Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51320 |
| malus_domestica | MD15G1241200.v1.1 |
| prunus_persica | Prupe.7G172800_v2.0.a1 |
| pyrus_communis | pycom02g09790 pycom15g21270 |
| rosa_chinensis | RchiOBHm_Chr2g0098771 |
| rosa_laevigata | RLG00000016826 RLG00000037003 |
| rosa_multiflora | Rmu_sc0002776.1_g000032 Rmu_sc0004816.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00143720 |
| rosa_rugosa | Rorug02G0074800 |
| rosa_samantha | Rh2AG122400 Rh2BG126100 Rh2CG127000 Rh2DG128100 Rh7DG389800 |
| rosa_wichuraiana | Rw0G004250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 190 |
| AccIII | TCCGGA | 1 cut(s) | 148 |
| AcsI | RAATTY | 1 cut(s) | 141 |
| AcuI | CTGAAG | 3 cut(s) | 54, 208, 375 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 38, 128, 381 |
| Aor13HI | TCCGGA | 1 cut(s) | 148 |
| AoxI | GGCC | 1 cut(s) | 119 |
| ApoI | RAATTY | 1 cut(s) | 141 |
| AseI | ATTAAT | 1 cut(s) | 237 |
| AspLEI | GCGC | 1 cut(s) | 190 |
| AsuC2I | CCSGG | 1 cut(s) | 259 |
| BccI | CCATC | 2 cut(s) | 32, 80 |
| BclI | TGATCA | 1 cut(s) | 330 |
| BcnI | CCSGG | 1 cut(s) | 259 |
| BfaI | CTAG | 1 cut(s) | 195 |
| BfmI | CTRYAG | 1 cut(s) | 484 |
| BglII | AGATCT | 1 cut(s) | 418 |
| Bme1390I | CCNGG | 1 cut(s) | 259 |
| BmiI | GGNNCC | 1 cut(s) | 465 |
| BmrFI | CCNGG | 1 cut(s) | 259 |
| BpuMI | CCSGG | 1 cut(s) | 259 |
| BsaJI | CCNNGG | 2 cut(s) | 257, 375 |
| BsaWI | WCCGGW | 1 cut(s) | 148 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 38, 128, 381 |
| Bse3DI | GCAATG | 1 cut(s) | 474 |
| BseAI | TCCGGA | 1 cut(s) | 148 |
| BseDI | CCNNGG | 2 cut(s) | 257, 375 |
| BseGI | GGATG | 1 cut(s) | 157 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 38, 128, 381 |
| BseMI | GCAATG | 1 cut(s) | 474 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| Bsh1236I | CGCG | 1 cut(s) | 190 |
| BshFI | GGCC | 1 cut(s) | 121 |
| BsiSI | CCGG | 2 cut(s) | 149, 259 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 38, 128, 381 |
| BsnI | GGCC | 1 cut(s) | 121 |
| Bsp13I | TCCGGA | 1 cut(s) | 148 |
| Bsp143I | GATC | 2 cut(s) | 330, 418 |
| BspANI | GGCC | 1 cut(s) | 121 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspEI | TCCGGA | 1 cut(s) | 148 |
| BspFNI | CGCG | 1 cut(s) | 190 |
| BspLI | GGNNCC | 1 cut(s) | 465 |
| BsrDI | GCAATG | 1 cut(s) | 474 |
| BssECI | CCNNGG | 2 cut(s) | 257, 375 |
| BssMI | GATC | 2 cut(s) | 330, 418 |
| BssT1I | CCWWGG | 1 cut(s) | 375 |
| Bst4CI | ACNGT | 1 cut(s) | 427 |
| BstC8I | GCNNGC | 1 cut(s) | 192 |
| BstDEI | CTNAG | 2 cut(s) | 44, 102 |
| BstF5I | GGATG | 1 cut(s) | 157 |
| BstFNI | CGCG | 1 cut(s) | 190 |
| BstHHI | GCGC | 1 cut(s) | 190 |
| BstKTI | GATC | 2 cut(s) | 333, 421 |
| BstMBI | GATC | 2 cut(s) | 330, 418 |
| BstSCI | CCNGG | 1 cut(s) | 257 |
| BstSFI | CTRYAG | 1 cut(s) | 484 |
| BstUI | CGCG | 1 cut(s) | 190 |
| BstX2I | RGATCY | 1 cut(s) | 418 |
| BstYI | RGATCY | 1 cut(s) | 418 |
| BsuRI | GGCC | 1 cut(s) | 121 |
| BtsCI | GGATG | 1 cut(s) | 157 |
| Cac8I | GCNNGC | 1 cut(s) | 192 |
| CfoI | GCGC | 1 cut(s) | 190 |
| CviAII | CATG | 4 cut(s) | 280, 381, 402, 460 |
| CviJI | RGCY | 7 cut(s) | 48, 121, 212, 256, 284, 307, 386 |
| CviKI_1 | RGCY | 7 cut(s) | 48, 121, 212, 256, 284, 307, 386 |
| DdeI | CTNAG | 2 cut(s) | 44, 102 |
| DpnI | GATC | 2 cut(s) | 332, 420 |
| DpnII | GATC | 2 cut(s) | 330, 418 |
| DraI | TTTAAA | 1 cut(s) | 252 |
| Eco130I | CCWWGG | 1 cut(s) | 375 |
| Eco57I | CTGAAG | 3 cut(s) | 54, 208, 375 |
| EcoRI | GAATTC | 1 cut(s) | 141 |
| EcoT14I | CCWWGG | 1 cut(s) | 375 |
| ErhI | CCWWGG | 1 cut(s) | 375 |
| FaeI | CATG | 4 cut(s) | 283, 384, 405, 463 |
| FaiI | YATR | 8 cut(s) | 167, 281, 294, 382, 403, 461, 481, 486 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 27, 59 |
| FatI | CATG | 4 cut(s) | 279, 380, 401, 459 |
| FbaI | TGATCA | 1 cut(s) | 330 |
| FokI | GGATG | 1 cut(s) | 164 |
| FspBI | CTAG | 1 cut(s) | 195 |
| GlaI | GCGC | 1 cut(s) | 189 |
| HaeIII | GGCC | 1 cut(s) | 121 |
| HapII | CCGG | 2 cut(s) | 149, 259 |
| HhaI | GCGC | 1 cut(s) | 190 |
| Hin1II | CATG | 4 cut(s) | 283, 384, 405, 463 |
| Hin6I | GCGC | 1 cut(s) | 188 |
| HinP1I | GCGC | 1 cut(s) | 188 |
| HinfI | GANTC | 1 cut(s) | 77 |
| HpaII | CCGG | 2 cut(s) | 149, 259 |
| Hpy188I | TCNGA | 1 cut(s) | 453 |
| Hpy188III | TCNNGA | 3 cut(s) | 32, 149, 334 |
| HpyCH4III | ACNGT | 1 cut(s) | 427 |
| HpyCH4V | TGCA | 4 cut(s) | 266, 279, 443, 479 |
| HpyF3I | CTNAG | 2 cut(s) | 44, 102 |
| Hsp92II | CATG | 4 cut(s) | 283, 384, 405, 463 |
| HspAI | GCGC | 1 cut(s) | 188 |
| Kpn2I | TCCGGA | 1 cut(s) | 148 |
| Ksp22I | TGATCA | 1 cut(s) | 330 |
| Kzo9I | GATC | 2 cut(s) | 330, 418 |
| MaeI | CTAG | 1 cut(s) | 195 |
| MalI | GATC | 2 cut(s) | 332, 420 |
| MboI | GATC | 2 cut(s) | 330, 418 |
| MboII | GAAGA | 3 cut(s) | 47, 137, 368 |
| MflI | RGATCY | 1 cut(s) | 418 |
| MluCI | AATT | 2 cut(s) | 141, 438 |
| MlyI | GAGTC | 1 cut(s) | 86 |
| MnlI | CCTC | 7 cut(s) | 16, 111, 128, 310, 316, 340, 477 |
| MroI | TCCGGA | 1 cut(s) | 148 |
| MseI | TTAA | 3 cut(s) | 203, 237, 251 |
| MspI | CCGG | 2 cut(s) | 149, 259 |
| MspR9I | CCNGG | 1 cut(s) | 259 |
| MvnI | CGCG | 1 cut(s) | 190 |
| NciI | CCSGG | 1 cut(s) | 259 |
| NdeII | GATC | 2 cut(s) | 330, 418 |
| NlaIII | CATG | 4 cut(s) | 283, 384, 405, 463 |
| NlaIV | GGNNCC | 1 cut(s) | 465 |
| PleI | GAGTC | 1 cut(s) | 85 |
| PpsI | GAGTC | 1 cut(s) | 85 |
| PshBI | ATTAAT | 1 cut(s) | 237 |
| PspN4I | GGNNCC | 1 cut(s) | 465 |
| PsuI | RGATCY | 1 cut(s) | 418 |
| SaqAI | TTAA | 3 cut(s) | 203, 237, 251 |
| Sau3AI | GATC | 2 cut(s) | 330, 418 |
| SchI | GAGTC | 1 cut(s) | 86 |
| ScrFI | CCNGG | 1 cut(s) | 259 |
| SetI | ASST | 5 cut(s) | 70, 113, 172, 351, 469 |
| SfcI | CTRYAG | 1 cut(s) | 484 |
| Sse9I | AATT | 2 cut(s) | 141, 438 |
| SspMI | CTAG | 1 cut(s) | 195 |
| StyD4I | CCNGG | 1 cut(s) | 257 |
| StyI | CCWWGG | 1 cut(s) | 375 |
| TaaI | ACNGT | 1 cut(s) | 427 |
| TaqI | TCGA | 1 cut(s) | 116 |
| TasI | AATT | 2 cut(s) | 141, 438 |
| Tru1I | TTAA | 3 cut(s) | 203, 237, 251 |
| Tru9I | TTAA | 3 cut(s) | 203, 237, 251 |
| TspDTI | ATGAA | 3 cut(s) | 154, 168, 390 |
| VspI | ATTAAT | 1 cut(s) | 237 |
| XapI | RAATTY | 1 cut(s) | 141 |
| XspI | CTAG | 1 cut(s) | 195 |