Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0004943

Physical Location & Seq

Genomic Coordinates Forward (+)

1355196 .. 1360029

Gene Structure 4834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g02230.17

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGTTAATAGAGAAACAATCTACTAAATATACTCTCAAATCGAAACTTTTATATTCAATTATAAAACGCTTAACTGTTTTTTTTTTTTTTTTAAATCAGAACAATACTAAGGCTCTAAGCCAAGCTATCCAACACGAGGAAAGAAGGAAGTCCATTACGCGCAATGTGGCACCCCTCGCCTTAAGAATTCTCCACGTCGACCCCACTGCCTTGCCCACTAAGGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTCGCTTTCTTTCTATCTATCTGCAAATCGTCGGTGATGCAAGAACCAGAGCTCCACGATCTGTCCGACGACGCCGATTACGCCGCGTCGCTGCGACACGGCTCGGCGAGCATGATGCGGAGCGATAGCGGGAAGCACAGCTCGTCGAGCGAGCATGACGGTGCCGAGGTGGTTTTCTTGAAAGACAATGTCACCATCCACCCCACTCAGTTCACCTCCGAGAGGATTAGTGGAAGATTGAGGCTAATTAAGCACGGCTCTTCTCTTTTCATGACGTGGATTCCGTACAACGGCCAAAACTCGAACGCTAGGGTGTCTGAGAAAGATAGAAATCTTTATACCATAAGGTCTGTGCCATTAACGGAGGTGCGGTCAATTCGTCGCCACACTCCAGCGCTTGGATGGCAGTACATTATCGTCGTTTTGGCGACAGGACTTGCATTTCCTCCTCTGTACTTCTACAATGGGGGAGTCAAAGAGTTCCTTGCTACAATAAAGCAACATGTTTTCCTTGTGAGGTCAGCTGAAGATGCAAATGTATTTCTGGTGAATGATTTTCAAAATCCTCTCCAGAGAACTCTATCGTCTTTGGAGTTGCCTAGGGCTCTTTCTGTTGCAAGTGGGCAATCTACATTAGTCTCAGTTGGCGAGACCTCTTCAGATGAAAACCAGGAGAGAACAAGTGGGTATGTTCAAGACGGAAGTTTAAGCATTTCTCAATACAATGAGAGGCAAAGGCAAAGGATTCATGATCCTGCACGAGATCTCTCAATTCAAGTGTTGGAAAAGTTCTCTCTCGTGACCAAATTTGCTCGAGAAACAACTTCTCAACTTTTCCGTGATAATCATAGTAACGGATATGGTGCTATAGAAAGGAGAAGTAATAACCAGTCTCCCATTGATTACCCTCAGAAGGCGTCCCATGATTCAAACAGAGCCCCTGAGAAAAGTCCTGTCCCCCCAGATTCCCTGGAGAAAAGTTTGATAAAGAATCAATGGTATGGGGAAAACCACGACAGCCACCTTTGGGCTCTGATGAGTGGGAAGCTTTCTTTGATTCTGAAGGTAGGATCGATCGACTCAGAAGCTTTCAGAAAGAGAATATTTTATGGGGGAGTTGAGCACAAACTACGGAAAGAGGTGTGGCCCTTCTTGTTGGGATACCATGCATTTGATTCAACAGATGCTGAGAGGGAATACCTTAGGGCCGTTAAAAAGTCAGAATTTGAAACCATAAAGAAGCAATGGCAGAGTATCTCCCCGGAACAGGCCAAAAGATTTACAAAATTCAGGGAGAGAAAAGGCCTCATTGAGAAAGATGTGGTAAGGACTGACAGATCTCTCTCCTACTACGATGGGGATGATAATCCAAATGTGAATCTGTTACGTGATATACTCTTAACGTACTCATTTTACAACTTCGATCTTGGTTACTGTCAGGGTATGAGTGATCTCCTGTCCCCAATATTGTATGTAATGGAGGATGAGTCCGAATCGTTTTGGTGTTTTGTTTCACTGATGGAGCGCCTTGGGCCCAATTTCAACCGTGACCAAAGTGGCATGCACTCTCAACTTTTTGCAGTAACTAAGTTGGTGGAGTTGTTAGACGTTCCGTTGCACAATCACTTTACTCAGAAGGACTGCTTGAATTACTTCTTTTGTTTCCGCTGGGTTCTAATACAATTTAAAAGGGAATTTGAATTCGACAAAACAATGCGCTTGTGGGAGATATTGTGGACGCATTATCCGTCTGAGCACCTGCACCTGTACGTCTGTGTGGCGATATTGAAGCGACACCGTAGTAAGATAATTGGGGAGCAAATGGACTTTGACACTCTATTGAAGTTCATCAATGAACTGAGCGGTCATATCGATCTTGATGCCGTGGTCAGGGATGCAGAGGCTCTGTGCATATGTGCCGGCGAGAATGGTGCTGCTTCCATTCCACCGGGAACTCCGCCGTCATTGCCTGTTGATGATGTGTTATTGTACCCTCAACAAGAACTAGACGACATATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUF3548 RabGAP-TBC

Protein Analysis

761

Amino Acids

87.07

Weight (kDa)

6.7

Isoelectric Point (pI)

47.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52580 AT5G52580 AT5G52580
fragaria_vesca	FvH4_1g02680
malus_domestica	MD02G1027400.v1.1 MD15G1168800.v1.1
prunus_persica	Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1
pyrus_communis	pycom02g02230 pycom15g15050
rosa_chinensis	RchiOBHm_Chr2g0087771 RchiOBHm_Chr7g0194011
rosa_laevigata	RLG00000004223 RLG00000015897
rosa_multiflora	Rmu_sc0021871.1_g000005
rosa_roxburghii	Rroxscaffold_2G00153250 Rroxscaffold_3G00261620
rosa_rugosa	Rorug01G0478700 Rorug07G0013200
rosa_samantha	Rh2AG032900 Rh2CG032700 Rh2DG032500 Rh7AG140400 Rh7BG140900 Rh7CG144400 Rh7DG141700
rosa_wichuraiana	Rw2G002560 Rw7G011980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	62
AarI	CACCTGC	1 cut(s)	2028
Acc36I	ACCTGC	1 cut(s)	2028
AccB1I	GGYRCC	2 cut(s)	169, 422
AccB7I	CCANNNNNTGG	1 cut(s)	659
AccBSI	CCGCTC	1 cut(s)	2124
AccI	GTMKAC	1 cut(s)	198
AccII	CGCG	2 cut(s)	160, 347
AciI	CCGC	7 cut(s)	345, 379, 390, 631, 1927, 2124, 2219
AclWI	GGATC	2 cut(s)	1007, 1339
AcoI	YGGCCR	1 cut(s)	553
AcsI	RAATTY	6 cut(s)	186, 1067, 1484, 1547, 1955, 1961
AcuI	CTGAAG	3 cut(s)	807, 903, 1343
AcyI	GRCGYC	2 cut(s)	333, 1178
AfaI	GTAC	6 cut(s)	548, 671, 716, 1667, 2030, 2252
AfeI	AGCGCT	1 cut(s)	657
AfiI	CCNNNNNNNGG	8 cut(s)	136, 483, 551, 659, 1174, 1288, 1528, 2151
AflII	CTTAAG	1 cut(s)	181
AflIII	ACRYGT	1 cut(s)	763
AjiI	CACGTC	2 cut(s)	196, 537
AjnI	CCWGG	2 cut(s)	930, 1230
AloI	GAACNNNNNNTCC	2 cut(s)	297, 329
AluBI	AGCT	6 cut(s)	125, 313, 402, 785, 1309, 1349
AluI	AGCT	6 cut(s)	125, 313, 402, 785, 1309, 1349
Alw21I	GWGCWC	3 cut(s)	315, 1386, 2019
Alw26I	GTCTC	3 cut(s)	904, 905, 1158
AlwI	GGATC	2 cut(s)	1007, 1339
AlwNI	CAGNNNCTG	1 cut(s)	1448
Ama87I	CYCGRG	1 cut(s)	1074
Aor51HI	AGCGCT	1 cut(s)	657
AoxI	GGCC	6 cut(s)	553, 1406, 1467, 1530, 1564, 1793
ApaI	GGGCCC	1 cut(s)	1797
ApeKI	GCWGC	2 cut(s)	352, 2195
ApoI	RAATTY	6 cut(s)	186, 1067, 1484, 1547, 1955, 1961
Asp700I	GAANNNNTTC	1 cut(s)	1913
AspA2I	CCTAGG	1 cut(s)	860
AspLEI	GCGC	4 cut(s)	162, 658, 1788, 1980
AspS9I	GGNCC	4 cut(s)	1407, 1467, 1793, 1794
AsuC2I	CCSGG	2 cut(s)	1523, 2211
AsuHPI	GGTGA	4 cut(s)	307, 445, 466, 820
AvaI	CYCGRG	1 cut(s)	1074
AvrII	CCTAGG	1 cut(s)	860
AxyI	CCTNAGG	1 cut(s)	1463
BaeGI	GKGCMC	1 cut(s)	1797
BanI	GGYRCC	2 cut(s)	169, 422
BanII	GRGCYC	5 cut(s)	315, 868, 1201, 1294, 1797
BauI	CACGAG	3 cut(s)	134, 1020, 1058
Bbv12I	GWGCWC	3 cut(s)	315, 1386, 2019
BbvI	GCAGC	2 cut(s)	339, 2182
BccI	CCATC	4 cut(s)	464, 657, 1610, 1774
BceAI	ACGGC	6 cut(s)	376, 532, 568, 1454, 2129, 2206
BcgI	CGANNNNNNTGC	8 cut(s)	188, 222, 358, 392, 2123, 2157, 2174, 2208
BciT130I	CCWGG	2 cut(s)	932, 1232
BciVI	GTATCC	1 cut(s)	1415
BcnI	CCSGG	2 cut(s)	1523, 2211
BcoDI	GTCTC	3 cut(s)	904, 905, 1158
BfaI	CTAG	3 cut(s)	570, 861, 2267
BfmI	CTRYAG	1 cut(s)	1128
BfoI	RGCGCY	2 cut(s)	659, 1789
BfrI	CTTAAG	1 cut(s)	181
BfuAI	ACCTGC	1 cut(s)	2028
BfuI	GTATCC	1 cut(s)	1415
BglII	AGATCT	2 cut(s)	1024, 1598
BisI	GCNGC	3 cut(s)	345, 353, 2196
BlnI	CCTAGG	1 cut(s)	860
BlsI	GCNGC	3 cut(s)	346, 354, 2197
Bme1390I	CCNGG	4 cut(s)	932, 1232, 1523, 2211
BmeT110I	CYCGRG	1 cut(s)	1074
BmgBI	CACGTC	2 cut(s)	196, 537
BmgT120I	GGNCC	4 cut(s)	1407, 1467, 1793, 1794
BmiI	GGNNCC	3 cut(s)	171, 424, 1795
BmrFI	CCNGG	4 cut(s)	932, 1232, 1523, 2211
BmsI	GCATC	6 cut(s)	288, 366, 781, 1435, 2131, 2146
BpmI	CTGGAG	3 cut(s)	636, 815, 1253
BpuMI	CCSGG	2 cut(s)	1523, 2211
Bsa29I	ATCGAT	2 cut(s)	1334, 2133
BsaAI	YACGTR	1 cut(s)	1649
BsaBI	GATNNNNATC	2 cut(s)	591, 1626
BsaHI	GRCGYC	2 cut(s)	333, 1178
BsaI	GGTCTC	1 cut(s)	905
BsaJI	CCNNGG	6 cut(s)	426, 860, 1230, 1521, 1789, 2145
BsaXI	ACNNNNNCTCC	8 cut(s)	297, 327, 617, 647, 1733, 1763, 1979, 2009
Bsc4I	CCNNNNNNNGG	8 cut(s)	136, 483, 551, 659, 1174, 1288, 1528, 2151
Bse118I	RCCGGY	1 cut(s)	2180
Bse1I	ACTGG	1 cut(s)	1150
Bse21I	CCTNAGG	1 cut(s)	1463
Bse3DI	GCAATG	3 cut(s)	169, 1511, 2225
Bse8I	GATNNNNATC	2 cut(s)	591, 1626
BseBI	CCWGG	2 cut(s)	932, 1232
BseCI	ATCGAT	2 cut(s)	1334, 2133
BseDI	CCNNGG	6 cut(s)	426, 860, 1230, 1521, 1789, 2145
BseGI	GGATG	5 cut(s)	456, 668, 1627, 1750, 2161
BseJI	GATNNNNATC	2 cut(s)	591, 1626
BseLI	CCNNNNNNNGG	8 cut(s)	136, 483, 551, 659, 1174, 1288, 1528, 2151
BseMI	GCAATG	3 cut(s)	169, 1511, 2225
BseNI	ACTGG	1 cut(s)	1150
BseRI	GAGGAG	1 cut(s)	699
BseSI	GKGCMC	1 cut(s)	1797
BseXI	GCAGC	2 cut(s)	339, 2182
BseYI	CCCAGC	1 cut(s)	1929
BsgI	GTGCAG	2 cut(s)	1002, 2006
Bsh1236I	CGCG	2 cut(s)	160, 347
Bsh1285I	CGRYCG	1 cut(s)	1338
BshFI	GGCC	6 cut(s)	555, 1408, 1469, 1532, 1566, 1795
BshNI	GGYRCC	2 cut(s)	169, 422
BshVI	ATCGAT	2 cut(s)	1334, 2133
BsiEI	CGRYCG	1 cut(s)	1338
BsiHKAI	GWGCWC	3 cut(s)	315, 1386, 2019
BsiHKCI	CYCGRG	1 cut(s)	1074
BsiSI	CCGG	3 cut(s)	1523, 2181, 2210
BslFI	GGGAC	3 cut(s)	1165, 1202, 1705
BslI	CCNNNNNNNGG	8 cut(s)	136, 483, 551, 659, 1174, 1288, 1528, 2151
BsmAI	GTCTC	3 cut(s)	904, 905, 1158
BsmFI	GGGAC	3 cut(s)	1165, 1202, 1705
BsnI	GGCC	6 cut(s)	555, 1408, 1469, 1532, 1566, 1795
Bso31I	GGTCTC	1 cut(s)	905
BsoBI	CYCGRG	1 cut(s)	1074
Bsp120I	GGGCCC	1 cut(s)	1793
Bsp1286I	GDGCHC	7 cut(s)	315, 868, 1201, 1294, 1386, 1797, 2019
Bsp143I	GATC	9 cut(s)	319, 1012, 1024, 1331, 1335, 1598, 1684, 1711, 2134
BspACI	CCGC	7 cut(s)	345, 379, 390, 631, 1927, 2124, 2219
BspANI	GGCC	6 cut(s)	555, 1408, 1469, 1532, 1566, 1795
BspDI	ATCGAT	2 cut(s)	1334, 2133
BspFNI	CGCG	2 cut(s)	160, 347
BspHI	TCATGA	2 cut(s)	531, 1009
BspLI	GGNNCC	3 cut(s)	171, 424, 1795
BspMI	ACCTGC	1 cut(s)	2028
BspPI	GGATC	2 cut(s)	1007, 1339
BspQI	GCTCTTC	1 cut(s)	526
BspT107I	GGYRCC	2 cut(s)	169, 422
BspTI	CTTAAG	1 cut(s)	181
BspTNI	GGTCTC	1 cut(s)	905
BsrBI	CCGCTC	1 cut(s)	2124
BsrDI	GCAATG	3 cut(s)	169, 1511, 2225
BsrFI	RCCGGY	1 cut(s)	2180
BsrI	ACTGG	1 cut(s)	1150
BssAI	RCCGGY	1 cut(s)	2180
BssECI	CCNNGG	6 cut(s)	426, 860, 1230, 1521, 1789, 2145
BssMI	GATC	9 cut(s)	319, 1012, 1024, 1331, 1335, 1598, 1684, 1711, 2134
BssNI	GRCGYC	2 cut(s)	333, 1178
BssSI	CACGAG	3 cut(s)	134, 1020, 1058
BssT1I	CCWWGG	2 cut(s)	860, 1789
Bst2BI	CACGAG	3 cut(s)	134, 1020, 1058
Bst2UI	CCWGG	2 cut(s)	932, 1232
Bst4CI	ACNGT	5 cut(s)	76, 422, 1697, 1808, 2060
Bst6I	CTCTTC	2 cut(s)	526, 922
BstACI	GRCGYC	2 cut(s)	333, 1178
BstAFI	CTTAAG	1 cut(s)	181
BstBAI	YACGTR	1 cut(s)	1649
BstC8I	GCNNGC	4 cut(s)	370, 413, 1823, 2182
BstDSI	CCRYGG	1 cut(s)	2145
BstENI	CCTNNNNNAGG	1 cut(s)	481
BstF5I	GGATG	5 cut(s)	456, 668, 1627, 1750, 2161
BstFNI	CGCG	2 cut(s)	160, 347
BstH2I	RGCGCY	2 cut(s)	659, 1789
BstHHI	GCGC	4 cut(s)	162, 658, 1788, 1980
BstKTI	GATC	9 cut(s)	322, 1015, 1027, 1334, 1338, 1601, 1687, 1714, 2137
BstMAI	GTCTC	3 cut(s)	904, 905, 1158
BstMBI	GATC	9 cut(s)	319, 1012, 1024, 1331, 1335, 1598, 1684, 1711, 2134
BstMCI	CGRYCG	1 cut(s)	1338
BstMWI	GCNNNNNNNGC	9 cut(s)	176, 341, 369, 408, 511, 664, 791, 1792, 2227
BstNI	CCWGG	2 cut(s)	932, 1232
BstNSI	RCATGY	2 cut(s)	767, 1825
BstSCI	CCNGG	4 cut(s)	930, 1230, 1521, 2209
BstSFI	CTRYAG	1 cut(s)	1128
BstSLI	GKGCMC	1 cut(s)	1797
BstUI	CGCG	2 cut(s)	160, 347
BstV1I	GCAGC	2 cut(s)	339, 2182
BstX2I	RGATCY	2 cut(s)	1024, 1598
BstYI	RGATCY	2 cut(s)	1024, 1598
Bsu15I	ATCGAT	2 cut(s)	1334, 2133
Bsu36I	CCTNAGG	1 cut(s)	1463
BsuI	GTATCC	1 cut(s)	1415
BsuRI	GGCC	6 cut(s)	555, 1408, 1469, 1532, 1566, 1795
BsuTUI	ATCGAT	2 cut(s)	1334, 2133
BtgI	CCRYGG	1 cut(s)	2145
BtrI	CACGTC	2 cut(s)	196, 537
BtsCI	GGATG	5 cut(s)	456, 668, 1627, 1750, 2161
BtsI	GCAGTG	1 cut(s)	204
BtsIMutI	CAGTG	2 cut(s)	204, 1775
BveI	ACCTGC	1 cut(s)	2028
Cac8I	GCNNGC	4 cut(s)	370, 413, 1823, 2182
CaiI	CAGNNNCTG	1 cut(s)	1448
CciI	TCATGA	2 cut(s)	531, 1009
CfoI	GCGC	4 cut(s)	162, 658, 1788, 1980
Cfr10I	RCCGGY	1 cut(s)	2180
Cfr13I	GGNCC	4 cut(s)	1407, 1467, 1793, 1794
ClaI	ATCGAT	2 cut(s)	1334, 2133
CseI	GACGC	4 cut(s)	336, 341, 1167, 2008
Csp6I	GTAC	6 cut(s)	547, 670, 715, 1666, 2029, 2251
CviAII	CATG	8 cut(s)	373, 416, 532, 764, 1010, 1184, 1427, 1822
CviQI	GTAC	6 cut(s)	547, 670, 715, 1666, 2029, 2251
DpnI	GATC	9 cut(s)	321, 1014, 1026, 1333, 1337, 1600, 1686, 1713, 2136
DpnII	GATC	9 cut(s)	319, 1012, 1024, 1331, 1335, 1598, 1684, 1711, 2134
DraI	TTTAAA	2 cut(s)	93, 1948
EaeI	YGGCCR	1 cut(s)	553
Eam1104I	CTCTTC	2 cut(s)	526, 922
EarI	CTCTTC	2 cut(s)	526, 922
EciI	GGCGGA	1 cut(s)	2208
Ecl136II	GAGCTC	1 cut(s)	313
Eco130I	CCWWGG	2 cut(s)	860, 1789
Eco147I	AGGCCT	1 cut(s)	1566
Eco24I	GRGCYC	5 cut(s)	315, 868, 1201, 1294, 1797
Eco31I	GGTCTC	1 cut(s)	905
Eco47III	AGCGCT	1 cut(s)	657
Eco53kI	GAGCTC	1 cut(s)	313
Eco57I	CTGAAG	3 cut(s)	807, 903, 1343
Eco81I	CCTNAGG	1 cut(s)	1463
Eco88I	CYCGRG	1 cut(s)	1074
EcoICRI	GAGCTC	1 cut(s)	313
EcoNI	CCTNNNNNAGG	1 cut(s)	481
EcoRI	GAATTC	2 cut(s)	186, 1961
EcoRII	CCWGG	2 cut(s)	930, 1230
EcoT14I	CCWWGG	2 cut(s)	860, 1789
EcoT22I	ATGCAT	1 cut(s)	1432
EcoT38I	GRGCYC	5 cut(s)	315, 868, 1201, 1294, 1797
ErhI	CCWWGG	2 cut(s)	860, 1789
FaeI	CATG	8 cut(s)	376, 419, 535, 767, 1013, 1187, 1430, 1825
FalI	AAGNNNNNCTT	4 cut(s)	729, 761, 1889, 1921
FaqI	GGGAC	3 cut(s)	1165, 1202, 1705
FatI	CATG	8 cut(s)	372, 415, 531, 763, 1009, 1183, 1426, 1821
FauI	CCCGC	1 cut(s)	383
FauNDI	CATATG	1 cut(s)	2174
FblI	GTMKAC	1 cut(s)	198
Fnu4HI	GCNGC	3 cut(s)	345, 353, 2196
FokI	GGATG	5 cut(s)	443, 675, 1634, 1757, 2168
FriOI	GRGCYC	5 cut(s)	315, 868, 1201, 1294, 1797
Fsp4HI	GCNGC	3 cut(s)	345, 353, 2196
FspBI	CTAG	3 cut(s)	570, 861, 2267
GlaI	GCGC	4 cut(s)	161, 657, 1787, 1979
GluI	GCNGC	3 cut(s)	345, 353, 2196
GsaI	CCCAGC	1 cut(s)	1933
GsuI	CTGGAG	3 cut(s)	636, 815, 1253
HaeII	RGCGCY	2 cut(s)	659, 1789
HaeIII	GGCC	6 cut(s)	555, 1408, 1469, 1532, 1566, 1795
HapII	CCGG	3 cut(s)	1523, 2181, 2210
HgaI	GACGC	4 cut(s)	336, 341, 1167, 2008
HhaI	GCGC	4 cut(s)	162, 658, 1788, 1980
Hin1I	GRCGYC	2 cut(s)	333, 1178
Hin1II	CATG	8 cut(s)	376, 419, 535, 767, 1013, 1187, 1430, 1825
Hin6I	GCGC	4 cut(s)	160, 656, 1786, 1978
HinP1I	GCGC	4 cut(s)	160, 656, 1786, 1978
HincII	GTYRAC	1 cut(s)	199
HindII	GTYRAC	1 cut(s)	199
HindIII	AAGCTT	2 cut(s)	1307, 1347
HpaII	CCGG	3 cut(s)	1523, 2181, 2210
HphI	GGTGA	4 cut(s)	307, 445, 466, 820
Hpy166II	GTNNAC	3 cut(s)	199, 474, 1998
Hpy188III	TCNNGA	8 cut(s)	439, 532, 832, 956, 1010, 1060, 1076, 2138
Hpy8I	GTNNAC	3 cut(s)	199, 474, 1998
Hpy99I	CGWCG	8 cut(s)	200, 295, 332, 335, 352, 409, 645, 683
HpyAV	CCTTC	5 cut(s)	138, 1168, 1318, 1420, 1891
HpyCH4III	ACNGT	5 cut(s)	76, 422, 1697, 1808, 2060
HpyCH4IV	ACGT	6 cut(s)	195, 536, 1648, 1664, 1869, 2031
HpyF10VI	GCNNNNNNNGC	9 cut(s)	176, 341, 369, 408, 511, 664, 791, 1792, 2227
HpySE526I	ACGT	6 cut(s)	195, 536, 1648, 1664, 1869, 2031
Hsp92I	GRCGYC	2 cut(s)	333, 1178
Hsp92II	CATG	8 cut(s)	376, 419, 535, 767, 1013, 1187, 1430, 1825
HspAI	GCGC	4 cut(s)	160, 656, 1786, 1978
KroI	GCCGGC	1 cut(s)	2180
KroNI	GCCGGC	1 cut(s)	2182
Kzo9I	GATC	9 cut(s)	319, 1012, 1024, 1331, 1335, 1598, 1684, 1711, 2134
LguI	GCTCTTC	1 cut(s)	526
LmnI	GCTCC	4 cut(s)	318, 381, 1783, 2077
Lsp1109I	GCAGC	2 cut(s)	339, 2182
LweI	GCATC	6 cut(s)	288, 366, 781, 1435, 2131, 2146
MaeI	CTAG	3 cut(s)	570, 861, 2267
MaeII	ACGT	6 cut(s)	195, 536, 1648, 1664, 1869, 2031
MaeIII	GTNAC	7 cut(s)	451, 1060, 1112, 1644, 1691, 1808, 1843
MalI	GATC	9 cut(s)	321, 1014, 1026, 1333, 1337, 1600, 1686, 1713, 2136
MbiI	CCGCTC	1 cut(s)	2124
MboI	GATC	9 cut(s)	319, 1012, 1024, 1331, 1335, 1598, 1684, 1711, 2134
MboII	GAAGA	4 cut(s)	507, 513, 800, 909
MflI	RGATCY	2 cut(s)	1024, 1598
MhlI	GDGCHC	7 cut(s)	315, 868, 1201, 1294, 1386, 1797, 2019
MlyI	GAGTC	3 cut(s)	741, 1334, 1757
MmeI	TCCRAC	3 cut(s)	154, 351, 1023
Mph1103I	ATGCAT	1 cut(s)	1432
MroNI	GCCGGC	1 cut(s)	2180
MroXI	GAANNNNTTC	1 cut(s)	1913
MslI	CAYNNNNRTG	1 cut(s)	420
MspA1I	CMGCKG	2 cut(s)	785, 1929
MspCI	CTTAAG	1 cut(s)	181
MspI	CCGG	3 cut(s)	1523, 2181, 2210
MspR9I	CCNGG	4 cut(s)	932, 1232, 1523, 2211
MvaI	CCWGG	2 cut(s)	932, 1232
MvnI	CGCG	2 cut(s)	160, 347
MwoI	GCNNNNNNNGC	9 cut(s)	176, 341, 369, 408, 511, 664, 791, 1792, 2227
NaeI	GCCGGC	1 cut(s)	2182
NciI	CCSGG	2 cut(s)	1523, 2211
NdeI	CATATG	1 cut(s)	2174
NdeII	GATC	9 cut(s)	319, 1012, 1024, 1331, 1335, 1598, 1684, 1711, 2134
NgoMIV	GCCGGC	1 cut(s)	2180
NlaIII	CATG	8 cut(s)	376, 419, 535, 767, 1013, 1187, 1430, 1825
NlaIV	GGNNCC	3 cut(s)	171, 424, 1795
NmeAIII	GCCGAG	2 cut(s)	344, 451
NmuCI	GTSAC	3 cut(s)	451, 1060, 1808
NsiI	ATGCAT	1 cut(s)	1432
NspI	RCATGY	2 cut(s)	767, 1825
PaeI	GCATGC	1 cut(s)	1825
PaeR7I	CTCGAG	1 cut(s)	1074
PagI	TCATGA	2 cut(s)	531, 1009
PaqCI	CACCTGC	1 cut(s)	2028
PceI	AGGCCT	1 cut(s)	1566
PciI	ACATGT	1 cut(s)	763
PciSI	GCTCTTC	1 cut(s)	526
PcsI	WCGNNNNNNNCGW	3 cut(s)	324, 542, 2006
PdiI	GCCGGC	1 cut(s)	2182
PdmI	GAANNNNTTC	1 cut(s)	1913
PflFI	GACNNNGTC	1 cut(s)	449
PflMI	CCANNNNNTGG	1 cut(s)	659
PkrI	GCNGC	3 cut(s)	346, 354, 2197
Ple19I	CGATCG	1 cut(s)	1338
PleI	GAGTC	3 cut(s)	740, 1334, 1756
PpsI	GAGTC	3 cut(s)	740, 1334, 1756
Ppu21I	YACGTR	1 cut(s)	1649
PscI	ACATGT	1 cut(s)	763
PsiI	TTATAA	1 cut(s)	62
Psp124BI	GAGCTC	1 cut(s)	315
Psp6I	CCWGG	2 cut(s)	930, 1230
PspFI	CCCAGC	1 cut(s)	1929
PspGI	CCWGG	2 cut(s)	930, 1230
PspN4I	GGNNCC	3 cut(s)	171, 424, 1795
PspOMI	GGGCCC	1 cut(s)	1793
PspPI	GGNCC	4 cut(s)	1407, 1467, 1793, 1794
PstNI	CAGNNNCTG	1 cut(s)	1448
PsuI	RGATCY	2 cut(s)	1024, 1598
PsyI	GACNNNGTC	1 cut(s)	449
PvuI	CGATCG	1 cut(s)	1338
PvuII	CAGCTG	1 cut(s)	785
RsaI	GTAC	6 cut(s)	548, 671, 716, 1667, 2030, 2252
RsaNI	GTAC	6 cut(s)	547, 670, 715, 1666, 2029, 2251
RseI	CAYNNNNRTG	1 cut(s)	420
SacI	GAGCTC	1 cut(s)	315
SalI	GTCGAC	1 cut(s)	197
SapI	GCTCTTC	1 cut(s)	526
SatI	GCNGC	3 cut(s)	345, 353, 2196
Sau3AI	GATC	9 cut(s)	319, 1012, 1024, 1331, 1335, 1598, 1684, 1711, 2134
Sau96I	GGNCC	4 cut(s)	1407, 1467, 1793, 1794
SchI	GAGTC	3 cut(s)	741, 1334, 1757
ScrFI	CCNGG	4 cut(s)	932, 1232, 1523, 2211
SduI	GDGCHC	7 cut(s)	315, 868, 1201, 1294, 1386, 1797, 2019
SfaNI	GCATC	6 cut(s)	288, 366, 781, 1435, 2131, 2146
SfcI	CTRYAG	1 cut(s)	1128
Sfr274I	CTCGAG	1 cut(s)	1074
SlaI	CTCGAG	1 cut(s)	1074
SmiMI	CAYNNNNRTG	1 cut(s)	420
SmlI	CTYRAG	2 cut(s)	181, 1074
SmoI	CTYRAG	2 cut(s)	181, 1074
SphI	GCATGC	1 cut(s)	1825
SseBI	AGGCCT	1 cut(s)	1566
SsiI	CCGC	7 cut(s)	345, 379, 390, 631, 1927, 2124, 2219
SspI	AATATT	2 cut(s)	1365, 1728
SspMI	CTAG	3 cut(s)	570, 861, 2267
SstI	GAGCTC	1 cut(s)	315
StuI	AGGCCT	1 cut(s)	1566
StyD4I	CCNGG	4 cut(s)	930, 1230, 1521, 2209
StyI	CCWWGG	2 cut(s)	860, 1789
TaaI	ACNGT	5 cut(s)	76, 422, 1697, 1808, 2060
TaiI	ACGT	6 cut(s)	198, 539, 1651, 1667, 1872, 2034
TatI	WGTACW	2 cut(s)	669, 714
TauI	GCSGC	1 cut(s)	347
TscAI	CASTG	2 cut(s)	211, 1782
TseFI	GTSAC	3 cut(s)	451, 1060, 1808
TseI	GCWGC	2 cut(s)	352, 2195
Tsp45I	GTSAC	3 cut(s)	451, 1060, 1808
TspDTI	ATGAA	5 cut(s)	520, 939, 998, 2098, 2130
TspGWI	ACGGA	8 cut(s)	534, 638, 975, 1088, 1131, 1408, 1863, 1998
TspRI	CASTG	2 cut(s)	211, 1782
Tth111I	GACNNNGTC	1 cut(s)	449
Van91I	CCANNNNNTGG	1 cut(s)	659
Vha464I	CTTAAG	1 cut(s)	181
XagI	CCTNNNNNAGG	1 cut(s)	481
XapI	RAATTY	6 cut(s)	186, 1067, 1484, 1547, 1955, 1961
XceI	RCATGY	2 cut(s)	767, 1825
XcmI	CCANNNNNNNNNTGG	1 cut(s)	660
XhoI	CTCGAG	1 cut(s)	1074
XmaJI	CCTAGG	1 cut(s)	860
XmiI	GTMKAC	1 cut(s)	198
XmnI	GAANNNNTTC	1 cut(s)	1913
XspI	CTAG	3 cut(s)	570, 861, 2267
Zsp2I	ATGCAT	1 cut(s)	1432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.