Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0004943

Physical Location & Seq

Genomic Coordinates Forward (+)

10437639 .. 10442427

Gene Structure 4789 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g15050.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGTCGGCTCGGCTTTCCGGGTCAACTTGGCTTGCAGACCCAAGCTATCTGAACACGAGGAAAGACCCTCATTACGCGCCATACCGCTTACGTGGACGCCCCTCGCCTTAAGAATTCTCCACGGCGACCGCACTGCCTTGCCCACTAAGAATTCTCTCTCCTCTCCGCTTTCTTTCTATCTGCAATCGTCGGCGATGCAAGAACCAGAGCTTCACGATCTCTCCGACGACGCCGATTACGCCGCGTCGCAGCAACATGGCTCCGCGAGCATGATGCGGAGCGACAGCGGGAAGCACAGCTCGTCGAGCGAGCACGACGGCGCCGAGGTAGTTTTCTTGAAAGACAATGTCACCATCCACCCTACTCAATTCGCCTCCGAGAGGATTAGTGGAAGATTGAGGCTAATTAAGCACGATAGGAATCTTTATACCATAAGGTCAGTGCCATTAACGGAGGTCCGGTCGATTCGCCGCCACACTCCAGCGCTTGGATGGCAGTACATTATCATCGTTTTGGCTACAGGACTTGCATTTCCTCCTCTGTATTTCTATAATGGAGGAGTCAAAGAGTTCCTTGCTACGATAAAGCAACATTTGTTTCTTGTGAGGTCAGCTGAAGATGCAAATGTATTTCTGGTGAATGATTTTCAAAATCCTCTCCAGAGAACTCTATCGTCTTTGGAGTTGCCTAGGGTGCTTTCTGTTGCAAGTGGGGTCTCAGTTGGCGAGACCTTTTCAGATCTAAACCAGGAGAGAACAAGTGGGGATGTCAATCAAGAAGGAAATATAAGCATTTCTCAATACAGTGAGAGGCAAAGGCAAAGGGTTCATGATCCTGCACGAGATCTCTCAATTCAAGTGTTGGAAAAGTTTTCTCTCGTGACCAAATTTGCTCGAGAAACAACTTCTCAACTTTTCCGTGATAATCATAGCAACGGATATGGTGCTATAGAAAGGAGAAGTAATAACCAGCCTCCCATTGATTACCCTCAGAAGGCATCCCATCATTCAAATAGAGTCCCTGAGAAAAGTCCTGTTCCCCCAGATTCTGTGGAGTTTGATAAAGTATCAATGGAATGGGGAAATCCACGACAGCCACCTTTGGGCTCTGATGAGTGGGAAACCTTCATGGATTCTGAAGGAAGGATCGTCAACTCAGAAGCTTTCAGAAAGAGAATATTTTATGGGGGAATTGAGCACAAACTACGGAAAGAGGTCTGGCCATTCTTGTTGGGATACCATGCATATGATTCAACAGATGCTGAGAGGGAATACCTTAGGGCCGTTAAAAAGTCAGAATTTGAAACTGTAAAGAAGCAATGGCAGAGTATCTCTCCAGAACAGGCCAAAAGGTTTACAAAATTCAGGGAGAGAAAAGGCCTCATTGAGAAAGATGTGGTAAGGACTGACAGATCTCTCTCCTACTACGACGGGGACGATAATCCAAATGTGAATCTGTTACGTGATATACTCTTAACGTACTCATTTTACAACTTCGATCTTGGTTACTGTCAGGGTATGAGTGATCTCCTGTCCCCAATTTTGTATGTAATGGAGGATGAGTCTGAATCGTTTTGGTGTTTTGTTTCACTGATGGAGCGCCTTGGGCCAAATTTCAACCGTGACCAAAGTGGCATGCACTCTCAACTTTTTGCAATAATGAAGTTGGTGGAGCTGTTAGACGCTCCGTTGCACAATCACTTGACTCAGAAGGACTGCTTGAATTACTTTTTTTGTTTCCGCTGGGTTCTAATACAATTTAAAAGGGAATTTGAATTCGACAAAACAATGCGCTTGTGGGAGGTATTGTGGACACATTATCCGTCTGAGCATCTGCACCTGTATGTCTGTGTGGCGATATTGAAGCGACACCGTAGTAAGATAATTGGGGAGCAAATGGACTTCGACACTCTACTGAAGTTCATTAATGAACTGAGCGGTTGTATCGATCTTGATGCAGTGGTCAGGGACGCGGAGGCTCTGTGCATATGTGCCGGCGAGAATGGTGCTGCTTCCATTCCGCCCGGAACGCCACCGTCATTGCCCGTTGATGATGTTTTATTGTACCCTCAACAAGAACTAGACGACATATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUF3548 RabGAP-TBC

Protein Analysis

699

Amino Acids

80.04

Weight (kDa)

5.89

Isoelectric Point (pI)

49.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52580 AT5G52580 AT5G52580
fragaria_vesca	FvH4_1g02680
malus_domestica	MD02G1027400.v1.1 MD15G1168800.v1.1
prunus_persica	Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1
pyrus_communis	pycom02g02230 pycom15g15050
rosa_chinensis	RchiOBHm_Chr2g0087771 RchiOBHm_Chr7g0194011
rosa_laevigata	RLG00000004223 RLG00000015897
rosa_multiflora	Rmu_sc0021871.1_g000005
rosa_roxburghii	Rroxscaffold_2G00153250 Rroxscaffold_3G00261620
rosa_rugosa	Rorug01G0478700 Rorug07G0013200
rosa_samantha	Rh2AG032900 Rh2CG032700 Rh2DG032500 Rh7AG140400 Rh7BG140900 Rh7CG144400 Rh7DG141700
rosa_wichuraiana	Rw2G002560 Rw7G011980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	320
AccB7I	CCANNNNNTGG	1 cut(s)	488
AccBSI	CCGCTC	1 cut(s)	1938
AccII	CGCG	4 cut(s)	78, 245, 266, 1973
AclWI	GGATC	2 cut(s)	827, 1154
AcoI	YGGCCR	1 cut(s)	1220
AcsI	RAATTY	8 cut(s)	114, 151, 887, 1298, 1361, 1612, 1769, 1775
AcuI	CTGAAG	3 cut(s)	636, 1158, 1937
AcyI	GRCGYC	3 cut(s)	98, 231, 321
AfaI	GTAC	3 cut(s)	500, 1481, 2066
AfeI	AGCGCT	1 cut(s)	486
AfiI	CCNNNNNNNGG	4 cut(s)	381, 488, 994, 1103
AflII	CTTAAG	1 cut(s)	109
AjnI	CCWGG	1 cut(s)	747
AluBI	AGCT	6 cut(s)	46, 211, 300, 614, 1163, 1675
AluI	AGCT	6 cut(s)	46, 211, 300, 614, 1163, 1675
Alw21I	GWGCWC	2 cut(s)	315, 1200
Alw26I	GTCTC	2 cut(s)	721, 722
AlwI	GGATC	2 cut(s)	827, 1154
AlwNI	CAGNNNCTG	2 cut(s)	1049, 1262
Ama87I	CYCGRG	1 cut(s)	894
Aor51HI	AGCGCT	1 cut(s)	486
AoxI	GGCC	5 cut(s)	1220, 1281, 1344, 1378, 1607
ApeKI	GCWGC	2 cut(s)	250, 2009
ApoI	RAATTY	8 cut(s)	114, 151, 887, 1298, 1361, 1612, 1769, 1775
AseI	ATTAAT	1 cut(s)	1926
AspA2I	CCTAGG	1 cut(s)	689
AspLEI	GCGC	5 cut(s)	80, 323, 487, 1602, 1794
AspS9I	GGNCC	3 cut(s)	457, 1281, 1607
AsuC2I	CCSGG	2 cut(s)	20, 2025
AsuHPI	GGTGA	2 cut(s)	343, 649
AvaI	CYCGRG	1 cut(s)	894
AvaII	GGWCC	1 cut(s)	457
AvrII	CCTAGG	1 cut(s)	689
AxyI	CCTNAGG	1 cut(s)	1277
BalI	TGGCCA	1 cut(s)	1222
BanI	GGYRCC	1 cut(s)	320
BanII	GRGCYC	1 cut(s)	1109
BauI	CACGAG	3 cut(s)	56, 840, 878
Bbv12I	GWGCWC	2 cut(s)	315, 1200
BbvI	GCAGC	2 cut(s)	262, 1996
BccI	CCATC	4 cut(s)	362, 486, 1011, 1588
BceAI	ACGGC	3 cut(s)	139, 334, 1268
BcgI	CGANNNNNNTGC	8 cut(s)	116, 150, 256, 290, 1937, 1971, 1988, 2022
BciT130I	CCWGG	1 cut(s)	749
BciVI	GTATCC	1 cut(s)	1229
BcnI	CCSGG	2 cut(s)	20, 2025
BcoDI	GTCTC	2 cut(s)	721, 722
BfaI	CTAG	2 cut(s)	690, 2081
BfmI	CTRYAG	2 cut(s)	519, 948
BfoI	RGCGCY	3 cut(s)	324, 488, 1603
BfrI	CTTAAG	1 cut(s)	109
BfuI	GTATCC	1 cut(s)	1229
BglII	AGATCT	3 cut(s)	739, 844, 1412
BisI	GCNGC	4 cut(s)	243, 251, 472, 2010
BlnI	CCTAGG	1 cut(s)	689
BlsI	GCNGC	4 cut(s)	244, 252, 473, 2011
Bme1390I	CCNGG	3 cut(s)	20, 749, 2025
Bme18I	GGWCC	1 cut(s)	457
BmeT110I	CYCGRG	1 cut(s)	894
BmgT120I	GGNCC	3 cut(s)	457, 1281, 1607
BmiI	GGNNCC	2 cut(s)	262, 322
BmrFI	CCNGG	3 cut(s)	20, 749, 2025
BmsI	GCATC	7 cut(s)	186, 264, 610, 1007, 1249, 1840, 1945
BplI	GAGNNNNNCTC	2 cut(s)	1318, 1350
BpmI	CTGGAG	3 cut(s)	465, 644, 1320
BpuMI	CCSGG	2 cut(s)	20, 2025
Bsa29I	ATCGAT	1 cut(s)	1947
BsaAI	YACGTR	2 cut(s)	93, 1463
BsaBI	GATNNNNATC	2 cut(s)	420, 771
BsaHI	GRCGYC	3 cut(s)	98, 231, 321
BsaI	GGTCTC	2 cut(s)	721, 722
BsaJI	CCNNGG	4 cut(s)	121, 324, 689, 1603
BsaWI	WCCGGW	1 cut(s)	459
Bsc4I	CCNNNNNNNGG	4 cut(s)	381, 488, 994, 1103
Bse118I	RCCGGY	1 cut(s)	1994
Bse21I	CCTNAGG	1 cut(s)	1277
Bse3DI	GCAATG	2 cut(s)	1325, 2039
Bse8I	GATNNNNATC	2 cut(s)	420, 771
BseBI	CCWGG	1 cut(s)	749
BseCI	ATCGAT	1 cut(s)	1947
BseDI	CCNNGG	4 cut(s)	121, 324, 689, 1603
BseGI	GGATG	5 cut(s)	354, 497, 772, 998, 1564
BseJI	GATNNNNATC	2 cut(s)	420, 771
BseLI	CCNNNNNNNGG	4 cut(s)	381, 488, 994, 1103
BseMI	GCAATG	2 cut(s)	1325, 2039
BseMII	CTCAG	8 cut(s)	732, 1004, 1014, 1170, 1254, 1721, 1818, 1925
BseRI	GAGGAG	3 cut(s)	151, 528, 573
BseXI	GCAGC	2 cut(s)	262, 1996
BseYI	CCCAGC	1 cut(s)	1743
BsgI	GTGCAG	2 cut(s)	822, 1820
Bsh1236I	CGCG	4 cut(s)	78, 245, 266, 1973
Bsh1285I	CGRYCG	2 cut(s)	130, 464
BshFI	GGCC	5 cut(s)	1222, 1283, 1346, 1380, 1609
BshNI	GGYRCC	1 cut(s)	320
BshVI	ATCGAT	1 cut(s)	1947
BsiEI	CGRYCG	2 cut(s)	130, 464
BsiHKAI	GWGCWC	2 cut(s)	315, 1200
BsiHKCI	CYCGRG	1 cut(s)	894
BsiSI	CCGG	4 cut(s)	19, 460, 1995, 2025
BslFI	GGGAC	4 cut(s)	1004, 1448, 1519, 1982
BslI	CCNNNNNNNGG	4 cut(s)	381, 488, 994, 1103
BsmAI	GTCTC	2 cut(s)	721, 722
BsmFI	GGGAC	4 cut(s)	1004, 1448, 1519, 1982
BsnI	GGCC	5 cut(s)	1222, 1283, 1346, 1380, 1609
Bso31I	GGTCTC	2 cut(s)	721, 722
BsoBI	CYCGRG	1 cut(s)	894
Bsp1286I	GDGCHC	3 cut(s)	315, 1109, 1200
Bsp143I	GATC	9 cut(s)	217, 739, 832, 844, 1146, 1412, 1498, 1525, 1948
BspANI	GGCC	5 cut(s)	1222, 1283, 1346, 1380, 1609
BspCNI	CTCAG	8 cut(s)	731, 1003, 1015, 1169, 1255, 1720, 1819, 1926
BspDI	ATCGAT	1 cut(s)	1947
BspFNI	CGCG	4 cut(s)	78, 245, 266, 1973
BspHI	TCATGA	1 cut(s)	829
BspLI	GGNNCC	2 cut(s)	262, 322
BspPI	GGATC	2 cut(s)	827, 1154
BspT107I	GGYRCC	1 cut(s)	320
BspTI	CTTAAG	1 cut(s)	109
BspTNI	GGTCTC	2 cut(s)	721, 722
BsrBI	CCGCTC	1 cut(s)	1938
BsrDI	GCAATG	2 cut(s)	1325, 2039
BsrFI	RCCGGY	1 cut(s)	1994
BssAI	RCCGGY	1 cut(s)	1994
BssECI	CCNNGG	4 cut(s)	121, 324, 689, 1603
BssMI	GATC	9 cut(s)	217, 739, 832, 844, 1146, 1412, 1498, 1525, 1948
BssNI	GRCGYC	3 cut(s)	98, 231, 321
BssSI	CACGAG	3 cut(s)	56, 840, 878
BssT1I	CCWWGG	2 cut(s)	689, 1603
Bst2BI	CACGAG	3 cut(s)	56, 840, 878
Bst2UI	CCWGG	1 cut(s)	749
Bst4CI	ACNGT	6 cut(s)	806, 1309, 1511, 1622, 1874, 2037
BstACI	GRCGYC	3 cut(s)	98, 231, 321
BstAFI	CTTAAG	1 cut(s)	109
BstBAI	YACGTR	2 cut(s)	93, 1463
BstC8I	GCNNGC	5 cut(s)	34, 268, 311, 1637, 1996
BstDSI	CCRYGG	1 cut(s)	121
BstENI	CCTNNNNNAGG	1 cut(s)	379
BstF5I	GGATG	5 cut(s)	354, 497, 772, 998, 1564
BstFNI	CGCG	4 cut(s)	78, 245, 266, 1973
BstH2I	RGCGCY	3 cut(s)	324, 488, 1603
BstHHI	GCGC	5 cut(s)	80, 323, 487, 1602, 1794
BstKTI	GATC	9 cut(s)	220, 742, 835, 847, 1149, 1415, 1501, 1528, 1951
BstMAI	GTCTC	2 cut(s)	721, 722
BstMBI	GATC	9 cut(s)	217, 739, 832, 844, 1146, 1412, 1498, 1525, 1948
BstMCI	CGRYCG	2 cut(s)	130, 464
BstMWI	GCNNNNNNNGC	9 cut(s)	239, 267, 306, 409, 493, 620, 694, 1606, 2029
BstNI	CCWGG	1 cut(s)	749
BstNSI	RCATGY	1 cut(s)	1639
BstSCI	CCNGG	3 cut(s)	18, 747, 2023
BstSFI	CTRYAG	2 cut(s)	519, 948
BstUI	CGCG	4 cut(s)	78, 245, 266, 1973
BstV1I	GCAGC	2 cut(s)	262, 1996
BstX2I	RGATCY	3 cut(s)	739, 844, 1412
BstYI	RGATCY	3 cut(s)	739, 844, 1412
Bsu15I	ATCGAT	1 cut(s)	1947
Bsu36I	CCTNAGG	1 cut(s)	1277
BsuI	GTATCC	1 cut(s)	1229
BsuRI	GGCC	5 cut(s)	1222, 1283, 1346, 1380, 1609
BsuTUI	ATCGAT	1 cut(s)	1947
BtgI	CCRYGG	1 cut(s)	121
BtgZI	GCGATG	1 cut(s)	209
BtsCI	GGATG	5 cut(s)	354, 497, 772, 998, 1564
BtsI	GCAGTG	2 cut(s)	132, 1965
BtsIMutI	CAGTG	5 cut(s)	132, 447, 811, 1589, 1965
Cac8I	GCNNGC	5 cut(s)	34, 268, 311, 1637, 1996
CaiI	CAGNNNCTG	2 cut(s)	1049, 1262
CciI	TCATGA	1 cut(s)	829
CfoI	GCGC	5 cut(s)	80, 323, 487, 1602, 1794
Cfr10I	RCCGGY	1 cut(s)	1994
Cfr13I	GGNCC	3 cut(s)	457, 1281, 1607
ClaI	ATCGAT	1 cut(s)	1947
CseI	GACGC	5 cut(s)	106, 234, 239, 1691, 1979
Csp6I	GTAC	3 cut(s)	499, 1480, 2065
CspCI	CAANNNNNGTGG	2 cut(s)	2022, 2057
CviAII	CATG	6 cut(s)	257, 271, 830, 1129, 1241, 1636
CviQI	GTAC	3 cut(s)	499, 1480, 2065
DinI	GGCGCC	1 cut(s)	322
DpnI	GATC	9 cut(s)	219, 741, 834, 846, 1148, 1414, 1500, 1527, 1950
DpnII	GATC	9 cut(s)	217, 739, 832, 844, 1146, 1412, 1498, 1525, 1948
DraI	TTTAAA	1 cut(s)	1762
EaeI	YGGCCR	1 cut(s)	1220
EciI	GGCGGA	1 cut(s)	2010
Eco130I	CCWWGG	2 cut(s)	689, 1603
Eco147I	AGGCCT	1 cut(s)	1380
Eco24I	GRGCYC	1 cut(s)	1109
Eco31I	GGTCTC	2 cut(s)	721, 722
Eco47I	GGWCC	1 cut(s)	457
Eco47III	AGCGCT	1 cut(s)	486
Eco57I	CTGAAG	3 cut(s)	636, 1158, 1937
Eco81I	CCTNAGG	1 cut(s)	1277
Eco88I	CYCGRG	1 cut(s)	894
EcoNI	CCTNNNNNAGG	1 cut(s)	379
EcoRI	GAATTC	3 cut(s)	114, 151, 1775
EcoRII	CCWGG	1 cut(s)	747
EcoT14I	CCWWGG	2 cut(s)	689, 1603
EcoT22I	ATGCAT	1 cut(s)	1246
EcoT38I	GRGCYC	1 cut(s)	1109
EgeI	GGCGCC	1 cut(s)	322
EheI	GGCGCC	1 cut(s)	322
ErhI	CCWWGG	2 cut(s)	689, 1603
FaeI	CATG	6 cut(s)	260, 274, 833, 1132, 1244, 1639
FalI	AAGNNNNNCTT	4 cut(s)	558, 590, 1703, 1735
FaqI	GGGAC	4 cut(s)	1004, 1448, 1519, 1982
FatI	CATG	6 cut(s)	256, 270, 829, 1128, 1240, 1635
FauI	CCCGC	1 cut(s)	281
FauNDI	CATATG	2 cut(s)	1246, 1988
Fnu4HI	GCNGC	4 cut(s)	243, 251, 472, 2010
FokI	GGATG	5 cut(s)	341, 504, 779, 985, 1571
FriOI	GRGCYC	1 cut(s)	1109
Fsp4HI	GCNGC	4 cut(s)	243, 251, 472, 2010
FspBI	CTAG	2 cut(s)	690, 2081
GlaI	GCGC	5 cut(s)	79, 322, 486, 1601, 1793
GluI	GCNGC	4 cut(s)	243, 251, 472, 2010
GsaI	CCCAGC	1 cut(s)	1747
GsuI	CTGGAG	3 cut(s)	465, 644, 1320
HaeII	RGCGCY	3 cut(s)	324, 488, 1603
HaeIII	GGCC	5 cut(s)	1222, 1283, 1346, 1380, 1609
HapII	CCGG	4 cut(s)	19, 460, 1995, 2025
HgaI	GACGC	5 cut(s)	106, 234, 239, 1691, 1979
HhaI	GCGC	5 cut(s)	80, 323, 487, 1602, 1794
Hin1I	GRCGYC	3 cut(s)	98, 231, 321
Hin1II	CATG	6 cut(s)	260, 274, 833, 1132, 1244, 1639
Hin6I	GCGC	5 cut(s)	78, 321, 485, 1600, 1792
HinP1I	GCGC	5 cut(s)	78, 321, 485, 1600, 1792
HincII	GTYRAC	2 cut(s)	25, 1153
HindII	GTYRAC	2 cut(s)	25, 1153
HindIII	AAGCTT	1 cut(s)	1161
HpaII	CCGG	4 cut(s)	19, 460, 1995, 2025
HphI	GGTGA	2 cut(s)	343, 649
Hpy166II	GTNNAC	5 cut(s)	25, 96, 1153, 1356, 1812
Hpy188III	TCNNGA	9 cut(s)	215, 337, 661, 776, 830, 880, 896, 1337, 1952
Hpy8I	GTNNAC	5 cut(s)	25, 96, 1153, 1356, 1812
Hpy99I	CGWCG	7 cut(s)	193, 230, 233, 250, 307, 320, 1433
HpyAV	CCTTC	6 cut(s)	773, 988, 1133, 1135, 1137, 1705
HpyCH4III	ACNGT	6 cut(s)	806, 1309, 1511, 1622, 1874, 2037
HpyCH4IV	ACGT	3 cut(s)	92, 1462, 1478
HpyF10VI	GCNNNNNNNGC	9 cut(s)	239, 267, 306, 409, 493, 620, 694, 1606, 2029
HpySE526I	ACGT	3 cut(s)	92, 1462, 1478
Hsp92I	GRCGYC	3 cut(s)	98, 231, 321
Hsp92II	CATG	6 cut(s)	260, 274, 833, 1132, 1244, 1639
HspAI	GCGC	5 cut(s)	78, 321, 485, 1600, 1792
KasI	GGCGCC	1 cut(s)	320
KroI	GCCGGC	1 cut(s)	1994
KroNI	GCCGGC	1 cut(s)	1996
Kzo9I	GATC	9 cut(s)	217, 739, 832, 844, 1146, 1412, 1498, 1525, 1948
LmnI	GCTCC	6 cut(s)	266, 279, 1597, 1672, 1690, 1891
Lsp1109I	GCAGC	2 cut(s)	262, 1996
LweI	GCATC	7 cut(s)	186, 264, 610, 1007, 1249, 1840, 1945
MaeI	CTAG	2 cut(s)	690, 2081
MaeII	ACGT	3 cut(s)	92, 1462, 1478
MaeIII	GTNAC	5 cut(s)	349, 880, 1458, 1505, 1622
MalI	GATC	9 cut(s)	219, 741, 834, 846, 1148, 1414, 1500, 1527, 1950
MbiI	CCGCTC	1 cut(s)	1938
MboI	GATC	9 cut(s)	217, 739, 832, 844, 1146, 1412, 1498, 1525, 1948
MboII	GAAGA	2 cut(s)	405, 629
MflI	RGATCY	3 cut(s)	739, 844, 1412
MhlI	GDGCHC	3 cut(s)	315, 1109, 1200
MlsI	TGGCCA	1 cut(s)	1222
MluNI	TGGCCA	1 cut(s)	1222
Mly113I	GGCGCC	1 cut(s)	321
MlyI	GAGTC	4 cut(s)	570, 1026, 1571, 1699
MmeI	TCCRAC	2 cut(s)	249, 843
Mox20I	TGGCCA	1 cut(s)	1222
Mph1103I	ATGCAT	1 cut(s)	1246
MroNI	GCCGGC	1 cut(s)	1994
MscI	TGGCCA	1 cut(s)	1222
MseI	TTAA	7 cut(s)	110, 408, 449, 1287, 1475, 1761, 1926
MslI	CAYNNNNRTG	2 cut(s)	1245, 1842
Msp20I	TGGCCA	1 cut(s)	1222
MspA1I	CMGCKG	3 cut(s)	288, 614, 1743
MspCI	CTTAAG	1 cut(s)	109
MspI	CCGG	4 cut(s)	19, 460, 1995, 2025
MspR9I	CCNGG	3 cut(s)	20, 749, 2025
MvaI	CCWGG	1 cut(s)	749
MvnI	CGCG	4 cut(s)	78, 245, 266, 1973
MwoI	GCNNNNNNNGC	9 cut(s)	239, 267, 306, 409, 493, 620, 694, 1606, 2029
NaeI	GCCGGC	1 cut(s)	1996
NarI	GGCGCC	1 cut(s)	321
NciI	CCSGG	2 cut(s)	20, 2025
NdeI	CATATG	2 cut(s)	1246, 1988
NdeII	GATC	9 cut(s)	217, 739, 832, 844, 1146, 1412, 1498, 1525, 1948
NgoMIV	GCCGGC	1 cut(s)	1994
NlaIII	CATG	6 cut(s)	260, 274, 833, 1132, 1244, 1639
NlaIV	GGNNCC	2 cut(s)	262, 322
NmeAIII	GCCGAG	1 cut(s)	349
NmuCI	GTSAC	3 cut(s)	349, 880, 1622
NsiI	ATGCAT	1 cut(s)	1246
NspI	RCATGY	1 cut(s)	1639
PaeI	GCATGC	1 cut(s)	1639
PaeR7I	CTCGAG	1 cut(s)	894
PagI	TCATGA	1 cut(s)	829
PceI	AGGCCT	1 cut(s)	1380
PcsI	WCGNNNNNNNCGW	3 cut(s)	222, 321, 1434
PdiI	GCCGGC	1 cut(s)	1996
PfeI	GAWTC	7 cut(s)	421, 466, 1046, 1133, 1250, 1453, 1568
PflFI	GACNNNGTC	1 cut(s)	347
PflMI	CCANNNNNTGG	1 cut(s)	488
PkrI	GCNGC	4 cut(s)	244, 252, 473, 2011
PleI	GAGTC	4 cut(s)	569, 1025, 1570, 1699
PluTI	GGCGCC	1 cut(s)	324
PpsI	GAGTC	4 cut(s)	569, 1025, 1570, 1699
Ppu21I	YACGTR	2 cut(s)	93, 1463
PshBI	ATTAAT	1 cut(s)	1926
Psp6I	CCWGG	1 cut(s)	747
PspFI	CCCAGC	1 cut(s)	1743
PspGI	CCWGG	1 cut(s)	747
PspN4I	GGNNCC	2 cut(s)	262, 322
PspPI	GGNCC	3 cut(s)	457, 1281, 1607
PstNI	CAGNNNCTG	2 cut(s)	1049, 1262
PsuI	RGATCY	3 cut(s)	739, 844, 1412
PsyI	GACNNNGTC	1 cut(s)	347
PvuII	CAGCTG	1 cut(s)	614
RsaI	GTAC	3 cut(s)	500, 1481, 2066
RsaNI	GTAC	3 cut(s)	499, 1480, 2065
RseI	CAYNNNNRTG	2 cut(s)	1245, 1842
SaqAI	TTAA	7 cut(s)	110, 408, 449, 1287, 1475, 1761, 1926
SatI	GCNGC	4 cut(s)	243, 251, 472, 2010
Sau3AI	GATC	9 cut(s)	217, 739, 832, 844, 1146, 1412, 1498, 1525, 1948
Sau96I	GGNCC	3 cut(s)	457, 1281, 1607
SchI	GAGTC	4 cut(s)	570, 1026, 1571, 1699
ScrFI	CCNGG	3 cut(s)	20, 749, 2025
SduI	GDGCHC	3 cut(s)	315, 1109, 1200
SfaNI	GCATC	7 cut(s)	186, 264, 610, 1007, 1249, 1840, 1945
SfcI	CTRYAG	2 cut(s)	519, 948
SfoI	GGCGCC	1 cut(s)	322
Sfr274I	CTCGAG	1 cut(s)	894
SinI	GGWCC	1 cut(s)	457
SlaI	CTCGAG	1 cut(s)	894
SmiMI	CAYNNNNRTG	2 cut(s)	1245, 1842
SmlI	CTYRAG	2 cut(s)	109, 894
SmoI	CTYRAG	2 cut(s)	109, 894
SphI	GCATGC	1 cut(s)	1639
SseBI	AGGCCT	1 cut(s)	1380
SspDI	GGCGCC	1 cut(s)	320
SspI	AATATT	1 cut(s)	1179
SspMI	CTAG	2 cut(s)	690, 2081
StuI	AGGCCT	1 cut(s)	1380
StyD4I	CCNGG	3 cut(s)	18, 747, 2023
StyI	CCWWGG	2 cut(s)	689, 1603
TaaI	ACNGT	6 cut(s)	806, 1309, 1511, 1622, 1874, 2037
TaiI	ACGT	3 cut(s)	95, 1465, 1481
TaqI	TCGA	7 cut(s)	305, 464, 895, 1497, 1779, 1905, 1947
TatI	WGTACW	1 cut(s)	498
TauI	GCSGC	2 cut(s)	245, 474
TfiI	GAWTC	7 cut(s)	421, 466, 1046, 1133, 1250, 1453, 1568
Tru1I	TTAA	7 cut(s)	110, 408, 449, 1287, 1475, 1761, 1926
Tru9I	TTAA	7 cut(s)	110, 408, 449, 1287, 1475, 1761, 1926
TscAI	CASTG	5 cut(s)	139, 447, 811, 1596, 1965
TseFI	GTSAC	3 cut(s)	349, 880, 1622
TseI	GCWGC	2 cut(s)	250, 2009
Tsp45I	GTSAC	3 cut(s)	349, 880, 1622
TspDTI	ATGAA	5 cut(s)	818, 1117, 1676, 1912, 1944
TspGWI	ACGGA	6 cut(s)	467, 908, 951, 1222, 1677, 1812
TspRI	CASTG	5 cut(s)	139, 447, 811, 1596, 1965
Tth111I	GACNNNGTC	1 cut(s)	347
Van91I	CCANNNNNTGG	1 cut(s)	488
Vha464I	CTTAAG	1 cut(s)	109
VpaK11BI	GGWCC	1 cut(s)	457
VspI	ATTAAT	1 cut(s)	1926
XagI	CCTNNNNNAGG	1 cut(s)	379
XapI	RAATTY	8 cut(s)	114, 151, 887, 1298, 1361, 1612, 1769, 1775
XceI	RCATGY	1 cut(s)	1639
XcmI	CCANNNNNNNNNTGG	1 cut(s)	489
XhoI	CTCGAG	1 cut(s)	894
XmaJI	CCTAGG	1 cut(s)	689
XspI	CTAG	2 cut(s)	690, 2081
Zsp2I	ATGCAT	1 cut(s)	1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.