Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0013087

Physical Location & Seq

Genomic Coordinates Forward (+)

19859862 .. 19861562

Gene Structure 1701 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1241200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGCAAGGGTTTGCACCCGTGAACTCTTTCGATTCCGGAGGTCCATTTTCTCACACCTCGCTTCCAACCCATCAAAATTCAATCTTTCCTTGCCATCCTCCCCATTTTCCTCCTCTTCGTTCGAACCCTCTGTCAACCGCTACATATTTTCGCTTCTCGATTCGTGTCAGAGCTTGATCCAGATCACCCAACTCCACGCCCATTTGATCACCCGGGGCCTTTTCGATTCGTTTTGGGCCCGGAAGTTGCTCAATAGCTATTACTATTTCGGCGATTTCGATTATACGATATGGGTTTTCGTTTACATTGATGCTCCTGGTAGATTTTGCGTTAATACAGTTATTAAGGCGTACTCACTGAGTTCGGCGCCGGTCCGAGCTTTGGTGGTGTATTTGGAATGGCTGAGGAATGGGTTTGTTCCCAACAGCTATACTTTCATACCGGTTTTCGGGTCGTGTGCGAAAATGGGTTGTGCTGAATCTGGGAGAACATGCCATGGGCAGGTTGTGAAATATGGGGTGGACTCTGTGCTGCATGTGCAGAACTCATTAATTCATATGTATTGTCGTTGTGGGGAATTAGAGCTTGCCAGGAAGGTGTTTGATGAAATGCCTGAGAGGGACTTGGTGTCTTGGAATGCAATTGTCGATGGGAATGCCAGATTTGGTGATATTGAGGTTGCACGTAGGTTGTTTGATGAAATGCCTGAGAGAAATGTGGTTTCTTGGAATGTTATGCTTGGTGGGTACTGGAAGGGAGGGAAGCCTGAGTGTGCATTGAAGTTGTTTAGGAAAATGGTGGGCATGGGATTGAGGGGGAACGAAACTACCATGGTGAATATGCTTGCGGCTTGTGGTCGGTCTGCTAGACTAAATGAAGGAAGGTCAGTTCATGGATGTCTAATTAGGACATTCTTGGAGTGGAATATATTTCTCAACACAGCTTTGATCGATATGTATTGTAAATGTGAAAGGGTGCAAGTGGCGCGTTTGGTATTTGAGAGCACGGCGTATAGGAATCTGGTTTGTTGGAATGCAATGATTTTGGGGCATTGCATTCATGGAAATCCTGAAGATGGATTTAACCTATATAGAGAAATGGTGGGTAGAACAAAGTCAAGAGATGGAGAAACAATCCATGAGAAGGAGAGTTCGAGGCCAGATGAAGATCGGGAAGGAATTATCCCAGATGAAGTAACTTTTATAGGTGTTCTTTGTGCCTGTGCCCGCTCTGGATTGGTAAGAGAAGCCAGAGATTACTTCAGCCAAATGATCAATGTCTTCCAAGTAAAGCCCAATTTTGCACACTATTGGTGCATGGCTAATGCTTTGGCTAGTGTGGGGCTTAGACAAGAGGCAGAGGGAATAATTAGGAACATGCCGGAGGTTGCTGTGGACTTGGCACCGGAATCCTTGGCATGGGCTAGTCTGCTTGGCTCGTGTCGTTTCCAAGGAGATGCGAAGTTGGGAGAAATTGCAAAGTCTCTCATTGAAAAGGAACCTCAGAACATTGCTTACTATCGGTTGCTGCTGAATGTCTATGCCGTGTCAGGTCAATGGGAGAATGTTACTCAGGTAAACAAGATGATGAAAGAAATGAAGTTGGGAAGAATCCCCGGATGCAATCTTGTGGACTTGAATGAAATTGTTCATGAGCTCAGAGTTGGAAGACATTATCAAGTTGACCTTGTAGACTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

567

Amino Acids

64.33

Weight (kDa)

8.0

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	182 - 208	1.8e-06	PPR repeat
PPR_1	PF12854	182 - 204	2.5e-06	PPR repeat
PPR_2	PF13041	238 - 286	1.4e-08	PPR repeat family
PPR	PF01535	241 - 271	3.9e-07	PPR repeat
E_motif	PF20431	488 - 544	6.3e-10	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51320
malus_domestica	MD15G1241200.v1.1
prunus_persica	Prupe.7G172800_v2.0.a1
pyrus_communis	pycom02g09790 pycom15g21270
rosa_chinensis	RchiOBHm_Chr2g0098771
rosa_laevigata	RLG00000016826 RLG00000037003
rosa_multiflora	Rmu_sc0002776.1_g000032 Rmu_sc0004816.1_g000008
rosa_roxburghii	Rroxscaffold_2G00143720
rosa_rugosa	Rorug02G0074800
rosa_samantha	Rh2AG122400 Rh2BG126100 Rh2CG127000 Rh2DG128100 Rh7DG389800
rosa_wichuraiana	Rw0G004250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	493
AccB1I	GGYRCC	2 cut(s)	367, 1402
AccBSI	CCGCTC	1 cut(s)	1230
AccI	GTMKAC	1 cut(s)	1692
AccII	CGCG	1 cut(s)	988
AccIII	TCCGGA	1 cut(s)	36
AciI	CCGC	3 cut(s)	139, 848, 1228
AclWI	GGATC	1 cut(s)	172
AcsI	RAATTY	1 cut(s)	77
AcuI	CTGAAG	2 cut(s)	1092, 1246
AcyI	GRCGYC	1 cut(s)	368
AfaI	GTAC	2 cut(s)	353, 749
AfiI	CCNNNNNNNGG	6 cut(s)	382, 449, 502, 1076, 1144, 1419
AgeI	ACCGGT	1 cut(s)	442
AgsI	TTSAA	4 cut(s)	82, 781, 1493, 1639
AhdI	GACNNNNNGTC	1 cut(s)	628
AjnI	CCWGG	2 cut(s)	316, 590
AloI	GAACNNNNNNTCC	2 cut(s)	873, 905
AluBI	AGCT	7 cut(s)	174, 258, 380, 429, 586, 944, 1657
AluI	AGCT	7 cut(s)	174, 258, 380, 429, 586, 944, 1657
Alw21I	GWGCWC	2 cut(s)	1007, 1659
Alw26I	GTCTC	1 cut(s)	1488
AlwI	GGATC	1 cut(s)	172
Ama87I	CYCGRG	1 cut(s)	213
Aor13HI	TCCGGA	1 cut(s)	36
AoxI	GGCC	3 cut(s)	217, 237, 1157
ApaI	GGGCCC	1 cut(s)	241
ApeKI	GCWGC	2 cut(s)	532, 1528
ApoI	RAATTY	1 cut(s)	77
ArsI	GACNNNNNNTTYG	2 cut(s)	117, 149
AseI	ATTAAT	1 cut(s)	551
AsiGI	ACCGGT	1 cut(s)	442
Asp700I	GAANNNNTTC	2 cut(s)	27, 1647
AspLEI	GCGC	2 cut(s)	370, 988
AspS9I	GGNCC	5 cut(s)	42, 217, 237, 238, 373
AsuC2I	CCSGG	4 cut(s)	214, 215, 241, 1617
AsuHPI	GGTGA	4 cut(s)	178, 202, 680, 847
AsuII	TTCGAA	1 cut(s)	123
AvaI	CYCGRG	1 cut(s)	213
AvaII	GGWCC	2 cut(s)	42, 373
BaeGI	GKGCMC	2 cut(s)	241, 1228
BanI	GGYRCC	2 cut(s)	367, 1402
BanII	GRGCYC	2 cut(s)	241, 1659
BauI	CACGAG	1 cut(s)	1438
BbsI	GAAGAC	2 cut(s)	1273, 1675
Bbv12I	GWGCWC	2 cut(s)	1007, 1659
BbvCI	CCTCAGC	1 cut(s)	404
BbvI	GCAGC	2 cut(s)	519, 1515
BccI	CCATC	5 cut(s)	79, 103, 644, 1070, 1118
BceAI	ACGGC	2 cut(s)	1023, 1529
BcgI	CGANNNNNNTGC	2 cut(s)	638, 672
BciT130I	CCWGG	2 cut(s)	318, 592
BclI	TGATCA	2 cut(s)	207, 1272
BcnI	CCSGG	4 cut(s)	214, 215, 241, 1617
BcoDI	GTCTC	1 cut(s)	1488
BfaI	CTAG	3 cut(s)	867, 1335, 1425
BfoI	RGCGCY	1 cut(s)	371
BfuAI	ACCTGC	1 cut(s)	493
BisI	GCNGC	3 cut(s)	533, 849, 1529
BlsI	GCNGC	3 cut(s)	534, 850, 1530
Bme1390I	CCNGG	6 cut(s)	214, 215, 241, 318, 592, 1617
Bme18I	GGWCC	2 cut(s)	42, 373
BmeRI	GACNNNNNGTC	1 cut(s)	628
BmeT110I	CYCGRG	1 cut(s)	213
BmgT120I	GGNCC	5 cut(s)	42, 217, 237, 238, 373
BmiI	GGNNCC	5 cut(s)	218, 239, 369, 1404, 1500
BmrFI	CCNGG	6 cut(s)	214, 215, 241, 318, 592, 1617
BmsI	GCATC	3 cut(s)	301, 1447, 1610
BpiI	GAAGAC	2 cut(s)	1273, 1675
Bpu10I	CCTNAGC	1 cut(s)	404
Bpu14I	TTCGAA	1 cut(s)	123
BpuMI	CCSGG	4 cut(s)	214, 215, 241, 1617
Bsa29I	ATCGAT	1 cut(s)	951
BsaAI	YACGTR	1 cut(s)	686
BsaBI	GATNNNNATC	2 cut(s)	182, 1167
BsaHI	GRCGYC	1 cut(s)	368
BsaJI	CCNNGG	7 cut(s)	213, 214, 496, 831, 1413, 1450, 1615
BsaWI	WCCGGW	3 cut(s)	36, 442, 1405
Bsc4I	CCNNNNNNNGG	6 cut(s)	382, 449, 502, 1076, 1144, 1419
Bse118I	RCCGGY	2 cut(s)	370, 442
Bse1I	ACTGG	1 cut(s)	755
Bse3DI	GCAATG	3 cut(s)	1044, 1051, 1509
Bse8I	GATNNNNATC	2 cut(s)	182, 1167
BseAI	TCCGGA	1 cut(s)	36
BseBI	CCWGG	2 cut(s)	318, 592
BseCI	ATCGAT	1 cut(s)	951
BseDI	CCNNGG	7 cut(s)	213, 214, 496, 831, 1413, 1450, 1615
BseGI	GGATG	3 cut(s)	95, 902, 1625
BseJI	GATNNNNATC	2 cut(s)	182, 1167
BseLI	CCNNNNNNNGG	6 cut(s)	382, 449, 502, 1076, 1144, 1419
BseMI	GCAATG	3 cut(s)	1044, 1051, 1509
BseMII	CTCAG	8 cut(s)	350, 395, 606, 699, 759, 1517, 1586, 1672
BseNI	ACTGG	1 cut(s)	755
BseRI	GAGGAG	1 cut(s)	103
BseSI	GKGCMC	2 cut(s)	241, 1228
BseXI	GCAGC	2 cut(s)	519, 1515
BsgI	GTGCAG	1 cut(s)	560
Bsh1236I	CGCG	1 cut(s)	988
BshFI	GGCC	3 cut(s)	219, 239, 1159
BshNI	GGYRCC	2 cut(s)	367, 1402
BshTI	ACCGGT	1 cut(s)	442
BshVI	ATCGAT	1 cut(s)	951
BsiHKAI	GWGCWC	2 cut(s)	1007, 1659
BsiHKCI	CYCGRG	1 cut(s)	213
BsiSI	CCGG	8 cut(s)	37, 214, 241, 371, 443, 1382, 1406, 1617
BslFI	GGGAC	1 cut(s)	635
BslI	CCNNNNNNNGG	6 cut(s)	382, 449, 502, 1076, 1144, 1419
BsmAI	GTCTC	1 cut(s)	1488
BsmFI	GGGAC	1 cut(s)	635
BsmI	GAATGC	4 cut(s)	643, 661, 1039, 1056
BsnI	GGCC	3 cut(s)	219, 239, 1159
BsoBI	CYCGRG	1 cut(s)	213
Bsp119I	TTCGAA	1 cut(s)	123
Bsp120I	GGGCCC	1 cut(s)	237
Bsp1286I	GDGCHC	4 cut(s)	241, 1007, 1228, 1659
Bsp13I	TCCGGA	1 cut(s)	36
Bsp143I	GATC	6 cut(s)	177, 183, 207, 948, 1168, 1272
Bsp19I	CCATGG	2 cut(s)	496, 831
BspACI	CCGC	3 cut(s)	139, 848, 1228
BspANI	GGCC	3 cut(s)	219, 239, 1159
BspCNI	CTCAG	8 cut(s)	351, 396, 607, 700, 760, 1516, 1585, 1671
BspDI	ATCGAT	1 cut(s)	951
BspEI	TCCGGA	1 cut(s)	36
BspFNI	CGCG	1 cut(s)	988
BspHI	TCATGA	1 cut(s)	1651
BspLI	GGNNCC	5 cut(s)	218, 239, 369, 1404, 1500
BspMI	ACCTGC	1 cut(s)	493
BspPI	GGATC	1 cut(s)	172
BspT104I	TTCGAA	1 cut(s)	123
BspT107I	GGYRCC	2 cut(s)	367, 1402
BsrBI	CCGCTC	1 cut(s)	1230
BsrDI	GCAATG	3 cut(s)	1044, 1051, 1509
BsrFI	RCCGGY	2 cut(s)	370, 442
BsrI	ACTGG	1 cut(s)	755
BssAI	RCCGGY	2 cut(s)	370, 442
BssECI	CCNNGG	7 cut(s)	213, 214, 496, 831, 1413, 1450, 1615
BssMI	GATC	6 cut(s)	177, 183, 207, 948, 1168, 1272
BssNI	GRCGYC	1 cut(s)	368
BssSI	CACGAG	1 cut(s)	1438
BssT1I	CCWWGG	4 cut(s)	496, 831, 1413, 1450
Bst2BI	CACGAG	1 cut(s)	1438
Bst2UI	CCWGG	2 cut(s)	318, 592
Bst4CI	ACNGT	1 cut(s)	340
Bst6I	CTCTTC	1 cut(s)	121
BstACI	GRCGYC	1 cut(s)	368
BstBAI	YACGTR	1 cut(s)	686
BstBI	TTCGAA	1 cut(s)	123
BstC8I	GCNNGC	3 cut(s)	588, 846, 1228
BstDEI	CTNAG	9 cut(s)	359, 404, 615, 708, 768, 1346, 1503, 1572, 1658
BstDSI	CCRYGG	2 cut(s)	496, 831
BstF5I	GGATG	3 cut(s)	95, 902, 1625
BstFNI	CGCG	1 cut(s)	988
BstH2I	RGCGCY	1 cut(s)	371
BstHHI	GCGC	2 cut(s)	370, 988
BstKTI	GATC	6 cut(s)	180, 186, 210, 951, 1171, 1275
BstMAI	GTCTC	1 cut(s)	1488
BstMBI	GATC	6 cut(s)	177, 183, 207, 948, 1168, 1272
BstMWI	GCNNNNNNNGC	2 cut(s)	538, 985
BstNI	CCWGG	2 cut(s)	318, 592
BstNSI	RCATGY	3 cut(s)	495, 539, 1381
BstSCI	CCNGG	6 cut(s)	212, 213, 239, 316, 590, 1615
BstSLI	GKGCMC	2 cut(s)	241, 1228
BstUI	CGCG	1 cut(s)	988
BstV1I	GCAGC	2 cut(s)	519, 1515
BstV2I	GAAGAC	2 cut(s)	1273, 1675
Bsu15I	ATCGAT	1 cut(s)	951
BsuRI	GGCC	3 cut(s)	219, 239, 1159
BsuTUI	ATCGAT	1 cut(s)	951
BtgI	CCRYGG	2 cut(s)	496, 831
BtsCI	GGATG	3 cut(s)	95, 902, 1625
BtsIMutI	CAGTG	1 cut(s)	356
BveI	ACCTGC	1 cut(s)	493
Cac8I	GCNNGC	3 cut(s)	588, 846, 1228
CciI	TCATGA	1 cut(s)	1651
CfoI	GCGC	2 cut(s)	370, 988
Cfr10I	RCCGGY	2 cut(s)	370, 442
Cfr13I	GGNCC	5 cut(s)	42, 217, 237, 238, 373
Cfr9I	CCCGGG	1 cut(s)	213
ClaI	ATCGAT	1 cut(s)	951
CpoI	CGGWCCG	1 cut(s)	373
Csp6I	GTAC	2 cut(s)	352, 748
CspAI	ACCGGT	1 cut(s)	442
CspI	CGGWCCG	1 cut(s)	373
CviQI	GTAC	2 cut(s)	352, 748
DdeI	CTNAG	9 cut(s)	359, 404, 615, 708, 768, 1346, 1503, 1572, 1658
DinI	GGCGCC	1 cut(s)	369
DpnI	GATC	6 cut(s)	179, 185, 209, 950, 1170, 1274
DpnII	GATC	6 cut(s)	177, 183, 207, 948, 1168, 1272
DriI	GACNNNNNGTC	1 cut(s)	628
Eam1104I	CTCTTC	1 cut(s)	121
Eam1105I	GACNNNNNGTC	1 cut(s)	628
EarI	CTCTTC	1 cut(s)	121
Ecl136II	GAGCTC	1 cut(s)	1657
Eco130I	CCWWGG	4 cut(s)	496, 831, 1413, 1450
Eco24I	GRGCYC	2 cut(s)	241, 1659
Eco47I	GGWCC	2 cut(s)	42, 373
Eco53kI	GAGCTC	1 cut(s)	1657
Eco57I	CTGAAG	2 cut(s)	1092, 1246
Eco88I	CYCGRG	1 cut(s)	213
EcoICRI	GAGCTC	1 cut(s)	1657
EcoO109I	RGGNCCY	1 cut(s)	217
EcoRII	CCWGG	2 cut(s)	316, 590
EcoT14I	CCWWGG	4 cut(s)	496, 831, 1413, 1450
EcoT38I	GRGCYC	2 cut(s)	241, 1659
EgeI	GGCGCC	1 cut(s)	369
EheI	GGCGCC	1 cut(s)	369
ErhI	CCWWGG	4 cut(s)	496, 831, 1413, 1450
FalI	AAGNNNNNCTT	1 cut(s)	1671
FaqI	GGGAC	1 cut(s)	635
FauI	CCCGC	1 cut(s)	1235
FauNDI	CATATG	1 cut(s)	558
FbaI	TGATCA	2 cut(s)	207, 1272
FblI	GTMKAC	1 cut(s)	1692
Fnu4HI	GCNGC	3 cut(s)	533, 849, 1529
FokI	GGATG	3 cut(s)	82, 909, 1632
FriOI	GRGCYC	2 cut(s)	241, 1659
Fsp4HI	GCNGC	3 cut(s)	533, 849, 1529
FspBI	CTAG	3 cut(s)	867, 1335, 1425
GlaI	GCGC	2 cut(s)	369, 987
GluI	GCNGC	3 cut(s)	533, 849, 1529
HaeII	RGCGCY	1 cut(s)	371
HaeIII	GGCC	3 cut(s)	219, 239, 1159
HapII	CCGG	8 cut(s)	37, 214, 241, 371, 443, 1382, 1406, 1617
HhaI	GCGC	2 cut(s)	370, 988
Hin1I	GRCGYC	1 cut(s)	368
Hin6I	GCGC	2 cut(s)	368, 986
HinP1I	GCGC	2 cut(s)	368, 986
HincII	GTYRAC	2 cut(s)	136, 1684
HindII	GTYRAC	2 cut(s)	136, 1684
HinfI	GANTC	9 cut(s)	33, 161, 227, 479, 524, 1018, 1409, 1611, 1694
HpaII	CCGG	8 cut(s)	37, 214, 241, 371, 443, 1382, 1406, 1617
HphI	GGTGA	4 cut(s)	178, 202, 680, 847
Hpy166II	GTNNAC	9 cut(s)	23, 136, 304, 523, 1396, 1579, 1633, 1684, 1693
Hpy188I	TCNGA	4 cut(s)	171, 377, 1506, 1661
Hpy188III	TCNNGA	9 cut(s)	37, 158, 181, 1070, 1119, 1172, 1233, 1652, 1698
Hpy8I	GTNNAC	9 cut(s)	23, 136, 304, 523, 1396, 1579, 1633, 1684, 1693
HpyAV	CCTTC	6 cut(s)	589, 748, 872, 876, 1138, 1169
HpyCH4III	ACNGT	1 cut(s)	340
HpyCH4IV	ACGT	1 cut(s)	685
HpyF10VI	GCNNNNNNNGC	2 cut(s)	538, 985
HpyF3I	CTNAG	9 cut(s)	359, 404, 615, 708, 768, 1346, 1503, 1572, 1658
HpySE526I	ACGT	1 cut(s)	685
Hsp92I	GRCGYC	1 cut(s)	368
HspAI	GCGC	2 cut(s)	368, 986
KasI	GGCGCC	1 cut(s)	367
Kpn2I	TCCGGA	1 cut(s)	36
Ksp22I	TGATCA	2 cut(s)	207, 1272
Kzo9I	GATC	6 cut(s)	177, 183, 207, 948, 1168, 1272
LmnI	GCTCC	1 cut(s)	319
Lsp1109I	GCAGC	2 cut(s)	519, 1515
LweI	GCATC	3 cut(s)	301, 1447, 1610
MaeI	CTAG	3 cut(s)	867, 1335, 1425
MaeII	ACGT	1 cut(s)	685
MaeIII	GTNAC	2 cut(s)	1195, 1567
MalI	GATC	6 cut(s)	179, 185, 209, 950, 1170, 1274
MbiI	CCGCTC	1 cut(s)	1230
MboI	GATC	6 cut(s)	177, 183, 207, 948, 1168, 1272
MboII	GAAGA	6 cut(s)	108, 1085, 1178, 1273, 1620, 1680
MfeI	CAATTG	1 cut(s)	642
MhlI	GDGCHC	4 cut(s)	241, 1007, 1228, 1659
Mly113I	GGCGCC	1 cut(s)	368
MlyI	GAGTC	2 cut(s)	518, 1688
MmeI	TCCRAC	3 cut(s)	90, 1010, 1645
MroI	TCCGGA	1 cut(s)	36
MroXI	GAANNNNTTC	2 cut(s)	27, 1647
MseI	TTAA	4 cut(s)	333, 345, 551, 1083
MspI	CCGG	8 cut(s)	37, 214, 241, 371, 443, 1382, 1406, 1617
MspR9I	CCNGG	6 cut(s)	214, 215, 241, 318, 592, 1617
MunI	CAATTG	1 cut(s)	642
Mva1269I	GAATGC	4 cut(s)	643, 661, 1039, 1056
MvaI	CCWGG	2 cut(s)	318, 592
MvnI	CGCG	1 cut(s)	988
MwoI	GCNNNNNNNGC	2 cut(s)	538, 985
NarI	GGCGCC	1 cut(s)	368
NciI	CCSGG	4 cut(s)	214, 215, 241, 1617
NcoI	CCATGG	2 cut(s)	496, 831
NdeI	CATATG	1 cut(s)	558
NdeII	GATC	6 cut(s)	177, 183, 207, 948, 1168, 1272
NlaIV	GGNNCC	5 cut(s)	218, 239, 369, 1404, 1500
NspI	RCATGY	3 cut(s)	495, 539, 1381
NspV	TTCGAA	1 cut(s)	123
PagI	TCATGA	1 cut(s)	1651
PcsI	WCGNNNNNNNCGW	1 cut(s)	276
PctI	GAATGC	4 cut(s)	643, 661, 1039, 1056
PdmI	GAANNNNTTC	2 cut(s)	27, 1647
PfeI	GAWTC	7 cut(s)	33, 161, 227, 479, 1018, 1409, 1611
PinAI	ACCGGT	1 cut(s)	442
PkrI	GCNGC	3 cut(s)	534, 850, 1530
PleI	GAGTC	2 cut(s)	518, 1688
PluTI	GGCGCC	1 cut(s)	371
PpsI	GAGTC	2 cut(s)	518, 1688
Ppu21I	YACGTR	1 cut(s)	686
PshBI	ATTAAT	1 cut(s)	551
Psp124BI	GAGCTC	1 cut(s)	1659
Psp6I	CCWGG	2 cut(s)	316, 590
PspGI	CCWGG	2 cut(s)	316, 590
PspN4I	GGNNCC	5 cut(s)	218, 239, 369, 1404, 1500
PspOMI	GGGCCC	1 cut(s)	237
PspPI	GGNCC	5 cut(s)	42, 217, 237, 238, 373
PsrI	GAACNNNNNNTAC	2 cut(s)	1499, 1531
RsaI	GTAC	2 cut(s)	353, 749
RsaNI	GTAC	2 cut(s)	352, 748
Rsr2I	CGGWCCG	1 cut(s)	373
RsrII	CGGWCCG	1 cut(s)	373
SacI	GAGCTC	1 cut(s)	1659
SaqAI	TTAA	4 cut(s)	333, 345, 551, 1083
SatI	GCNGC	3 cut(s)	533, 849, 1529
Sau3AI	GATC	6 cut(s)	177, 183, 207, 948, 1168, 1272
Sau96I	GGNCC	5 cut(s)	42, 217, 237, 238, 373
SchI	GAGTC	2 cut(s)	518, 1688
ScrFI	CCNGG	6 cut(s)	214, 215, 241, 318, 592, 1617
SduI	GDGCHC	4 cut(s)	241, 1007, 1228, 1659
SfaNI	GCATC	3 cut(s)	301, 1447, 1610
SfoI	GGCGCC	1 cut(s)	369
SfuI	TTCGAA	1 cut(s)	123
SinI	GGWCC	2 cut(s)	42, 373
SmaI	CCCGGG	1 cut(s)	215
SsiI	CCGC	3 cut(s)	139, 848, 1228
SspDI	GGCGCC	1 cut(s)	367
SspMI	CTAG	3 cut(s)	867, 1335, 1425
SstI	GAGCTC	1 cut(s)	1659
StyD4I	CCNGG	6 cut(s)	212, 213, 239, 316, 590, 1615
StyI	CCWWGG	4 cut(s)	496, 831, 1413, 1450
TaaI	ACNGT	1 cut(s)	340
TaiI	ACGT	1 cut(s)	688
TaqI	TCGA	8 cut(s)	31, 123, 159, 225, 279, 648, 951, 1154
TaqII	GACCGA	1 cut(s)	849
TauI	GCSGC	1 cut(s)	851
TfiI	GAWTC	7 cut(s)	33, 161, 227, 479, 1018, 1409, 1611
Tru1I	TTAA	4 cut(s)	333, 345, 551, 1083
Tru9I	TTAA	4 cut(s)	333, 345, 551, 1083
TscAI	CASTG	1 cut(s)	363
TseI	GCWGC	2 cut(s)	532, 1528
TspMI	CCCGGG	1 cut(s)	213
TspRI	CASTG	1 cut(s)	363
VpaK11BI	GGWCC	2 cut(s)	42, 373
VspI	ATTAAT	1 cut(s)	551
XapI	RAATTY	1 cut(s)	77
XceI	RCATGY	3 cut(s)	495, 539, 1381
XmaI	CCCGGG	1 cut(s)	213
XmiI	GTMKAC	1 cut(s)	1692
XmnI	GAANNNNTTC	2 cut(s)	27, 1647
XspI	CTAG	3 cut(s)	867, 1335, 1425

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.