Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0004943

Physical Location & Seq

Genomic Coordinates Reverse (-)

55834934 .. 55836454

Gene Structure 1521 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00261620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGCAGGAACCGGAGCTCCACGACCTCTCCGACAACGCCGAGGTGGTTTACATGAAGGATAATGTGAGCATCCACCACGCCATGCTTGCATCAGAGAGGATTAGTGGACGATTAAGGCTAATCAAGAAGGGCTCTTGTCTATTCATGGCATGGATTCCGTACTCAAACGCCATGATTTGTGAGAAAGATAGAATTGTTTATAGTATAAGGGAGGTGCCATTGACAGAGGTTCGGTCCATTCGACGCCAAACTGGATGGCAGTTCATTATCGTCGTTTTGGCATCTGGACTTGCGCTTCCCCCTCTCTACTTTTACAACGGAGGAGTCAAGGAGTTCCTTGCTACAATTAAGCAGCATGTGTCTATTGTGATATCAGCTGAGGATGATAATGTATTTCTTGTCAATGATTTTCAAAATCCTCTAACAACTATAATTTCGAGGCAAAGGCAAAAGGGTCATGATCATCATGCACGAGATCTCTCGATTCAAGTGTTGGAAAAATTCTCTCTCGTGACGAAATTTGCTCGAGAAAAAACTTGGCAACCCTTCTGTGGTGATTCGAACAACGTCTCTGATAGAAGTCCAGTCTTGTCACCTTTGGGGTGTGATGAGTGGTACACCTTGTTGGATTCTCAAGGGCGGATCATGGATTCAGAAGCTTTAAGGAAGAGAGTATTTTATGGGGGAGTTGAGCACAAATTACGGAAAGAGGTCTGGCCATTCTTGCTGGGACACTATGCATATGATTCAACATATACAGAGAGGGAGTATGTTAAGGCAATGAAGAAAGCAGAGTTTGAGACACTAAAGAAGCAATGGCAGAGTATCTCGGCTATCTCCCCAGAGCAGCGCATTATCGACAAAGATGTGGTGAGGACCGACAGATGTCTCTCCTTCTACAATGGGGATGATAATCCAAATGTGGATCTGTTGCATGACATATTGTTAACATACTCGTTTTACAACTTGGATATTGGCTACTGTCAGGGTATGAGTGATCTTCTGTCCCCAATATTGTTTGTACTGGGGGATGAGTCAGAATCATTTTGGTGTTTTGTTAGACTGATGGAGCGCCTTGGCCCCAATTTTGACCGTGACCATAAAGGCATCGACTCTCAAATTCTTGCTTTAACTAAGTTGGTGGAGTTGTTAGACAGACCATTGCATAATTACTTTACACAGCGTAACTGCTTGGAGTACCACTTTTGTTACCGCTGGGTTCTGTTACAGTTCAAAAGGGCATTTGAATTCGACAAGACATTGAGATTATGGGAGGCTCTGTGGACACATTATCCATCTGAGCACCTGCACTTGTATGTGTGTGTTGCGATACTCAAGCGATACCGTAGTAAGATCATCGGGGAGCAGATGGATTCCGACACTCTAATCAATTTCAGCAATGAACTGAGTGGTCAAATAAATCTTGATGGCCTTGTGAGGGATGCAGAAGCTCTGTTCATATGTGCTGGTGAGAAGGGTGATGCTTGCATTCCACCTGGAACAACCCTCACTGCCTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUF3548 RabGAP-TBC

Protein Analysis

506

Amino Acids

58.62

Weight (kDa)

6.0

Isoelectric Point (pI)

44.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	232 - 453	3.5e-47	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	311 - 467	7e-13	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52580 AT5G52580 AT5G52580
fragaria_vesca	FvH4_1g02680
malus_domestica	MD02G1027400.v1.1 MD15G1168800.v1.1
prunus_persica	Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1 Prupe.7G247700_v2.0.a1
pyrus_communis	pycom02g02230 pycom15g15050
rosa_chinensis	RchiOBHm_Chr2g0087771 RchiOBHm_Chr7g0194011
rosa_laevigata	RLG00000004223 RLG00000015897
rosa_multiflora	Rmu_sc0021871.1_g000005
rosa_roxburghii	Rroxscaffold_2G00153250 Rroxscaffold_3G00261620
rosa_rugosa	Rorug01G0478700 Rorug07G0013200
rosa_samantha	Rh2AG032900 Rh2CG032700 Rh2DG032500 Rh7AG140400 Rh7BG140900 Rh7CG144400 Rh7DG141700
rosa_wichuraiana	Rw2G002560 Rw7G011980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1314
Acc36I	ACCTGC	1 cut(s)	1314
AccB1I	GGYRCC	1 cut(s)	214
AciI	CCGC	2 cut(s)	640, 1213
AclWI	GGATC	2 cut(s)	650, 933
AcoI	YGGCCR	1 cut(s)	716
AcsI	RAATTY	4 cut(s)	500, 518, 1119, 1247
AcyI	GRCGYC	1 cut(s)	244
AfaI	GTAC	4 cut(s)	161, 617, 1023, 1199
AfiI	CCNNNNNNNGG	2 cut(s)	551, 1438
AgsI	TTSAA	5 cut(s)	413, 488, 750, 1234, 1247
AjnI	CCWGG	1 cut(s)	1495
AloI	GAACNNNNNNTCC	1 cut(s)	32
AluBI	AGCT	4 cut(s)	16, 377, 659, 1451
AluI	AGCT	4 cut(s)	16, 377, 659, 1451
Alw21I	GWGCWC	3 cut(s)	18, 696, 1305
Alw26I	GTCTC	3 cut(s)	574, 794, 893
AlwI	GGATC	2 cut(s)	650, 933
Ama87I	CYCGRG	1 cut(s)	525
AoxI	GGCC	3 cut(s)	716, 1078, 1429
ApeKI	GCWGC	2 cut(s)	352, 847
ApoI	RAATTY	4 cut(s)	500, 518, 1119, 1247
AspLEI	GCGC	3 cut(s)	295, 852, 1074
AspS9I	GGNCC	3 cut(s)	234, 876, 1079
AsuHPI	GGTGA	5 cut(s)	566, 585, 883, 1481, 1490
AsuII	TTCGAA	1 cut(s)	560
AvaI	CYCGRG	1 cut(s)	525
AvaII	GGWCC	2 cut(s)	234, 876
BaeI	ACNNNNGTAYC	2 cut(s)	1333, 1366
BalI	TGGCCA	1 cut(s)	718
BanI	GGYRCC	1 cut(s)	214
BanII	GRGCYC	2 cut(s)	18, 134
BauI	CACGAG	2 cut(s)	471, 509
Bbv12I	GWGCWC	3 cut(s)	18, 696, 1305
BbvCI	CCTCAGC	1 cut(s)	378
BbvI	GCAGC	2 cut(s)	364, 859
BccI	CCATC	5 cut(s)	249, 1060, 1303, 1363, 1421
BciT130I	CCWGG	1 cut(s)	1497
BclI	TGATCA	1 cut(s)	460
BcoDI	GTCTC	3 cut(s)	574, 794, 893
BfoI	RGCGCY	1 cut(s)	1075
BfuAI	ACCTGC	1 cut(s)	1314
BglII	AGATCT	1 cut(s)	475
BisI	GCNGC	2 cut(s)	353, 848
BlsI	GCNGC	2 cut(s)	354, 849
Bme1390I	CCNGG	1 cut(s)	1497
Bme18I	GGWCC	2 cut(s)	234, 876
BmeT110I	CYCGRG	1 cut(s)	525
BmgT120I	GGNCC	3 cut(s)	234, 876, 1079
BmiI	GGNNCC	3 cut(s)	9, 216, 1081
BmrFI	CCNGG	1 cut(s)	1497
BmrI	ACTGGG	1 cut(s)	1034
BmsI	GCATC	6 cut(s)	78, 98, 290, 1116, 1432, 1471
BmuI	ACTGGG	1 cut(s)	1034
BoxI	GACNNNNGTC	1 cut(s)	885
Bpu10I	CCTNAGC	1 cut(s)	378
Bpu14I	TTCGAA	1 cut(s)	560
BpuEI	CTTGAG	2 cut(s)	618, 1319
BsaBI	GATNNNNATC	1 cut(s)	912
BsaHI	GRCGYC	1 cut(s)	244
BsaJI	CCNNGG	2 cut(s)	39, 1075
BsaWI	WCCGGW	1 cut(s)	10
BsaXI	ACNNNNNCTCC	5 cut(s)	11, 30, 41, 1265, 1295
Bsc4I	CCNNNNNNNGG	2 cut(s)	551, 1438
Bse1I	ACTGG	3 cut(s)	256, 584, 1029
Bse3DI	GCAATG	4 cut(s)	786, 821, 1160, 1405
Bse8I	GATNNNNATC	1 cut(s)	912
BseBI	CCWGG	1 cut(s)	1497
BseDI	CCNNGG	2 cut(s)	39, 1075
BseGI	GGATG	6 cut(s)	69, 260, 388, 913, 1036, 1447
BseJI	GATNNNNATC	1 cut(s)	912
BseLI	CCNNNNNNNGG	2 cut(s)	551, 1438
BseMI	GCAATG	4 cut(s)	786, 821, 1160, 1405
BseMII	CTCAG	3 cut(s)	369, 1290, 1397
BseNI	ACTGG	3 cut(s)	256, 584, 1029
BseRI	GAGGAG	1 cut(s)	336
BseXI	GCAGC	2 cut(s)	364, 859
BseYI	CCCAGC	2 cut(s)	727, 1215
BsgI	GTGCAG	1 cut(s)	1292
BshFI	GGCC	3 cut(s)	718, 1080, 1431
BshNI	GGYRCC	1 cut(s)	214
BsiHKAI	GWGCWC	3 cut(s)	18, 696, 1305
BsiHKCI	CYCGRG	1 cut(s)	525
BsiSI	CCGG	1 cut(s)	11
BslFI	GGGAC	2 cut(s)	744, 991
BslI	CCNNNNNNNGG	2 cut(s)	551, 1438
BsmAI	GTCTC	3 cut(s)	574, 794, 893
BsmBI	CGTCTC	1 cut(s)	574
BsmFI	GGGAC	2 cut(s)	744, 991
BsmI	GAATGC	1 cut(s)	1488
BsnI	GGCC	3 cut(s)	718, 1080, 1431
BsoBI	CYCGRG	1 cut(s)	525
Bsp119I	TTCGAA	1 cut(s)	560
Bsp1286I	GDGCHC	4 cut(s)	18, 134, 696, 1305
Bsp143I	GATC	6 cut(s)	460, 475, 642, 925, 997, 1353
BspACI	CCGC	2 cut(s)	640, 1213
BspANI	GGCC	3 cut(s)	718, 1080, 1431
BspCNI	CTCAG	3 cut(s)	370, 1291, 1398
BspHI	TCATGA	1 cut(s)	457
BspLI	GGNNCC	3 cut(s)	9, 216, 1081
BspMI	ACCTGC	1 cut(s)	1314
BspPI	GGATC	2 cut(s)	650, 933
BspT104I	TTCGAA	1 cut(s)	560
BspT107I	GGYRCC	1 cut(s)	214
BsrDI	GCAATG	4 cut(s)	786, 821, 1160, 1405
BsrI	ACTGG	3 cut(s)	256, 584, 1029
BssECI	CCNNGG	2 cut(s)	39, 1075
BssMI	GATC	6 cut(s)	460, 475, 642, 925, 997, 1353
BssNI	GRCGYC	1 cut(s)	244
BssSI	CACGAG	2 cut(s)	471, 509
BssT1I	CCWWGG	1 cut(s)	1075
Bst2BI	CACGAG	2 cut(s)	471, 509
Bst2UI	CCWGG	1 cut(s)	1497
Bst4CI	ACNGT	4 cut(s)	983, 1094, 1230, 1346
Bst6I	CTCTTC	1 cut(s)	662
BstACI	GRCGYC	1 cut(s)	244
BstBI	TTCGAA	1 cut(s)	560
BstC8I	GCNNGC	2 cut(s)	87, 1486
BstDEI	CTNAG	4 cut(s)	378, 1134, 1299, 1406
BstF5I	GGATG	6 cut(s)	69, 260, 388, 913, 1036, 1447
BstH2I	RGCGCY	1 cut(s)	1075
BstHHI	GCGC	3 cut(s)	295, 852, 1074
BstKTI	GATC	6 cut(s)	463, 478, 645, 928, 1000, 1356
BstMAI	GTCTC	3 cut(s)	574, 794, 893
BstMBI	GATC	6 cut(s)	460, 475, 642, 925, 997, 1353
BstMWI	GCNNNNNNNGC	2 cut(s)	86, 724
BstNI	CCWGG	1 cut(s)	1497
BstNSI	RCATGY	1 cut(s)	359
BstPAI	GACNNNNGTC	1 cut(s)	885
BstSCI	CCNGG	1 cut(s)	1495
BstV1I	GCAGC	2 cut(s)	364, 859
BstX2I	RGATCY	2 cut(s)	475, 925
BstYI	RGATCY	2 cut(s)	475, 925
BsuRI	GGCC	3 cut(s)	718, 1080, 1431
BtsCI	GGATG	6 cut(s)	69, 260, 388, 913, 1036, 1447
BtsI	GCAGTG	1 cut(s)	1509
BtsIMutI	CAGTG	1 cut(s)	1509
BveI	ACCTGC	1 cut(s)	1314
Cac8I	GCNNGC	2 cut(s)	87, 1486
CciI	TCATGA	1 cut(s)	457
CfoI	GCGC	3 cut(s)	295, 852, 1074
Cfr13I	GGNCC	3 cut(s)	234, 876, 1079
CseI	GACGC	1 cut(s)	252
Csp6I	GTAC	4 cut(s)	160, 616, 1022, 1198
CviQI	GTAC	4 cut(s)	160, 616, 1022, 1198
DdeI	CTNAG	4 cut(s)	378, 1134, 1299, 1406
DpnI	GATC	6 cut(s)	462, 477, 644, 927, 999, 1355
DpnII	GATC	6 cut(s)	460, 475, 642, 925, 997, 1353
EaeI	YGGCCR	1 cut(s)	716
Eam1104I	CTCTTC	1 cut(s)	662
EarI	CTCTTC	1 cut(s)	662
EciI	GGCGGA	1 cut(s)	655
Ecl136II	GAGCTC	1 cut(s)	16
Eco130I	CCWWGG	1 cut(s)	1075
Eco24I	GRGCYC	2 cut(s)	18, 134
Eco32I	GATATC	1 cut(s)	372
Eco47I	GGWCC	2 cut(s)	234, 876
Eco53kI	GAGCTC	1 cut(s)	16
Eco88I	CYCGRG	1 cut(s)	525
EcoICRI	GAGCTC	1 cut(s)	16
EcoRI	GAATTC	1 cut(s)	1247
EcoRII	CCWGG	1 cut(s)	1495
EcoRV	GATATC	1 cut(s)	372
EcoT14I	CCWWGG	1 cut(s)	1075
EcoT22I	ATGCAT	1 cut(s)	742
EcoT38I	GRGCYC	2 cut(s)	18, 134
ErhI	CCWWGG	1 cut(s)	1075
Esp3I	CGTCTC	1 cut(s)	574
FaqI	GGGAC	2 cut(s)	744, 991
FauNDI	CATATG	2 cut(s)	742, 1460
FbaI	TGATCA	1 cut(s)	460
Fnu4HI	GCNGC	2 cut(s)	353, 848
FokI	GGATG	6 cut(s)	56, 267, 395, 920, 1043, 1454
FriOI	GRGCYC	2 cut(s)	18, 134
Fsp4HI	GCNGC	2 cut(s)	353, 848
GlaI	GCGC	3 cut(s)	294, 851, 1073
GluI	GCNGC	2 cut(s)	353, 848
GsaI	CCCAGC	2 cut(s)	731, 1219
HaeII	RGCGCY	1 cut(s)	1075
HaeIII	GGCC	3 cut(s)	718, 1080, 1431
HapII	CCGG	1 cut(s)	11
HgaI	GACGC	1 cut(s)	252
HhaI	GCGC	3 cut(s)	295, 852, 1074
Hin1I	GRCGYC	1 cut(s)	244
Hin6I	GCGC	3 cut(s)	293, 850, 1072
HinP1I	GCGC	3 cut(s)	293, 850, 1072
HincII	GTYRAC	1 cut(s)	948
HindII	GTYRAC	1 cut(s)	948
HindIII	AAGCTT	1 cut(s)	657
HpaI	GTTAAC	1 cut(s)	948
HpaII	CCGG	1 cut(s)	11
HphI	GGTGA	5 cut(s)	566, 585, 883, 1481, 1490
Hpy166II	GTNNAC	5 cut(s)	49, 107, 618, 948, 1284
Hpy188I	TCNGA	7 cut(s)	31, 94, 574, 655, 1039, 1300, 1378
Hpy188III	TCNNGA	7 cut(s)	124, 285, 458, 481, 511, 527, 1424
Hpy8I	GTNNAC	5 cut(s)	49, 107, 618, 948, 1284
Hpy99I	CGWCG	2 cut(s)	246, 275
HpyAV	CCTTC	5 cut(s)	49, 121, 556, 904, 1468
HpyCH4III	ACNGT	4 cut(s)	983, 1094, 1230, 1346
HpyCH4IV	ACGT	1 cut(s)	567
HpyCH4V	TGCA	9 cut(s)	4, 89, 470, 740, 934, 1165, 1309, 1445, 1488
HpyF10VI	GCNNNNNNNGC	2 cut(s)	86, 724
HpyF3I	CTNAG	4 cut(s)	378, 1134, 1299, 1406
HpySE526I	ACGT	1 cut(s)	567
Hsp92I	GRCGYC	1 cut(s)	244
HspAI	GCGC	3 cut(s)	293, 850, 1072
Ksp22I	TGATCA	1 cut(s)	460
KspAI	GTTAAC	1 cut(s)	948
Kzo9I	GATC	6 cut(s)	460, 475, 642, 925, 997, 1353
LmnI	GCTCC	4 cut(s)	13, 21, 1069, 1363
Lsp1109I	GCAGC	2 cut(s)	364, 859
LweI	GCATC	6 cut(s)	78, 98, 290, 1116, 1432, 1471
MaeII	ACGT	1 cut(s)	567
MaeIII	GTNAC	6 cut(s)	511, 591, 1094, 1184, 1208, 1224
MalI	GATC	6 cut(s)	462, 477, 644, 927, 999, 1355
MboI	GATC	6 cut(s)	460, 475, 642, 925, 997, 1353
MboII	GAAGA	3 cut(s)	679, 796, 992
MflI	RGATCY	2 cut(s)	475, 925
MhlI	GDGCHC	4 cut(s)	18, 134, 696, 1305
MlsI	TGGCCA	1 cut(s)	718
MluNI	TGGCCA	1 cut(s)	718
MlyI	GAGTC	3 cut(s)	333, 1043, 1106
MmeI	TCCRAC	4 cut(s)	54, 474, 606, 1401
Mox20I	TGGCCA	1 cut(s)	718
Mph1103I	ATGCAT	1 cut(s)	742
MscI	TGGCCA	1 cut(s)	718
MseI	TTAA	6 cut(s)	113, 348, 662, 774, 947, 1130
MslI	CAYNNNNRTG	2 cut(s)	1048, 1314
Msp20I	TGGCCA	1 cut(s)	718
MspA1I	CMGCKG	2 cut(s)	377, 1215
MspI	CCGG	1 cut(s)	11
MspR9I	CCNGG	1 cut(s)	1497
Mva1269I	GAATGC	1 cut(s)	1488
MvaI	CCWGG	1 cut(s)	1497
MwoI	GCNNNNNNNGC	2 cut(s)	86, 724
NdeI	CATATG	2 cut(s)	742, 1460
NdeII	GATC	6 cut(s)	460, 475, 642, 925, 997, 1353
NlaIV	GGNNCC	3 cut(s)	9, 216, 1081
NmeAIII	GCCGAG	2 cut(s)	64, 809
NmuCI	GTSAC	3 cut(s)	511, 591, 1094
NsiI	ATGCAT	1 cut(s)	742
NspI	RCATGY	1 cut(s)	359
NspV	TTCGAA	1 cut(s)	560
PaeR7I	CTCGAG	1 cut(s)	525
PagI	TCATGA	1 cut(s)	457
PaqCI	CACCTGC	1 cut(s)	1314
PcsI	WCGNNNNNNNCGW	2 cut(s)	27, 238
PctI	GAATGC	1 cut(s)	1488
PfeI	GAWTC	8 cut(s)	154, 484, 557, 629, 650, 746, 1040, 1373
PkrI	GCNGC	2 cut(s)	354, 849
PleI	GAGTC	3 cut(s)	332, 1042, 1106
PpsI	GAGTC	3 cut(s)	332, 1042, 1106
PshAI	GACNNNNGTC	1 cut(s)	885
Psp124BI	GAGCTC	1 cut(s)	18
Psp6I	CCWGG	1 cut(s)	1495
PspFI	CCCAGC	2 cut(s)	727, 1215
PspGI	CCWGG	1 cut(s)	1495
PspN4I	GGNNCC	3 cut(s)	9, 216, 1081
PspPI	GGNCC	3 cut(s)	234, 876, 1079
PsuI	RGATCY	2 cut(s)	475, 925
PvuII	CAGCTG	1 cut(s)	377
RsaI	GTAC	4 cut(s)	161, 617, 1023, 1199
RsaNI	GTAC	4 cut(s)	160, 616, 1022, 1198
RseI	CAYNNNNRTG	2 cut(s)	1048, 1314
SacI	GAGCTC	1 cut(s)	18
SaqAI	TTAA	6 cut(s)	113, 348, 662, 774, 947, 1130
SatI	GCNGC	2 cut(s)	353, 848
Sau3AI	GATC	6 cut(s)	460, 475, 642, 925, 997, 1353
Sau96I	GGNCC	3 cut(s)	234, 876, 1079
SchI	GAGTC	3 cut(s)	333, 1043, 1106
ScrFI	CCNGG	1 cut(s)	1497
SduI	GDGCHC	4 cut(s)	18, 134, 696, 1305
SfaNI	GCATC	6 cut(s)	78, 98, 290, 1116, 1432, 1471
Sfr274I	CTCGAG	1 cut(s)	525
SfuI	TTCGAA	1 cut(s)	560
SinI	GGWCC	2 cut(s)	234, 876
SlaI	CTCGAG	1 cut(s)	525
SmiMI	CAYNNNNRTG	2 cut(s)	1048, 1314
SmlI	CTYRAG	3 cut(s)	525, 633, 1334
SmoI	CTYRAG	3 cut(s)	525, 633, 1334
SsiI	CCGC	2 cut(s)	640, 1213
SspI	AATATT	1 cut(s)	1014
SstI	GAGCTC	1 cut(s)	18
StyD4I	CCNGG	1 cut(s)	1495
StyI	CCWWGG	1 cut(s)	1075
TaaI	ACNGT	4 cut(s)	983, 1094, 1230, 1346
TaiI	ACGT	1 cut(s)	570
TaqI	TCGA	8 cut(s)	241, 437, 482, 526, 560, 858, 1110, 1251
TaqII	GACCGA	2 cut(s)	222, 893
TatI	WGTACW	1 cut(s)	1021
TfiI	GAWTC	8 cut(s)	154, 484, 557, 629, 650, 746, 1040, 1373
Tru1I	TTAA	6 cut(s)	113, 348, 662, 774, 947, 1130
Tru9I	TTAA	6 cut(s)	113, 348, 662, 774, 947, 1130
TscAI	CASTG	1 cut(s)	1516
TseFI	GTSAC	3 cut(s)	511, 591, 1094
TseI	GCWGC	2 cut(s)	352, 847
Tsp45I	GTSAC	3 cut(s)	511, 591, 1094
TspDTI	ATGAA	6 cut(s)	68, 133, 253, 797, 1416, 1447
TspGWI	ACGGA	3 cut(s)	147, 333, 718
TspRI	CASTG	1 cut(s)	1516
VpaK11BI	GGWCC	2 cut(s)	234, 876
XapI	RAATTY	4 cut(s)	500, 518, 1119, 1247
XceI	RCATGY	1 cut(s)	359
XhoI	CTCGAG	1 cut(s)	525
Zsp2I	ATGCAT	1 cut(s)	742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.