Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009301

Physical Location & Seq

Genomic Coordinates Reverse (-)

1047231 .. 1052925

Gene Structure 5695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46129

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2880 bp

ATGGCCGACGTGTTCAATCCGGCAATCCGATCGGGTCAGAGTTCGGATCCGCAGCTCAAATCGGCGGAGGAGGCATCGCCGTTTCCGAGGATCGAGTTTCATCTGGCGCGGAAGCCATTCAAGGGCTTTAACAATGACGGCAGTGACTTCCGGCCTGAGACGCTTAATCCGGGGAGCGGTGGCAGCTCGGATTCTCGTAAACCCGGCGGCCTGGCAGGTCAGGGTCAGTCGGGTTCGGGTTCGGTTTCGGTTTCCGGAGCGAAGAAGAGTGACGGGTCGGAGTTTTTGGAAAACGGGTGGGATCCGGAGCTCAGCTTTCCCATCACATTTCGGAGAATTGGTGCTGGTTTGATAAATATGGGGAATACTTGTTATCTCAATTCAGTGTTGCAGTGCCTGACATATACTGAGCCTTTAGCTGCATACCTGCAAAGTGGCAGGCATCGGAATTCTTGTCATATAAAAAATGGGTTTTGTGCTTTATGTGCCATCCAAGAGCACGTCAGTCTTGCTCTACAATCAACCAAGAGCATTTTGCCAAAGGCTCTTGTCTTCAATCTACAACGCATATCGCGGAACTTTAGGAAGTCCAGACAGGAAGATGCACATGAATACATGGTAAACTTGCTGGAATCCATGCATAAATGTTGTTTACCATCTGGAGTGCCAAGTGAATCCCCTAGTGCCTATGAGAAGAGTTTGGTACACAAGATCTTTGGTGGTCGCCTTCGAAGTCGGGTCAAATGTTTGCAGTGCTCCTATTGCTCTGACAAGTTAGATCCATTCTTAGATTTAAGTCTTGAAATAGCCAAGGCAAACTCTTTGAATAAAGCACTTGTGAACTTTACTGCTGAAGAACAGTTGGATGGTGGGGAAAGGCAATATCAGTGCCAAAGATGCAATCAGAAAGTTCGAGCTATGAAACAGATGACCATTCACAAGCCGCCTAGTGTTCTGTCCATCCATTTAAAGCGGTTTCGTGCATATGACCCTGGACAAAAAATTAACAAAGAAGTTCAGTTTGGTCCTACGTTGGACTTGAGACCTTTTGTCAGTGGAGCATATCCGGAAGGAGATTTGAAATATACTCTTTATGGGGTTCTAGTTCATTGTGGGGCTAGCACCTATTCCGGCCATTATTATTGCTTTGTTCGAACATCAACTGGCATTTGGCACTCTCTGGATGACAACAATGTAAGGCAAGTTCGTGAGATGACTGTTTTGCAGCAAAAGGCGTACATGTTGTTCTATGTACGTGATAGAAGAAATATTATTCCAAGGAAGCCTGTTGATGTTGCTCAAAAGGAGTATTTCAAACCTAATGGTACTGTAAATAAAATTACTCCTACTGACAACCATTTGTCGAAAGAACCTATTCGAAAAATTGCAGTTGCGGGCAGATCCAATGATCTAGCCTCTTCTGTTGCACAAAAAGATGCATCAGCTATTGTCCCAAGGGTGTCCCATTTGAAGGAAGCATCAGTTAATCAAAATAATGGCCACCTAGTGGCACAAAATATGGTGCGTAAGAAGGAAGCCATTTCAGAATCGTCTTTGATAGCGTCATTATCAGAGGGCTCATTGGGAGGATTAGGAGAAAATATGCCACCATCTACTCTGCTTCCAAGCCGCAAAACTGGCACTTCTGATTCTGCAAGTGCTGTGGCTTCAACAACTGGTGCCAAACTAAATGACTGCAATGAGAAAGCAAGTTCAAATGATAATGAAAGGGTTTCAATTATGATATCACCTACTGTGAAGGACCCTGAAATCTTGAAGGCATCGAAGCCTGTTCAAGATGAGATCCCTCAGAATAAAAATCATGCTTCCGGTGCTGGGAATTTGAGTGTGGCTTCATCCAGAATTCCAAATGGTTTGACATTGGAGAAGCTGAATCCTGAAAAGCCATCTGATCCACCAAGCTCTAGAATCAGTCAGGCTGGAAGTTTTACCAATGAACGTGAGAAGGCTAGTGATTGTGGCCAGACAGTGGTAGTTTCTGATTCTGCAAAATTGTCTGGCTCATCAGTTGTGACAAATAGATCATTAGATTTGGAAGCTCCTGACCGCAAGCACCCTAAAGGATTGAAAAAGAAGCACATAAAGTGTAAGGTGGTAGGCATGCATTTCCGGCCATCCTTGCTTTCTAGGGCAGTCTTAAGGGTGCAGAAGAAGAAGAAGCACAAAAGGAGTAAACACCTAACTTCAGATTTTAAGAGCCATAGTAAGAAATACTTGGTAGAAAATTATTGTTCTTCATCTGATCAAGGACCATCTACATCTGAGAAAACCCAGACAGATTCCTTGGTTTCTGTCTGTTCGAAGAGAAAGAGAAACAAATCTGGCTTGAAAACAGATGAAGATGGAACTTCTAATAAGTGCTCAGAGAATCCCCATGGTGATTCTTCGATGGATATTAAAGATGTAGAGTTTAGAGAGAGCCTCATTCAGAATGGAACAGTGCTTGCAAGTGATAAACAACAACAAAATGGTTTTGGCTCTTCCTCTGTTACATTGGAAAACAAAAGGGTGTCGAGAGGAACTGATACTCCACACAATTGTAAAAGTGATGCAATGCAAAATGGATGGAAGGGTGTGCTGACTCAGGGTCCAGTGGAGACAATTGTTGCACCTTGGGATGGAATAGAATTGCCTCAGTCTCATGTTGTAGAATCAAGCCATGCACAGAGTATCACCATCGGTTATGTAGGAGATGATTGGGATGAAGAATATGATCGGGGAAAGAGAAAGAAGGTAAGGCAAGCAAAACTCACCCCTGGTGGGCCAAATCCTTTCCAAATACTTGCAAACAAGAAAGCACAATTGAAGCAACCAAGGATACAAAGGTTTGATTCTGGAAATCGACCAGTCAGGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

959

Amino Acids

105.37

Weight (kDa)

9.43

Isoelectric Point (pI)

47.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	115 - 417	1.2e-61	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	115 - 398	1.2e-15	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57990
fragaria_vesca	FvH4_1g01010 FvH4_1g01010 FvH4_1g01010
malus_domestica	MD02G1008300.v1.1 MD15G1152500.v1.1
prunus_persica	Prupe.7G262200_v2.0.a1
pyrus_communis	pycom02g00720 pycom15g13710
rosa_chinensis	RchiOBHm_Chr2g0085751
rosa_laevigata	RLG00000015716
rosa_multiflora	Rmu_sc0009759.1_g000004 Rmu_sc0023131.1_g000003 Rmu_sc0033740.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155070
rosa_rugosa	Rorug01G0462900 Rorug01G0462900
rosa_samantha	Rh2AG012000 Rh2BG012600 Rh2CG013400 Rh2DG014400
rosa_wichuraiana	Rw2G001070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	206, 435
AccB1I	GGYRCC	1 cut(s)	1679
AccB7I	CCANNNNNTGG	2 cut(s)	1507, 1990
AccBSI	CCGCTC	1 cut(s)	177
AccII	CGCG	2 cut(s)	109, 574
AccIII	TCCGGA	3 cut(s)	254, 304, 1066
AclWI	GGATC	9 cut(s)	41, 54, 98, 296, 309, 773, 1395, 1798, 1907
AcoI	YGGCCR	5 cut(s)	3, 1132, 1498, 1981, 2132
AcsI	RAATTY	3 cut(s)	448, 1840, 1863
AcuI	CTGAAG	2 cut(s)	873, 2190
AdeI	CACNNNGTG	1 cut(s)	1507
AfaI	GTAC	4 cut(s)	705, 1238, 1254, 1327
AfiI	CCNNNNNNNGG	8 cut(s)	122, 176, 1471, 1507, 1836, 1990, 2639, 2781
AflII	CTTAAG	1 cut(s)	2158
AflIII	ACRYGT	2 cut(s)	9, 1239
AhdI	GACNNNNNGTC	2 cut(s)	1049, 2607
AjiI	CACGTC	2 cut(s)	10, 502
AjnI	CCWGG	3 cut(s)	210, 991, 2776
AjuI	GAANNNNNNNTTGG	2 cut(s)	1005, 1037
AloI	GAACNNNNNNTCC	2 cut(s)	2533, 2565
Alw21I	GWGCWC	4 cut(s)	312, 501, 758, 2384
Alw26I	GTCTC	4 cut(s)	152, 1036, 2612, 2664
AlwI	GGATC	9 cut(s)	41, 54, 98, 296, 309, 773, 1395, 1798, 1907
AlwNI	CAGNNNCTG	1 cut(s)	397
Aor13HI	TCCGGA	3 cut(s)	254, 304, 1066
AoxI	GGCC	8 cut(s)	3, 152, 208, 1132, 1498, 1981, 2132, 2783
ApeKI	GCWGC	4 cut(s)	52, 183, 419, 1225
ApoI	RAATTY	3 cut(s)	448, 1840, 1863
Asp700I	GAANNNNTTC	2 cut(s)	116, 1374
AspLEI	GCGC	1 cut(s)	109
AspS9I	GGNCC	5 cut(s)	1025, 1762, 2270, 2609, 2783
AsuC2I	CCSGG	2 cut(s)	171, 204
AsuHPI	GGTGA	4 cut(s)	1740, 2411, 2686, 2764
AsuII	TTCGAA	4 cut(s)	730, 1153, 1378, 2321
AsuNHI	GCTAGC	1 cut(s)	1118
AvaII	GGWCC	4 cut(s)	1025, 1762, 2270, 2609
BaeI	ACNNNNGTAYC	2 cut(s)	2831, 2864
BalI	TGGCCA	2 cut(s)	1500, 1983
BamHI	GGATCC	2 cut(s)	46, 301
BanI	GGYRCC	1 cut(s)	1679
BanII	GRGCYC	2 cut(s)	312, 1580
BbsI	GAAGAC	1 cut(s)	544
Bbv12I	GWGCWC	4 cut(s)	312, 501, 758, 2384
BbvI	GCAGC	4 cut(s)	64, 195, 406, 1237
BceAI	ACGGC	2 cut(s)	64, 154
BcgI	CGANNNNNNTGC	2 cut(s)	12, 46
BciT130I	CCWGG	3 cut(s)	212, 993, 2778
BciVI	GTATCC	1 cut(s)	2832
BclI	TGATCA	1 cut(s)	2263
BcnI	CCSGG	2 cut(s)	171, 204
BcoDI	GTCTC	4 cut(s)	152, 1036, 2612, 2664
BfaI	CTAG	9 cut(s)	681, 948, 1103, 1119, 1412, 1505, 1926, 1971, 2148
BfrI	CTTAAG	1 cut(s)	2158
BfuAI	ACCTGC	2 cut(s)	206, 435
BfuI	GTATCC	1 cut(s)	2832
BglII	AGATCT	1 cut(s)	711
BisI	GCNGC	7 cut(s)	53, 184, 208, 420, 944, 1226, 1630
BlpI	GCTNAGC	1 cut(s)	311
BlsI	GCNGC	7 cut(s)	54, 185, 209, 421, 945, 1227, 1631
Bme1390I	CCNGG	5 cut(s)	171, 204, 212, 993, 2778
Bme18I	GGWCC	4 cut(s)	1025, 1762, 2270, 2609
BmeRI	GACNNNNNGTC	2 cut(s)	1049, 2607
BmgBI	CACGTC	2 cut(s)	10, 502
BmgT120I	GGNCC	5 cut(s)	1025, 1762, 2270, 2609, 2783
BmiI	GGNNCC	5 cut(s)	48, 303, 1681, 1764, 2610
BmrFI	CCNGG	5 cut(s)	171, 204, 212, 993, 2778
BmsI	GCATC	9 cut(s)	83, 451, 592, 887, 1426, 1448, 1487, 1790, 2560
BmtI	GCTAGC	1 cut(s)	1122
BpiI	GAAGAC	1 cut(s)	544
BplI	GAGNNNNNCTC	2 cut(s)	2427, 2459
BpmI	CTGGAG	1 cut(s)	681
Bpu1102I	GCTNAGC	1 cut(s)	311
Bpu14I	TTCGAA	4 cut(s)	730, 1153, 1378, 2321
BpuEI	CTTGAG	1 cut(s)	1060
BpuMI	CCSGG	2 cut(s)	171, 204
BsaAI	YACGTR	1 cut(s)	1256
BsaI	GGTCTC	1 cut(s)	1036
BsaWI	WCCGGW	4 cut(s)	254, 304, 1066, 1829
BsaXI	ACNNNNNCTCC	4 cut(s)	325, 355, 2533, 2563
Bsc4I	CCNNNNNNNGG	8 cut(s)	122, 176, 1471, 1507, 1836, 1990, 2639, 2781
Bse1I	ACTGG	5 cut(s)	1168, 1642, 1681, 2612, 2867
Bse3DI	GCAATG	2 cut(s)	1705, 2580
BseAI	TCCGGA	3 cut(s)	254, 304, 1066
BseBI	CCWGG	3 cut(s)	212, 993, 2778
BseGI	GGATG	9 cut(s)	489, 871, 960, 1189, 1856, 2135, 2591, 2644, 2728
BseLI	CCNNNNNNNGG	8 cut(s)	122, 176, 1471, 1507, 1836, 1990, 2639, 2781
BseMI	GCAATG	2 cut(s)	1705, 2580
BseMII	CTCAG	8 cut(s)	147, 325, 399, 1823, 2274, 2397, 2618, 2669
BseNI	ACTGG	5 cut(s)	1168, 1642, 1681, 2612, 2867
BseRI	GAGGAG	1 cut(s)	83
BseXI	GCAGC	4 cut(s)	64, 195, 406, 1237
BseYI	CCCAGC	1 cut(s)	1835
BsgI	GTGCAG	1 cut(s)	2186
Bsh1236I	CGCG	2 cut(s)	109, 574
Bsh1285I	CGRYCG	1 cut(s)	32
BshFI	GGCC	8 cut(s)	5, 154, 210, 1134, 1500, 1983, 2134, 2785
BshNI	GGYRCC	1 cut(s)	1679
BsiEI	CGRYCG	1 cut(s)	32
BsiHKAI	GWGCWC	4 cut(s)	312, 501, 758, 2384
BslFI	GGGAC	2 cut(s)	1436, 1447
BslI	CCNNNNNNNGG	8 cut(s)	122, 176, 1471, 1507, 1836, 1990, 2639, 2781
BsmAI	GTCTC	4 cut(s)	152, 1036, 2612, 2664
BsmBI	CGTCTC	1 cut(s)	152
BsmFI	GGGAC	2 cut(s)	1436, 1447
BsnI	GGCC	8 cut(s)	5, 154, 210, 1134, 1500, 1983, 2134, 2785
Bso31I	GGTCTC	1 cut(s)	1036
Bsp119I	TTCGAA	4 cut(s)	730, 1153, 1378, 2321
Bsp1286I	GDGCHC	5 cut(s)	312, 501, 758, 1580, 2384
Bsp13I	TCCGGA	3 cut(s)	254, 304, 1066
Bsp1720I	GCTNAGC	1 cut(s)	311
Bsp19I	CCATGG	1 cut(s)	2395
BspANI	GGCC	8 cut(s)	5, 154, 210, 1134, 1500, 1983, 2134, 2785
BspCNI	CTCAG	8 cut(s)	148, 324, 400, 1822, 2275, 2396, 2617, 2668
BspEI	TCCGGA	3 cut(s)	254, 304, 1066
BspFNI	CGCG	2 cut(s)	109, 574
BspLI	GGNNCC	5 cut(s)	48, 303, 1681, 1764, 2610
BspMI	ACCTGC	2 cut(s)	206, 435
BspOI	GCTAGC	1 cut(s)	1122
BspPI	GGATC	9 cut(s)	41, 54, 98, 296, 309, 773, 1395, 1798, 1907
BspQI	GCTCTTC	1 cut(s)	2506
BspT104I	TTCGAA	4 cut(s)	730, 1153, 1378, 2321
BspT107I	GGYRCC	1 cut(s)	1679
BspTI	CTTAAG	1 cut(s)	2158
BspTNI	GGTCTC	1 cut(s)	1036
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	2 cut(s)	1705, 2580
BsrI	ACTGG	5 cut(s)	1168, 1642, 1681, 2612, 2867
BssT1I	CCWWGG	7 cut(s)	810, 1277, 1454, 2304, 2395, 2633, 2834
Bst2UI	CCWGG	3 cut(s)	212, 993, 2778
Bst4CI	ACNGT	6 cut(s)	861, 1219, 1330, 1756, 1990, 2461
Bst6I	CTCTTC	5 cut(s)	260, 689, 1423, 2318, 2506
BstAFI	CTTAAG	1 cut(s)	2158
BstBAI	YACGTR	1 cut(s)	1256
BstBI	TTCGAA	4 cut(s)	730, 1153, 1378, 2321
BstC8I	GCNNGC	7 cut(s)	440, 1120, 1396, 2072, 2123, 2466, 2763
BstDEI	CTNAG	9 cut(s)	156, 311, 408, 787, 1809, 2283, 2383, 2604, 2655
BstDSI	CCRYGG	1 cut(s)	2395
BstF5I	GGATG	9 cut(s)	489, 871, 960, 1189, 1856, 2135, 2591, 2644, 2728
BstFNI	CGCG	2 cut(s)	109, 574
BstHHI	GCGC	1 cut(s)	109
BstMAI	GTCTC	4 cut(s)	152, 1036, 2612, 2664
BstMCI	CGRYCG	1 cut(s)	32
BstNI	CCWGG	3 cut(s)	212, 993, 2778
BstNSI	RCATGY	2 cut(s)	1243, 2125
BstSCI	CCNGG	5 cut(s)	169, 202, 210, 991, 2776
BstUI	CGCG	2 cut(s)	109, 574
BstV1I	GCAGC	4 cut(s)	64, 195, 406, 1237
BstV2I	GAAGAC	1 cut(s)	544
BstX2I	RGATCY	6 cut(s)	46, 301, 711, 778, 1400, 1803
BstYI	RGATCY	6 cut(s)	46, 301, 711, 778, 1400, 1803
BsuI	GTATCC	1 cut(s)	2832
BsuRI	GGCC	8 cut(s)	5, 154, 210, 1134, 1500, 1983, 2134, 2785
BtgI	CCRYGG	1 cut(s)	2395
BtgZI	GCGATG	1 cut(s)	60
BtrI	CACGTC	2 cut(s)	10, 502
BtsCI	GGATG	9 cut(s)	489, 871, 960, 1189, 1856, 2135, 2591, 2644, 2728
BtsI	GCAGTG	3 cut(s)	148, 398, 758
BtsIMutI	CAGTG	9 cut(s)	148, 390, 398, 758, 893, 1060, 1995, 2466, 2619
BveI	ACCTGC	2 cut(s)	206, 435
Cac8I	GCNNGC	7 cut(s)	440, 1120, 1396, 2072, 2123, 2466, 2763
CaiI	CAGNNNCTG	1 cut(s)	397
CfoI	GCGC	1 cut(s)	109
Cfr13I	GGNCC	5 cut(s)	1025, 1762, 2270, 2609, 2783
CseI	GACGC	2 cut(s)	169, 1551
Csp6I	GTAC	4 cut(s)	704, 1237, 1253, 1326
CspCI	CAANNNNNGTGG	2 cut(s)	1644, 1679
CviAII	CATG	9 cut(s)	608, 616, 637, 1240, 1823, 2122, 2396, 2663, 2681
CviQI	GTAC	4 cut(s)	704, 1237, 1253, 1326
DdeI	CTNAG	9 cut(s)	156, 311, 408, 787, 1809, 2283, 2383, 2604, 2655
DraI	TTTAAA	1 cut(s)	969
DraIII	CACNNNGTG	1 cut(s)	1507
DriI	GACNNNNNGTC	2 cut(s)	1049, 2607
EaeI	YGGCCR	5 cut(s)	3, 1132, 1498, 1981, 2132
Eam1104I	CTCTTC	5 cut(s)	260, 689, 1423, 2318, 2506
Eam1105I	GACNNNNNGTC	2 cut(s)	1049, 2607
EarI	CTCTTC	5 cut(s)	260, 689, 1423, 2318, 2506
EciI	GGCGGA	1 cut(s)	80
Ecl136II	GAGCTC	1 cut(s)	310
Eco130I	CCWWGG	7 cut(s)	810, 1277, 1454, 2304, 2395, 2633, 2834
Eco24I	GRGCYC	2 cut(s)	312, 1580
Eco31I	GGTCTC	1 cut(s)	1036
Eco32I	GATATC	1 cut(s)	1746
Eco47I	GGWCC	4 cut(s)	1025, 1762, 2270, 2609
Eco53kI	GAGCTC	1 cut(s)	310
Eco57I	CTGAAG	2 cut(s)	873, 2190
EcoICRI	GAGCTC	1 cut(s)	310
EcoO109I	RGGNCCY	1 cut(s)	1762
EcoRI	GAATTC	2 cut(s)	448, 1863
EcoRII	CCWGG	3 cut(s)	210, 991, 2776
EcoRV	GATATC	1 cut(s)	1746
EcoT14I	CCWWGG	7 cut(s)	810, 1277, 1454, 2304, 2395, 2633, 2834
EcoT22I	ATGCAT	3 cut(s)	642, 1441, 2127
EcoT38I	GRGCYC	2 cut(s)	312, 1580
ErhI	CCWWGG	7 cut(s)	810, 1277, 1454, 2304, 2395, 2633, 2834
Esp3I	CGTCTC	1 cut(s)	152
FaeI	CATG	9 cut(s)	611, 619, 640, 1243, 1826, 2125, 2399, 2666, 2684
FalI	AAGNNNNNCTT	2 cut(s)	2219, 2251
FaqI	GGGAC	2 cut(s)	1436, 1447
FatI	CATG	9 cut(s)	607, 615, 636, 1239, 1822, 2121, 2395, 2662, 2680
FauI	CCCGC	1 cut(s)	1387
FauNDI	CATATG	1 cut(s)	985
FbaI	TGATCA	1 cut(s)	2263
Fnu4HI	GCNGC	7 cut(s)	53, 184, 208, 420, 944, 1226, 1630
FokI	GGATG	9 cut(s)	476, 878, 947, 1196, 1843, 2122, 2598, 2651, 2735
FriOI	GRGCYC	2 cut(s)	312, 1580
Fsp4HI	GCNGC	7 cut(s)	53, 184, 208, 420, 944, 1226, 1630
FspBI	CTAG	9 cut(s)	681, 948, 1103, 1119, 1412, 1505, 1926, 1971, 2148
GlaI	GCGC	1 cut(s)	108
GluI	GCNGC	7 cut(s)	53, 184, 208, 420, 944, 1226, 1630
GsaI	CCCAGC	1 cut(s)	1839
GsuI	CTGGAG	1 cut(s)	681
HaeIII	GGCC	8 cut(s)	5, 154, 210, 1134, 1500, 1983, 2134, 2785
HgaI	GACGC	2 cut(s)	169, 1551
HhaI	GCGC	1 cut(s)	109
Hin1II	CATG	9 cut(s)	611, 619, 640, 1243, 1826, 2125, 2399, 2666, 2684
Hin6I	GCGC	1 cut(s)	107
HinP1I	GCGC	1 cut(s)	107
HphI	GGTGA	4 cut(s)	1740, 2411, 2686, 2764
Hpy166II	GTNNAC	6 cut(s)	200, 622, 653, 706, 841, 2195
Hpy8I	GTNNAC	6 cut(s)	200, 622, 653, 706, 841, 2195
Hpy99I	CGWCG	1 cut(s)	11
HpyAV	CCTTC	9 cut(s)	737, 1064, 1465, 1525, 1753, 1771, 1960, 2584, 2746
HpyCH4III	ACNGT	6 cut(s)	861, 1219, 1330, 1756, 1990, 2461
HpyCH4IV	ACGT	5 cut(s)	9, 501, 1031, 1255, 1960
HpyF3I	CTNAG	9 cut(s)	156, 311, 408, 787, 1809, 2283, 2383, 2604, 2655
HpySE526I	ACGT	5 cut(s)	9, 501, 1031, 1255, 1960
Hsp92II	CATG	9 cut(s)	611, 619, 640, 1243, 1826, 2125, 2399, 2666, 2684
HspAI	GCGC	1 cut(s)	107
Kpn2I	TCCGGA	3 cut(s)	254, 304, 1066
Ksp22I	TGATCA	1 cut(s)	2263
LguI	GCTCTTC	1 cut(s)	2506
LmnI	GCTCC	6 cut(s)	174, 257, 307, 761, 1058, 2065
Lsp1109I	GCAGC	4 cut(s)	64, 195, 406, 1237
LweI	GCATC	9 cut(s)	83, 451, 592, 887, 1426, 1448, 1487, 1790, 2560
MaeI	CTAG	9 cut(s)	681, 948, 1103, 1119, 1412, 1505, 1926, 1971, 2148
MaeII	ACGT	5 cut(s)	9, 501, 1031, 1255, 1960
MaeIII	GTNAC	4 cut(s)	143, 269, 2032, 2509
MbiI	CCGCTC	1 cut(s)	177
MfeI	CAATTG	3 cut(s)	2557, 2622, 2822
MflI	RGATCY	6 cut(s)	46, 301, 711, 778, 1400, 1803
MhlI	GDGCHC	5 cut(s)	312, 501, 758, 1580, 2384
MlsI	TGGCCA	2 cut(s)	1500, 1983
MluNI	TGGCCA	2 cut(s)	1500, 1983
MlyI	GAGTC	1 cut(s)	2596
MmeI	TCCRAC	3 cut(s)	258, 843, 1014
Mox20I	TGGCCA	2 cut(s)	1500, 1983
Mph1103I	ATGCAT	3 cut(s)	642, 1441, 2127
MroI	TCCGGA	3 cut(s)	254, 304, 1066
MroXI	GAANNNNTTC	2 cut(s)	116, 1374
MscI	TGGCCA	2 cut(s)	1500, 1983
MseI	TTAA	9 cut(s)	129, 165, 794, 968, 1005, 1485, 2159, 2214, 2418
Msp20I	TGGCCA	2 cut(s)	1500, 1983
MspCI	CTTAAG	1 cut(s)	2158
MspR9I	CCNGG	5 cut(s)	171, 204, 212, 993, 2778
MunI	CAATTG	3 cut(s)	2557, 2622, 2822
MvaI	CCWGG	3 cut(s)	212, 993, 2778
MvnI	CGCG	2 cut(s)	109, 574
NciI	CCSGG	2 cut(s)	171, 204
NcoI	CCATGG	1 cut(s)	2395
NdeI	CATATG	1 cut(s)	985
NheI	GCTAGC	1 cut(s)	1118
NlaIII	CATG	9 cut(s)	611, 619, 640, 1243, 1826, 2125, 2399, 2666, 2684
NlaIV	GGNNCC	5 cut(s)	48, 303, 1681, 1764, 2610
NmuCI	GTSAC	3 cut(s)	143, 269, 2032
NsiI	ATGCAT	3 cut(s)	642, 1441, 2127
NspI	RCATGY	2 cut(s)	1243, 2125
NspV	TTCGAA	4 cut(s)	730, 1153, 1378, 2321
PaeI	GCATGC	1 cut(s)	2125
PciI	ACATGT	1 cut(s)	1239
PciSI	GCTCTTC	1 cut(s)	2506
PcsI	WCGNNNNNNNCGW	1 cut(s)	83
PdmI	GAANNNNTTC	2 cut(s)	116, 1374
PflMI	CCANNNNNTGG	2 cut(s)	1507, 1990
PkrI	GCNGC	7 cut(s)	54, 185, 209, 421, 945, 1227, 1631
Ple19I	CGATCG	1 cut(s)	32
PleI	GAGTC	1 cut(s)	2596
PpsI	GAGTC	1 cut(s)	2596
Ppu21I	YACGTR	1 cut(s)	1256
PpuMI	RGGWCCY	1 cut(s)	1762
PscI	ACATGT	1 cut(s)	1239
Psp124BI	GAGCTC	1 cut(s)	312
Psp5II	RGGWCCY	1 cut(s)	1762
Psp6I	CCWGG	3 cut(s)	210, 991, 2776
PspFI	CCCAGC	1 cut(s)	1835
PspGI	CCWGG	3 cut(s)	210, 991, 2776
PspN4I	GGNNCC	5 cut(s)	48, 303, 1681, 1764, 2610
PspPI	GGNCC	5 cut(s)	1025, 1762, 2270, 2609, 2783
PspPPI	RGGWCCY	1 cut(s)	1762
PsrI	GAACNNNNNNTAC	4 cut(s)	1188, 1220, 1229, 1261
PstNI	CAGNNNCTG	1 cut(s)	397
PsuI	RGATCY	6 cut(s)	46, 301, 711, 778, 1400, 1803
PvuI	CGATCG	1 cut(s)	32
RsaI	GTAC	4 cut(s)	705, 1238, 1254, 1327
RsaNI	GTAC	4 cut(s)	704, 1237, 1253, 1326
SacI	GAGCTC	1 cut(s)	312
SapI	GCTCTTC	1 cut(s)	2506
SaqAI	TTAA	9 cut(s)	129, 165, 794, 968, 1005, 1485, 2159, 2214, 2418
SatI	GCNGC	7 cut(s)	53, 184, 208, 420, 944, 1226, 1630
Sau96I	GGNCC	5 cut(s)	1025, 1762, 2270, 2609, 2783
SchI	GAGTC	1 cut(s)	2596
ScrFI	CCNGG	5 cut(s)	171, 204, 212, 993, 2778
SduI	GDGCHC	5 cut(s)	312, 501, 758, 1580, 2384
SfaNI	GCATC	9 cut(s)	83, 451, 592, 887, 1426, 1448, 1487, 1790, 2560
SfuI	TTCGAA	4 cut(s)	730, 1153, 1378, 2321
SinI	GGWCC	4 cut(s)	1025, 1762, 2270, 2609
SmlI	CTYRAG	2 cut(s)	1039, 2158
SmoI	CTYRAG	2 cut(s)	1039, 2158
SphI	GCATGC	1 cut(s)	2125
SspI	AATATT	1 cut(s)	1270
SspMI	CTAG	9 cut(s)	681, 948, 1103, 1119, 1412, 1505, 1926, 1971, 2148
SstI	GAGCTC	1 cut(s)	312
StyD4I	CCNGG	5 cut(s)	169, 202, 210, 991, 2776
StyI	CCWWGG	7 cut(s)	810, 1277, 1454, 2304, 2395, 2633, 2834
TaaI	ACNGT	6 cut(s)	861, 1219, 1330, 1756, 1990, 2461
TaiI	ACGT	5 cut(s)	12, 504, 1034, 1258, 1963
TauI	GCSGC	3 cut(s)	210, 946, 1632
Tru1I	TTAA	9 cut(s)	129, 165, 794, 968, 1005, 1485, 2159, 2214, 2418
Tru9I	TTAA	9 cut(s)	129, 165, 794, 968, 1005, 1485, 2159, 2214, 2418
TscAI	CASTG	9 cut(s)	148, 390, 398, 758, 893, 1060, 1995, 2466, 2619
TseFI	GTSAC	3 cut(s)	143, 269, 2032
TseI	GCWGC	4 cut(s)	52, 183, 419, 1225
Tsp45I	GTSAC	3 cut(s)	143, 269, 2032
TspRI	CASTG	9 cut(s)	148, 390, 398, 758, 893, 1060, 1995, 2466, 2619
Van91I	CCANNNNNTGG	2 cut(s)	1507, 1990
Vha464I	CTTAAG	1 cut(s)	2158
VpaK11BI	GGWCC	4 cut(s)	1025, 1762, 2270, 2609
XapI	RAATTY	3 cut(s)	448, 1840, 1863
XbaI	TCTAGA	1 cut(s)	1925
XceI	RCATGY	2 cut(s)	1243, 2125
XmnI	GAANNNNTTC	2 cut(s)	116, 1374
XspI	CTAG	9 cut(s)	681, 948, 1103, 1119, 1412, 1505, 1926, 1971, 2148
Zsp2I	ATGCAT	3 cut(s)	642, 1441, 2127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.