Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004943

Physical Location & Seq

Genomic Coordinates Forward (+)

11378463 .. 11381001

Gene Structure 2539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G011980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGTTGTGGTTGATTGTAGACGTCTACCTTGCCAGATACAACTTTCGTTCCAAGGCCTTGCACGAATCTGTGATTTTATCTCTCTCTCTCGAAATCGGAAGCGATGCAGGAACCGGAGCTCACGACCTCTCCGACAACGCCGAGGTGGTTTACATGAAGGATAATGTGAGCATCCACCACGCCATGCTTGCATCAGAGAGGATTAGTGGACGATTAACGCTATTCAAGAAGGGCTCTTGTCTATTCATGGCATGGATTCCGTACTCAAACGCCATGGTTTGTGAGAAAGATAGAATTGTTTATAGTATAAGGGAGGTGCCATTGACAGAGGTTCGGTCCATTCGACGCCACACTGGATGGCAGTACATTATCGTCGTTTTGGCATCTGGACTTGCGCTTCCCCCTCTCTACTTGTACAACGGAGGAGTCAAGGAGTTCCTTGCTACAATCAAGCAGCATGTGTCTATTGTGATATCAGCTGAGGATGATAATGTATTTCTTGTCAATGATTTTCAAAATCCTCTAACAACTATAATTTCGAGGCGAAGGCAAAAGGTTCATGATCATCATGCACGAGATCTCTCGATTCAAGTGTTGGAAAAATTCTCTCTCGTGACGAAATTTGCTCGAGAAAAAACTTGGCAACCCTTCTGTGGTGATTCGAACAACGTCTCTGATAGAAGTCCAGTCTTGTCACCTTTGGGGTGTGATGAGTGGTACACCTTGTTGGATTCTCAAGGGCGGATCATGGATTCAGAAGCTTTAAGAAAGAGAGTATTTTATGGGGGAGTTGAGCACAAATTACGGAAAGAGGTCTGGCCATTCTTGCTGGGACACTATGCATATGATTCAACATATACAGAGAGGGAGTATGTTAAGGCAATGAAGAGGGCAGAGTTTGAGACACTAAAGAAGCAATGGCAGAGTATCTCGGCTATCTCCCCAGAGCAGCACATTATTGACAAAGATGTGGTGAGGACCGACAGATGTCTCTCCTTCTACAATGGGGATGATAATCCAAATGTGGATCTGTTGCATGACATATTGTTAACATACTCGTTTTACAACTTGGATCTTGGTTACTGTCAGGGTATGAATGATCTTCTGTCCCCAATATTGTTTGTACTGGGGGATGAGTCGGAATCATTTTGGTGTTTTGTTAGACTGATGGAGCGCCTTGGCCCCAATTTTGACCGTGACCAAAAAGGCATGGACCCTCAACTTCTTGCTTTAAGGAATTTGGTGGAGTTGTTAGACAGACCATTGCATAATTACTTTACACTGCAGCGTAACTGCTTGGAATACCACTTTTGTTTCCGCTGGGTTCTGTTACAGTTCAAAAGGGAATTTGAATTCGACAAGACATTGAGATTATGGGAGGCTCTGTGGACACATTATCCATCTGAGCACCTGCACTTGTATGTGTGTGTTGCGATACTCAAGCGATACCGTAGTAAGATCATTGGGGAGCAGATGGATAAAGACACTCTAATCAAATTCATCAGTGAACTGAGTGGTCAAATAAATCTTGATGGCCTTGTGAGGGATGCAGAAGCTCTGTTCATATGTGCTGGTGAGAAGGTGATGCTTGCATTCCACCTGGAACAACCGTCACTGCCTGTTGATGGTGGTTTGTTATACCCTCAGGAAGAACTAGATGGCTTTATTCATTCACCCATCTTTAAACTTGATACGAACACTTTTTGTGACATCACTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUF3548 RabGAP-TBC

Protein Analysis

573

Amino Acids

66.51

Weight (kDa)

5.94

Isoelectric Point (pI)

43.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_RBD	PF12068	49 - 177	1.6e-07	Rab-binding domain (RBD)
RabGAP-TBC	PF00566	266 - 488	1.7e-46	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	345 - 503	1.1e-11	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52580 AT5G52580 AT5G52580
fragaria_vesca	FvH4_1g02680
malus_domestica	MD02G1027400.v1.1 MD15G1168800.v1.1
prunus_persica	Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1
pyrus_communis	pycom02g02230 pycom15g15050
rosa_chinensis	RchiOBHm_Chr2g0087771 RchiOBHm_Chr7g0194011
rosa_laevigata	RLG00000004223 RLG00000015897
rosa_multiflora	Rmu_sc0021871.1_g000005
rosa_roxburghii	Rroxscaffold_2G00153250 Rroxscaffold_3G00261620
rosa_rugosa	Rorug01G0478700 Rorug07G0013200
rosa_samantha	Rh2AG032900 Rh2CG032700 Rh2DG032500 Rh7AG140400 Rh7BG140900 Rh7CG144400 Rh7DG141700
rosa_wichuraiana	Rw2G002560 Rw7G011980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1419
AatII	GACGTC	1 cut(s)	24
Acc36I	ACCTGC	1 cut(s)	1419
AccB1I	GGYRCC	1 cut(s)	316
AccI	GTMKAC	2 cut(s)	18, 24
AciI	CCGC	2 cut(s)	742, 1318
AclWI	GGATC	3 cut(s)	752, 1035, 1080
AcoI	YGGCCR	1 cut(s)	818
AcsI	RAATTY	6 cut(s)	602, 620, 1237, 1346, 1352, 1496
AcyI	GRCGYC	2 cut(s)	21, 346
AfaI	GTAC	5 cut(s)	263, 365, 416, 719, 1125
AfiI	CCNNNNNNNGG	3 cut(s)	653, 1543, 1625
AgsI	TTSAA	6 cut(s)	226, 515, 590, 852, 1339, 1352
AjnI	CCWGG	1 cut(s)	1599
AluBI	AGCT	4 cut(s)	119, 479, 761, 1556
AluI	AGCT	4 cut(s)	119, 479, 761, 1556
Alw21I	GWGCWC	3 cut(s)	121, 798, 1410
Alw26I	GTCTC	3 cut(s)	676, 896, 995
AlwI	GGATC	3 cut(s)	752, 1035, 1080
Ama87I	CYCGRG	1 cut(s)	627
AoxI	GGCC	4 cut(s)	54, 818, 1180, 1534
ApeKI	GCWGC	3 cut(s)	454, 949, 1285
ApoI	RAATTY	6 cut(s)	602, 620, 1237, 1346, 1352, 1496
AspLEI	GCGC	2 cut(s)	397, 1176
AspS9I	GGNCC	4 cut(s)	336, 978, 1181, 1213
AsuHPI	GGTGA	6 cut(s)	668, 687, 985, 1586, 1594, 1665
AsuII	TTCGAA	1 cut(s)	662
AvaI	CYCGRG	1 cut(s)	627
AvaII	GGWCC	3 cut(s)	336, 978, 1213
AxyI	CCTNAGG	1 cut(s)	1644
BaeI	ACNNNNGTAYC	2 cut(s)	1438, 1471
BalI	TGGCCA	1 cut(s)	820
BanI	GGYRCC	1 cut(s)	316
BanII	GRGCYC	2 cut(s)	121, 236
BauI	CACGAG	2 cut(s)	573, 611
Bbv12I	GWGCWC	3 cut(s)	121, 798, 1410
BbvCI	CCTCAGC	1 cut(s)	480
BbvI	GCAGC	3 cut(s)	466, 961, 1297
BccI	CCATC	8 cut(s)	351, 1162, 1408, 1468, 1526, 1619, 1652, 1685
BciT130I	CCWGG	1 cut(s)	1601
BclI	TGATCA	1 cut(s)	562
BcoDI	GTCTC	3 cut(s)	676, 896, 995
BfaI	CTAG	2 cut(s)	1655, 1716
BfmI	CTRYAG	1 cut(s)	1283
BfoI	RGCGCY	1 cut(s)	1177
BfuAI	ACCTGC	1 cut(s)	1419
BglII	AGATCT	1 cut(s)	577
BisI	GCNGC	3 cut(s)	455, 950, 1286
BlsI	GCNGC	3 cut(s)	456, 951, 1287
Bme1390I	CCNGG	1 cut(s)	1601
Bme18I	GGWCC	3 cut(s)	336, 978, 1213
BmeT110I	CYCGRG	1 cut(s)	627
BmgT120I	GGNCC	4 cut(s)	336, 978, 1181, 1213
BmiI	GGNNCC	4 cut(s)	112, 318, 1183, 1215
BmrFI	CCNGG	1 cut(s)	1601
BmrI	ACTGGG	1 cut(s)	1136
BmsI	GCATC	6 cut(s)	94, 180, 200, 392, 1537, 1575
BmuI	ACTGGG	1 cut(s)	1136
BoxI	GACNNNNGTC	1 cut(s)	987
Bpu10I	CCTNAGC	1 cut(s)	480
Bpu14I	TTCGAA	1 cut(s)	662
BpuEI	CTTGAG	2 cut(s)	720, 1424
BsaBI	GATNNNNATC	1 cut(s)	1014
BsaHI	GRCGYC	2 cut(s)	21, 346
BsaJI	CCNNGG	4 cut(s)	51, 141, 273, 1177
BsaWI	WCCGGW	1 cut(s)	113
BsaXI	ACNNNNNCTCC	4 cut(s)	113, 143, 1370, 1400
Bsc4I	CCNNNNNNNGG	3 cut(s)	653, 1543, 1625
Bse1I	ACTGG	3 cut(s)	358, 686, 1131
Bse21I	CCTNAGG	1 cut(s)	1644
Bse3DI	GCAATG	3 cut(s)	888, 923, 1262
Bse8I	GATNNNNATC	1 cut(s)	1014
BseBI	CCWGG	1 cut(s)	1601
BseDI	CCNNGG	4 cut(s)	51, 141, 273, 1177
BseGI	GGATG	6 cut(s)	171, 362, 490, 1015, 1138, 1552
BseJI	GATNNNNATC	1 cut(s)	1014
BseLI	CCNNNNNNNGG	3 cut(s)	653, 1543, 1625
BseMI	GCAATG	3 cut(s)	888, 923, 1262
BseMII	CTCAG	4 cut(s)	471, 1395, 1502, 1658
BseNI	ACTGG	3 cut(s)	358, 686, 1131
BseRI	GAGGAG	1 cut(s)	438
BseXI	GCAGC	3 cut(s)	466, 961, 1297
BseYI	CCCAGC	2 cut(s)	829, 1320
BsgI	GTGCAG	1 cut(s)	1397
BshFI	GGCC	4 cut(s)	56, 820, 1182, 1536
BshNI	GGYRCC	1 cut(s)	316
BsiHKAI	GWGCWC	3 cut(s)	121, 798, 1410
BsiHKCI	CYCGRG	1 cut(s)	627
BsiSI	CCGG	1 cut(s)	114
BslFI	GGGAC	2 cut(s)	846, 1093
BslI	CCNNNNNNNGG	3 cut(s)	653, 1543, 1625
BsmAI	GTCTC	3 cut(s)	676, 896, 995
BsmBI	CGTCTC	1 cut(s)	676
BsmFI	GGGAC	2 cut(s)	846, 1093
BsmI	GAATGC	1 cut(s)	1592
BsnI	GGCC	4 cut(s)	56, 820, 1182, 1536
BsoBI	CYCGRG	1 cut(s)	627
Bsp119I	TTCGAA	1 cut(s)	662
Bsp1286I	GDGCHC	4 cut(s)	121, 236, 798, 1410
Bsp1407I	TGTACA	1 cut(s)	414
Bsp143I	GATC	7 cut(s)	562, 577, 744, 1027, 1072, 1099, 1458
Bsp19I	CCATGG	1 cut(s)	273
BspACI	CCGC	2 cut(s)	742, 1318
BspANI	GGCC	4 cut(s)	56, 820, 1182, 1536
BspCNI	CTCAG	4 cut(s)	472, 1396, 1503, 1657
BspHI	TCATGA	1 cut(s)	559
BspLI	GGNNCC	4 cut(s)	112, 318, 1183, 1215
BspMAI	CTGCAG	1 cut(s)	1287
BspMI	ACCTGC	1 cut(s)	1419
BspPI	GGATC	3 cut(s)	752, 1035, 1080
BspT104I	TTCGAA	1 cut(s)	662
BspT107I	GGYRCC	1 cut(s)	316
BsrDI	GCAATG	3 cut(s)	888, 923, 1262
BsrGI	TGTACA	1 cut(s)	414
BsrI	ACTGG	3 cut(s)	358, 686, 1131
BssECI	CCNNGG	4 cut(s)	51, 141, 273, 1177
BssMI	GATC	7 cut(s)	562, 577, 744, 1027, 1072, 1099, 1458
BssNI	GRCGYC	2 cut(s)	21, 346
BssSI	CACGAG	2 cut(s)	573, 611
BssT1I	CCWWGG	3 cut(s)	51, 273, 1177
Bst2BI	CACGAG	2 cut(s)	573, 611
Bst2UI	CCWGG	1 cut(s)	1601
Bst4CI	ACNGT	5 cut(s)	1085, 1196, 1335, 1451, 1611
Bst6I	CTCTTC	1 cut(s)	881
BstACI	GRCGYC	2 cut(s)	21, 346
BstAUI	TGTACA	1 cut(s)	414
BstBI	TTCGAA	1 cut(s)	662
BstC8I	GCNNGC	2 cut(s)	189, 1590
BstDEI	CTNAG	4 cut(s)	480, 1404, 1511, 1644
BstDSI	CCRYGG	1 cut(s)	273
BstF5I	GGATG	6 cut(s)	171, 362, 490, 1015, 1138, 1552
BstH2I	RGCGCY	1 cut(s)	1177
BstHHI	GCGC	2 cut(s)	397, 1176
BstKTI	GATC	7 cut(s)	565, 580, 747, 1030, 1075, 1102, 1461
BstMAI	GTCTC	3 cut(s)	676, 896, 995
BstMBI	GATC	7 cut(s)	562, 577, 744, 1027, 1072, 1099, 1458
BstMWI	GCNNNNNNNGC	2 cut(s)	188, 826
BstNI	CCWGG	1 cut(s)	1601
BstNSI	RCATGY	1 cut(s)	461
BstPAI	GACNNNNGTC	1 cut(s)	987
BstSCI	CCNGG	1 cut(s)	1599
BstSFI	CTRYAG	1 cut(s)	1283
BstV1I	GCAGC	3 cut(s)	466, 961, 1297
BstX2I	RGATCY	3 cut(s)	577, 1027, 1072
BstYI	RGATCY	3 cut(s)	577, 1027, 1072
Bsu36I	CCTNAGG	1 cut(s)	1644
BsuRI	GGCC	4 cut(s)	56, 820, 1182, 1536
BtgI	CCRYGG	1 cut(s)	273
BtgZI	GCGATG	1 cut(s)	117
BtsCI	GGATG	6 cut(s)	171, 362, 490, 1015, 1138, 1552
BtsI	GCAGTG	2 cut(s)	1280, 1613
BtsIMutI	CAGTG	4 cut(s)	351, 1280, 1510, 1613
BveI	ACCTGC	1 cut(s)	1419
Cac8I	GCNNGC	2 cut(s)	189, 1590
CciI	TCATGA	1 cut(s)	559
CfoI	GCGC	2 cut(s)	397, 1176
Cfr13I	GGNCC	4 cut(s)	336, 978, 1181, 1213
CseI	GACGC	1 cut(s)	354
Csp6I	GTAC	5 cut(s)	262, 364, 415, 718, 1124
CviQI	GTAC	5 cut(s)	262, 364, 415, 718, 1124
DdeI	CTNAG	4 cut(s)	480, 1404, 1511, 1644
DpnI	GATC	7 cut(s)	564, 579, 746, 1029, 1074, 1101, 1460
DpnII	GATC	7 cut(s)	562, 577, 744, 1027, 1072, 1099, 1458
DraI	TTTAAA	1 cut(s)	1684
EaeI	YGGCCR	1 cut(s)	818
Eam1104I	CTCTTC	1 cut(s)	881
EarI	CTCTTC	1 cut(s)	881
EciI	GGCGGA	1 cut(s)	757
Ecl136II	GAGCTC	1 cut(s)	119
Eco130I	CCWWGG	3 cut(s)	51, 273, 1177
Eco147I	AGGCCT	1 cut(s)	56
Eco24I	GRGCYC	2 cut(s)	121, 236
Eco32I	GATATC	1 cut(s)	474
Eco47I	GGWCC	3 cut(s)	336, 978, 1213
Eco53kI	GAGCTC	1 cut(s)	119
Eco81I	CCTNAGG	1 cut(s)	1644
Eco88I	CYCGRG	1 cut(s)	627
EcoICRI	GAGCTC	1 cut(s)	119
EcoRI	GAATTC	1 cut(s)	1352
EcoRII	CCWGG	1 cut(s)	1599
EcoRV	GATATC	1 cut(s)	474
EcoT14I	CCWWGG	3 cut(s)	51, 273, 1177
EcoT22I	ATGCAT	1 cut(s)	844
EcoT38I	GRGCYC	2 cut(s)	121, 236
ErhI	CCWWGG	3 cut(s)	51, 273, 1177
Esp3I	CGTCTC	1 cut(s)	676
FaqI	GGGAC	2 cut(s)	846, 1093
FauNDI	CATATG	2 cut(s)	844, 1565
FbaI	TGATCA	1 cut(s)	562
FblI	GTMKAC	2 cut(s)	18, 24
Fnu4HI	GCNGC	3 cut(s)	455, 950, 1286
FokI	GGATG	6 cut(s)	158, 369, 497, 1022, 1145, 1559
FriOI	GRGCYC	2 cut(s)	121, 236
Fsp4HI	GCNGC	3 cut(s)	455, 950, 1286
FspBI	CTAG	2 cut(s)	1655, 1716
GlaI	GCGC	2 cut(s)	396, 1175
GluI	GCNGC	3 cut(s)	455, 950, 1286
GsaI	CCCAGC	2 cut(s)	833, 1324
HaeII	RGCGCY	1 cut(s)	1177
HaeIII	GGCC	4 cut(s)	56, 820, 1182, 1536
HapII	CCGG	1 cut(s)	114
HgaI	GACGC	1 cut(s)	354
HhaI	GCGC	2 cut(s)	397, 1176
Hin1I	GRCGYC	2 cut(s)	21, 346
Hin6I	GCGC	2 cut(s)	395, 1174
HinP1I	GCGC	2 cut(s)	395, 1174
HincII	GTYRAC	1 cut(s)	1050
HindII	GTYRAC	1 cut(s)	1050
HindIII	AAGCTT	1 cut(s)	759
HpaI	GTTAAC	1 cut(s)	1050
HpaII	CCGG	1 cut(s)	114
HphI	GGTGA	6 cut(s)	668, 687, 985, 1586, 1594, 1665
Hpy166II	GTNNAC	8 cut(s)	19, 25, 151, 209, 720, 1050, 1389, 1508
Hpy188I	TCNGA	7 cut(s)	98, 133, 196, 676, 757, 1141, 1405
Hpy8I	GTNNAC	8 cut(s)	19, 25, 151, 209, 720, 1050, 1389, 1508
Hpy99I	CGWCG	2 cut(s)	348, 377
HpyAV	CCTTC	6 cut(s)	151, 223, 540, 658, 1006, 1573
HpyCH4III	ACNGT	5 cut(s)	1085, 1196, 1335, 1451, 1611
HpyCH4IV	ACGT	2 cut(s)	21, 669
HpyF10VI	GCNNNNNNNGC	2 cut(s)	188, 826
HpyF3I	CTNAG	4 cut(s)	480, 1404, 1511, 1644
HpySE526I	ACGT	2 cut(s)	21, 669
Hsp92I	GRCGYC	2 cut(s)	21, 346
HspAI	GCGC	2 cut(s)	395, 1174
Ksp22I	TGATCA	1 cut(s)	562
KspAI	GTTAAC	1 cut(s)	1050
Kzo9I	GATC	7 cut(s)	562, 577, 744, 1027, 1072, 1099, 1458
LmnI	GCTCC	3 cut(s)	116, 1171, 1468
Lsp1109I	GCAGC	3 cut(s)	466, 961, 1297
LweI	GCATC	6 cut(s)	94, 180, 200, 392, 1537, 1575
MaeI	CTAG	2 cut(s)	1655, 1716
MaeII	ACGT	2 cut(s)	21, 669
MaeIII	GTNAC	8 cut(s)	613, 693, 1079, 1196, 1289, 1329, 1611, 1706
MalI	GATC	7 cut(s)	564, 579, 746, 1029, 1074, 1101, 1460
MboI	GATC	7 cut(s)	562, 577, 744, 1027, 1072, 1099, 1458
MboII	GAAGA	3 cut(s)	898, 1094, 1661
MflI	RGATCY	3 cut(s)	577, 1027, 1072
MhlI	GDGCHC	4 cut(s)	121, 236, 798, 1410
MlsI	TGGCCA	1 cut(s)	820
MluNI	TGGCCA	1 cut(s)	820
MlyI	GAGTC	2 cut(s)	435, 1145
MmeI	TCCRAC	4 cut(s)	156, 576, 708, 1119
Mox20I	TGGCCA	1 cut(s)	820
Mph1103I	ATGCAT	1 cut(s)	844
MscI	TGGCCA	1 cut(s)	820
MseI	TTAA	6 cut(s)	215, 764, 876, 1049, 1232, 1683
MslI	CAYNNNNRTG	2 cut(s)	1150, 1419
Msp20I	TGGCCA	1 cut(s)	820
MspA1I	CMGCKG	2 cut(s)	479, 1320
MspI	CCGG	1 cut(s)	114
MspR9I	CCNGG	1 cut(s)	1601
Mva1269I	GAATGC	1 cut(s)	1592
MvaI	CCWGG	1 cut(s)	1601
MwoI	GCNNNNNNNGC	2 cut(s)	188, 826
NcoI	CCATGG	1 cut(s)	273
NdeI	CATATG	2 cut(s)	844, 1565
NdeII	GATC	7 cut(s)	562, 577, 744, 1027, 1072, 1099, 1458
NlaIV	GGNNCC	4 cut(s)	112, 318, 1183, 1215
NmeAIII	GCCGAG	2 cut(s)	166, 911
NmuCI	GTSAC	5 cut(s)	613, 693, 1196, 1611, 1706
NsiI	ATGCAT	1 cut(s)	844
NspI	RCATGY	1 cut(s)	461
NspV	TTCGAA	1 cut(s)	662
PaeR7I	CTCGAG	1 cut(s)	627
PagI	TCATGA	1 cut(s)	559
PaqCI	CACCTGC	1 cut(s)	1419
PceI	AGGCCT	1 cut(s)	56
PcsI	WCGNNNNNNNCGW	2 cut(s)	129, 340
PctI	GAATGC	1 cut(s)	1592
PfeI	GAWTC	8 cut(s)	65, 256, 586, 659, 731, 752, 848, 1142
PkrI	GCNGC	3 cut(s)	456, 951, 1287
PleI	GAGTC	2 cut(s)	434, 1144
PpsI	GAGTC	2 cut(s)	434, 1144
PshAI	GACNNNNGTC	1 cut(s)	987
Psp124BI	GAGCTC	1 cut(s)	121
Psp6I	CCWGG	1 cut(s)	1599
PspFI	CCCAGC	2 cut(s)	829, 1320
PspGI	CCWGG	1 cut(s)	1599
PspN4I	GGNNCC	4 cut(s)	112, 318, 1183, 1215
PspPI	GGNCC	4 cut(s)	336, 978, 1181, 1213
PstI	CTGCAG	1 cut(s)	1287
PsuI	RGATCY	3 cut(s)	577, 1027, 1072
PvuII	CAGCTG	1 cut(s)	479
RsaI	GTAC	5 cut(s)	263, 365, 416, 719, 1125
RsaNI	GTAC	5 cut(s)	262, 364, 415, 718, 1124
RseI	CAYNNNNRTG	2 cut(s)	1150, 1419
SacI	GAGCTC	1 cut(s)	121
SaqAI	TTAA	6 cut(s)	215, 764, 876, 1049, 1232, 1683
SatI	GCNGC	3 cut(s)	455, 950, 1286
Sau3AI	GATC	7 cut(s)	562, 577, 744, 1027, 1072, 1099, 1458
Sau96I	GGNCC	4 cut(s)	336, 978, 1181, 1213
SchI	GAGTC	2 cut(s)	435, 1145
ScrFI	CCNGG	1 cut(s)	1601
SduI	GDGCHC	4 cut(s)	121, 236, 798, 1410
SfaNI	GCATC	6 cut(s)	94, 180, 200, 392, 1537, 1575
SfcI	CTRYAG	1 cut(s)	1283
Sfr274I	CTCGAG	1 cut(s)	627
SfuI	TTCGAA	1 cut(s)	662
SinI	GGWCC	3 cut(s)	336, 978, 1213
SlaI	CTCGAG	1 cut(s)	627
SmiMI	CAYNNNNRTG	2 cut(s)	1150, 1419
SmlI	CTYRAG	3 cut(s)	627, 735, 1439
SmoI	CTYRAG	3 cut(s)	627, 735, 1439
SseBI	AGGCCT	1 cut(s)	56
SsiI	CCGC	2 cut(s)	742, 1318
SspI	AATATT	1 cut(s)	1116
SspMI	CTAG	2 cut(s)	1655, 1716
SstI	GAGCTC	1 cut(s)	121
StuI	AGGCCT	1 cut(s)	56
StyD4I	CCNGG	1 cut(s)	1599
StyI	CCWWGG	3 cut(s)	51, 273, 1177
TaaI	ACNGT	5 cut(s)	1085, 1196, 1335, 1451, 1611
TaiI	ACGT	2 cut(s)	24, 672
TaqI	TCGA	7 cut(s)	90, 343, 539, 584, 628, 662, 1356
TaqII	GACCGA	2 cut(s)	324, 995
TatI	WGTACW	3 cut(s)	363, 414, 1123
TfiI	GAWTC	8 cut(s)	65, 256, 586, 659, 731, 752, 848, 1142
Tru1I	TTAA	6 cut(s)	215, 764, 876, 1049, 1232, 1683
Tru9I	TTAA	6 cut(s)	215, 764, 876, 1049, 1232, 1683
TscAI	CASTG	4 cut(s)	358, 1287, 1510, 1620
TseFI	GTSAC	5 cut(s)	613, 693, 1196, 1611, 1706
TseI	GCWGC	3 cut(s)	454, 949, 1285
Tsp45I	GTSAC	5 cut(s)	613, 693, 1196, 1611, 1706
TspDTI	ATGAA	8 cut(s)	170, 235, 548, 899, 1109, 1489, 1552, 1658
TspGWI	ACGGA	3 cut(s)	249, 435, 820
TspRI	CASTG	4 cut(s)	358, 1287, 1510, 1620
VpaK11BI	GGWCC	3 cut(s)	336, 978, 1213
XapI	RAATTY	6 cut(s)	602, 620, 1237, 1346, 1352, 1496
XceI	RCATGY	1 cut(s)	461
XhoI	CTCGAG	1 cut(s)	627
XmiI	GTMKAC	2 cut(s)	18, 24
XspI	CTAG	2 cut(s)	1655, 1716
ZraI	GACGTC	1 cut(s)	22
Zsp2I	ATGCAT	1 cut(s)	844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.