Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0033740.1

Orthogroup ID

OG0009301

Physical Location & Seq

Genomic Coordinates Reverse (-)

8201 .. 13371

Gene Structure 5171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0033740.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2868 bp

atggccgacgtgttcaatccggcaatccgatcgggtcagagttcggatccgcagctcaaatcggcggaggaggcctcgccgtttccgaggatcgagtttcatctggcgcggaagccattcaagggctttaacaatgacggcagtgacttccggccggagacgcttaatccggggagcggtggcagctcggattcgcgtaaacccggccccccgggaggtcagggtcagtcgggttcgggttccggagcgaagaagagtgacgggtcggagtttttggagaacgggtgggatccggagctcagctttcccatcacatttcggagaattggtgctggtttgataaatatggggaatacttgttatctcaattcagtgttgcagtgcctgacatataccgagcctttagctgcatacctgcaaagtggcaggcatcggaattcttgtcatataaaaaatgggttttgtgctttatgtgccatccaagaacacgtcagtcttgctctacaatcaaccaagagcattttgccaaaggctcttgtcttcaatctacaacgcatatcgcggaattttaggaagtccagacaggaagatgcacatgaatacatggtgaacttgctggaatccatgcataaatgttgtttaccatctggagtgccaagtgaatcccctagtgcctatgagaagagtttggtacacaagatctttggtggtcgccttcgaagtcgggtcaaatgtttgcagtgctcctattgctctgacaagttagatccattcttagatttaagtcttgaaatagccaaggcaaactctttgaataaagcacttgtgaactttactgctgaagaacagttggatggtggggaaaggcaatatcagtgccaaagatgcaatcagaaagttcgagctatgaaacagatgaccattcacaagccgcctagtgttctgtccatccatttaaagcggtttcgtgcatatgaccctggacaaaaaattaacaaagaagttcagtttggtcctacgttggacttgagaccttttgtcagtggagcatatccggaaggagatttgaaatatactctttatggggttctagttcattgtggggctagcacctattccggccattattattgctttgttcgaacatcaactggcatatggcactctctggatgacaacaatgtaaggcaagttcgtgagatgactgttttgcagcaaaaggcttacatgttgttctatgtacgtgatagaagaaatattattccaaggaagcctgctgatgttgctcaaaaggagtatttcaaacctaatggtactgtaaataaaattactcctactgacaaccatttgtcgaaagaacctattcgaaaaattgcagttgcgggcagatcaaatgatctagcctcttctgttgcacaaaaagatgcatcagctattgtcccaagggtgtcccatttgaaggaagcatcagttaatcaaaataatggccacatagtggcacaaaatatggtgcgtaagaaggaagccatttcagaattgtctttgaaagcatcattatcagagggctcattgggaggattaggagaaaatatgccaccatctactctgcttccaagccgcaaaactggcacttctgattctgcaagtgctgtggcttcaacaactggtgccaaactaaatgactgcaatgagaaagcaagttcaaatgataatgatagggtttcaattatgatatcacctactgtgaaggaccctgaaatcttgaaggcatctaagcctgttcaagatgagatccctcagaataagaatcatgcttccggtgctgggaatttgagtgtggcttcatccagaattcctaacggtttaacattggagaagctgaatcctgaaaagccatctgatccaccaagctctagaatcagtcaggctggaagttttaccaatgaacttgagaaggctagtgattgtggccagacagtggtagtttctgattctgcaaaattggctggctcatcagttgtgacaaatagatcattagatttggaagctcctgaccgcaagcaccctaagggattgaaaaagaagcacataaagtgtaaggtggtaggcatgcatttccggccattcttgctttctagggcagtcttaagtgtgcggaataagaagaagcacaaaaggagtaaacacccgacttcagattgtaagagccatagtaagaaatacttggtagaaaattattgttcttcatctgatcaaggaccatctacatctgagaaaacccagaccgattccttggtttctgtctgttcgaagagaaagagaaacaaatctggcttgaaaacggatgaagatggaacttctaataagtgctcactgaatccccgtggtgattcttcgatggatattaaagatgtagagtttagagagagcctcaatcagaatggaacagtgcttgcaagtgataaacaacaacaaaatggttttggctcttcctctgttacattggaaaacaaaagggtgtcgagaggaactgatactccacacaattgtaaaagtgatgcaatgcaaaatggatggaagggcgtgctgactcagggtccagcggagacaattgttgcaccttgggatggaatagaattgcctcagtctcatgttgtagaaccaagccatgcacagagtatcaccatcggttatgtaggagatgattgggatgaagaatatgatcggggaaagagaaagaaggtaaggcaagcaaaactcacccctggtgggccaaatcctttccaaatacttgcaaacaagaaagcacaattgaagcaaccaaggatacaaaggtttgattctggaaatcgaccagtcaggatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

955

Amino Acids

104.88

Weight (kDa)

9.44

Isoelectric Point (pI)

48.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57990
fragaria_vesca	FvH4_1g01010 FvH4_1g01010 FvH4_1g01010
malus_domestica	MD02G1008300.v1.1 MD15G1152500.v1.1
prunus_persica	Prupe.7G262200_v2.0.a1
pyrus_communis	pycom02g00720 pycom15g13710
rosa_chinensis	RchiOBHm_Chr2g0085751
rosa_laevigata	RLG00000015716
rosa_multiflora	Rmu_sc0009759.1_g000004 Rmu_sc0023131.1_g000003 Rmu_sc0033740.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155070
rosa_rugosa	Rorug01G0462900 Rorug01G0462900
rosa_samantha	Rh2AG012000 Rh2BG012600 Rh2CG013400 Rh2DG014400
rosa_wichuraiana	Rw2G001070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	423
AccB1I	GGYRCC	1 cut(s)	1667
AccB7I	CCANNNNNTGG	2 cut(s)	1495, 1978
AccBSI	CCGCTC	1 cut(s)	177
AccII	CGCG	3 cut(s)	109, 196, 562
AccIII	TCCGGA	3 cut(s)	242, 292, 1054
AclWI	GGATC	8 cut(s)	41, 54, 98, 284, 297, 761, 1786, 1895
AcoI	YGGCCR	6 cut(s)	3, 152, 1120, 1486, 1969, 2120
AcsI	RAATTY	4 cut(s)	436, 565, 1828, 1851
AcuI	CTGAAG	2 cut(s)	861, 2178
AdeI	CACNNNGTG	1 cut(s)	1495
AfaI	GTAC	3 cut(s)	693, 1242, 1315
AfiI	CCNNNNNNNGG	9 cut(s)	122, 176, 215, 1459, 1495, 1824, 1978, 2627, 2769
AflII	CTTAAG	1 cut(s)	2146
AflIII	ACRYGT	3 cut(s)	9, 487, 1227
AhdI	GACNNNNNGTC	2 cut(s)	1037, 2595
AjiI	CACGTC	2 cut(s)	10, 490
AjnI	CCWGG	2 cut(s)	979, 2764
AjuI	GAANNNNNNNTTGG	2 cut(s)	993, 1025
AloI	GAACNNNNNNTCC	2 cut(s)	2521, 2553
Alw21I	GWGCWC	3 cut(s)	300, 746, 2372
Alw26I	GTCTC	4 cut(s)	152, 1024, 2600, 2652
AlwI	GGATC	8 cut(s)	41, 54, 98, 284, 297, 761, 1786, 1895
AlwNI	CAGNNNCTG	1 cut(s)	385
Ama87I	CYCGRG	1 cut(s)	211
Aor13HI	TCCGGA	3 cut(s)	242, 292, 1054
AoxI	GGCC	9 cut(s)	3, 72, 152, 205, 1120, 1486, 1969, 2120, 2771
ApeKI	GCWGC	4 cut(s)	52, 183, 407, 1213
ApoI	RAATTY	4 cut(s)	436, 565, 1828, 1851
Asp700I	GAANNNNTTC	2 cut(s)	116, 1362
AspLEI	GCGC	1 cut(s)	109
AspS9I	GGNCC	6 cut(s)	206, 1013, 1750, 2258, 2597, 2771
AsuC2I	CCSGG	4 cut(s)	171, 204, 212, 213
AsuHPI	GGTGA	5 cut(s)	619, 1728, 2399, 2674, 2752
AsuII	TTCGAA	4 cut(s)	718, 1141, 1366, 2309
AsuNHI	GCTAGC	1 cut(s)	1106
AvaI	CYCGRG	1 cut(s)	211
AvaII	GGWCC	4 cut(s)	1013, 1750, 2258, 2597
AxyI	CCTNAGG	1 cut(s)	2067
BaeI	ACNNNNGTAYC	2 cut(s)	2819, 2852
BalI	TGGCCA	2 cut(s)	1488, 1971
BamHI	GGATCC	2 cut(s)	46, 289
BanI	GGYRCC	1 cut(s)	1667
BanII	GRGCYC	2 cut(s)	300, 1568
BbsI	GAAGAC	1 cut(s)	532
Bbv12I	GWGCWC	3 cut(s)	300, 746, 2372
BbvI	GCAGC	4 cut(s)	64, 195, 394, 1225
BceAI	ACGGC	2 cut(s)	64, 154
BcgI	CGANNNNNNTGC	2 cut(s)	12, 46
BciT130I	CCWGG	2 cut(s)	981, 2766
BciVI	GTATCC	1 cut(s)	2820
BclI	TGATCA	1 cut(s)	2251
BcnI	CCSGG	4 cut(s)	171, 204, 212, 213
BcoDI	GTCTC	4 cut(s)	152, 1024, 2600, 2652
BfaI	CTAG	8 cut(s)	669, 936, 1091, 1107, 1400, 1914, 1959, 2136
BfrI	CTTAAG	1 cut(s)	2146
BfuAI	ACCTGC	1 cut(s)	423
BfuI	GTATCC	1 cut(s)	2820
BglII	AGATCT	1 cut(s)	699
BisI	GCNGC	6 cut(s)	53, 184, 408, 932, 1214, 1618
BlpI	GCTNAGC	1 cut(s)	299
BlsI	GCNGC	6 cut(s)	54, 185, 409, 933, 1215, 1619
Bme1390I	CCNGG	6 cut(s)	171, 204, 212, 213, 981, 2766
Bme18I	GGWCC	4 cut(s)	1013, 1750, 2258, 2597
BmeRI	GACNNNNNGTC	2 cut(s)	1037, 2595
BmeT110I	CYCGRG	1 cut(s)	211
BmgBI	CACGTC	2 cut(s)	10, 490
BmgT120I	GGNCC	6 cut(s)	206, 1013, 1750, 2258, 2597, 2771
BmiI	GGNNCC	7 cut(s)	48, 208, 241, 291, 1669, 1752, 2598
BmrFI	CCNGG	6 cut(s)	171, 204, 212, 213, 981, 2766
BmsI	GCATC	9 cut(s)	439, 580, 875, 1414, 1436, 1475, 1559, 1778, 2548
BmtI	GCTAGC	1 cut(s)	1110
BpiI	GAAGAC	1 cut(s)	532
BplI	GAGNNNNNCTC	4 cut(s)	59, 91, 2415, 2447
BpmI	CTGGAG	1 cut(s)	669
Bpu1102I	GCTNAGC	1 cut(s)	299
Bpu14I	TTCGAA	4 cut(s)	718, 1141, 1366, 2309
BpuEI	CTTGAG	2 cut(s)	1048, 1970
BpuMI	CCSGG	4 cut(s)	171, 204, 212, 213
BsaAI	YACGTR	1 cut(s)	1244
BsaI	GGTCTC	1 cut(s)	1024
BsaWI	WCCGGW	4 cut(s)	242, 292, 1054, 1817
BsaXI	ACNNNNNCTCC	6 cut(s)	269, 299, 313, 343, 2521, 2551
Bsc4I	CCNNNNNNNGG	9 cut(s)	122, 176, 215, 1459, 1495, 1824, 1978, 2627, 2769
Bse1I	ACTGG	4 cut(s)	1156, 1630, 1669, 2855
Bse21I	CCTNAGG	1 cut(s)	2067
Bse3DI	GCAATG	2 cut(s)	1693, 2568
BseAI	TCCGGA	3 cut(s)	242, 292, 1054
BseBI	CCWGG	2 cut(s)	981, 2766
BseGI	GGATG	9 cut(s)	477, 859, 948, 1177, 1844, 2350, 2579, 2632, 2716
BseLI	CCNNNNNNNGG	9 cut(s)	122, 176, 215, 1459, 1495, 1824, 1978, 2627, 2769
BseMI	GCAATG	2 cut(s)	1693, 2568
BseMII	CTCAG	5 cut(s)	313, 1811, 2262, 2606, 2657
BseNI	ACTGG	4 cut(s)	1156, 1630, 1669, 2855
BseRI	GAGGAG	1 cut(s)	83
BseX3I	CGGCCG	1 cut(s)	152
BseXI	GCAGC	4 cut(s)	64, 195, 394, 1225
BseYI	CCCAGC	1 cut(s)	1823
Bsh1236I	CGCG	3 cut(s)	109, 196, 562
Bsh1285I	CGRYCG	2 cut(s)	32, 155
BshFI	GGCC	9 cut(s)	5, 74, 154, 207, 1122, 1488, 1971, 2122, 2773
BshNI	GGYRCC	1 cut(s)	1667
BsiEI	CGRYCG	2 cut(s)	32, 155
BsiHKAI	GWGCWC	3 cut(s)	300, 746, 2372
BsiHKCI	CYCGRG	1 cut(s)	211
BslFI	GGGAC	2 cut(s)	1424, 1435
BslI	CCNNNNNNNGG	9 cut(s)	122, 176, 215, 1459, 1495, 1824, 1978, 2627, 2769
BsmAI	GTCTC	4 cut(s)	152, 1024, 2600, 2652
BsmBI	CGTCTC	1 cut(s)	152
BsmFI	GGGAC	2 cut(s)	1424, 1435
BsnI	GGCC	9 cut(s)	5, 74, 154, 207, 1122, 1488, 1971, 2122, 2773
Bso31I	GGTCTC	1 cut(s)	1024
BsoBI	CYCGRG	1 cut(s)	211
Bsp119I	TTCGAA	4 cut(s)	718, 1141, 1366, 2309
Bsp1286I	GDGCHC	4 cut(s)	300, 746, 1568, 2372
Bsp13I	TCCGGA	3 cut(s)	242, 292, 1054
Bsp1720I	GCTNAGC	1 cut(s)	299
BspANI	GGCC	9 cut(s)	5, 74, 154, 207, 1122, 1488, 1971, 2122, 2773
BspCNI	CTCAG	5 cut(s)	312, 1810, 2263, 2605, 2656
BspEI	TCCGGA	3 cut(s)	242, 292, 1054
BspFNI	CGCG	3 cut(s)	109, 196, 562
BspLI	GGNNCC	7 cut(s)	48, 208, 241, 291, 1669, 1752, 2598
BspMI	ACCTGC	1 cut(s)	423
BspOI	GCTAGC	1 cut(s)	1110
BspPI	GGATC	8 cut(s)	41, 54, 98, 284, 297, 761, 1786, 1895
BspQI	GCTCTTC	1 cut(s)	2494
BspT104I	TTCGAA	4 cut(s)	718, 1141, 1366, 2309
BspT107I	GGYRCC	1 cut(s)	1667
BspTI	CTTAAG	1 cut(s)	2146
BspTNI	GGTCTC	1 cut(s)	1024
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	2 cut(s)	1693, 2568
BsrI	ACTGG	4 cut(s)	1156, 1630, 1669, 2855
BssT1I	CCWWGG	6 cut(s)	798, 1265, 1442, 2292, 2621, 2822
Bst2UI	CCWGG	2 cut(s)	981, 2766
Bst4CI	ACNGT	7 cut(s)	849, 1207, 1318, 1744, 1862, 1978, 2449
Bst6I	CTCTTC	5 cut(s)	248, 677, 1411, 2306, 2494
BstAFI	CTTAAG	1 cut(s)	2146
BstBAI	YACGTR	1 cut(s)	1244
BstBI	TTCGAA	4 cut(s)	718, 1141, 1366, 2309
BstDEI	CTNAG	8 cut(s)	299, 775, 1773, 1797, 2067, 2271, 2592, 2643
BstDSI	CCRYGG	1 cut(s)	2383
BstF5I	GGATG	9 cut(s)	477, 859, 948, 1177, 1844, 2350, 2579, 2632, 2716
BstFNI	CGCG	3 cut(s)	109, 196, 562
BstHHI	GCGC	1 cut(s)	109
BstMAI	GTCTC	4 cut(s)	152, 1024, 2600, 2652
BstMCI	CGRYCG	2 cut(s)	32, 155
BstNI	CCWGG	2 cut(s)	981, 2766
BstNSI	RCATGY	2 cut(s)	1231, 2113
BstSCI	CCNGG	6 cut(s)	169, 202, 210, 211, 979, 2764
BstUI	CGCG	3 cut(s)	109, 196, 562
BstV1I	GCAGC	4 cut(s)	64, 195, 394, 1225
BstV2I	GAAGAC	1 cut(s)	532
BstX2I	RGATCY	5 cut(s)	46, 289, 699, 766, 1791
BstYI	RGATCY	5 cut(s)	46, 289, 699, 766, 1791
BstZI	CGGCCG	1 cut(s)	152
Bsu36I	CCTNAGG	1 cut(s)	2067
BsuI	GTATCC	1 cut(s)	2820
BsuRI	GGCC	9 cut(s)	5, 74, 154, 207, 1122, 1488, 1971, 2122, 2773
BtgI	CCRYGG	1 cut(s)	2383
BtrI	CACGTC	2 cut(s)	10, 490
BtsCI	GGATG	9 cut(s)	477, 859, 948, 1177, 1844, 2350, 2579, 2632, 2716
BtsI	GCAGTG	3 cut(s)	148, 386, 746
BtsIMutI	CAGTG	9 cut(s)	148, 378, 386, 746, 881, 1048, 1983, 2372, 2454
BveI	ACCTGC	1 cut(s)	423
CaiI	CAGNNNCTG	1 cut(s)	385
CfoI	GCGC	1 cut(s)	109
Cfr13I	GGNCC	6 cut(s)	206, 1013, 1750, 2258, 2597, 2771
Cfr9I	CCCGGG	1 cut(s)	211
CseI	GACGC	1 cut(s)	169
Csp6I	GTAC	3 cut(s)	692, 1241, 1314
CspCI	CAANNNNNGTGG	2 cut(s)	1632, 1667
CviAII	CATG	8 cut(s)	596, 604, 625, 1228, 1811, 2110, 2651, 2669
CviQI	GTAC	3 cut(s)	692, 1241, 1314
DdeI	CTNAG	8 cut(s)	299, 775, 1773, 1797, 2067, 2271, 2592, 2643
DraI	TTTAAA	1 cut(s)	957
DraIII	CACNNNGTG	1 cut(s)	1495
DriI	GACNNNNNGTC	2 cut(s)	1037, 2595
EaeI	YGGCCR	6 cut(s)	3, 152, 1120, 1486, 1969, 2120
EagI	CGGCCG	1 cut(s)	152
Eam1104I	CTCTTC	5 cut(s)	248, 677, 1411, 2306, 2494
Eam1105I	GACNNNNNGTC	2 cut(s)	1037, 2595
EarI	CTCTTC	5 cut(s)	248, 677, 1411, 2306, 2494
EciI	GGCGGA	1 cut(s)	80
Ecl136II	GAGCTC	1 cut(s)	298
EclXI	CGGCCG	1 cut(s)	152
Eco130I	CCWWGG	6 cut(s)	798, 1265, 1442, 2292, 2621, 2822
Eco147I	AGGCCT	1 cut(s)	74
Eco24I	GRGCYC	2 cut(s)	300, 1568
Eco31I	GGTCTC	1 cut(s)	1024
Eco32I	GATATC	1 cut(s)	1734
Eco47I	GGWCC	4 cut(s)	1013, 1750, 2258, 2597
Eco52I	CGGCCG	1 cut(s)	152
Eco53kI	GAGCTC	1 cut(s)	298
Eco57I	CTGAAG	2 cut(s)	861, 2178
Eco81I	CCTNAGG	1 cut(s)	2067
Eco88I	CYCGRG	1 cut(s)	211
EcoICRI	GAGCTC	1 cut(s)	298
EcoO109I	RGGNCCY	1 cut(s)	1750
EcoRI	GAATTC	2 cut(s)	436, 1851
EcoRII	CCWGG	2 cut(s)	979, 2764
EcoRV	GATATC	1 cut(s)	1734
EcoT14I	CCWWGG	6 cut(s)	798, 1265, 1442, 2292, 2621, 2822
EcoT22I	ATGCAT	3 cut(s)	630, 1429, 2115
EcoT38I	GRGCYC	2 cut(s)	300, 1568
ErhI	CCWWGG	6 cut(s)	798, 1265, 1442, 2292, 2621, 2822
Esp3I	CGTCTC	1 cut(s)	152
FaeI	CATG	8 cut(s)	599, 607, 628, 1231, 1814, 2113, 2654, 2672
FalI	AAGNNNNNCTT	2 cut(s)	2207, 2239
FaqI	GGGAC	2 cut(s)	1424, 1435
FatI	CATG	8 cut(s)	595, 603, 624, 1227, 1810, 2109, 2650, 2668
FauI	CCCGC	1 cut(s)	1375
FauNDI	CATATG	2 cut(s)	973, 1157
FbaI	TGATCA	1 cut(s)	2251
Fnu4HI	GCNGC	6 cut(s)	53, 184, 408, 932, 1214, 1618
FokI	GGATG	9 cut(s)	464, 866, 935, 1184, 1831, 2357, 2586, 2639, 2723
FriOI	GRGCYC	2 cut(s)	300, 1568
Fsp4HI	GCNGC	6 cut(s)	53, 184, 408, 932, 1214, 1618
FspBI	CTAG	8 cut(s)	669, 936, 1091, 1107, 1400, 1914, 1959, 2136
GlaI	GCGC	1 cut(s)	108
GluI	GCNGC	6 cut(s)	53, 184, 408, 932, 1214, 1618
GsaI	CCCAGC	1 cut(s)	1827
GsuI	CTGGAG	1 cut(s)	669
HaeIII	GGCC	9 cut(s)	5, 74, 154, 207, 1122, 1488, 1971, 2122, 2773
HgaI	GACGC	1 cut(s)	169
HhaI	GCGC	1 cut(s)	109
Hin1II	CATG	8 cut(s)	599, 607, 628, 1231, 1814, 2113, 2654, 2672
Hin6I	GCGC	1 cut(s)	107
HinP1I	GCGC	1 cut(s)	107
HphI	GGTGA	5 cut(s)	619, 1728, 2399, 2674, 2752
Hpy166II	GTNNAC	6 cut(s)	200, 610, 641, 694, 829, 2183
Hpy8I	GTNNAC	6 cut(s)	200, 610, 641, 694, 829, 2183
Hpy99I	CGWCG	1 cut(s)	11
HpyAV	CCTTC	9 cut(s)	725, 1052, 1453, 1513, 1741, 1759, 1948, 2572, 2734
HpyCH4III	ACNGT	7 cut(s)	849, 1207, 1318, 1744, 1862, 1978, 2449
HpyCH4IV	ACGT	4 cut(s)	9, 489, 1019, 1243
HpyF3I	CTNAG	8 cut(s)	299, 775, 1773, 1797, 2067, 2271, 2592, 2643
HpySE526I	ACGT	4 cut(s)	9, 489, 1019, 1243
Hsp92II	CATG	8 cut(s)	599, 607, 628, 1231, 1814, 2113, 2654, 2672
HspAI	GCGC	1 cut(s)	107
Kpn2I	TCCGGA	3 cut(s)	242, 292, 1054
Ksp22I	TGATCA	1 cut(s)	2251
LguI	GCTCTTC	1 cut(s)	2494
LmnI	GCTCC	6 cut(s)	174, 245, 295, 749, 1046, 2053
Lsp1109I	GCAGC	4 cut(s)	64, 195, 394, 1225
LweI	GCATC	9 cut(s)	439, 580, 875, 1414, 1436, 1475, 1559, 1778, 2548
MaeI	CTAG	8 cut(s)	669, 936, 1091, 1107, 1400, 1914, 1959, 2136
MaeII	ACGT	4 cut(s)	9, 489, 1019, 1243
MaeIII	GTNAC	4 cut(s)	143, 257, 2020, 2497
MbiI	CCGCTC	1 cut(s)	177
MfeI	CAATTG	3 cut(s)	2545, 2610, 2810
MflI	RGATCY	5 cut(s)	46, 289, 699, 766, 1791
MhlI	GDGCHC	4 cut(s)	300, 746, 1568, 2372
MlsI	TGGCCA	2 cut(s)	1488, 1971
MluNI	TGGCCA	2 cut(s)	1488, 1971
MlyI	GAGTC	1 cut(s)	2584
MmeI	TCCRAC	3 cut(s)	246, 831, 1002
Mox20I	TGGCCA	2 cut(s)	1488, 1971
Mph1103I	ATGCAT	3 cut(s)	630, 1429, 2115
MroI	TCCGGA	3 cut(s)	242, 292, 1054
MroXI	GAANNNNTTC	2 cut(s)	116, 1362
MscI	TGGCCA	2 cut(s)	1488, 1971
MseI	TTAA	9 cut(s)	129, 165, 782, 956, 993, 1473, 1865, 2147, 2406
Msp20I	TGGCCA	2 cut(s)	1488, 1971
MspA1I	CMGCKG	1 cut(s)	2603
MspCI	CTTAAG	1 cut(s)	2146
MspR9I	CCNGG	6 cut(s)	171, 204, 212, 213, 981, 2766
MunI	CAATTG	3 cut(s)	2545, 2610, 2810
MvaI	CCWGG	2 cut(s)	981, 2766
MvnI	CGCG	3 cut(s)	109, 196, 562
NciI	CCSGG	4 cut(s)	171, 204, 212, 213
NdeI	CATATG	2 cut(s)	973, 1157
NheI	GCTAGC	1 cut(s)	1106
NlaIII	CATG	8 cut(s)	599, 607, 628, 1231, 1814, 2113, 2654, 2672
NlaIV	GGNNCC	7 cut(s)	48, 208, 241, 291, 1669, 1752, 2598
NmuCI	GTSAC	3 cut(s)	143, 257, 2020
NsiI	ATGCAT	3 cut(s)	630, 1429, 2115
NspI	RCATGY	2 cut(s)	1231, 2113
NspV	TTCGAA	4 cut(s)	718, 1141, 1366, 2309
PaeI	GCATGC	1 cut(s)	2113
PceI	AGGCCT	1 cut(s)	74
PciI	ACATGT	1 cut(s)	1227
PciSI	GCTCTTC	1 cut(s)	2494
PcsI	WCGNNNNNNNCGW	1 cut(s)	83
PdmI	GAANNNNTTC	2 cut(s)	116, 1362
PflMI	CCANNNNNTGG	2 cut(s)	1495, 1978
PkrI	GCNGC	6 cut(s)	54, 185, 409, 933, 1215, 1619
Ple19I	CGATCG	1 cut(s)	32
PleI	GAGTC	1 cut(s)	2584
PpsI	GAGTC	1 cut(s)	2584
Ppu21I	YACGTR	1 cut(s)	1244
PpuMI	RGGWCCY	1 cut(s)	1750
PscI	ACATGT	1 cut(s)	1227
Psp124BI	GAGCTC	1 cut(s)	300
Psp5II	RGGWCCY	1 cut(s)	1750
Psp6I	CCWGG	2 cut(s)	979, 2764
PspFI	CCCAGC	1 cut(s)	1823
PspGI	CCWGG	2 cut(s)	979, 2764
PspN4I	GGNNCC	7 cut(s)	48, 208, 241, 291, 1669, 1752, 2598
PspPI	GGNCC	6 cut(s)	206, 1013, 1750, 2258, 2597, 2771
PspPPI	RGGWCCY	1 cut(s)	1750
PsrI	GAACNNNNNNTAC	2 cut(s)	1176, 1208
PstNI	CAGNNNCTG	1 cut(s)	385
PsuI	RGATCY	5 cut(s)	46, 289, 699, 766, 1791
PvuI	CGATCG	1 cut(s)	32
RsaI	GTAC	3 cut(s)	693, 1242, 1315
RsaNI	GTAC	3 cut(s)	692, 1241, 1314
SacI	GAGCTC	1 cut(s)	300
SapI	GCTCTTC	1 cut(s)	2494
SaqAI	TTAA	9 cut(s)	129, 165, 782, 956, 993, 1473, 1865, 2147, 2406
SatI	GCNGC	6 cut(s)	53, 184, 408, 932, 1214, 1618
Sau96I	GGNCC	6 cut(s)	206, 1013, 1750, 2258, 2597, 2771
SchI	GAGTC	1 cut(s)	2584
ScrFI	CCNGG	6 cut(s)	171, 204, 212, 213, 981, 2766
SduI	GDGCHC	4 cut(s)	300, 746, 1568, 2372
SfaNI	GCATC	9 cut(s)	439, 580, 875, 1414, 1436, 1475, 1559, 1778, 2548
SfuI	TTCGAA	4 cut(s)	718, 1141, 1366, 2309
SinI	GGWCC	4 cut(s)	1013, 1750, 2258, 2597
SmaI	CCCGGG	1 cut(s)	213
SmlI	CTYRAG	3 cut(s)	1027, 1949, 2146
SmoI	CTYRAG	3 cut(s)	1027, 1949, 2146
SphI	GCATGC	1 cut(s)	2113
SseBI	AGGCCT	1 cut(s)	74
SspI	AATATT	1 cut(s)	1258
SspMI	CTAG	8 cut(s)	669, 936, 1091, 1107, 1400, 1914, 1959, 2136
SstI	GAGCTC	1 cut(s)	300
StuI	AGGCCT	1 cut(s)	74
StyD4I	CCNGG	6 cut(s)	169, 202, 210, 211, 979, 2764
StyI	CCWWGG	6 cut(s)	798, 1265, 1442, 2292, 2621, 2822
TaaI	ACNGT	7 cut(s)	849, 1207, 1318, 1744, 1862, 1978, 2449
TaiI	ACGT	4 cut(s)	12, 492, 1022, 1246
TaqII	GACCGA	1 cut(s)	2300
TauI	GCSGC	2 cut(s)	934, 1620
Tru1I	TTAA	9 cut(s)	129, 165, 782, 956, 993, 1473, 1865, 2147, 2406
Tru9I	TTAA	9 cut(s)	129, 165, 782, 956, 993, 1473, 1865, 2147, 2406
TscAI	CASTG	9 cut(s)	148, 378, 386, 746, 881, 1048, 1983, 2379, 2454
TseFI	GTSAC	3 cut(s)	143, 257, 2020
TseI	GCWGC	4 cut(s)	52, 183, 407, 1213
Tsp45I	GTSAC	3 cut(s)	143, 257, 2020
TspDTI	ATGAA	9 cut(s)	89, 612, 923, 1085, 1833, 1959, 2235, 2361, 2727
TspGWI	ACGGA	1 cut(s)	2357
TspMI	CCCGGG	1 cut(s)	211
TspRI	CASTG	9 cut(s)	148, 378, 386, 746, 881, 1048, 1983, 2379, 2454
Van91I	CCANNNNNTGG	2 cut(s)	1495, 1978
Vha464I	CTTAAG	1 cut(s)	2146
VpaK11BI	GGWCC	4 cut(s)	1013, 1750, 2258, 2597
XapI	RAATTY	4 cut(s)	436, 565, 1828, 1851
XbaI	TCTAGA	1 cut(s)	1913
XceI	RCATGY	2 cut(s)	1231, 2113
XmaI	CCCGGG	1 cut(s)	211
XmnI	GAANNNNTTC	2 cut(s)	116, 1362
XspI	CTAG	8 cut(s)	669, 936, 1091, 1107, 1400, 1914, 1959, 2136
Zsp2I	ATGCAT	3 cut(s)	630, 1429, 2115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.