Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00162

Orthogroup ID

OG0013087

Physical Location & Seq

Genomic Coordinates Forward (+)

144268 .. 145938

Gene Structure 1671 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G004250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGCGCGCATTTCCACGCGAGAACTCTTTCTCTTTCGCTTTCGCTCCGTTCTCGCAGAACCCACGAGGCCAAATCTTTATATCTCATCCGCACACTACTGCTCTTCTTCTTCTTCTTCTCTTCAACCCTGTTTGCTTAACCCCCGTATCTTGTCGGTTCTGGATTCATGTCAGAGCCTGGCCCAGATCACCCAAATGCACACCCAATTGATCACTTGGGGTCTTTTCGATTCGTTCTGGGCAAGAAAGCTACTCAAGAGCTATTGGGATTATGGCGATATAAATTTTACGATTCTGACCTTCAGGCACATTGAAAAGCCTGGTGCTTTCTGCGTCAACACGGTGATTAAGGCTCATTCGGATAGCTCAGAGCCGGGTCGGGCTTTGGTGGTCTATTTCGAATGGCTGAGAAGAGGGTTTGCTCCCACCAGCTATAGTTTCGTGCCGCTTTTCGGGGCTTGTAGTAAGTTGGGTGATGTCGAGTGTGGGAGGAAATGCCATGGGCAGGTTTTGAAGCATGGGGTTGAGTCTGTGCTGCCTGTGGGGAACTCTTTGATTCATATGTATTGTTGTTGTGGGAGAGTTGAGCTTGCTAGGAAGGTGTTTGATGAAATGCCTAAGAGAGACGTGGTGTCGTGGAATGCGATTGTGGATGGGTATGCTAGGTTTGGGGATTTGAATGTCGCTCATATGGTGTTTGATGCAATGCCTGAGAGAAATGTGGTTGCTTGGAATGCTATGCTTGGTGGGTATTGGAAGGGAGGGAAGCCGGGGTGTGCCTTGAAGTTGTTTAGGGATATGGTGCGGATGGGAATGAAGGCTGATAGTACTGCAATGGTGAATATGCTCGCGGCTTGTGGTCGGTCAGGTAGACTGAAAGAAGGAAGATCAGTTCATGGATATCTATTTAGGGCATTCACTGAGTTGAACGTTGTTGTTGAAACGGCTTTGATCGATATGTATTGTAAATGCAAAAGGGTGGAAGTGGCGCGTCTAGTGTTTGAGAGCATGGCATATAGGAACTTGGTTTGCTGGAATGCTATGATTTTGGGCCATTGTTTTGAGGGAAATCCTGAAGATGGACTTAGCCTGTTTAGTGAAATGTTAGGTAGCACAGAGTCAAACGATGGGGAAACCATCCCAGAGAATAGGTTGTCGAGGCCAACCAACGGCAGAGGGGGAATTCTTCCGGATGAAACTACTTTCATAGGTGTTCTTTGTGCCTGTGCGCGTGCTGGAATGTTAAGAGAAGCCAGAGATTACTTCAGGAAAATGATTAATGTTTTCCATTTAAAGCCCCGGTTTGCACATTATTGGTGCATGGCTAATGTTTATGTTGGTGTGGGGCTAATACAAGAGGCAGAGGAAATGATCAGGAAAATGCCAGAGGTTGCTGAAGATTTGACAAAAGAATCCTTGGCATGGGCTAATGTGCTTGGTTCATGTCGTTTCCAAAAAGATGTTACTGTGGGAGAACAAATTGCAATATCTCTGATTGACATGGAACCTCAAAACATTGCATACTACAGATTGTTGCTGAATGTCTATGCTGCCGCGGGCCAATGGGAGGATGTTGCTTGGGCGAAAGAAATGATGAAAGAAAACAAGGTCAGAAGGCTACCTGGCTGCAATCTTGTAGACCTGAACGAAATAGTTCATCAGAGTTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

556

Amino Acids

62.81

Weight (kDa)

8.28

Isoelectric Point (pI)

43.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	183 - 209	4.4e-06	PPR repeat
PPR_1	PF12854	183 - 205	2.6e-06	PPR repeat
PPR_2	PF13041	208 - 241	8e-06	PPR repeat family
PPR_2	PF13041	239 - 286	3.4e-08	PPR repeat family
PPR	PF01535	242 - 271	4.2e-06	PPR repeat
PPR	PF01535	343 - 369	8e-06	PPR repeat
E_motif	PF20431	487 - 546	3.3e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013087)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51320
malus_domestica	MD15G1241200.v1.1
prunus_persica	Prupe.7G172800_v2.0.a1
pyrus_communis	pycom02g09790 pycom15g21270
rosa_chinensis	RchiOBHm_Chr2g0098771
rosa_laevigata	RLG00000016826 RLG00000037003
rosa_multiflora	Rmu_sc0002776.1_g000032 Rmu_sc0004816.1_g000008
rosa_roxburghii	Rroxscaffold_2G00143720
rosa_rugosa	Rorug02G0074800
rosa_samantha	Rh2AG122400 Rh2BG126100 Rh2CG127000 Rh2DG128100 Rh7DG389800
rosa_wichuraiana	Rw0G004250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	496
AccI	GTMKAC	2 cut(s)	871, 1638
AccII	CGCG	6 cut(s)	7, 19, 851, 991, 1231, 1556
AccIII	TCCGGA	1 cut(s)	1189
AciI	CCGC	6 cut(s)	90, 446, 805, 851, 1554, 1556
AclI	AACGTT	1 cut(s)	930
AcsI	RAATTY	2 cut(s)	283, 1182
AcuI	CTGAAG	4 cut(s)	286, 1095, 1249, 1416
AfaI	GTAC	1 cut(s)	829
AfiI	CCNNNNNNNGG	6 cut(s)	452, 505, 1079, 1169, 1422, 1567
AgsI	TTSAA	7 cut(s)	125, 314, 514, 679, 784, 928, 941
AhdI	GACNNNNNGTC	1 cut(s)	631
AjiI	CACGTC	1 cut(s)	628
AjnI	CCWGG	3 cut(s)	177, 319, 1621
AloI	GAACNNNNNNTCC	2 cut(s)	876, 908
AluBI	AGCT	5 cut(s)	250, 261, 366, 432, 589
AluI	AGCT	5 cut(s)	250, 261, 366, 432, 589
Alw26I	GTCTC	1 cut(s)	618
AlwNI	CAGNNNCTG	1 cut(s)	178
Aor13HI	TCCGGA	1 cut(s)	1189
AoxI	GGCC	5 cut(s)	68, 180, 1051, 1160, 1558
ApeKI	GCWGC	3 cut(s)	535, 1550, 1626
ApoI	RAATTY	2 cut(s)	283, 1182
AseI	ATTAAT	1 cut(s)	1278
Asp700I	GAANNNNTTC	2 cut(s)	27, 1653
AspLEI	GCGC	4 cut(s)	7, 9, 991, 1231
AspS9I	GGNCC	3 cut(s)	181, 1051, 1558
AsuC2I	CCSGG	3 cut(s)	375, 771, 1300
AsuHPI	GGTGA	4 cut(s)	181, 355, 485, 850
AsuII	TTCGAA	1 cut(s)	399
BaeI	ACNNNNGTAYC	2 cut(s)	130, 163
BauI	CACGAG	1 cut(s)	64
BbvI	GCAGC	3 cut(s)	522, 1537, 1613
BccI	CCATC	5 cut(s)	647, 802, 1073, 1121, 1145
BceAI	ACGGC	2 cut(s)	960, 1186
BciT130I	CCWGG	3 cut(s)	179, 321, 1623
BclI	TGATCA	2 cut(s)	210, 1371
BcnI	CCSGG	3 cut(s)	375, 771, 1300
BcoDI	GTCTC	1 cut(s)	618
BfaI	CTAG	3 cut(s)	594, 663, 995
BfmI	CTRYAG	2 cut(s)	433, 1525
BfuAI	ACCTGC	1 cut(s)	496
BisI	GCNGC	6 cut(s)	446, 536, 852, 1551, 1554, 1627
BlsI	GCNGC	6 cut(s)	447, 537, 853, 1552, 1555, 1628
BmcAI	AGTACT	1 cut(s)	829
Bme1390I	CCNGG	6 cut(s)	179, 321, 375, 771, 1300, 1623
BmeRI	GACNNNNNGTC	1 cut(s)	631
BmgBI	CACGTC	1 cut(s)	628
BmgT120I	GGNCC	3 cut(s)	181, 1051, 1558
BmiI	GGNNCC	1 cut(s)	1506
BmrFI	CCNGG	6 cut(s)	179, 321, 375, 771, 1300, 1623
BmsI	GCATC	1 cut(s)	691
Bpu14I	TTCGAA	1 cut(s)	399
BpuEI	CTTGAG	1 cut(s)	239
BpuMI	CCSGG	3 cut(s)	375, 771, 1300
Bsa29I	ATCGAT	1 cut(s)	954
BsaJI	CCNNGG	5 cut(s)	499, 770, 1298, 1416, 1554
BsaWI	WCCGGW	1 cut(s)	1189
Bsc4I	CCNNNNNNNGG	6 cut(s)	452, 505, 1079, 1169, 1422, 1567
Bse3DI	GCAATG	3 cut(s)	711, 840, 1515
BseAI	TCCGGA	1 cut(s)	1189
BseBI	CCWGG	3 cut(s)	179, 321, 1623
BseCI	ATCGAT	1 cut(s)	954
BseDI	CCNNGG	5 cut(s)	499, 770, 1298, 1416, 1554
BseGI	GGATG	6 cut(s)	86, 658, 813, 1137, 1198, 1576
BseLI	CCNNNNNNNGG	6 cut(s)	452, 505, 1079, 1169, 1422, 1567
BseMI	GCAATG	3 cut(s)	711, 840, 1515
BseMII	CTCAG	4 cut(s)	381, 398, 702, 912
BsePI	GCGCGC	1 cut(s)	5
BseXI	GCAGC	3 cut(s)	522, 1537, 1613
Bsh1236I	CGCG	6 cut(s)	7, 19, 851, 991, 1231, 1556
BshFI	GGCC	5 cut(s)	70, 182, 1053, 1162, 1560
BshVI	ATCGAT	1 cut(s)	954
BsiSI	CCGG	4 cut(s)	374, 770, 1190, 1300
BslI	CCNNNNNNNGG	6 cut(s)	452, 505, 1079, 1169, 1422, 1567
BsmAI	GTCTC	1 cut(s)	618
BsmBI	CGTCTC	1 cut(s)	618
BsmI	GAATGC	4 cut(s)	646, 739, 914, 1042
BsnI	GGCC	5 cut(s)	70, 182, 1053, 1162, 1560
Bsp119I	TTCGAA	1 cut(s)	399
Bsp13I	TCCGGA	1 cut(s)	1189
Bsp143I	GATC	5 cut(s)	186, 210, 887, 951, 1371
Bsp19I	CCATGG	1 cut(s)	499
BspACI	CCGC	6 cut(s)	90, 446, 805, 851, 1554, 1556
BspANI	GGCC	5 cut(s)	70, 182, 1053, 1162, 1560
BspCNI	CTCAG	4 cut(s)	380, 399, 703, 913
BspDI	ATCGAT	1 cut(s)	954
BspEI	TCCGGA	1 cut(s)	1189
BspFNI	CGCG	6 cut(s)	7, 19, 851, 991, 1231, 1556
BspLI	GGNNCC	1 cut(s)	1506
BspMI	ACCTGC	1 cut(s)	496
BspQI	GCTCTTC	1 cut(s)	109
BspT104I	TTCGAA	1 cut(s)	399
BsrDI	GCAATG	3 cut(s)	711, 840, 1515
BssECI	CCNNGG	5 cut(s)	499, 770, 1298, 1416, 1554
BssHII	GCGCGC	1 cut(s)	5
BssMI	GATC	5 cut(s)	186, 210, 887, 951, 1371
BssSI	CACGAG	1 cut(s)	64
BssT1I	CCWWGG	2 cut(s)	499, 1416
Bst2BI	CACGAG	1 cut(s)	64
Bst2UI	CCWGG	3 cut(s)	179, 321, 1623
Bst4CI	ACNGT	2 cut(s)	343, 1468
Bst6I	CTCTTC	3 cut(s)	109, 126, 406
BstBI	TTCGAA	1 cut(s)	399
BstC8I	GCNNGC	5 cut(s)	7, 591, 849, 1233, 1558
BstDEI	CTNAG	6 cut(s)	367, 407, 618, 711, 921, 1085
BstDSI	CCRYGG	2 cut(s)	499, 1554
BstF5I	GGATG	6 cut(s)	86, 658, 813, 1137, 1198, 1576
BstFNI	CGCG	6 cut(s)	7, 19, 851, 991, 1231, 1556
BstHHI	GCGC	4 cut(s)	7, 9, 991, 1231
BstKTI	GATC	5 cut(s)	189, 213, 890, 954, 1374
BstMAI	GTCTC	1 cut(s)	618
BstMBI	GATC	5 cut(s)	186, 210, 887, 951, 1371
BstMWI	GCNNNNNNNGC	1 cut(s)	734
BstNI	CCWGG	3 cut(s)	179, 321, 1623
BstSCI	CCNGG	6 cut(s)	177, 319, 373, 769, 1298, 1621
BstSFI	CTRYAG	2 cut(s)	433, 1525
BstUI	CGCG	6 cut(s)	7, 19, 851, 991, 1231, 1556
BstV1I	GCAGC	3 cut(s)	522, 1537, 1613
Bsu15I	ATCGAT	1 cut(s)	954
BsuRI	GGCC	5 cut(s)	70, 182, 1053, 1162, 1560
BsuTUI	ATCGAT	1 cut(s)	954
BtgI	CCRYGG	2 cut(s)	499, 1554
BtrI	CACGTC	1 cut(s)	628
BtsCI	GGATG	6 cut(s)	86, 658, 813, 1137, 1198, 1576
BtsIMutI	CAGTG	1 cut(s)	918
BveI	ACCTGC	1 cut(s)	496
Cac8I	GCNNGC	5 cut(s)	7, 591, 849, 1233, 1558
CaiI	CAGNNNCTG	1 cut(s)	178
CfoI	GCGC	4 cut(s)	7, 9, 991, 1231
Cfr13I	GGNCC	3 cut(s)	181, 1051, 1558
Cfr42I	CCGCGG	1 cut(s)	1557
ClaI	ATCGAT	1 cut(s)	954
CseI	GACGC	2 cut(s)	322, 980
Csp6I	GTAC	1 cut(s)	828
CviAII	CATG	9 cut(s)	168, 500, 518, 896, 1009, 1321, 1422, 1443, 1501
CviQI	GTAC	1 cut(s)	828
DdeI	CTNAG	6 cut(s)	367, 407, 618, 711, 921, 1085
DpnI	GATC	5 cut(s)	188, 212, 889, 953, 1373
DpnII	GATC	5 cut(s)	186, 210, 887, 951, 1371
DraI	TTTAAA	1 cut(s)	1293
DriI	GACNNNNNGTC	1 cut(s)	631
Eam1104I	CTCTTC	3 cut(s)	109, 126, 406
Eam1105I	GACNNNNNGTC	1 cut(s)	631
EarI	CTCTTC	3 cut(s)	109, 126, 406
Eco130I	CCWWGG	2 cut(s)	499, 1416
Eco32I	GATATC	1 cut(s)	902
Eco57I	CTGAAG	4 cut(s)	286, 1095, 1249, 1416
EcoRI	GAATTC	1 cut(s)	1182
EcoRII	CCWGG	3 cut(s)	177, 319, 1621
EcoRV	GATATC	1 cut(s)	902
EcoT14I	CCWWGG	2 cut(s)	499, 1416
ErhI	CCWWGG	2 cut(s)	499, 1416
Esp3I	CGTCTC	1 cut(s)	618
FaeI	CATG	9 cut(s)	171, 503, 521, 899, 1012, 1324, 1425, 1446, 1504
FalI	AAGNNNNNCTT	2 cut(s)	1068, 1100
FatI	CATG	9 cut(s)	167, 499, 517, 895, 1008, 1320, 1421, 1442, 1500
FauI	CCCGC	1 cut(s)	1549
FauNDI	CATATG	2 cut(s)	561, 690
FbaI	TGATCA	2 cut(s)	210, 1371
FblI	GTMKAC	2 cut(s)	871, 1638
Fnu4HI	GCNGC	6 cut(s)	446, 536, 852, 1551, 1554, 1627
FokI	GGATG	6 cut(s)	73, 665, 820, 1124, 1205, 1583
Fsp4HI	GCNGC	6 cut(s)	446, 536, 852, 1551, 1554, 1627
FspBI	CTAG	3 cut(s)	594, 663, 995
GlaI	GCGC	4 cut(s)	6, 8, 990, 1230
GluI	GCNGC	6 cut(s)	446, 536, 852, 1551, 1554, 1627
HaeIII	GGCC	5 cut(s)	70, 182, 1053, 1162, 1560
HapII	CCGG	4 cut(s)	374, 770, 1190, 1300
HgaI	GACGC	2 cut(s)	322, 980
HhaI	GCGC	4 cut(s)	7, 9, 991, 1231
Hin1II	CATG	9 cut(s)	171, 503, 521, 899, 1012, 1324, 1425, 1446, 1504
Hin6I	GCGC	4 cut(s)	5, 7, 989, 1229
HinP1I	GCGC	4 cut(s)	5, 7, 989, 1229
HincII	GTYRAC	1 cut(s)	337
HindII	GTYRAC	1 cut(s)	337
HinfI	GANTC	7 cut(s)	164, 230, 292, 527, 556, 1118, 1412
HpaII	CCGG	4 cut(s)	374, 770, 1190, 1300
HphI	GGTGA	4 cut(s)	181, 355, 485, 850
Hpy166II	GTNNAC	3 cut(s)	337, 872, 1639
Hpy188I	TCNGA	7 cut(s)	174, 297, 361, 370, 1494, 1613, 1662
Hpy188III	TCNNGA	6 cut(s)	161, 256, 1073, 1190, 1267, 1375
Hpy8I	GTNNAC	3 cut(s)	337, 872, 1639
HpyAV	CCTTC	6 cut(s)	310, 592, 751, 811, 875, 1608
HpyCH4III	ACNGT	2 cut(s)	343, 1468
HpyCH4IV	ACGT	2 cut(s)	627, 930
HpyCH4V	TGCA	9 cut(s)	199, 704, 833, 972, 1307, 1320, 1484, 1520, 1629
HpyF10VI	GCNNNNNNNGC	1 cut(s)	734
HpyF3I	CTNAG	6 cut(s)	367, 407, 618, 711, 921, 1085
HpySE526I	ACGT	2 cut(s)	627, 930
Hsp92II	CATG	9 cut(s)	171, 503, 521, 899, 1012, 1324, 1425, 1446, 1504
HspAI	GCGC	4 cut(s)	5, 7, 989, 1229
Kpn2I	TCCGGA	1 cut(s)	1189
Ksp22I	TGATCA	2 cut(s)	210, 1371
KspI	CCGCGG	1 cut(s)	1557
Kzo9I	GATC	5 cut(s)	186, 210, 887, 951, 1371
LguI	GCTCTTC	1 cut(s)	109
LmnI	GCTCC	2 cut(s)	50, 427
Lsp1109I	GCAGC	3 cut(s)	522, 1537, 1613
LweI	GCATC	1 cut(s)	691
MaeI	CTAG	3 cut(s)	594, 663, 995
MaeII	ACGT	2 cut(s)	627, 930
MaeIII	GTNAC	1 cut(s)	1462
MalI	GATC	5 cut(s)	188, 212, 889, 953, 1373
MboI	GATC	5 cut(s)	186, 210, 887, 951, 1371
MfeI	CAATTG	1 cut(s)	206
MluCI	AATT	4 cut(s)	206, 283, 1182, 1479
MlyI	GAGTC	2 cut(s)	536, 1127
MroI	TCCGGA	1 cut(s)	1189
MroXI	GAANNNNTTC	2 cut(s)	27, 1653
MseI	TTAA	5 cut(s)	138, 348, 1244, 1278, 1292
MslI	CAYNNNNRTG	1 cut(s)	194
MspA1I	CMGCKG	1 cut(s)	1556
MspI	CCGG	4 cut(s)	374, 770, 1190, 1300
MspR9I	CCNGG	6 cut(s)	179, 321, 375, 771, 1300, 1623
MunI	CAATTG	1 cut(s)	206
Mva1269I	GAATGC	4 cut(s)	646, 739, 914, 1042
MvaI	CCWGG	3 cut(s)	179, 321, 1623
MvnI	CGCG	6 cut(s)	7, 19, 851, 991, 1231, 1556
MwoI	GCNNNNNNNGC	1 cut(s)	734
NciI	CCSGG	3 cut(s)	375, 771, 1300
NcoI	CCATGG	1 cut(s)	499
NdeI	CATATG	2 cut(s)	561, 690
NdeII	GATC	5 cut(s)	186, 210, 887, 951, 1371
NlaIII	CATG	9 cut(s)	171, 503, 521, 899, 1012, 1324, 1425, 1446, 1504
NlaIV	GGNNCC	1 cut(s)	1506
NspV	TTCGAA	1 cut(s)	399
PauI	GCGCGC	1 cut(s)	5
PciSI	GCTCTTC	1 cut(s)	109
PcsI	WCGNNNNNNNCGW	1 cut(s)	641
PctI	GAATGC	4 cut(s)	646, 739, 914, 1042
PdmI	GAANNNNTTC	2 cut(s)	27, 1653
PfeI	GAWTC	5 cut(s)	164, 230, 292, 556, 1412
PkrI	GCNGC	6 cut(s)	447, 537, 853, 1552, 1555, 1628
PleI	GAGTC	2 cut(s)	535, 1126
PpsI	GAGTC	2 cut(s)	535, 1126
PshBI	ATTAAT	1 cut(s)	1278
Psp1406I	AACGTT	1 cut(s)	930
Psp6I	CCWGG	3 cut(s)	177, 319, 1621
PspGI	CCWGG	3 cut(s)	177, 319, 1621
PspN4I	GGNNCC	1 cut(s)	1506
PspPI	GGNCC	3 cut(s)	181, 1051, 1558
PstNI	CAGNNNCTG	1 cut(s)	178
PteI	GCGCGC	1 cut(s)	5
RsaI	GTAC	1 cut(s)	829
RsaNI	GTAC	1 cut(s)	828
RseI	CAYNNNNRTG	1 cut(s)	194
SacII	CCGCGG	1 cut(s)	1557
SapI	GCTCTTC	1 cut(s)	109
SaqAI	TTAA	5 cut(s)	138, 348, 1244, 1278, 1292
SatI	GCNGC	6 cut(s)	446, 536, 852, 1551, 1554, 1627
Sau3AI	GATC	5 cut(s)	186, 210, 887, 951, 1371
Sau96I	GGNCC	3 cut(s)	181, 1051, 1558
ScaI	AGTACT	1 cut(s)	829
SchI	GAGTC	2 cut(s)	536, 1127
ScrFI	CCNGG	6 cut(s)	179, 321, 375, 771, 1300, 1623
SfaNI	GCATC	1 cut(s)	691
SfcI	CTRYAG	2 cut(s)	433, 1525
Sfr303I	CCGCGG	1 cut(s)	1557
SfuI	TTCGAA	1 cut(s)	399
SgrBI	CCGCGG	1 cut(s)	1557
SmiMI	CAYNNNNRTG	1 cut(s)	194
SmlI	CTYRAG	1 cut(s)	254
SmoI	CTYRAG	1 cut(s)	254
Sse9I	AATT	4 cut(s)	206, 283, 1182, 1479
SsiI	CCGC	6 cut(s)	90, 446, 805, 851, 1554, 1556
SspMI	CTAG	3 cut(s)	594, 663, 995
StyD4I	CCNGG	6 cut(s)	177, 319, 373, 769, 1298, 1621
StyI	CCWWGG	2 cut(s)	499, 1416
TaaI	ACNGT	2 cut(s)	343, 1468
TaiI	ACGT	2 cut(s)	630, 933
TaqI	TCGA	5 cut(s)	228, 399, 480, 954, 1157
TaqII	GACCGA	1 cut(s)	852
TasI	AATT	4 cut(s)	206, 283, 1182, 1479
TatI	WGTACW	1 cut(s)	827
TauI	GCSGC	3 cut(s)	448, 854, 1556
TfiI	GAWTC	5 cut(s)	164, 230, 292, 556, 1412
Tru1I	TTAA	5 cut(s)	138, 348, 1244, 1278, 1292
Tru9I	TTAA	5 cut(s)	138, 348, 1244, 1278, 1292
TscAI	CASTG	1 cut(s)	925
TseI	GCWGC	3 cut(s)	535, 1550, 1626
TspGWI	ACGGA	1 cut(s)	37
TspRI	CASTG	1 cut(s)	925
VspI	ATTAAT	1 cut(s)	1278
XapI	RAATTY	2 cut(s)	283, 1182
XmiI	GTMKAC	2 cut(s)	871, 1638
XmnI	GAANNNNTTC	2 cut(s)	27, 1653
XspI	CTAG	3 cut(s)	594, 663, 995
ZrmI	AGTACT	1 cut(s)	829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.