Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0004943

Physical Location & Seq

Genomic Coordinates Forward (+)

12977373 .. 12981998

Gene Structure 4626 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1168800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGCAAGAACCAGAGCTCCACGATCTCTCCGACGACGCCGATTACGCCGCGTCGCTGCAACACGGCTCGGCGAGCATGATGCGGAGCGACAGCGGGAAGCACAGCTCGTCGAGCGAGCACGACGGCGCCGAGGTGGTTTTCTTAAAAGACAATGTCACCATCCACCCTACTCAGTTCGCCTCCGAGAGGATTAGTGGAAGATTGAGGCTAATTAAGCACGGTTCTTCCTTATTCATGACATGGATTCCGTACAACGGGCAAAACTCGAACGCTAGGGTGTCTGAGAAAGATAGGAATCTTTATACCATAAGGCCAGTGCCATTAACGGAGGTCCGGTCGATTCGCCGCCACACTCCGGCGCTTGGATGGCAGTACATTATCATCGTTTTGGCTACAGGACTTGCATTTCCTCCTCTGTATTTCTATAACGGAGGAGTCAAAGAGTTCCTTGCTACAATAAAGCAGCATTTTTTTCTTGTGAGGTCAGCTGAAGATGCAAATGTATTTCTGGTGAATGATTTTCAAAATCCTCTCCAGAGAACTCTATCGTCTTTGGAGTTGCCTAGGGTGCTTTCTGTTGCAAGTGGGCAATCTACATCAGTCTCAGTTGGCGAGACCTTTTCAGATCAAAACCAGGAGAGAACAAGTGGGGATGTCAATCAAGAAGGAAATATAAGCATTTCTCAATACAGTGAGAGGCAAAGGCAAGGGGTTCATGATCCTGCACGAGATCTCTCAATTCAAGTGTTGGAAAAGTTCTCTCTTGTGACCAAATTTGCTCGAGAAACAACTTCTCAACTTTTCCGTGATAATCATAGTAACGGATATGGTGCTATAGAAAGGAGAAGTAATAACCAGCCTCCCATTGATTACCCTCAGAAGGCATCCCATCATTCAAATAGAGTCCCTGAGAAAAGTCCTGTCCCCCCAGATTCCCTGGAGTTTGATAAAGTATCAATGGAATGGGGAAATCCACGACAGCCACCTTTGGGCTCTGATGAGTGGGAAACCTTCATGGATTCTGAAGGAAGGATCGTCAACTCAGAAGCTTTCAGAAAGAGAATATTTTATGGGGGAGTTGAGCACAAACTACGGAAAGAGGTCTGGCCATTCTTGTTAGGATACCATGCATATGATTCAACAGATGCTGAGAGGGAATACCTTAGGGCCATTCAAAAGTCAGAATTTGAAACTGTAAAGAAGCAATGGCAGAGTATCTCTCTGGAACAGGCCAAAAGGTTTACAAAATTCAGGGAGAGAAAAGGCCTCATTGAGAAAGATGTGGTAAGGACTGACAGATCTCTCTCCTACTATGACGGGGACGATAATCCAAATGTGAATCTGTTACGCGATATACTCTTAACGTACTCATTTTACAACTTTGATCTTGGTTACTGTCAGGGTATGAGTGATCTCCTGTCCCCAATTTTGTATGTAATGGAGGATGAGTCTGAATCGTTTTGGTGTTTTGTTTCACTGATGGAGCGCCTTGGGCCAAATTTCAACCGTGACCAAAGTGGCATGCACTCTCAACTTTTTGCAATAATGAAGTTGGTGGAGCTGTTAGACGCTCCGTTGCACAATCACTTTACTCAGAAGGACTGCTTGAATTACTTTTTTTGTTTCCGCTGGGTTCTAATACAATTTAAAAGGGAATTTGAATTCGACAAAACAATGCGCTTGTGGGAGTTATTATGGACACATTATCCGGCCGAGCATCTGCACCTGTATGTCTCTGTGGCGATATTGAAGCGACACCGTAGTAAGATAATTGGGGAGCAAATGGACTTCGACACTCTACTGAAGTTCATTAATGAACTGAGCAGTCATATAGATCTTGATGCAGTGGTCAGGGACGCGGAGGCTCTGTGCATATTTGCCGGCGAGAATGGTGCTGCTTCCATTCCGCCTGGAACTCCACCGTCATTGCCCGTTGATGATGTTTTATTGTACCCTCAACAAGAACTAGACGACATATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUF3548 RabGAP-TBC

Protein Analysis

661

Amino Acids

75.93

Weight (kDa)

5.59

Isoelectric Point (pI)

45.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_RBD	PF12068	45 - 186	3.6e-18	Rab-binding domain (RBD)
RabGAP-TBC	PF00566	363 - 591	4.4e-51	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	450 - 606	1.6e-17	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52580 AT5G52580 AT5G52580
fragaria_vesca	FvH4_1g02680
malus_domestica	MD02G1027400.v1.1 MD15G1168800.v1.1
prunus_persica	Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1
pyrus_communis	pycom02g02230 pycom15g15050
rosa_chinensis	RchiOBHm_Chr2g0087771 RchiOBHm_Chr7g0194011
rosa_laevigata	RLG00000004223 RLG00000015897
rosa_multiflora	Rmu_sc0021871.1_g000005
rosa_roxburghii	Rroxscaffold_2G00153250 Rroxscaffold_3G00261620
rosa_rugosa	Rorug01G0478700 Rorug07G0013200
rosa_samantha	Rh2AG032900 Rh2CG032700 Rh2DG032500 Rh7AG140400 Rh7BG140900 Rh7CG144400 Rh7DG141700
rosa_wichuraiana	Rw2G002560 Rw7G011980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	125
AccII	CGCG	3 cut(s)	50, 1350, 1859
AciI	CCGC	7 cut(s)	48, 82, 93, 346, 1627, 1859, 1907
AclWI	GGATC	2 cut(s)	713, 1040
AcoI	YGGCCR	2 cut(s)	1106, 1710
AcsI	RAATTY	6 cut(s)	773, 1184, 1247, 1498, 1655, 1661
AcuI	CTGAAG	3 cut(s)	510, 1044, 1823
AcyI	GRCGYC	2 cut(s)	36, 126
AfaI	GTAC	4 cut(s)	251, 374, 1367, 1952
AfiI	CCNNNNNNNGG	6 cut(s)	186, 254, 355, 362, 880, 989
AjnI	CCWGG	3 cut(s)	633, 936, 1909
AloI	GAACNNNNNNTCC	1 cut(s)	32
AluBI	AGCT	5 cut(s)	16, 105, 488, 1049, 1561
AluI	AGCT	5 cut(s)	16, 105, 488, 1049, 1561
Alw21I	GWGCWC	3 cut(s)	18, 120, 1086
Alw26I	GTCTC	3 cut(s)	607, 608, 1738
AlwI	GGATC	2 cut(s)	713, 1040
AlwNI	CAGNNNCTG	1 cut(s)	1148
Ama87I	CYCGRG	1 cut(s)	780
AoxI	GGCC	7 cut(s)	311, 1106, 1167, 1230, 1264, 1493, 1710
ApeKI	GCWGC	3 cut(s)	55, 463, 1895
ApoI	RAATTY	6 cut(s)	773, 1184, 1247, 1498, 1655, 1661
AseI	ATTAAT	1 cut(s)	1812
AspA2I	CCTAGG	1 cut(s)	563
AspLEI	GCGC	4 cut(s)	128, 361, 1488, 1680
AspS9I	GGNCC	3 cut(s)	331, 1167, 1493
AsuHPI	GGTGA	2 cut(s)	148, 523
AvaI	CYCGRG	1 cut(s)	780
AvaII	GGWCC	1 cut(s)	331
AvrII	CCTAGG	1 cut(s)	563
AxyI	CCTNAGG	1 cut(s)	1163
BalI	TGGCCA	1 cut(s)	1108
BanI	GGYRCC	1 cut(s)	125
BanII	GRGCYC	2 cut(s)	18, 995
BauI	CACGAG	1 cut(s)	726
Bbv12I	GWGCWC	3 cut(s)	18, 120, 1086
BbvI	GCAGC	3 cut(s)	42, 475, 1882
BccI	CCATC	4 cut(s)	167, 360, 897, 1474
BceAI	ACGGC	2 cut(s)	79, 139
BcgI	CGANNNNNNTGC	4 cut(s)	61, 95, 1874, 1908
BciT130I	CCWGG	3 cut(s)	635, 938, 1911
BciVI	GTATCC	1 cut(s)	1115
BcoDI	GTCTC	3 cut(s)	607, 608, 1738
BfaI	CTAG	3 cut(s)	273, 564, 1967
BfmI	CTRYAG	2 cut(s)	393, 834
BfoI	RGCGCY	3 cut(s)	129, 362, 1489
BfuI	GTATCC	1 cut(s)	1115
BglII	AGATCT	3 cut(s)	730, 1298, 1834
BisI	GCNGC	5 cut(s)	48, 56, 346, 464, 1896
BlnI	CCTAGG	1 cut(s)	563
BlsI	GCNGC	5 cut(s)	49, 57, 347, 465, 1897
Bme1390I	CCNGG	3 cut(s)	635, 938, 1911
Bme18I	GGWCC	1 cut(s)	331
BmeT110I	CYCGRG	1 cut(s)	780
BmgT120I	GGNCC	3 cut(s)	331, 1167, 1493
BmiI	GGNNCC	1 cut(s)	127
BmrFI	CCNGG	3 cut(s)	635, 938, 1911
BmsI	GCATC	6 cut(s)	69, 484, 893, 1135, 1726, 1831
BplI	GAGNNNNNCTC	2 cut(s)	1204, 1236
BpmI	CTGGAG	2 cut(s)	518, 959
BsaBI	GATNNNNATC	2 cut(s)	294, 657
BsaHI	GRCGYC	2 cut(s)	36, 126
BsaI	GGTCTC	1 cut(s)	608
BsaJI	CCNNGG	4 cut(s)	129, 563, 936, 1489
BsaWI	WCCGGW	1 cut(s)	333
BsaXI	ACNNNNNCTCC	9 cut(s)	11, 30, 41, 320, 350, 1433, 1463, 1853, 1883
Bsc4I	CCNNNNNNNGG	6 cut(s)	186, 254, 355, 362, 880, 989
Bse118I	RCCGGY	1 cut(s)	1880
Bse1I	ACTGG	1 cut(s)	314
Bse21I	CCTNAGG	1 cut(s)	1163
Bse3DI	GCAATG	2 cut(s)	1211, 1925
Bse8I	GATNNNNATC	2 cut(s)	294, 657
BseBI	CCWGG	3 cut(s)	635, 938, 1911
BseDI	CCNNGG	4 cut(s)	129, 563, 936, 1489
BseGI	GGATG	5 cut(s)	159, 371, 658, 884, 1450
BseJI	GATNNNNATC	2 cut(s)	294, 657
BseLI	CCNNNNNNNGG	6 cut(s)	186, 254, 355, 362, 880, 989
BseMI	GCAATG	2 cut(s)	1211, 1925
BseMII	CTCAG	9 cut(s)	185, 273, 618, 890, 900, 1056, 1140, 1607, 1811
BseNI	ACTGG	1 cut(s)	314
BseRI	GAGGAG	2 cut(s)	402, 447
BseX3I	CGGCCG	1 cut(s)	1710
BseXI	GCAGC	3 cut(s)	42, 475, 1882
BseYI	CCCAGC	1 cut(s)	1629
BsgI	GTGCAG	2 cut(s)	708, 1706
Bsh1236I	CGCG	3 cut(s)	50, 1350, 1859
Bsh1285I	CGRYCG	2 cut(s)	338, 1713
BshFI	GGCC	7 cut(s)	313, 1108, 1169, 1232, 1266, 1495, 1712
BshNI	GGYRCC	1 cut(s)	125
BsiEI	CGRYCG	2 cut(s)	338, 1713
BsiHKAI	GWGCWC	3 cut(s)	18, 120, 1086
BsiHKCI	CYCGRG	1 cut(s)	780
BsiSI	CCGG	4 cut(s)	334, 356, 1709, 1881
BslFI	GGGAC	5 cut(s)	890, 908, 1334, 1405, 1868
BslI	CCNNNNNNNGG	6 cut(s)	186, 254, 355, 362, 880, 989
BsmAI	GTCTC	3 cut(s)	607, 608, 1738
BsmFI	GGGAC	5 cut(s)	890, 908, 1334, 1405, 1868
BsnI	GGCC	7 cut(s)	313, 1108, 1169, 1232, 1266, 1495, 1712
Bso31I	GGTCTC	1 cut(s)	608
BsoBI	CYCGRG	1 cut(s)	780
Bsp1286I	GDGCHC	4 cut(s)	18, 120, 995, 1086
Bsp143I	GATC	9 cut(s)	22, 625, 718, 730, 1032, 1298, 1384, 1411, 1834
BspACI	CCGC	7 cut(s)	48, 82, 93, 346, 1627, 1859, 1907
BspANI	GGCC	7 cut(s)	313, 1108, 1169, 1232, 1266, 1495, 1712
BspCNI	CTCAG	9 cut(s)	184, 274, 617, 889, 901, 1055, 1141, 1606, 1812
BspFNI	CGCG	3 cut(s)	50, 1350, 1859
BspHI	TCATGA	2 cut(s)	234, 715
BspLI	GGNNCC	1 cut(s)	127
BspPI	GGATC	2 cut(s)	713, 1040
BspT107I	GGYRCC	1 cut(s)	125
BspTNI	GGTCTC	1 cut(s)	608
BsrDI	GCAATG	2 cut(s)	1211, 1925
BsrFI	RCCGGY	1 cut(s)	1880
BsrI	ACTGG	1 cut(s)	314
BssAI	RCCGGY	1 cut(s)	1880
BssECI	CCNNGG	4 cut(s)	129, 563, 936, 1489
BssMI	GATC	9 cut(s)	22, 625, 718, 730, 1032, 1298, 1384, 1411, 1834
BssNI	GRCGYC	2 cut(s)	36, 126
BssSI	CACGAG	1 cut(s)	726
BssT1I	CCWWGG	2 cut(s)	563, 1489
Bst2BI	CACGAG	1 cut(s)	726
Bst2UI	CCWGG	3 cut(s)	635, 938, 1911
Bst4CI	ACNGT	7 cut(s)	221, 692, 1195, 1397, 1508, 1760, 1923
BstACI	GRCGYC	2 cut(s)	36, 126
BstC8I	GCNNGC	4 cut(s)	73, 116, 1523, 1882
BstENI	CCTNNNNNAGG	1 cut(s)	184
BstF5I	GGATG	5 cut(s)	159, 371, 658, 884, 1450
BstFNI	CGCG	3 cut(s)	50, 1350, 1859
BstH2I	RGCGCY	3 cut(s)	129, 362, 1489
BstHHI	GCGC	4 cut(s)	128, 361, 1488, 1680
BstKTI	GATC	9 cut(s)	25, 628, 721, 733, 1035, 1301, 1387, 1414, 1837
BstMAI	GTCTC	3 cut(s)	607, 608, 1738
BstMBI	GATC	9 cut(s)	22, 625, 718, 730, 1032, 1298, 1384, 1411, 1834
BstMCI	CGRYCG	2 cut(s)	338, 1713
BstMWI	GCNNNNNNNGC	8 cut(s)	44, 72, 111, 214, 367, 494, 568, 1492
BstNI	CCWGG	3 cut(s)	635, 938, 1911
BstNSI	RCATGY	1 cut(s)	1525
BstSCI	CCNGG	3 cut(s)	633, 936, 1909
BstSFI	CTRYAG	2 cut(s)	393, 834
BstUI	CGCG	3 cut(s)	50, 1350, 1859
BstV1I	GCAGC	3 cut(s)	42, 475, 1882
BstX2I	RGATCY	3 cut(s)	730, 1298, 1834
BstYI	RGATCY	3 cut(s)	730, 1298, 1834
BstZI	CGGCCG	1 cut(s)	1710
Bsu36I	CCTNAGG	1 cut(s)	1163
BsuI	GTATCC	1 cut(s)	1115
BsuRI	GGCC	7 cut(s)	313, 1108, 1169, 1232, 1266, 1495, 1712
BtsCI	GGATG	5 cut(s)	159, 371, 658, 884, 1450
BtsI	GCAGTG	1 cut(s)	1851
BtsIMutI	CAGTG	4 cut(s)	321, 697, 1475, 1851
Cac8I	GCNNGC	4 cut(s)	73, 116, 1523, 1882
CaiI	CAGNNNCTG	1 cut(s)	1148
CciI	TCATGA	2 cut(s)	234, 715
CfoI	GCGC	4 cut(s)	128, 361, 1488, 1680
Cfr10I	RCCGGY	1 cut(s)	1880
Cfr13I	GGNCC	3 cut(s)	331, 1167, 1493
CseI	GACGC	4 cut(s)	39, 44, 1577, 1865
Csp6I	GTAC	4 cut(s)	250, 373, 1366, 1951
CspCI	CAANNNNNGTGG	2 cut(s)	1908, 1943
CviAII	CATG	7 cut(s)	76, 235, 240, 716, 1015, 1127, 1522
CviQI	GTAC	4 cut(s)	250, 373, 1366, 1951
DinI	GGCGCC	1 cut(s)	127
DpnI	GATC	9 cut(s)	24, 627, 720, 732, 1034, 1300, 1386, 1413, 1836
DpnII	GATC	9 cut(s)	22, 625, 718, 730, 1032, 1298, 1384, 1411, 1834
DraI	TTTAAA	1 cut(s)	1648
EaeI	YGGCCR	2 cut(s)	1106, 1710
EagI	CGGCCG	1 cut(s)	1710
EciI	GGCGGA	1 cut(s)	1896
Ecl136II	GAGCTC	1 cut(s)	16
EclXI	CGGCCG	1 cut(s)	1710
Eco130I	CCWWGG	2 cut(s)	563, 1489
Eco147I	AGGCCT	1 cut(s)	1266
Eco24I	GRGCYC	2 cut(s)	18, 995
Eco31I	GGTCTC	1 cut(s)	608
Eco47I	GGWCC	1 cut(s)	331
Eco52I	CGGCCG	1 cut(s)	1710
Eco53kI	GAGCTC	1 cut(s)	16
Eco57I	CTGAAG	3 cut(s)	510, 1044, 1823
Eco81I	CCTNAGG	1 cut(s)	1163
Eco88I	CYCGRG	1 cut(s)	780
EcoICRI	GAGCTC	1 cut(s)	16
EcoNI	CCTNNNNNAGG	1 cut(s)	184
EcoRI	GAATTC	1 cut(s)	1661
EcoRII	CCWGG	3 cut(s)	633, 936, 1909
EcoT14I	CCWWGG	2 cut(s)	563, 1489
EcoT22I	ATGCAT	1 cut(s)	1132
EcoT38I	GRGCYC	2 cut(s)	18, 995
EgeI	GGCGCC	1 cut(s)	127
EheI	GGCGCC	1 cut(s)	127
ErhI	CCWWGG	2 cut(s)	563, 1489
FaeI	CATG	7 cut(s)	79, 238, 243, 719, 1018, 1130, 1525
FalI	AAGNNNNNCTT	4 cut(s)	432, 464, 1589, 1621
FaqI	GGGAC	5 cut(s)	890, 908, 1334, 1405, 1868
FatI	CATG	7 cut(s)	75, 234, 239, 715, 1014, 1126, 1521
FauI	CCCGC	1 cut(s)	86
FauNDI	CATATG	1 cut(s)	1132
Fnu4HI	GCNGC	5 cut(s)	48, 56, 346, 464, 1896
FokI	GGATG	5 cut(s)	146, 378, 665, 871, 1457
FriOI	GRGCYC	2 cut(s)	18, 995
Fsp4HI	GCNGC	5 cut(s)	48, 56, 346, 464, 1896
FspBI	CTAG	3 cut(s)	273, 564, 1967
GlaI	GCGC	4 cut(s)	127, 360, 1487, 1679
GluI	GCNGC	5 cut(s)	48, 56, 346, 464, 1896
GsaI	CCCAGC	1 cut(s)	1633
GsuI	CTGGAG	2 cut(s)	518, 959
HaeII	RGCGCY	3 cut(s)	129, 362, 1489
HaeIII	GGCC	7 cut(s)	313, 1108, 1169, 1232, 1266, 1495, 1712
HapII	CCGG	4 cut(s)	334, 356, 1709, 1881
HgaI	GACGC	4 cut(s)	39, 44, 1577, 1865
HhaI	GCGC	4 cut(s)	128, 361, 1488, 1680
Hin1I	GRCGYC	2 cut(s)	36, 126
Hin1II	CATG	7 cut(s)	79, 238, 243, 719, 1018, 1130, 1525
Hin6I	GCGC	4 cut(s)	126, 359, 1486, 1678
HinP1I	GCGC	4 cut(s)	126, 359, 1486, 1678
HincII	GTYRAC	1 cut(s)	1039
HindII	GTYRAC	1 cut(s)	1039
HindIII	AAGCTT	1 cut(s)	1047
HpaII	CCGG	4 cut(s)	334, 356, 1709, 1881
HphI	GGTGA	2 cut(s)	148, 523
Hpy166II	GTNNAC	2 cut(s)	1039, 1242
Hpy188III	TCNNGA	7 cut(s)	235, 535, 662, 716, 782, 1223, 1838
Hpy8I	GTNNAC	2 cut(s)	1039, 1242
Hpy99I	CGWCG	5 cut(s)	35, 38, 55, 112, 125
HpyAV	CCTTC	6 cut(s)	659, 874, 1019, 1021, 1023, 1591
HpyCH4III	ACNGT	7 cut(s)	221, 692, 1195, 1397, 1508, 1760, 1923
HpyCH4IV	ACGT	1 cut(s)	1364
HpyF10VI	GCNNNNNNNGC	8 cut(s)	44, 72, 111, 214, 367, 494, 568, 1492
HpySE526I	ACGT	1 cut(s)	1364
Hsp92I	GRCGYC	2 cut(s)	36, 126
Hsp92II	CATG	7 cut(s)	79, 238, 243, 719, 1018, 1130, 1525
HspAI	GCGC	4 cut(s)	126, 359, 1486, 1678
KasI	GGCGCC	1 cut(s)	125
KroI	GCCGGC	1 cut(s)	1880
KroNI	GCCGGC	1 cut(s)	1882
Kzo9I	GATC	9 cut(s)	22, 625, 718, 730, 1032, 1298, 1384, 1411, 1834
LmnI	GCTCC	6 cut(s)	21, 84, 1483, 1558, 1576, 1777
Lsp1109I	GCAGC	3 cut(s)	42, 475, 1882
LweI	GCATC	6 cut(s)	69, 484, 893, 1135, 1726, 1831
MaeI	CTAG	3 cut(s)	273, 564, 1967
MaeII	ACGT	1 cut(s)	1364
MaeIII	GTNAC	6 cut(s)	154, 766, 818, 1344, 1391, 1508
MalI	GATC	9 cut(s)	24, 627, 720, 732, 1034, 1300, 1386, 1413, 1836
MboI	GATC	9 cut(s)	22, 625, 718, 730, 1032, 1298, 1384, 1411, 1834
MboII	GAAGA	3 cut(s)	210, 216, 503
MflI	RGATCY	3 cut(s)	730, 1298, 1834
MhlI	GDGCHC	4 cut(s)	18, 120, 995, 1086
MlsI	TGGCCA	1 cut(s)	1108
MluNI	TGGCCA	1 cut(s)	1108
Mly113I	GGCGCC	1 cut(s)	126
MlyI	GAGTC	3 cut(s)	444, 912, 1457
MmeI	TCCRAC	2 cut(s)	54, 729
Mox20I	TGGCCA	1 cut(s)	1108
Mph1103I	ATGCAT	1 cut(s)	1132
MroNI	GCCGGC	1 cut(s)	1880
MscI	TGGCCA	1 cut(s)	1108
MseI	TTAA	6 cut(s)	143, 213, 323, 1361, 1647, 1812
MslI	CAYNNNNRTG	2 cut(s)	1131, 1728
Msp20I	TGGCCA	1 cut(s)	1108
MspA1I	CMGCKG	3 cut(s)	93, 488, 1629
MspI	CCGG	4 cut(s)	334, 356, 1709, 1881
MspR9I	CCNGG	3 cut(s)	635, 938, 1911
MvaI	CCWGG	3 cut(s)	635, 938, 1911
MvnI	CGCG	3 cut(s)	50, 1350, 1859
MwoI	GCNNNNNNNGC	8 cut(s)	44, 72, 111, 214, 367, 494, 568, 1492
NaeI	GCCGGC	1 cut(s)	1882
NarI	GGCGCC	1 cut(s)	126
NdeI	CATATG	1 cut(s)	1132
NdeII	GATC	9 cut(s)	22, 625, 718, 730, 1032, 1298, 1384, 1411, 1834
NgoMIV	GCCGGC	1 cut(s)	1880
NlaIII	CATG	7 cut(s)	79, 238, 243, 719, 1018, 1130, 1525
NlaIV	GGNNCC	1 cut(s)	127
NmeAIII	GCCGAG	3 cut(s)	47, 154, 1738
NmuCI	GTSAC	3 cut(s)	154, 766, 1508
NsiI	ATGCAT	1 cut(s)	1132
NspI	RCATGY	1 cut(s)	1525
PaeI	GCATGC	1 cut(s)	1525
PaeR7I	CTCGAG	1 cut(s)	780
PagI	TCATGA	2 cut(s)	234, 715
PceI	AGGCCT	1 cut(s)	1266
PcsI	WCGNNNNNNNCGW	2 cut(s)	27, 126
PdiI	GCCGGC	1 cut(s)	1882
PfeI	GAWTC	8 cut(s)	244, 295, 340, 932, 1019, 1136, 1339, 1454
PflFI	GACNNNGTC	1 cut(s)	152
PkrI	GCNGC	5 cut(s)	49, 57, 347, 465, 1897
PleI	GAGTC	3 cut(s)	443, 911, 1456
PluTI	GGCGCC	1 cut(s)	129
PpsI	GAGTC	3 cut(s)	443, 911, 1456
PshBI	ATTAAT	1 cut(s)	1812
Psp124BI	GAGCTC	1 cut(s)	18
Psp6I	CCWGG	3 cut(s)	633, 936, 1909
PspFI	CCCAGC	1 cut(s)	1629
PspGI	CCWGG	3 cut(s)	633, 936, 1909
PspN4I	GGNNCC	1 cut(s)	127
PspPI	GGNCC	3 cut(s)	331, 1167, 1493
PstNI	CAGNNNCTG	1 cut(s)	1148
PsuI	RGATCY	3 cut(s)	730, 1298, 1834
PsyI	GACNNNGTC	1 cut(s)	152
PvuII	CAGCTG	1 cut(s)	488
RsaI	GTAC	4 cut(s)	251, 374, 1367, 1952
RsaNI	GTAC	4 cut(s)	250, 373, 1366, 1951
RseI	CAYNNNNRTG	2 cut(s)	1131, 1728
SacI	GAGCTC	1 cut(s)	18
SaqAI	TTAA	6 cut(s)	143, 213, 323, 1361, 1647, 1812
SatI	GCNGC	5 cut(s)	48, 56, 346, 464, 1896
Sau3AI	GATC	9 cut(s)	22, 625, 718, 730, 1032, 1298, 1384, 1411, 1834
Sau96I	GGNCC	3 cut(s)	331, 1167, 1493
SchI	GAGTC	3 cut(s)	444, 912, 1457
ScrFI	CCNGG	3 cut(s)	635, 938, 1911
SduI	GDGCHC	4 cut(s)	18, 120, 995, 1086
SfaNI	GCATC	6 cut(s)	69, 484, 893, 1135, 1726, 1831
SfcI	CTRYAG	2 cut(s)	393, 834
SfoI	GGCGCC	1 cut(s)	127
Sfr274I	CTCGAG	1 cut(s)	780
SinI	GGWCC	1 cut(s)	331
SlaI	CTCGAG	1 cut(s)	780
SmiMI	CAYNNNNRTG	2 cut(s)	1131, 1728
SmlI	CTYRAG	1 cut(s)	780
SmoI	CTYRAG	1 cut(s)	780
SphI	GCATGC	1 cut(s)	1525
SseBI	AGGCCT	1 cut(s)	1266
SsiI	CCGC	7 cut(s)	48, 82, 93, 346, 1627, 1859, 1907
SspDI	GGCGCC	1 cut(s)	125
SspI	AATATT	1 cut(s)	1065
SspMI	CTAG	3 cut(s)	273, 564, 1967
SstI	GAGCTC	1 cut(s)	18
StuI	AGGCCT	1 cut(s)	1266
StyD4I	CCNGG	3 cut(s)	633, 936, 1909
StyI	CCWWGG	2 cut(s)	563, 1489
TaaI	ACNGT	7 cut(s)	221, 692, 1195, 1397, 1508, 1760, 1923
TaiI	ACGT	1 cut(s)	1367
TaqI	TCGA	6 cut(s)	110, 266, 338, 781, 1665, 1791
TatI	WGTACW	1 cut(s)	372
TauI	GCSGC	2 cut(s)	50, 348
TfiI	GAWTC	8 cut(s)	244, 295, 340, 932, 1019, 1136, 1339, 1454
Tru1I	TTAA	6 cut(s)	143, 213, 323, 1361, 1647, 1812
Tru9I	TTAA	6 cut(s)	143, 213, 323, 1361, 1647, 1812
TscAI	CASTG	4 cut(s)	321, 697, 1482, 1851
TseFI	GTSAC	3 cut(s)	154, 766, 1508
TseI	GCWGC	3 cut(s)	55, 463, 1895
Tsp45I	GTSAC	3 cut(s)	154, 766, 1508
TspDTI	ATGAA	6 cut(s)	223, 704, 1003, 1562, 1798, 1830
TspGWI	ACGGA	7 cut(s)	237, 341, 444, 794, 837, 1108, 1563
TspRI	CASTG	4 cut(s)	321, 697, 1482, 1851
Tth111I	GACNNNGTC	1 cut(s)	152
VpaK11BI	GGWCC	1 cut(s)	331
VspI	ATTAAT	1 cut(s)	1812
XagI	CCTNNNNNAGG	1 cut(s)	184
XapI	RAATTY	6 cut(s)	773, 1184, 1247, 1498, 1655, 1661
XceI	RCATGY	1 cut(s)	1525
XhoI	CTCGAG	1 cut(s)	780
XmaJI	CCTAGG	1 cut(s)	563
XspI	CTAG	3 cut(s)	273, 564, 1967
Zsp2I	ATGCAT	1 cut(s)	1132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.