAACGTGAGAAGGCTAGTGATTGTGGCCAGACAGTGGTAGTTTCTGATTCTGCAAAATTGGCTGGCTCATCAGTTGTGACAAATAGATCATTAGATTTGGAAGCTCCTGACCGCAAGTACCCTAAGGGATTGAAAAAGAAGCACATAAAGTGTAAGGTGGTAGGCATGCATTTCCGGCCATTCTTGCTTTCTAGGGCAGTCTTAAGTGTGCGGAATAAGAAGAAGCACAAAAGGAGTAAACACCCAACTTCAGATTGTAAGAGCCATAGTAAGAAATACTTGGTAGAAAATTATTGTTCTTCATCTGATCAAGGACCATCTACATCTGAGAAAACCCAGACCGATTCCTTGGTTTCTGTCTGTTCGAAGAGAAAGAGAAACAAATCTGGCTTGAAAACGGATGAAGATGGAACTTCTAATAAGTGCTCACTGAATCCCCGTGGTGATTCTTCGATGGATATTAAAGATGTAGAGTTTAGAGAGAGCCTCAATCAGAATGGAACAGTGCTTGCAAGTGATAAACAACAACAAAATGGTTTTGGCTCCTCCTCTGTTACATTGGAAAACAAAAGGGTGTCGAGAGGAACTGATACTCCACACAATTGTAAAAGTGATGCAATGCAAAATGGATGGAAGGGCGTGCTGACTCAGGGTCCAGCGGAGACAATTGTTGCACCTTGGGATGGAATAGAGTTGCCTCAGTCTCATGTTGTAGAACCAAGCCATGCACAGAGTATCACCATCGGTTATGTAGGAGATGATTGGGATGAAGAATATGATCGGGGAAAGAGAAAGAAGGTAAGGCAAGCAAAACTCACCCCTGGTGGGCCAAATCCTTTCCAAATACTTGCAAACAAGAAAGCACAATTGAAGCAACCAAGGATACAAAGGTTTGATTCTGGAAATCGACCAGTCAGGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

754

Amino Acids

83.01

Weight (kDa)

9.52

Isoelectric Point (pI)

44.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	2 - 212	8.1e-36	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	19 - 193	4.2e-10	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57990
fragaria_vesca	FvH4_1g01010 FvH4_1g01010 FvH4_1g01010
malus_domestica	MD02G1008300.v1.1 MD15G1152500.v1.1
prunus_persica	Prupe.7G262200_v2.0.a1
pyrus_communis	pycom02g00720 pycom15g13710
rosa_chinensis	RchiOBHm_Chr2g0085751
rosa_laevigata	RLG00000015716
rosa_multiflora	Rmu_sc0009759.1_g000004 Rmu_sc0023131.1_g000003 Rmu_sc0033740.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155070
rosa_rugosa	Rorug01G0462900 Rorug01G0462900
rosa_samantha	Rh2AG012000 Rh2BG012600 Rh2CG013400 Rh2DG014400
rosa_wichuraiana	Rw2G001070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	49, 1064
AccB7I	CCANNNNNTGG	2 cut(s)	892, 1375
AccIII	TCCGGA	1 cut(s)	451
AciI	CCGC	7 cut(s)	329, 358, 779, 1015, 1453, 1552, 2000
AclWI	GGATC	3 cut(s)	158, 1183, 1292
AcoI	YGGCCR	3 cut(s)	883, 1366, 1517
AcsI	RAATTY	2 cut(s)	1225, 1248
AcuI	CTGAAG	2 cut(s)	258, 1575
AdeI	CACNNNGTG	1 cut(s)	892
AfaI	GTAC	4 cut(s)	90, 639, 712, 1460
AfiI	CCNNNNNNNGG	6 cut(s)	856, 892, 1221, 1375, 2024, 2166
AflII	CTTAAG	1 cut(s)	1543
AflIII	ACRYGT	1 cut(s)	624
AhdI	GACNNNNNGTC	2 cut(s)	434, 1992
AjnI	CCWGG	2 cut(s)	376, 2161
AjuI	GAANNNNNNNTTGG	2 cut(s)	390, 422
AloI	GAACNNNNNNTCC	2 cut(s)	1918, 1950
AluBI	AGCT	5 cut(s)	302, 830, 1276, 1308, 1445
AluI	AGCT	5 cut(s)	302, 830, 1276, 1308, 1445
Alw21I	GWGCWC	2 cut(s)	143, 1769
Alw26I	GTCTC	3 cut(s)	421, 1997, 2049
AlwI	GGATC	3 cut(s)	158, 1183, 1292
Aor13HI	TCCGGA	1 cut(s)	451
AoxI	GGCC	4 cut(s)	883, 1366, 1517, 2168
ApeKI	GCWGC	1 cut(s)	610
ApoI	RAATTY	2 cut(s)	1225, 1248
Asp700I	GAANNNNTTC	1 cut(s)	759
AspS9I	GGNCC	5 cut(s)	410, 1147, 1655, 1994, 2168
AsuHPI	GGTGA	5 cut(s)	16, 1125, 1796, 2071, 2149
AsuII	TTCGAA	4 cut(s)	115, 538, 763, 1706
AsuNHI	GCTAGC	1 cut(s)	503
AvaII	GGWCC	4 cut(s)	410, 1147, 1655, 1994
AxyI	CCTNAGG	1 cut(s)	1464
BaeI	ACNNNNGTAYC	2 cut(s)	2216, 2249
BalI	TGGCCA	2 cut(s)	885, 1368
BanI	GGYRCC	2 cut(s)	49, 1064
BanII	GRGCYC	1 cut(s)	965
Bbv12I	GWGCWC	2 cut(s)	143, 1769
BbvI	GCAGC	1 cut(s)	622
BciT130I	CCWGG	2 cut(s)	378, 2163
BciVI	GTATCC	1 cut(s)	2217
BclI	TGATCA	1 cut(s)	1648
BcoDI	GTCTC	3 cut(s)	421, 1997, 2049
BfaI	CTAG	8 cut(s)	66, 333, 488, 504, 797, 1311, 1356, 1533
BfrI	CTTAAG	1 cut(s)	1543
BfuI	GTATCC	1 cut(s)	2217
BglII	AGATCT	1 cut(s)	96
BisI	GCNGC	3 cut(s)	329, 611, 1015
BlsI	GCNGC	3 cut(s)	330, 612, 1016
Bme1390I	CCNGG	2 cut(s)	378, 2163
Bme18I	GGWCC	4 cut(s)	410, 1147, 1655, 1994
BmeRI	GACNNNNNGTC	2 cut(s)	434, 1992
BmgT120I	GGNCC	5 cut(s)	410, 1147, 1655, 1994, 2168
BmiI	GGNNCC	5 cut(s)	51, 1066, 1149, 1885, 1995
BmrFI	CCNGG	2 cut(s)	378, 2163
BmsI	GCATC	7 cut(s)	272, 811, 833, 872, 956, 1175, 1945
BmtI	GCTAGC	1 cut(s)	507
BplI	GAGNNNNNCTC	2 cut(s)	1812, 1844
Bpu14I	TTCGAA	4 cut(s)	115, 538, 763, 1706
BpuEI	CTTGAG	1 cut(s)	445
BsaAI	YACGTR	1 cut(s)	641
BsaI	GGTCTC	1 cut(s)	421
BsaJI	CCNNGG	9 cut(s)	195, 376, 662, 839, 1689, 1780, 2018, 2161, 2219
BsaWI	WCCGGW	3 cut(s)	451, 515, 1214
BsaXI	ACNNNNNCTCC	2 cut(s)	1918, 1948
Bsc4I	CCNNNNNNNGG	6 cut(s)	856, 892, 1221, 1375, 2024, 2166
Bse1I	ACTGG	4 cut(s)	553, 1027, 1066, 2252
Bse21I	CCTNAGG	1 cut(s)	1464
Bse3DI	GCAATG	2 cut(s)	1090, 1965
BseAI	TCCGGA	1 cut(s)	451
BseBI	CCWGG	2 cut(s)	378, 2163
BseDI	CCNNGG	9 cut(s)	195, 376, 662, 839, 1689, 1780, 2018, 2161, 2219
BseGI	GGATG	8 cut(s)	256, 345, 574, 1241, 1747, 1976, 2029, 2113
BseLI	CCNNNNNNNGG	6 cut(s)	856, 892, 1221, 1375, 2024, 2166
BseMI	GCAATG	2 cut(s)	1090, 1965
BseMII	CTCAG	4 cut(s)	1208, 1659, 2003, 2054
BseNI	ACTGG	4 cut(s)	553, 1027, 1066, 2252
BseRI	GAGGAG	2 cut(s)	1876, 1879
BseXI	GCAGC	1 cut(s)	622
BseYI	CCCAGC	1 cut(s)	1220
BshFI	GGCC	4 cut(s)	885, 1368, 1519, 2170
BshNI	GGYRCC	2 cut(s)	49, 1064
BsiHKAI	GWGCWC	2 cut(s)	143, 1769
BsiSI	CCGG	4 cut(s)	452, 516, 1215, 1516
BslFI	GGGAC	2 cut(s)	821, 832
BslI	CCNNNNNNNGG	6 cut(s)	856, 892, 1221, 1375, 2024, 2166
BsmAI	GTCTC	3 cut(s)	421, 1997, 2049
BsmFI	GGGAC	2 cut(s)	821, 832
BsnI	GGCC	4 cut(s)	885, 1368, 1519, 2170
Bso31I	GGTCTC	1 cut(s)	421
Bsp119I	TTCGAA	4 cut(s)	115, 538, 763, 1706
Bsp1286I	GDGCHC	3 cut(s)	143, 965, 1769
Bsp13I	TCCGGA	1 cut(s)	451
Bsp143I	GATC	9 cut(s)	96, 163, 785, 793, 1188, 1297, 1427, 1648, 2119
BspACI	CCGC	7 cut(s)	329, 358, 779, 1015, 1453, 1552, 2000
BspANI	GGCC	4 cut(s)	885, 1368, 1519, 2170
BspCNI	CTCAG	4 cut(s)	1207, 1660, 2002, 2053
BspEI	TCCGGA	1 cut(s)	451
BspLI	GGNNCC	5 cut(s)	51, 1066, 1149, 1885, 1995
BspOI	GCTAGC	1 cut(s)	507
BspPI	GGATC	3 cut(s)	158, 1183, 1292
BspT104I	TTCGAA	4 cut(s)	115, 538, 763, 1706
BspT107I	GGYRCC	2 cut(s)	49, 1064
BspTI	CTTAAG	1 cut(s)	1543
BspTNI	GGTCTC	1 cut(s)	421
BsrDI	GCAATG	2 cut(s)	1090, 1965
BsrI	ACTGG	4 cut(s)	553, 1027, 1066, 2252
BssECI	CCNNGG	9 cut(s)	195, 376, 662, 839, 1689, 1780, 2018, 2161, 2219
BssMI	GATC	9 cut(s)	96, 163, 785, 793, 1188, 1297, 1427, 1648, 2119
BssT1I	CCWWGG	6 cut(s)	195, 662, 839, 1689, 2018, 2219
Bst2UI	CCWGG	2 cut(s)	378, 2163
Bst4CI	ACNGT	7 cut(s)	246, 604, 715, 1141, 1259, 1375, 1846
Bst6I	CTCTTC	3 cut(s)	74, 808, 1703
BstAFI	CTTAAG	1 cut(s)	1543
BstBAI	YACGTR	1 cut(s)	641
BstBI	TTCGAA	4 cut(s)	115, 538, 763, 1706
BstC8I	GCNNGC	8 cut(s)	505, 672, 781, 1405, 1508, 1851, 1982, 2148
BstDEI	CTNAG	7 cut(s)	172, 1170, 1194, 1464, 1668, 1989, 2040
BstDSI	CCRYGG	1 cut(s)	1780
BstF5I	GGATG	8 cut(s)	256, 345, 574, 1241, 1747, 1976, 2029, 2113
BstKTI	GATC	9 cut(s)	99, 166, 788, 796, 1191, 1300, 1430, 1651, 2122
BstMAI	GTCTC	3 cut(s)	421, 1997, 2049
BstMBI	GATC	9 cut(s)	96, 163, 785, 793, 1188, 1297, 1427, 1648, 2119
BstMWI	GCNNNNNNNGC	8 cut(s)	147, 282, 680, 1023, 1217, 1400, 1516, 1525
BstNI	CCWGG	2 cut(s)	378, 2163
BstNSI	RCATGY	2 cut(s)	628, 1510
BstSCI	CCNGG	2 cut(s)	376, 2161
BstV1I	GCAGC	1 cut(s)	622
BstX2I	RGATCY	3 cut(s)	96, 163, 1188
BstYI	RGATCY	3 cut(s)	96, 163, 1188
Bsu36I	CCTNAGG	1 cut(s)	1464
BsuI	GTATCC	1 cut(s)	2217
BsuRI	GGCC	4 cut(s)	885, 1368, 1519, 2170
BtgI	CCRYGG	1 cut(s)	1780
BtsCI	GGATG	8 cut(s)	256, 345, 574, 1241, 1747, 1976, 2029, 2113
BtsI	GCAGTG	1 cut(s)	143
BtsIMutI	CAGTG	6 cut(s)	143, 278, 445, 1380, 1769, 1851
Cac8I	GCNNGC	8 cut(s)	505, 672, 781, 1405, 1508, 1851, 1982, 2148
Cfr13I	GGNCC	5 cut(s)	410, 1147, 1655, 1994, 2168
Csp6I	GTAC	4 cut(s)	89, 638, 711, 1459
CspCI	CAANNNNNGTGG	2 cut(s)	1029, 1064
CviAII	CATG	6 cut(s)	22, 625, 1208, 1507, 2048, 2066
CviQI	GTAC	4 cut(s)	89, 638, 711, 1459
DdeI	CTNAG	7 cut(s)	172, 1170, 1194, 1464, 1668, 1989, 2040
DpnI	GATC	9 cut(s)	98, 165, 787, 795, 1190, 1299, 1429, 1650, 2121
DpnII	GATC	9 cut(s)	96, 163, 785, 793, 1188, 1297, 1427, 1648, 2119
DraI	TTTAAA	1 cut(s)	354
DraIII	CACNNNGTG	1 cut(s)	892
DriI	GACNNNNNGTC	2 cut(s)	434, 1992
EaeI	YGGCCR	3 cut(s)	883, 1366, 1517
Eam1104I	CTCTTC	3 cut(s)	74, 808, 1703
Eam1105I	GACNNNNNGTC	2 cut(s)	434, 1992
EarI	CTCTTC	3 cut(s)	74, 808, 1703
Eco130I	CCWWGG	6 cut(s)	195, 662, 839, 1689, 2018, 2219
Eco24I	GRGCYC	1 cut(s)	965
Eco31I	GGTCTC	1 cut(s)	421
Eco32I	GATATC	1 cut(s)	1131
Eco47I	GGWCC	4 cut(s)	410, 1147, 1655, 1994
Eco57I	CTGAAG	2 cut(s)	258, 1575
Eco81I	CCTNAGG	1 cut(s)	1464
EcoO109I	RGGNCCY	1 cut(s)	1147
EcoRI	GAATTC	1 cut(s)	1248
EcoRII	CCWGG	2 cut(s)	376, 2161
EcoRV	GATATC	1 cut(s)	1131
EcoT14I	CCWWGG	6 cut(s)	195, 662, 839, 1689, 2018, 2219
EcoT22I	ATGCAT	3 cut(s)	27, 826, 1512
EcoT38I	GRGCYC	1 cut(s)	965
ErhI	CCWWGG	6 cut(s)	195, 662, 839, 1689, 2018, 2219
FaeI	CATG	6 cut(s)	25, 628, 1211, 1510, 2051, 2069
FalI	AAGNNNNNCTT	2 cut(s)	1604, 1636
FaqI	GGGAC	2 cut(s)	821, 832
FatI	CATG	6 cut(s)	21, 624, 1207, 1506, 2047, 2065
FauI	CCCGC	1 cut(s)	772
FauNDI	CATATG	2 cut(s)	370, 554
FbaI	TGATCA	1 cut(s)	1648
Fnu4HI	GCNGC	3 cut(s)	329, 611, 1015
FokI	GGATG	8 cut(s)	263, 332, 581, 1228, 1754, 1983, 2036, 2120
FriOI	GRGCYC	1 cut(s)	965
Fsp4HI	GCNGC	3 cut(s)	329, 611, 1015
FspBI	CTAG	8 cut(s)	66, 333, 488, 504, 797, 1311, 1356, 1533
GluI	GCNGC	3 cut(s)	329, 611, 1015
GsaI	CCCAGC	1 cut(s)	1224
HaeIII	GGCC	4 cut(s)	885, 1368, 1519, 2170
HapII	CCGG	4 cut(s)	452, 516, 1215, 1516
Hin1II	CATG	6 cut(s)	25, 628, 1211, 1510, 2051, 2069
HpaII	CCGG	4 cut(s)	452, 516, 1215, 1516
HphI	GGTGA	5 cut(s)	16, 1125, 1796, 2071, 2149
Hpy166II	GTNNAC	5 cut(s)	7, 38, 91, 226, 1580
Hpy8I	GTNNAC	5 cut(s)	7, 38, 91, 226, 1580
HpyAV	CCTTC	9 cut(s)	122, 449, 850, 910, 1138, 1156, 1345, 1969, 2131
HpyCH4III	ACNGT	7 cut(s)	246, 604, 715, 1141, 1259, 1375, 1846
HpyCH4IV	ACGT	3 cut(s)	416, 640, 1345
HpyF10VI	GCNNNNNNNGC	8 cut(s)	147, 282, 680, 1023, 1217, 1400, 1516, 1525
HpyF3I	CTNAG	7 cut(s)	172, 1170, 1194, 1464, 1668, 1989, 2040
HpySE526I	ACGT	3 cut(s)	416, 640, 1345
Hsp92II	CATG	6 cut(s)	25, 628, 1211, 1510, 2051, 2069
Kpn2I	TCCGGA	1 cut(s)	451
Ksp22I	TGATCA	1 cut(s)	1648
Kzo9I	GATC	9 cut(s)	96, 163, 785, 793, 1188, 1297, 1427, 1648, 2119
LmnI	GCTCC	4 cut(s)	146, 443, 1450, 1889
Lsp1109I	GCAGC	1 cut(s)	622
LweI	GCATC	7 cut(s)	272, 811, 833, 872, 956, 1175, 1945
MaeI	CTAG	8 cut(s)	66, 333, 488, 504, 797, 1311, 1356, 1533
MaeII	ACGT	3 cut(s)	416, 640, 1345
MaeIII	GTNAC	2 cut(s)	1417, 1894
MalI	GATC	9 cut(s)	98, 165, 787, 795, 1190, 1299, 1429, 1650, 2121
MboI	GATC	9 cut(s)	96, 163, 785, 793, 1188, 1297, 1427, 1648, 2119
MfeI	CAATTG	3 cut(s)	1942, 2007, 2207
MflI	RGATCY	3 cut(s)	96, 163, 1188
MhlI	GDGCHC	3 cut(s)	143, 965, 1769
MlsI	TGGCCA	2 cut(s)	885, 1368
MluNI	TGGCCA	2 cut(s)	885, 1368
MlyI	GAGTC	1 cut(s)	1981
MmeI	TCCRAC	2 cut(s)	228, 399
MnlI	CCTC	9 cut(s)	811, 952, 965, 1203, 1838, 1897, 1900, 1916, 2049
Mox20I	TGGCCA	2 cut(s)	885, 1368
Mph1103I	ATGCAT	3 cut(s)	27, 826, 1512
MroI	TCCGGA	1 cut(s)	451
MroXI	GAANNNNTTC	1 cut(s)	759
MscI	TGGCCA	2 cut(s)	885, 1368
MseI	TTAA	7 cut(s)	179, 353, 390, 870, 1262, 1544, 1803
Msp20I	TGGCCA	2 cut(s)	885, 1368
MspA1I	CMGCKG	1 cut(s)	2000
MspCI	CTTAAG	1 cut(s)	1543
MspI	CCGG	4 cut(s)	452, 516, 1215, 1516
MspR9I	CCNGG	2 cut(s)	378, 2163
MunI	CAATTG	3 cut(s)	1942, 2007, 2207
MvaI	CCWGG	2 cut(s)	378, 2163
MwoI	GCNNNNNNNGC	8 cut(s)	147, 282, 680, 1023, 1217, 1400, 1516, 1525
NdeI	CATATG	2 cut(s)	370, 554
NdeII	GATC	9 cut(s)	96, 163, 785, 793, 1188, 1297, 1427, 1648, 2119
NheI	GCTAGC	1 cut(s)	503
NlaIII	CATG	6 cut(s)	25, 628, 1211, 1510, 2051, 2069
NlaIV	GGNNCC	5 cut(s)	51, 1066, 1149, 1885, 1995
NmuCI	GTSAC	1 cut(s)	1417
NsiI	ATGCAT	3 cut(s)	27, 826, 1512
NspI	RCATGY	2 cut(s)	628, 1510
NspV	TTCGAA	4 cut(s)	115, 538, 763, 1706
PaeI	GCATGC	1 cut(s)	1510
PciI	ACATGT	1 cut(s)	624
PdmI	GAANNNNTTC	1 cut(s)	759
PflMI	CCANNNNNTGG	2 cut(s)	892, 1375
PkrI	GCNGC	3 cut(s)	330, 612, 1016
PleI	GAGTC	1 cut(s)	1981
PpsI	GAGTC	1 cut(s)	1981
Ppu21I	YACGTR	1 cut(s)	641
PpuMI	RGGWCCY	1 cut(s)	1147
PscI	ACATGT	1 cut(s)	624
Psp5II	RGGWCCY	1 cut(s)	1147
Psp6I	CCWGG	2 cut(s)	376, 2161
PspFI	CCCAGC	1 cut(s)	1220
PspGI	CCWGG	2 cut(s)	376, 2161
PspN4I	GGNNCC	5 cut(s)	51, 1066, 1149, 1885, 1995
PspPI	GGNCC	5 cut(s)	410, 1147, 1655, 1994, 2168
PspPPI	RGGWCCY	1 cut(s)	1147
PsrI	GAACNNNNNNTAC	2 cut(s)	573, 605
PsuI	RGATCY	3 cut(s)	96, 163, 1188
RsaI	GTAC	4 cut(s)	90, 639, 712, 1460
RsaNI	GTAC	4 cut(s)	89, 638, 711, 1459
SaqAI	TTAA	7 cut(s)	179, 353, 390, 870, 1262, 1544, 1803
SatI	GCNGC	3 cut(s)	329, 611, 1015
Sau3AI	GATC	9 cut(s)	96, 163, 785, 793, 1188, 1297, 1427, 1648, 2119
Sau96I	GGNCC	5 cut(s)	410, 1147, 1655, 1994, 2168
SchI	GAGTC	1 cut(s)	1981
ScrFI	CCNGG	2 cut(s)	378, 2163
SduI	GDGCHC	3 cut(s)	143, 965, 1769
SfaNI	GCATC	7 cut(s)	272, 811, 833, 872, 956, 1175, 1945
SfuI	TTCGAA	4 cut(s)	115, 538, 763, 1706
SinI	GGWCC	4 cut(s)	410, 1147, 1655, 1994
SmlI	CTYRAG	2 cut(s)	424, 1543
SmoI	CTYRAG	2 cut(s)	424, 1543
SphI	GCATGC	1 cut(s)	1510
SsiI	CCGC	7 cut(s)	329, 358, 779, 1015, 1453, 1552, 2000
SspI	AATATT	1 cut(s)	655
SspMI	CTAG	8 cut(s)	66, 333, 488, 504, 797, 1311, 1356, 1533
StyD4I	CCNGG	2 cut(s)	376, 2161
StyI	CCWWGG	6 cut(s)	195, 662, 839, 1689, 2018, 2219
TaaI	ACNGT	7 cut(s)	246, 604, 715, 1141, 1259, 1375, 1846
TaiI	ACGT	3 cut(s)	419, 643, 1348
TaqI	TCGA	9 cut(s)	115, 298, 538, 749, 763, 1706, 1793, 1919, 2248
TaqII	GACCGA	1 cut(s)	1697
TauI	GCSGC	2 cut(s)	331, 1017
Tru1I	TTAA	7 cut(s)	179, 353, 390, 870, 1262, 1544, 1803
Tru9I	TTAA	7 cut(s)	179, 353, 390, 870, 1262, 1544, 1803
TscAI	CASTG	6 cut(s)	143, 278, 445, 1380, 1776, 1851
TseFI	GTSAC	1 cut(s)	1417
TseI	GCWGC	1 cut(s)	610
Tsp45I	GTSAC	1 cut(s)	1417
TspDTI	ATGAA	7 cut(s)	320, 482, 1230, 1356, 1632, 1758, 2124
TspGWI	ACGGA	1 cut(s)	1754
TspRI	CASTG	6 cut(s)	143, 278, 445, 1380, 1776, 1851
Van91I	CCANNNNNTGG	2 cut(s)	892, 1375
Vha464I	CTTAAG	1 cut(s)	1543
VpaK11BI	GGWCC	4 cut(s)	410, 1147, 1655, 1994
XapI	RAATTY	2 cut(s)	1225, 1248
XbaI	TCTAGA	1 cut(s)	1310
XceI	RCATGY	2 cut(s)	628, 1510
XmnI	GAANNNNTTC	1 cut(s)	759
XspI	CTAG	8 cut(s)	66, 333, 488, 504, 797, 1311, 1356, 1533
Zsp2I	ATGCAT	3 cut(s)	27, 826, 1512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.