Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0004943

Physical Location & Seq

Genomic Coordinates Reverse (-)

57368842 .. 57370359

Gene Structure 1518 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004223

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGCAGGAACTGGAGCTCCACGACCTCTCTGACAATGCCGAGGTGGTTTACATGAAGGATAATGTGAGCATCCACCACGCCATGCTTGCATCAGAGAGGATTAGTGGACGATTAAGGCTAATCAAGAAGGGCTCTTGTCTATTCATGACATGGATTCCGTACTCAAACGCCATGGTTTGTGAGAAAGATAGAATTGTTTATAGTATAAGGGAGGTGCCATTGACAGAGGTTCGGTCCATTCGACGCCACACTGGATGGCAGTACATTATCGTCGTTTTGGCATCTGGACTTGCGCTTCCCCCACTCTACCTGTACAACGGAGGAGTCAAGGAGTTCCTTGCTACAATTAAGCAGCACGTGTCTATTGTGATATCAGCTGAGGATGATAATGTATTTCTTGTCAATGATTTTCAAAATCCTCTAACAACTATAATTTCGAGGCAAAGGCAAAAGGTTCATGATCATCATGCACGAGATATCTCGATTCAAGTGTTGGAAAAATTCTCTCTCGTGACGAAATTTGCTCGAGAAAAAACTTGGCAACCCTTATGTGATTCGAACAACATCGACTCTGATAAAAGTCCAGTCTTGTCACCTTTGGGGTGTGATGAGTGGTACACCTTGTTGGATTCTCAAGGGCGGATCATGGATTCAGAAGCTTTAAGAAAGAGAGTATTTTATGGGGGAGTTGAGCACAAATTACGGAAAGAGGTCTGGCCATTCTTGCTGGGACACTATGCATATGATTCAACATATACAGAGAGGGAGTATGTTAAGGCAATGAAGAAGACAGAGTTTGAGACACTAAAGAAGCAATGGCGGAGTATCTCCCCAGAGCAGAGGATTATTGACACAGATGTGGTGAGGACCGACAGATGTCTCTCCTTCTACAATGGGGATGATAATCCAAATGTGGGTCTGTTGCATGACATATTGTTAACATACTCGTTTTACAACTTCGATCTTGGTTACTGTCAGGGTATGAGTGATCTTCTGTCCCCAATATTGTTTGTACTGGGGGATGAGTCAGAATCATTTTGGTGTTTTGCTAAACTGATGGAGCGCCTTGGCCTCAATTTTGACCGTGACCAAAAAGGCATCGACTCTCAAATTCTTGCTTTAACTATGTTGGTGGAGTTGTTAGACAGACCATTGCATAATTACTTCAAACAGCGTAACTGCTTGGAGTACCTCTTTTGTTACCGCTGGGTTCTGTTACAGTTCAAAAGGGAATTTGAATTCGACAAGACATTGAGATTATGGGAGGCTCTGTGGACACATTATCCATCTGAGCACCTGCACTTGTATGTGTGTGTTGCGATACTCAAGCGATACCGCAGTAAGATCATTGGGGAGCAGATGGATAAAGACACTCTATTGAAATTCATCAATGAACTGAGTGGTCAAATAAATCTTGATGGCCTTGTGAGGGATGCAGAAGCTTTGTGGATACGTGCTGGTGAGAAAGGTGATGCTTGCATTCCACCTGGAACTCCACCCTCACTGCCGGCCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUF3548 RabGAP-TBC

Protein Analysis

506

Amino Acids

58.88

Weight (kDa)

6.13

Isoelectric Point (pI)

43.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_RBD	PF12068	15 - 143	2.4e-08	Rab-binding domain (RBD)
RabGAP-TBC	PF00566	232 - 450	7.9e-47	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	308 - 465	2e-12	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52580 AT5G52580 AT5G52580
fragaria_vesca	FvH4_1g02680
malus_domestica	MD02G1027400.v1.1 MD15G1168800.v1.1
prunus_persica	Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1
pyrus_communis	pycom02g02230 pycom15g15050
rosa_chinensis	RchiOBHm_Chr2g0087771 RchiOBHm_Chr7g0194011
rosa_laevigata	RLG00000004223 RLG00000015897
rosa_multiflora	Rmu_sc0021871.1_g000005
rosa_roxburghii	Rroxscaffold_2G00153250 Rroxscaffold_3G00261620
rosa_rugosa	Rorug01G0478700 Rorug07G0013200
rosa_samantha	Rh2AG032900 Rh2CG032700 Rh2DG032500 Rh7AG140400 Rh7BG140900 Rh7CG144400 Rh7DG141700
rosa_wichuraiana	Rw2G002560 Rw7G011980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1305
Acc36I	ACCTGC	1 cut(s)	1305
AccB1I	GGYRCC	1 cut(s)	214
AciI	CCGC	4 cut(s)	640, 820, 1204, 1336
AclWI	GGATC	1 cut(s)	650
AcoI	YGGCCR	1 cut(s)	716
AcsI	RAATTY	6 cut(s)	500, 518, 1110, 1232, 1238, 1382
AcvI	CACGTG	1 cut(s)	358
AcyI	GRCGYC	1 cut(s)	244
AfaI	GTAC	6 cut(s)	161, 263, 314, 617, 1014, 1190
AfiI	CCNNNNNNNGG	2 cut(s)	914, 1429
AflIII	ACRYGT	1 cut(s)	357
AgsI	TTSAA	7 cut(s)	413, 488, 750, 1168, 1225, 1238, 1381
AjnI	CCWGG	2 cut(s)	1486, 1511
AleI	CACNNNNGTG	1 cut(s)	857
AloI	GAACNNNNNNTCC	1 cut(s)	32
AluBI	AGCT	4 cut(s)	16, 377, 659, 1442
AluI	AGCT	4 cut(s)	16, 377, 659, 1442
Alw21I	GWGCWC	3 cut(s)	18, 696, 1296
Alw26I	GTCTC	2 cut(s)	794, 884
AlwI	GGATC	1 cut(s)	650
AlwNI	CAGNNNCTG	1 cut(s)	10
Ama87I	CYCGRG	1 cut(s)	525
AoxI	GGCC	4 cut(s)	716, 1069, 1420, 1509
ApeKI	GCWGC	1 cut(s)	352
ApoI	RAATTY	6 cut(s)	500, 518, 1110, 1232, 1238, 1382
AspLEI	GCGC	2 cut(s)	295, 1065
AspS9I	GGNCC	2 cut(s)	234, 867
AsuHPI	GGTGA	4 cut(s)	585, 874, 1472, 1481
AsuII	TTCGAA	1 cut(s)	557
AvaI	CYCGRG	1 cut(s)	525
AvaII	GGWCC	2 cut(s)	234, 867
BaeI	ACNNNNGTAYC	2 cut(s)	1324, 1357
BalI	TGGCCA	1 cut(s)	718
BanI	GGYRCC	1 cut(s)	214
BanII	GRGCYC	2 cut(s)	18, 134
BauI	CACGAG	2 cut(s)	471, 509
BbrPI	CACGTG	1 cut(s)	358
BbsI	GAAGAC	1 cut(s)	794
Bbv12I	GWGCWC	3 cut(s)	18, 696, 1296
BbvCI	CCTCAGC	1 cut(s)	378
BbvI	GCAGC	1 cut(s)	364
BccI	CCATC	5 cut(s)	249, 1051, 1294, 1354, 1412
BciT130I	CCWGG	2 cut(s)	1488, 1513
BciVI	GTATCC	1 cut(s)	1443
BclI	TGATCA	1 cut(s)	460
BcoDI	GTCTC	2 cut(s)	794, 884
BfoI	RGCGCY	1 cut(s)	1066
BfuAI	ACCTGC	1 cut(s)	1305
BfuI	GTATCC	1 cut(s)	1443
BisI	GCNGC	1 cut(s)	353
BlsI	GCNGC	1 cut(s)	354
Bme1390I	CCNGG	2 cut(s)	1488, 1513
Bme18I	GGWCC	2 cut(s)	234, 867
BmeT110I	CYCGRG	1 cut(s)	525
BmgT120I	GGNCC	2 cut(s)	234, 867
BmiI	GGNNCC	1 cut(s)	216
BmrFI	CCNGG	2 cut(s)	1488, 1513
BmrI	ACTGGG	1 cut(s)	1025
BmsI	GCATC	6 cut(s)	78, 98, 290, 1107, 1423, 1462
BmuI	ACTGGG	1 cut(s)	1025
BoxI	GACNNNNGTC	1 cut(s)	876
BpiI	GAAGAC	1 cut(s)	794
BpmI	CTGGAG	1 cut(s)	32
Bpu10I	CCTNAGC	1 cut(s)	378
Bpu14I	TTCGAA	1 cut(s)	557
BpuEI	CTTGAG	2 cut(s)	618, 1310
BsaAI	YACGTR	2 cut(s)	358, 1454
BsaBI	GATNNNNATC	1 cut(s)	903
BsaHI	GRCGYC	1 cut(s)	244
BsaJI	CCNNGG	3 cut(s)	39, 171, 1066
BsaXI	ACNNNNNCTCC	3 cut(s)	30, 1256, 1286
Bsc4I	CCNNNNNNNGG	2 cut(s)	914, 1429
Bse118I	RCCGGY	1 cut(s)	1507
Bse1I	ACTGG	4 cut(s)	15, 256, 584, 1020
Bse3DI	GCAATG	3 cut(s)	786, 821, 1151
Bse8I	GATNNNNATC	1 cut(s)	903
BseBI	CCWGG	2 cut(s)	1488, 1513
BseDI	CCNNGG	3 cut(s)	39, 171, 1066
BseGI	GGATG	6 cut(s)	69, 260, 388, 904, 1027, 1438
BseJI	GATNNNNATC	1 cut(s)	903
BseLI	CCNNNNNNNGG	2 cut(s)	914, 1429
BseMI	GCAATG	3 cut(s)	786, 821, 1151
BseMII	CTCAG	3 cut(s)	369, 1281, 1388
BseNI	ACTGG	4 cut(s)	15, 256, 584, 1020
BseRI	GAGGAG	1 cut(s)	336
BseXI	GCAGC	1 cut(s)	364
BseYI	CCCAGC	2 cut(s)	727, 1206
BsgI	GTGCAG	1 cut(s)	1283
BshFI	GGCC	4 cut(s)	718, 1071, 1422, 1511
BshNI	GGYRCC	1 cut(s)	214
BsiHKAI	GWGCWC	3 cut(s)	18, 696, 1296
BsiHKCI	CYCGRG	1 cut(s)	525
BsiSI	CCGG	1 cut(s)	1508
BslFI	GGGAC	2 cut(s)	744, 982
BslI	CCNNNNNNNGG	2 cut(s)	914, 1429
BsmAI	GTCTC	2 cut(s)	794, 884
BsmFI	GGGAC	2 cut(s)	744, 982
BsmI	GAATGC	1 cut(s)	1479
BsnI	GGCC	4 cut(s)	718, 1071, 1422, 1511
BsoBI	CYCGRG	1 cut(s)	525
Bsp119I	TTCGAA	1 cut(s)	557
Bsp1286I	GDGCHC	4 cut(s)	18, 134, 696, 1296
Bsp1407I	TGTACA	1 cut(s)	312
Bsp143I	GATC	5 cut(s)	460, 642, 961, 988, 1344
Bsp19I	CCATGG	1 cut(s)	171
BspACI	CCGC	4 cut(s)	640, 820, 1204, 1336
BspANI	GGCC	4 cut(s)	718, 1071, 1422, 1511
BspCNI	CTCAG	3 cut(s)	370, 1282, 1389
BspHI	TCATGA	2 cut(s)	144, 457
BspLI	GGNNCC	1 cut(s)	216
BspMI	ACCTGC	1 cut(s)	1305
BspPI	GGATC	1 cut(s)	650
BspT104I	TTCGAA	1 cut(s)	557
BspT107I	GGYRCC	1 cut(s)	214
BsrDI	GCAATG	3 cut(s)	786, 821, 1151
BsrFI	RCCGGY	1 cut(s)	1507
BsrGI	TGTACA	1 cut(s)	312
BsrI	ACTGG	4 cut(s)	15, 256, 584, 1020
BssAI	RCCGGY	1 cut(s)	1507
BssECI	CCNNGG	3 cut(s)	39, 171, 1066
BssMI	GATC	5 cut(s)	460, 642, 961, 988, 1344
BssNI	GRCGYC	1 cut(s)	244
BssSI	CACGAG	2 cut(s)	471, 509
BssT1I	CCWWGG	2 cut(s)	171, 1066
Bst2BI	CACGAG	2 cut(s)	471, 509
Bst2UI	CCWGG	2 cut(s)	1488, 1513
Bst4CI	ACNGT	3 cut(s)	974, 1085, 1221
BstACI	GRCGYC	1 cut(s)	244
BstAUI	TGTACA	1 cut(s)	312
BstBAI	YACGTR	2 cut(s)	358, 1454
BstBI	TTCGAA	1 cut(s)	557
BstC8I	GCNNGC	3 cut(s)	87, 1477, 1509
BstDEI	CTNAG	3 cut(s)	378, 1290, 1397
BstDSI	CCRYGG	1 cut(s)	171
BstF5I	GGATG	6 cut(s)	69, 260, 388, 904, 1027, 1438
BstH2I	RGCGCY	1 cut(s)	1066
BstHHI	GCGC	2 cut(s)	295, 1065
BstKTI	GATC	5 cut(s)	463, 645, 964, 991, 1347
BstMAI	GTCTC	2 cut(s)	794, 884
BstMBI	GATC	5 cut(s)	460, 642, 961, 988, 1344
BstMWI	GCNNNNNNNGC	2 cut(s)	86, 724
BstNI	CCWGG	2 cut(s)	1488, 1513
BstPAI	GACNNNNGTC	1 cut(s)	876
BstSCI	CCNGG	2 cut(s)	1486, 1511
BstV1I	GCAGC	1 cut(s)	364
BstV2I	GAAGAC	1 cut(s)	794
BsuI	GTATCC	1 cut(s)	1443
BsuRI	GGCC	4 cut(s)	718, 1071, 1422, 1511
BtgI	CCRYGG	1 cut(s)	171
BtsCI	GGATG	6 cut(s)	69, 260, 388, 904, 1027, 1438
BtsI	GCAGTG	1 cut(s)	1502
BtsIMutI	CAGTG	2 cut(s)	249, 1502
BveI	ACCTGC	1 cut(s)	1305
Cac8I	GCNNGC	3 cut(s)	87, 1477, 1509
CaiI	CAGNNNCTG	1 cut(s)	10
CciI	TCATGA	2 cut(s)	144, 457
CfoI	GCGC	2 cut(s)	295, 1065
Cfr10I	RCCGGY	1 cut(s)	1507
Cfr13I	GGNCC	2 cut(s)	234, 867
CseI	GACGC	1 cut(s)	252
Csp6I	GTAC	6 cut(s)	160, 262, 313, 616, 1013, 1189
CviAII	CATG	9 cut(s)	52, 82, 145, 150, 172, 458, 467, 646, 926
CviQI	GTAC	6 cut(s)	160, 262, 313, 616, 1013, 1189
DdeI	CTNAG	3 cut(s)	378, 1290, 1397
DpnI	GATC	5 cut(s)	462, 644, 963, 990, 1346
DpnII	GATC	5 cut(s)	460, 642, 961, 988, 1344
EaeI	YGGCCR	1 cut(s)	716
EciI	GGCGGA	2 cut(s)	655, 835
Ecl136II	GAGCTC	1 cut(s)	16
Eco130I	CCWWGG	2 cut(s)	171, 1066
Eco24I	GRGCYC	2 cut(s)	18, 134
Eco32I	GATATC	2 cut(s)	372, 478
Eco47I	GGWCC	2 cut(s)	234, 867
Eco53kI	GAGCTC	1 cut(s)	16
Eco72I	CACGTG	1 cut(s)	358
Eco88I	CYCGRG	1 cut(s)	525
EcoICRI	GAGCTC	1 cut(s)	16
EcoRI	GAATTC	1 cut(s)	1238
EcoRII	CCWGG	2 cut(s)	1486, 1511
EcoRV	GATATC	2 cut(s)	372, 478
EcoT14I	CCWWGG	2 cut(s)	171, 1066
EcoT22I	ATGCAT	1 cut(s)	742
EcoT38I	GRGCYC	2 cut(s)	18, 134
ErhI	CCWWGG	2 cut(s)	171, 1066
FaeI	CATG	9 cut(s)	55, 85, 148, 153, 175, 461, 470, 649, 929
FaqI	GGGAC	2 cut(s)	744, 982
FatI	CATG	9 cut(s)	51, 81, 144, 149, 171, 457, 466, 645, 925
FauNDI	CATATG	1 cut(s)	742
FbaI	TGATCA	1 cut(s)	460
Fnu4HI	GCNGC	1 cut(s)	353
FokI	GGATG	6 cut(s)	56, 267, 395, 911, 1034, 1445
FriOI	GRGCYC	2 cut(s)	18, 134
Fsp4HI	GCNGC	1 cut(s)	353
GlaI	GCGC	2 cut(s)	294, 1064
GluI	GCNGC	1 cut(s)	353
GsaI	CCCAGC	2 cut(s)	731, 1210
GsuI	CTGGAG	1 cut(s)	32
HaeII	RGCGCY	1 cut(s)	1066
HaeIII	GGCC	4 cut(s)	718, 1071, 1422, 1511
HapII	CCGG	1 cut(s)	1508
HgaI	GACGC	1 cut(s)	252
HhaI	GCGC	2 cut(s)	295, 1065
Hin1I	GRCGYC	1 cut(s)	244
Hin1II	CATG	9 cut(s)	55, 85, 148, 153, 175, 461, 470, 649, 929
Hin6I	GCGC	2 cut(s)	293, 1063
HinP1I	GCGC	2 cut(s)	293, 1063
HincII	GTYRAC	1 cut(s)	939
HindII	GTYRAC	1 cut(s)	939
HindIII	AAGCTT	2 cut(s)	657, 1440
HpaI	GTTAAC	1 cut(s)	939
HpaII	CCGG	1 cut(s)	1508
HphI	GGTGA	4 cut(s)	585, 874, 1472, 1481
Hpy166II	GTNNAC	5 cut(s)	49, 107, 618, 939, 1275
Hpy188I	TCNGA	6 cut(s)	31, 94, 574, 655, 1030, 1291
Hpy188III	TCNNGA	8 cut(s)	124, 145, 285, 458, 481, 511, 527, 1415
Hpy8I	GTNNAC	5 cut(s)	49, 107, 618, 939, 1275
Hpy99I	CGWCG	2 cut(s)	246, 275
HpyAV	CCTTC	3 cut(s)	49, 121, 895
HpyCH4III	ACNGT	3 cut(s)	974, 1085, 1221
HpyCH4IV	ACGT	2 cut(s)	357, 1453
HpyCH4V	TGCA	9 cut(s)	4, 89, 470, 740, 925, 1156, 1300, 1436, 1479
HpyF10VI	GCNNNNNNNGC	2 cut(s)	86, 724
HpyF3I	CTNAG	3 cut(s)	378, 1290, 1397
HpySE526I	ACGT	2 cut(s)	357, 1453
Hsp92I	GRCGYC	1 cut(s)	244
Hsp92II	CATG	9 cut(s)	55, 85, 148, 153, 175, 461, 470, 649, 929
HspAI	GCGC	2 cut(s)	293, 1063
KroI	GCCGGC	1 cut(s)	1507
KroNI	GCCGGC	1 cut(s)	1509
Ksp22I	TGATCA	1 cut(s)	460
KspAI	GTTAAC	1 cut(s)	939
Kzo9I	GATC	5 cut(s)	460, 642, 961, 988, 1344
LmnI	GCTCC	4 cut(s)	13, 21, 1060, 1354
Lsp1109I	GCAGC	1 cut(s)	364
LweI	GCATC	6 cut(s)	78, 98, 290, 1107, 1423, 1462
MaeII	ACGT	2 cut(s)	357, 1453
MaeIII	GTNAC	7 cut(s)	511, 591, 968, 1085, 1175, 1199, 1215
MalI	GATC	5 cut(s)	462, 644, 963, 990, 1346
MboI	GATC	5 cut(s)	460, 642, 961, 988, 1344
MboII	GAAGA	3 cut(s)	796, 799, 983
MhlI	GDGCHC	4 cut(s)	18, 134, 696, 1296
MlsI	TGGCCA	1 cut(s)	718
MluNI	TGGCCA	1 cut(s)	718
MlyI	GAGTC	4 cut(s)	333, 563, 1034, 1097
MmeI	TCCRAC	2 cut(s)	474, 606
Mox20I	TGGCCA	1 cut(s)	718
Mph1103I	ATGCAT	1 cut(s)	742
MroNI	GCCGGC	1 cut(s)	1507
MscI	TGGCCA	1 cut(s)	718
MseI	TTAA	6 cut(s)	113, 348, 662, 774, 938, 1121
MslI	CAYNNNNRTG	3 cut(s)	857, 1039, 1305
Msp20I	TGGCCA	1 cut(s)	718
MspA1I	CMGCKG	2 cut(s)	377, 1206
MspI	CCGG	1 cut(s)	1508
MspR9I	CCNGG	2 cut(s)	1488, 1513
Mva1269I	GAATGC	1 cut(s)	1479
MvaI	CCWGG	2 cut(s)	1488, 1513
MwoI	GCNNNNNNNGC	2 cut(s)	86, 724
NaeI	GCCGGC	1 cut(s)	1509
NcoI	CCATGG	1 cut(s)	171
NdeI	CATATG	1 cut(s)	742
NdeII	GATC	5 cut(s)	460, 642, 961, 988, 1344
NgoMIV	GCCGGC	1 cut(s)	1507
NlaIII	CATG	9 cut(s)	55, 85, 148, 153, 175, 461, 470, 649, 929
NlaIV	GGNNCC	1 cut(s)	216
NmeAIII	GCCGAG	1 cut(s)	64
NmuCI	GTSAC	3 cut(s)	511, 591, 1085
NsiI	ATGCAT	1 cut(s)	742
NspV	TTCGAA	1 cut(s)	557
OliI	CACNNNNGTG	1 cut(s)	857
PaeR7I	CTCGAG	1 cut(s)	525
PagI	TCATGA	2 cut(s)	144, 457
PaqCI	CACCTGC	1 cut(s)	1305
PcsI	WCGNNNNNNNCGW	1 cut(s)	238
PctI	GAATGC	1 cut(s)	1479
PdiI	GCCGGC	1 cut(s)	1509
PfeI	GAWTC	7 cut(s)	154, 484, 554, 629, 650, 746, 1031
PkrI	GCNGC	1 cut(s)	354
PleI	GAGTC	4 cut(s)	332, 563, 1033, 1097
PmaCI	CACGTG	1 cut(s)	358
PmlI	CACGTG	1 cut(s)	358
PpsI	GAGTC	4 cut(s)	332, 563, 1033, 1097
Ppu21I	YACGTR	2 cut(s)	358, 1454
PshAI	GACNNNNGTC	1 cut(s)	876
Psp124BI	GAGCTC	1 cut(s)	18
Psp6I	CCWGG	2 cut(s)	1486, 1511
PspCI	CACGTG	1 cut(s)	358
PspFI	CCCAGC	2 cut(s)	727, 1206
PspGI	CCWGG	2 cut(s)	1486, 1511
PspN4I	GGNNCC	1 cut(s)	216
PspPI	GGNCC	2 cut(s)	234, 867
PstNI	CAGNNNCTG	1 cut(s)	10
PvuII	CAGCTG	1 cut(s)	377
RsaI	GTAC	6 cut(s)	161, 263, 314, 617, 1014, 1190
RsaNI	GTAC	6 cut(s)	160, 262, 313, 616, 1013, 1189
RseI	CAYNNNNRTG	3 cut(s)	857, 1039, 1305
SacI	GAGCTC	1 cut(s)	18
SaqAI	TTAA	6 cut(s)	113, 348, 662, 774, 938, 1121
SatI	GCNGC	1 cut(s)	353
Sau3AI	GATC	5 cut(s)	460, 642, 961, 988, 1344
Sau96I	GGNCC	2 cut(s)	234, 867
SchI	GAGTC	4 cut(s)	333, 563, 1034, 1097
ScrFI	CCNGG	2 cut(s)	1488, 1513
SduI	GDGCHC	4 cut(s)	18, 134, 696, 1296
SfaNI	GCATC	6 cut(s)	78, 98, 290, 1107, 1423, 1462
Sfr274I	CTCGAG	1 cut(s)	525
SfuI	TTCGAA	1 cut(s)	557
SinI	GGWCC	2 cut(s)	234, 867
SlaI	CTCGAG	1 cut(s)	525
SmiMI	CAYNNNNRTG	3 cut(s)	857, 1039, 1305
SmlI	CTYRAG	3 cut(s)	525, 633, 1325
SmoI	CTYRAG	3 cut(s)	525, 633, 1325
SsiI	CCGC	4 cut(s)	640, 820, 1204, 1336
SspI	AATATT	1 cut(s)	1005
SstI	GAGCTC	1 cut(s)	18
StyD4I	CCNGG	2 cut(s)	1486, 1511
StyI	CCWWGG	2 cut(s)	171, 1066
TaaI	ACNGT	3 cut(s)	974, 1085, 1221
TaiI	ACGT	2 cut(s)	360, 1456
TaqI	TCGA	9 cut(s)	241, 437, 482, 526, 557, 567, 960, 1101, 1242
TaqII	GACCGA	2 cut(s)	222, 884
TatI	WGTACW	3 cut(s)	261, 312, 1012
TfiI	GAWTC	7 cut(s)	154, 484, 554, 629, 650, 746, 1031
Tru1I	TTAA	6 cut(s)	113, 348, 662, 774, 938, 1121
Tru9I	TTAA	6 cut(s)	113, 348, 662, 774, 938, 1121
TscAI	CASTG	2 cut(s)	256, 1509
TseFI	GTSAC	3 cut(s)	511, 591, 1085
TseI	GCWGC	1 cut(s)	352
Tsp45I	GTSAC	3 cut(s)	511, 591, 1085
TspDTI	ATGAA	6 cut(s)	68, 133, 446, 797, 1375, 1407
TspGWI	ACGGA	3 cut(s)	147, 333, 718
TspRI	CASTG	2 cut(s)	256, 1509
VpaK11BI	GGWCC	2 cut(s)	234, 867
XapI	RAATTY	6 cut(s)	500, 518, 1110, 1232, 1238, 1382
XhoI	CTCGAG	1 cut(s)	525
Zsp2I	ATGCAT	1 cut(s)	742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.