Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0009301

Physical Location & Seq

Genomic Coordinates Reverse (-)

804355 .. 810218

Gene Structure 5864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG014400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGTGAACTTGCTGGAATCCATGCATAAATGTTGTTTACCATCTGGAGTGCCAAGTGAATCCCCTAGTGCCTATGAGAAGAGTTTGGTACACAAGATCTTTGGTGGTCGCCTTCGAAGTCGGGTCAAATGTTTGCAGTGCTCCTATTGCTCTGACAAGTTAGATCCATTCTTAGATTTAAGTCTTGAAATAGCCAAGGCAAACTCTTTGAATAAAGCACTTGTGAACTTTACTGCTGAAGAACAGTTGGATGGTGGGGAAAGGCAATATCAGTGCCAAAGATGCAATCAGAAAGTTCGAGCTATGAAACAGATGACCATTCACAAGCCGCCTAGTGTTCTGTCCATCCATTTAAAGCGGTTTCGTGCATATGACCCTGGACAAAAAATTAACAAAGAAGTTCAGTTTGGTCCTACGTTGGACTTGAGACCTTTTGTCAGTGGAGCAGCATATCCGGAAGGAGATTTGAAATATACTCTTTATGGGGTTCTAGTTCATTGTGGGGCTAGCACCTATTCCGGCCATTATTATTGCTTTGTTCGAACATCAACTGGCATATGGCACTCTCTGGATGACAACAATGTAAGGCAAGTTCGTGAGATGACTGTTTTGCAGCAAAAGGCTTACATGTTGTTCTATGTACGTGATAGAAGAAATATTATTCCAAGGAAGCCTGCTGATGTTGCTCAAAAGGAGTATTTCAAACCTAATGGTACTGTAAATAAAATTACTCCTACTGACAACCATTTGTCGAAAGAACCTATTCGAAAAATTGCAGTTGCGGGCAGATCAAATGATCTAGCCTCTTCTGTTGCACAAAAAGATGCATCAGCTATTGTCCCAAGGGTGTCCCATTTGAAGGAAGCATCAGTTAATCAAAATAATGGCCACATAGTGGCACAAAATATGGTGCGTAAGAAGGAAGCCATTTCAGAATTGTCTTTGAAAGCATCATTATCAGAGGGCTCATTGGGAGGATTAGGAGAAAATATGCCACCATCTACTCTGCTTCCAAGCCGCAAAACTGGCACTTCTGATTCTGCAAGTGCTGTGGCTTCAACAACTGGTGCCAAACTAAATGACTGCAATGAGAAAGCAAGTTCAAATGATAATGATAGGGTTTCAATTATGATATCACCTACTGTGAAGGACCCTGAAATCTTGAAGGCATCTAAGCCTGTTCAAGATGAGATCCCTCAGAATAAGAATCATGCTTCCGGTGCTGGGAATTTGAGTGTGGCTTCATCCAGAATTCCTAACGGTTTAACATTGGAGAAGCTGAATCCTGAAAAGCCATCTGATCCACCAAGCTCTAGAATCAGTCAGGCTGGAAGTTTTACCAATGAACGTGAGAAGGCTAGTGATTGTGGCCAGACAGTGGTAGTTTCTGATTCTGCAAAATTGGCTGGCTCATCAGTTGTGACAAATAGATCATTAGATTTGGAAGCTCCTGACCGCAAGCACCCTAAGGGATTGAAAAAGAAGCACATAAAGTGTAAGGTGGTAGGCATGCATTTCCGGCCATTCTTGCTTTCTAGGGCAGTCTTAAGTGTGCGGAATAAGAAGAAGCACAAAAGGAGTAAACACCCAACTTCAGATTGTAAGAGCCATAGTAAGAAATACTTGGTAGAAAATTATTGTTCTTCATCTGATCAAGGACCATCTACATCTGAGAAAACCCAGACCGATTCCTTGGTTTCTGTCTGTTCGAAGAGAAAGAGAAACAAATCTGGCTTGAAAACGGATGAAGATGGAACTTCTAATAAGTGCTCACTGAATCCCCGTGGTGATTCTTCGATGGATATTAAAGATGTAGAGTTTAGAGAGAGCCTCAATCAGAATGGAACAGTGCTTGCAAGTGATAAACAACAACAAAATGGTTTTGGCTCTTCCTCTGTTACATTGGAAAACAAAAGGGTGTCGAGAGGAACTGATACACCACACAATTGTAAAAGTGATGCAATGCAAAATGGATGGAAGGGCGTGCTGACTCAGGGTCCAGCGGAGACAATTGTTGCACCTTGGGATGGAATAGAATTGCCTCAGTCTCATGTTGTAGAACCAAGCCATGCACAGAGTATCACCATCGGTTATGTCGGAGATGATTGGGATGAAGAATATGATCGGGGAAAGAGAAAGAAGGTAAGGCAAGCAAAACTCACCCCTGGTGGGCCAAATCCTTTCCAAATACTTGCAAACAAGAAAGCACAATTGAAGCAACCAAGGATACAAAGGTTTGATTCTGGAAATCCACCAGTCAGGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH

Protein Analysis

755

Amino Acids

83.03

Weight (kDa)

9.5

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	2 - 213	4.1e-36	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	19 - 194	1.6e-10	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57990
fragaria_vesca	FvH4_1g01010 FvH4_1g01010 FvH4_1g01010
malus_domestica	MD02G1008300.v1.1 MD15G1152500.v1.1
prunus_persica	Prupe.7G262200_v2.0.a1
pyrus_communis	pycom02g00720 pycom15g13710
rosa_chinensis	RchiOBHm_Chr2g0085751
rosa_laevigata	RLG00000015716
rosa_multiflora	Rmu_sc0009759.1_g000004 Rmu_sc0023131.1_g000003 Rmu_sc0033740.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155070
rosa_rugosa	Rorug01G0462900 Rorug01G0462900
rosa_samantha	Rh2AG012000 Rh2BG012600 Rh2CG013400 Rh2DG014400
rosa_wichuraiana	Rw2G001070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1067
AccB7I	CCANNNNNTGG	2 cut(s)	895, 1378
AccIII	TCCGGA	1 cut(s)	454
AciI	CCGC	7 cut(s)	329, 358, 782, 1018, 1456, 1555, 2003
AclWI	GGATC	3 cut(s)	158, 1186, 1295
AcoI	YGGCCR	4 cut(s)	520, 886, 1369, 1520
AcsI	RAATTY	2 cut(s)	1228, 1251
AcuI	CTGAAG	2 cut(s)	258, 1578
AdeI	CACNNNGTG	1 cut(s)	895
AfaI	GTAC	3 cut(s)	90, 642, 715
AfiI	CCNNNNNNNGG	6 cut(s)	859, 895, 1224, 1378, 2027, 2169
AflII	CTTAAG	1 cut(s)	1546
AflIII	ACRYGT	1 cut(s)	627
AhdI	GACNNNNNGTC	2 cut(s)	434, 1995
AjnI	CCWGG	2 cut(s)	376, 2164
AjuI	GAANNNNNNNTTGG	2 cut(s)	390, 422
AluBI	AGCT	5 cut(s)	302, 833, 1279, 1311, 1448
AluI	AGCT	5 cut(s)	302, 833, 1279, 1311, 1448
Alw21I	GWGCWC	2 cut(s)	143, 1772
Alw26I	GTCTC	3 cut(s)	421, 2000, 2052
AlwI	GGATC	3 cut(s)	158, 1186, 1295
Aor13HI	TCCGGA	1 cut(s)	454
AoxI	GGCC	5 cut(s)	520, 886, 1369, 1520, 2171
ApeKI	GCWGC	2 cut(s)	446, 613
ApoI	RAATTY	2 cut(s)	1228, 1251
Asp700I	GAANNNNTTC	1 cut(s)	762
AspS9I	GGNCC	5 cut(s)	410, 1150, 1658, 1997, 2171
AsuHPI	GGTGA	5 cut(s)	16, 1128, 1799, 2074, 2152
AsuII	TTCGAA	4 cut(s)	115, 541, 766, 1709
AsuNHI	GCTAGC	1 cut(s)	506
AvaII	GGWCC	4 cut(s)	410, 1150, 1658, 1997
AxyI	CCTNAGG	1 cut(s)	1467
BaeI	ACNNNNGTAYC	2 cut(s)	2219, 2252
BalI	TGGCCA	2 cut(s)	888, 1371
BanI	GGYRCC	1 cut(s)	1067
BanII	GRGCYC	1 cut(s)	968
Bbv12I	GWGCWC	2 cut(s)	143, 1772
BbvI	GCAGC	2 cut(s)	458, 625
BciT130I	CCWGG	2 cut(s)	378, 2166
BciVI	GTATCC	1 cut(s)	2220
BclI	TGATCA	1 cut(s)	1651
BcoDI	GTCTC	3 cut(s)	421, 2000, 2052
BfaI	CTAG	8 cut(s)	66, 333, 491, 507, 800, 1314, 1359, 1536
BfrI	CTTAAG	1 cut(s)	1546
BfuI	GTATCC	1 cut(s)	2220
BglII	AGATCT	1 cut(s)	96
BisI	GCNGC	4 cut(s)	329, 447, 614, 1018
BlsI	GCNGC	4 cut(s)	330, 448, 615, 1019
Bme1390I	CCNGG	2 cut(s)	378, 2166
Bme18I	GGWCC	4 cut(s)	410, 1150, 1658, 1997
BmeRI	GACNNNNNGTC	2 cut(s)	434, 1995
BmgT120I	GGNCC	5 cut(s)	410, 1150, 1658, 1997, 2171
BmiI	GGNNCC	3 cut(s)	1069, 1152, 1998
BmrFI	CCNGG	2 cut(s)	378, 2166
BmsI	GCATC	7 cut(s)	272, 814, 836, 875, 959, 1178, 1948
BmtI	GCTAGC	1 cut(s)	510
BplI	GAGNNNNNCTC	2 cut(s)	1815, 1847
BpmI	CTGGAG	1 cut(s)	66
Bpu14I	TTCGAA	4 cut(s)	115, 541, 766, 1709
BpuEI	CTTGAG	1 cut(s)	445
BsaAI	YACGTR	1 cut(s)	644
BsaI	GGTCTC	1 cut(s)	421
BsaJI	CCNNGG	9 cut(s)	195, 376, 665, 842, 1692, 1783, 2021, 2164, 2222
BsaWI	WCCGGW	2 cut(s)	454, 1217
Bsc4I	CCNNNNNNNGG	6 cut(s)	859, 895, 1224, 1378, 2027, 2169
Bse1I	ACTGG	4 cut(s)	556, 1030, 1069, 2255
Bse21I	CCTNAGG	1 cut(s)	1467
Bse3DI	GCAATG	2 cut(s)	1093, 1968
BseAI	TCCGGA	1 cut(s)	454
BseBI	CCWGG	2 cut(s)	378, 2166
BseDI	CCNNGG	9 cut(s)	195, 376, 665, 842, 1692, 1783, 2021, 2164, 2222
BseGI	GGATG	8 cut(s)	256, 345, 577, 1244, 1750, 1979, 2032, 2116
BseLI	CCNNNNNNNGG	6 cut(s)	859, 895, 1224, 1378, 2027, 2169
BseMI	GCAATG	2 cut(s)	1093, 1968
BseMII	CTCAG	4 cut(s)	1211, 1662, 2006, 2057
BseNI	ACTGG	4 cut(s)	556, 1030, 1069, 2255
BseXI	GCAGC	2 cut(s)	458, 625
BseYI	CCCAGC	1 cut(s)	1223
BshFI	GGCC	5 cut(s)	522, 888, 1371, 1522, 2173
BshNI	GGYRCC	1 cut(s)	1067
BsiHKAI	GWGCWC	2 cut(s)	143, 1772
BsiSI	CCGG	4 cut(s)	455, 519, 1218, 1519
BslFI	GGGAC	2 cut(s)	824, 835
BslI	CCNNNNNNNGG	6 cut(s)	859, 895, 1224, 1378, 2027, 2169
BsmAI	GTCTC	3 cut(s)	421, 2000, 2052
BsmFI	GGGAC	2 cut(s)	824, 835
BsnI	GGCC	5 cut(s)	522, 888, 1371, 1522, 2173
Bso31I	GGTCTC	1 cut(s)	421
Bsp119I	TTCGAA	4 cut(s)	115, 541, 766, 1709
Bsp1286I	GDGCHC	3 cut(s)	143, 968, 1772
Bsp13I	TCCGGA	1 cut(s)	454
Bsp143I	GATC	9 cut(s)	96, 163, 788, 796, 1191, 1300, 1430, 1651, 2122
BspACI	CCGC	7 cut(s)	329, 358, 782, 1018, 1456, 1555, 2003
BspANI	GGCC	5 cut(s)	522, 888, 1371, 1522, 2173
BspCNI	CTCAG	4 cut(s)	1210, 1663, 2005, 2056
BspEI	TCCGGA	1 cut(s)	454
BspLI	GGNNCC	3 cut(s)	1069, 1152, 1998
BspOI	GCTAGC	1 cut(s)	510
BspPI	GGATC	3 cut(s)	158, 1186, 1295
BspQI	GCTCTTC	1 cut(s)	1894
BspT104I	TTCGAA	4 cut(s)	115, 541, 766, 1709
BspT107I	GGYRCC	1 cut(s)	1067
BspTI	CTTAAG	1 cut(s)	1546
BspTNI	GGTCTC	1 cut(s)	421
BsrDI	GCAATG	2 cut(s)	1093, 1968
BsrI	ACTGG	4 cut(s)	556, 1030, 1069, 2255
BssECI	CCNNGG	9 cut(s)	195, 376, 665, 842, 1692, 1783, 2021, 2164, 2222
BssMI	GATC	9 cut(s)	96, 163, 788, 796, 1191, 1300, 1430, 1651, 2122
BssT1I	CCWWGG	6 cut(s)	195, 665, 842, 1692, 2021, 2222
Bst2UI	CCWGG	2 cut(s)	378, 2166
Bst4CI	ACNGT	7 cut(s)	246, 607, 718, 1144, 1262, 1378, 1849
Bst6I	CTCTTC	4 cut(s)	74, 811, 1706, 1894
BstAFI	CTTAAG	1 cut(s)	1546
BstBAI	YACGTR	1 cut(s)	644
BstBI	TTCGAA	4 cut(s)	115, 541, 766, 1709
BstC8I	GCNNGC	9 cut(s)	508, 675, 784, 1408, 1460, 1511, 1854, 1985, 2151
BstDEI	CTNAG	7 cut(s)	172, 1173, 1197, 1467, 1671, 1992, 2043
BstDSI	CCRYGG	1 cut(s)	1783
BstF5I	GGATG	8 cut(s)	256, 345, 577, 1244, 1750, 1979, 2032, 2116
BstKTI	GATC	9 cut(s)	99, 166, 791, 799, 1194, 1303, 1433, 1654, 2125
BstMAI	GTCTC	3 cut(s)	421, 2000, 2052
BstMBI	GATC	9 cut(s)	96, 163, 788, 796, 1191, 1300, 1430, 1651, 2122
BstMWI	GCNNNNNNNGC	8 cut(s)	147, 282, 683, 1026, 1220, 1403, 1519, 1528
BstNI	CCWGG	2 cut(s)	378, 2166
BstNSI	RCATGY	2 cut(s)	631, 1513
BstSCI	CCNGG	2 cut(s)	376, 2164
BstV1I	GCAGC	2 cut(s)	458, 625
BstX2I	RGATCY	3 cut(s)	96, 163, 1191
BstYI	RGATCY	3 cut(s)	96, 163, 1191
Bsu36I	CCTNAGG	1 cut(s)	1467
BsuI	GTATCC	1 cut(s)	2220
BsuRI	GGCC	5 cut(s)	522, 888, 1371, 1522, 2173
BtgI	CCRYGG	1 cut(s)	1783
BtsCI	GGATG	8 cut(s)	256, 345, 577, 1244, 1750, 1979, 2032, 2116
BtsI	GCAGTG	1 cut(s)	143
BtsIMutI	CAGTG	6 cut(s)	143, 278, 445, 1383, 1772, 1854
Cac8I	GCNNGC	9 cut(s)	508, 675, 784, 1408, 1460, 1511, 1854, 1985, 2151
Cfr13I	GGNCC	5 cut(s)	410, 1150, 1658, 1997, 2171
Csp6I	GTAC	3 cut(s)	89, 641, 714
CspCI	CAANNNNNGTGG	2 cut(s)	1032, 1067
CviAII	CATG	6 cut(s)	22, 628, 1211, 1510, 2051, 2069
CviQI	GTAC	3 cut(s)	89, 641, 714
DdeI	CTNAG	7 cut(s)	172, 1173, 1197, 1467, 1671, 1992, 2043
DpnI	GATC	9 cut(s)	98, 165, 790, 798, 1193, 1302, 1432, 1653, 2124
DpnII	GATC	9 cut(s)	96, 163, 788, 796, 1191, 1300, 1430, 1651, 2122
DraI	TTTAAA	1 cut(s)	354
DraIII	CACNNNGTG	1 cut(s)	895
DriI	GACNNNNNGTC	2 cut(s)	434, 1995
EaeI	YGGCCR	4 cut(s)	520, 886, 1369, 1520
Eam1104I	CTCTTC	4 cut(s)	74, 811, 1706, 1894
Eam1105I	GACNNNNNGTC	2 cut(s)	434, 1995
EarI	CTCTTC	4 cut(s)	74, 811, 1706, 1894
Eco130I	CCWWGG	6 cut(s)	195, 665, 842, 1692, 2021, 2222
Eco24I	GRGCYC	1 cut(s)	968
Eco31I	GGTCTC	1 cut(s)	421
Eco32I	GATATC	1 cut(s)	1134
Eco47I	GGWCC	4 cut(s)	410, 1150, 1658, 1997
Eco57I	CTGAAG	2 cut(s)	258, 1578
Eco81I	CCTNAGG	1 cut(s)	1467
EcoO109I	RGGNCCY	1 cut(s)	1150
EcoRI	GAATTC	1 cut(s)	1251
EcoRII	CCWGG	2 cut(s)	376, 2164
EcoRV	GATATC	1 cut(s)	1134
EcoT14I	CCWWGG	6 cut(s)	195, 665, 842, 1692, 2021, 2222
EcoT22I	ATGCAT	3 cut(s)	27, 829, 1515
EcoT38I	GRGCYC	1 cut(s)	968
ErhI	CCWWGG	6 cut(s)	195, 665, 842, 1692, 2021, 2222
FaeI	CATG	6 cut(s)	25, 631, 1214, 1513, 2054, 2072
FalI	AAGNNNNNCTT	2 cut(s)	1607, 1639
FaqI	GGGAC	2 cut(s)	824, 835
FatI	CATG	6 cut(s)	21, 627, 1210, 1509, 2050, 2068
FauI	CCCGC	1 cut(s)	775
FauNDI	CATATG	2 cut(s)	370, 557
FbaI	TGATCA	1 cut(s)	1651
Fnu4HI	GCNGC	4 cut(s)	329, 447, 614, 1018
FokI	GGATG	8 cut(s)	263, 332, 584, 1231, 1757, 1986, 2039, 2123
FriOI	GRGCYC	1 cut(s)	968
Fsp4HI	GCNGC	4 cut(s)	329, 447, 614, 1018
FspBI	CTAG	8 cut(s)	66, 333, 491, 507, 800, 1314, 1359, 1536
GluI	GCNGC	4 cut(s)	329, 447, 614, 1018
GsaI	CCCAGC	1 cut(s)	1227
GsuI	CTGGAG	1 cut(s)	66
HaeIII	GGCC	5 cut(s)	522, 888, 1371, 1522, 2173
HapII	CCGG	4 cut(s)	455, 519, 1218, 1519
Hin1II	CATG	6 cut(s)	25, 631, 1214, 1513, 2054, 2072
HpaII	CCGG	4 cut(s)	455, 519, 1218, 1519
HphI	GGTGA	5 cut(s)	16, 1128, 1799, 2074, 2152
Hpy166II	GTNNAC	5 cut(s)	7, 38, 91, 226, 1583
Hpy8I	GTNNAC	5 cut(s)	7, 38, 91, 226, 1583
HpyAV	CCTTC	9 cut(s)	122, 452, 853, 913, 1141, 1159, 1348, 1972, 2134
HpyCH4III	ACNGT	7 cut(s)	246, 607, 718, 1144, 1262, 1378, 1849
HpyCH4IV	ACGT	3 cut(s)	416, 643, 1348
HpyF10VI	GCNNNNNNNGC	8 cut(s)	147, 282, 683, 1026, 1220, 1403, 1519, 1528
HpyF3I	CTNAG	7 cut(s)	172, 1173, 1197, 1467, 1671, 1992, 2043
HpySE526I	ACGT	3 cut(s)	416, 643, 1348
Hsp92II	CATG	6 cut(s)	25, 631, 1214, 1513, 2054, 2072
Kpn2I	TCCGGA	1 cut(s)	454
Ksp22I	TGATCA	1 cut(s)	1651
Kzo9I	GATC	9 cut(s)	96, 163, 788, 796, 1191, 1300, 1430, 1651, 2122
LguI	GCTCTTC	1 cut(s)	1894
LmnI	GCTCC	3 cut(s)	146, 443, 1453
Lsp1109I	GCAGC	2 cut(s)	458, 625
LweI	GCATC	7 cut(s)	272, 814, 836, 875, 959, 1178, 1948
MaeI	CTAG	8 cut(s)	66, 333, 491, 507, 800, 1314, 1359, 1536
MaeII	ACGT	3 cut(s)	416, 643, 1348
MaeIII	GTNAC	2 cut(s)	1420, 1897
MalI	GATC	9 cut(s)	98, 165, 790, 798, 1193, 1302, 1432, 1653, 2124
MboI	GATC	9 cut(s)	96, 163, 788, 796, 1191, 1300, 1430, 1651, 2122
MfeI	CAATTG	3 cut(s)	1945, 2010, 2210
MflI	RGATCY	3 cut(s)	96, 163, 1191
MhlI	GDGCHC	3 cut(s)	143, 968, 1772
MlsI	TGGCCA	2 cut(s)	888, 1371
MluNI	TGGCCA	2 cut(s)	888, 1371
MlyI	GAGTC	1 cut(s)	1984
MmeI	TCCRAC	3 cut(s)	228, 399, 2077
MnlI	CCTC	8 cut(s)	814, 955, 968, 1206, 1841, 1903, 1919, 2052
Mox20I	TGGCCA	2 cut(s)	888, 1371
Mph1103I	ATGCAT	3 cut(s)	27, 829, 1515
MroI	TCCGGA	1 cut(s)	454
MroXI	GAANNNNTTC	1 cut(s)	762
MscI	TGGCCA	2 cut(s)	888, 1371
MseI	TTAA	7 cut(s)	179, 353, 390, 873, 1265, 1547, 1806
Msp20I	TGGCCA	2 cut(s)	888, 1371
MspA1I	CMGCKG	1 cut(s)	2003
MspCI	CTTAAG	1 cut(s)	1546
MspI	CCGG	4 cut(s)	455, 519, 1218, 1519
MspR9I	CCNGG	2 cut(s)	378, 2166
MunI	CAATTG	3 cut(s)	1945, 2010, 2210
MvaI	CCWGG	2 cut(s)	378, 2166
MwoI	GCNNNNNNNGC	8 cut(s)	147, 282, 683, 1026, 1220, 1403, 1519, 1528
NdeI	CATATG	2 cut(s)	370, 557
NdeII	GATC	9 cut(s)	96, 163, 788, 796, 1191, 1300, 1430, 1651, 2122
NheI	GCTAGC	1 cut(s)	506
NlaIII	CATG	6 cut(s)	25, 631, 1214, 1513, 2054, 2072
NlaIV	GGNNCC	3 cut(s)	1069, 1152, 1998
NmuCI	GTSAC	1 cut(s)	1420
NsiI	ATGCAT	3 cut(s)	27, 829, 1515
NspI	RCATGY	2 cut(s)	631, 1513
NspV	TTCGAA	4 cut(s)	115, 541, 766, 1709
PaeI	GCATGC	1 cut(s)	1513
PciI	ACATGT	1 cut(s)	627
PciSI	GCTCTTC	1 cut(s)	1894
PdmI	GAANNNNTTC	1 cut(s)	762
PflMI	CCANNNNNTGG	2 cut(s)	895, 1378
PkrI	GCNGC	4 cut(s)	330, 448, 615, 1019
PleI	GAGTC	1 cut(s)	1984
PpsI	GAGTC	1 cut(s)	1984
Ppu21I	YACGTR	1 cut(s)	644
PpuMI	RGGWCCY	1 cut(s)	1150
PscI	ACATGT	1 cut(s)	627
Psp5II	RGGWCCY	1 cut(s)	1150
Psp6I	CCWGG	2 cut(s)	376, 2164
PspFI	CCCAGC	1 cut(s)	1223
PspGI	CCWGG	2 cut(s)	376, 2164
PspN4I	GGNNCC	3 cut(s)	1069, 1152, 1998
PspPI	GGNCC	5 cut(s)	410, 1150, 1658, 1997, 2171
PspPPI	RGGWCCY	1 cut(s)	1150
PsrI	GAACNNNNNNTAC	2 cut(s)	576, 608
PsuI	RGATCY	3 cut(s)	96, 163, 1191
RsaI	GTAC	3 cut(s)	90, 642, 715
RsaNI	GTAC	3 cut(s)	89, 641, 714
SapI	GCTCTTC	1 cut(s)	1894
SaqAI	TTAA	7 cut(s)	179, 353, 390, 873, 1265, 1547, 1806
SatI	GCNGC	4 cut(s)	329, 447, 614, 1018
Sau3AI	GATC	9 cut(s)	96, 163, 788, 796, 1191, 1300, 1430, 1651, 2122
Sau96I	GGNCC	5 cut(s)	410, 1150, 1658, 1997, 2171
SchI	GAGTC	1 cut(s)	1984
ScrFI	CCNGG	2 cut(s)	378, 2166
SduI	GDGCHC	3 cut(s)	143, 968, 1772
SfaNI	GCATC	7 cut(s)	272, 814, 836, 875, 959, 1178, 1948
SfuI	TTCGAA	4 cut(s)	115, 541, 766, 1709
SinI	GGWCC	4 cut(s)	410, 1150, 1658, 1997
SmlI	CTYRAG	2 cut(s)	424, 1546
SmoI	CTYRAG	2 cut(s)	424, 1546
SphI	GCATGC	1 cut(s)	1513
SsiI	CCGC	7 cut(s)	329, 358, 782, 1018, 1456, 1555, 2003
SspI	AATATT	1 cut(s)	658
SspMI	CTAG	8 cut(s)	66, 333, 491, 507, 800, 1314, 1359, 1536
StyD4I	CCNGG	2 cut(s)	376, 2164
StyI	CCWWGG	6 cut(s)	195, 665, 842, 1692, 2021, 2222
TaaI	ACNGT	7 cut(s)	246, 607, 718, 1144, 1262, 1378, 1849
TaiI	ACGT	3 cut(s)	419, 646, 1351
TaqI	TCGA	8 cut(s)	115, 298, 541, 752, 766, 1709, 1796, 1922
TaqII	GACCGA	1 cut(s)	1700
TauI	GCSGC	2 cut(s)	331, 1020
Tru1I	TTAA	7 cut(s)	179, 353, 390, 873, 1265, 1547, 1806
Tru9I	TTAA	7 cut(s)	179, 353, 390, 873, 1265, 1547, 1806
TscAI	CASTG	6 cut(s)	143, 278, 445, 1383, 1779, 1854
TseFI	GTSAC	1 cut(s)	1420
TseI	GCWGC	2 cut(s)	446, 613
Tsp45I	GTSAC	1 cut(s)	1420
TspDTI	ATGAA	7 cut(s)	320, 485, 1233, 1359, 1635, 1761, 2127
TspGWI	ACGGA	1 cut(s)	1757
TspRI	CASTG	6 cut(s)	143, 278, 445, 1383, 1779, 1854
Van91I	CCANNNNNTGG	2 cut(s)	895, 1378
Vha464I	CTTAAG	1 cut(s)	1546
VpaK11BI	GGWCC	4 cut(s)	410, 1150, 1658, 1997
XapI	RAATTY	2 cut(s)	1228, 1251
XbaI	TCTAGA	1 cut(s)	1313
XceI	RCATGY	2 cut(s)	631, 1513
XmnI	GAANNNNTTC	1 cut(s)	762
XspI	CTAG	8 cut(s)	66, 333, 491, 507, 800, 1314, 1359, 1536
Zsp2I	ATGCAT	3 cut(s)	27, 829, 1515

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.